BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00016813
         (3467 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012845534.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...  1519   0.0  
ref|XP_011078257.1| probable RNA-dependent RNA polymerase 5 [Ses...  1452   0.0  
ref|XP_011093632.1| probable RNA-dependent RNA polymerase 5 isof...  1277   0.0  
gb|PIN13666.1| RNA-directed RNA polymerase QDE-1 [Handroanthus i...  1204   0.0  
ref|XP_020553693.1| probable RNA-dependent RNA polymerase 5 isof...  1195   0.0  
ref|XP_022893343.1| probable RNA-dependent RNA polymerase 5 isof...  1062   0.0  
ref|XP_022893344.1| probable RNA-dependent RNA polymerase 5 isof...  1060   0.0  
gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]  1058   0.0  
emb|CDP03267.1| unnamed protein product [Coffea canephora]           1014   0.0  
ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polyme...   994   0.0  
ref|XP_016511895.1| PREDICTED: probable RNA-dependent RNA polyme...   991   0.0  
ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polyme...   989   0.0  
ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polyme...   988   0.0  
ref|XP_016511902.1| PREDICTED: probable RNA-dependent RNA polyme...   981   0.0  
ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polyme...   980   0.0  
ref|XP_016449580.1| PREDICTED: probable RNA-dependent RNA polyme...   961   0.0  
ref|XP_010322170.1| PREDICTED: probable RNA-dependent RNA polyme...   959   0.0  
ref|XP_015077971.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...   958   0.0  
ref|XP_009760370.1| PREDICTED: probable RNA-dependent RNA polyme...   956   0.0  
ref|XP_019239863.1| PREDICTED: probable RNA-dependent RNA polyme...   952   0.0  

>ref|XP_012845534.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            5 [Erythranthe guttata]
          Length = 1040

 Score = 1519 bits (3934), Expect = 0.0
 Identities = 763/1052 (72%), Positives = 877/1052 (83%), Gaps = 2/1052 (0%)
 Frame = -3

Query: 3333 ASPH-QEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPI 3157
            +SP+ Q++RLP+ VE TIQ IC+EK QP +KNYAR+MLAEIGEQAS+EVLT IL SN PI
Sbjct: 5    SSPYNQDIRLPKKVEMTIQTICLEKNQPPLKNYARKMLAEIGEQASMEVLTEILSSNQPI 64

Query: 3156 RSFSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQS 2977
            +SFSGFV+ +VKK+YP+ AA VLA Y+S  +SPQ+Q++WSPSSTSP    HT NGENL+S
Sbjct: 65   KSFSGFVSFMVKKDYPVQAAAVLAAYDS--SSPQSQKMWSPSSTSP----HTRNGENLES 118

Query: 2976 PLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRE 2797
            PL    + S +SNL  T PQ++ C+LSFEDET        QE +SP+     P   E +E
Sbjct: 119  PLSRLSMNSITSNLHSTSPQSVGCRLSFEDET--------QENRSPNCGTSQPSVPEVKE 170

Query: 2796 TTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAK 2617
               P+TI+QQL+ LNKLEYRKLFLVLSYIGR+KLE VVT++ ADEIYRMN+ PM+ FE K
Sbjct: 171  ---PITITQQLITLNKLEYRKLFLVLSYIGREKLEDVVTVEDADEIYRMNEFPMQAFENK 227

Query: 2616 IWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDD 2437
            IW  YGQ+F DE DRSQ+LDWDSGKTH+YYCHV +DG YYFKGPYLNS +THLQRSLGDD
Sbjct: 228  IWKKYGQRFYDESDRSQYLDWDSGKTHVYYCHVYQDGRYYFKGPYLNSMKTHLQRSLGDD 287

Query: 2436 NILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEK-TYSAVKC 2260
            NILIVKF EDGA+ T NI +EGILVGLRRY             KNQ DKE+K TYS V+C
Sbjct: 288  NILIVKFLEDGAFGTGNIAQEGILVGLRRYRFFVFKDDRKKVNKNQSDKEKKATYSNVRC 347

Query: 2259 YFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVD 2080
            +FV +DSVSP G DENYIL  KTI EAR +FMHI+T+S+IEK +AR SLILSK+IKLE++
Sbjct: 348  FFVRVDSVSPSGYDENYILSRKTIGEARRMFMHIHTISSIEKCMARLSLILSKSIKLEIN 407

Query: 2079 LAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDN 1900
            LAAVIIE IKDIP +DE G +IHDEDGKPILHTDGTGYISEDLA++C   FSA KY TD+
Sbjct: 408  LAAVIIEKIKDIPFQDEGGFVIHDEDGKPILHTDGTGYISEDLAIRCQICFSAPKYGTDD 467

Query: 1899 SFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQI 1720
             FEK+D F DF ++A Q R  E+RNKE PLL+QCR+FH+GYAVKGTLLVN+KLEPGTIQI
Sbjct: 468  RFEKNDHFADFADIASQVREAESRNKEAPLLVQCRIFHEGYAVKGTLLVNRKLEPGTIQI 527

Query: 1719 RPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMN 1540
            RPSMIKV +D    ++E FNSLEIVNISH+PGRNC SKYLIALL+YGGVPQEFFLNL+ N
Sbjct: 528  RPSMIKVERDHNIKVEEAFNSLEIVNISHKPGRNCLSKYLIALLSYGGVPQEFFLNLVAN 587

Query: 1539 ALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTK 1360
             L D RNVY+NRRAALRVASNH GLD+GF+AQRMI SGVPL+EPYLQLCLSNLE+GEKTK
Sbjct: 588  TLEDARNVYTNRRAALRVASNHAGLDYGFLAQRMICSGVPLDEPYLQLCLSNLENGEKTK 647

Query: 1359 LKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEA 1180
            LK GKIP++ESFYLMGTADPTGVLN DEVCVIL NGQISGKVLVYRNPGMHFGDVH+MEA
Sbjct: 648  LKTGKIPLNESFYLMGTADPTGVLNNDEVCVILGNGQISGKVLVYRNPGMHFGDVHVMEA 707

Query: 1179 VYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWT 1000
            VYVKE+EE VGNAKYG+FFSTKG+ SAAYEMATGDFDGDMYWVSRNPELLKYFKA KPW 
Sbjct: 708  VYVKELEEFVGNAKYGVFFSTKGATSAAYEMATGDFDGDMYWVSRNPELLKYFKASKPWK 767

Query: 999  RSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDHC 820
            R  S P S+KKNP+EFSD            EAR+PSF+MATAADSWLT+MDRLL LGD  
Sbjct: 768  RVLSAPDSKKKNPKEFSDXELENELFQLCLEARTPSFNMATAADSWLTFMDRLLTLGDDR 827

Query: 819  ATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSYRSISVL 640
              EKKSL  KMI+LVDIYYDALDAPK+G KV VP ELR +M+PHHME+G + SY S SVL
Sbjct: 828  TAEKKSLMKKMIRLVDIYYDALDAPKSGKKVKVPEELRAEMYPHHMEKGSELSYHSSSVL 887

Query: 639  GQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDESK 460
            GQIYD V A K++ VP+KEIWK+ CFDVPIPEIYV+MWK+RY++YR+EM KAL SG+ES+
Sbjct: 888  GQIYDRVDALKNDFVPRKEIWKLPCFDVPIPEIYVKMWKSRYESYRREMTKALKSGNESR 947

Query: 459  NDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMGHGVEKCGFAWRV 280
            NDAA+EVIKKYKQLLYEA DMEES K SEVIYDEAIAIYHVTYDYAM HGVEKC FAWR+
Sbjct: 948  NDAADEVIKKYKQLLYEAGDMEESAKSSEVIYDEAIAIYHVTYDYAMEHGVEKCNFAWRI 1007

Query: 279  AGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 184
            A SALC+LCAWKLAGP+EKP+ ILPS+LR+LL
Sbjct: 1008 AASALCNLCAWKLAGPREKPLPILPSLLRELL 1039


>ref|XP_011078257.1| probable RNA-dependent RNA polymerase 5 [Sesamum indicum]
          Length = 1036

 Score = 1452 bits (3758), Expect = 0.0
 Identities = 746/1052 (70%), Positives = 851/1052 (80%), Gaps = 2/1052 (0%)
 Frame = -3

Query: 3333 ASPHQEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR 3154
            +SP QEVRLP+ VE  IQRIC+EK QP +K YAR MLAEIGEQA+LEVLTT+L S T IR
Sbjct: 4    SSPDQEVRLPEPVEMIIQRICLEKNQPPLKKYARNMLAEIGEQAALEVLTTVLSSKT-IR 62

Query: 3153 SFSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQSP 2974
            SF G+VA LVKK++P  AA VL+ Y SP             STSP  SPHT   E L+SP
Sbjct: 63   SFGGYVAFLVKKDFPNQAAAVLSAYGSPHQC----------STSPNKSPHTPYYERLRSP 112

Query: 2973 LLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRET 2794
            + SF V+S  SNL++TGPQNI C LSFE+ET         EK  P  R QSPL  E RE 
Sbjct: 113  VSSFSVDSIPSNLNKTGPQNIRCNLSFENET--------LEKSCPGARCQSPLPDELREM 164

Query: 2793 TEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKI 2614
            T+ +TISQQLMIL++L++RKLFLVLSYIGRQKLEAVV LDGA+EIY M DLPM  FEAKI
Sbjct: 165  TDSVTISQQLMILSQLQFRKLFLVLSYIGRQKLEAVVNLDGANEIYSMKDLPMNDFEAKI 224

Query: 2613 WNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDN 2434
            WNSYG+KFC+E DRSQ+LDWDS KTH YYCHVC+DGSYYFKGPYLNS RTHLQRSLGDD+
Sbjct: 225  WNSYGKKFCEESDRSQYLDWDSQKTHHYYCHVCRDGSYYFKGPYLNSFRTHLQRSLGDDS 284

Query: 2433 ILIVKFSEDGAYAT-DNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCY 2257
            ILIVKF ED +     ++VEEGILVGLRRY             K QM +++ TYSAVK Y
Sbjct: 285  ILIVKFLEDDSNTMGSSVVEEGILVGLRRYRFFVFKDERKKVKKIQMVEKKSTYSAVKGY 344

Query: 2256 FVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDL 2077
            +V +DSV P+G +E YIL  KTISEAR LFMHI+T+STIEKY+ARFSLILSKT KL++D 
Sbjct: 345  YVRVDSVCPHGYEEGYILSRKTISEARRLFMHIHTVSTIEKYMARFSLILSKTRKLDIDF 404

Query: 2076 AAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNS 1897
             AV I+ I+DIP +DE+ SIIHDEDGKPILHTDGTGYIS DLAMKCP+ FS A  ITDNS
Sbjct: 405  KAVTIQRIEDIPFRDENDSIIHDEDGKPILHTDGTGYISVDLAMKCPRSFSLANDITDNS 464

Query: 1896 FEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIR 1717
            FEK+++ V+ E+ A QKRG EARNKEPPLL+QCRLF+DG AVKGTLL+N+KLEPGTIQIR
Sbjct: 465  FEKYEEIVNIEDTACQKRGAEARNKEPPLLIQCRLFYDGCAVKGTLLINRKLEPGTIQIR 524

Query: 1716 PSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNA 1537
            PSMIKV +D+  P+ ETF SLEIV  S RPGRN  SKYLIALL+YGGVPQEFF NLL NA
Sbjct: 525  PSMIKVERDQKLPLGETFKSLEIVATSRRPGRNALSKYLIALLSYGGVPQEFFCNLLTNA 584

Query: 1536 LVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKL 1357
            L +TRNVYS+ RAALRVASN+DGL+ G VA+RMISSG+PL+EPYLQ CLS+LESGEK KL
Sbjct: 585  LEETRNVYSDTRAALRVASNYDGLEVGVVARRMISSGIPLSEPYLQHCLSSLESGEKIKL 644

Query: 1356 KQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAV 1177
            KQGKIPVSESFYLMGTADPTGVL   EVCVILDNGQISGKVLVYRNPGMHFGDVH+MEAV
Sbjct: 645  KQGKIPVSESFYLMGTADPTGVLKNHEVCVILDNGQISGKVLVYRNPGMHFGDVHVMEAV 704

Query: 1176 YVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTR 997
            Y +E+EEVVGNAKYGIFFSTKG RSAAYEMATGDFDGDMYWVSRNPELLKYFKA +PW R
Sbjct: 705  YKEELEEVVGNAKYGIFFSTKGKRSAAYEMATGDFDGDMYWVSRNPELLKYFKASEPWKR 764

Query: 996  SNSVPQSEK-KNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDHC 820
              S P   K +NP+EFSD            EAR PSFSMATAADSWLT+MDRLL LGD C
Sbjct: 765  FYSTPADSKIRNPREFSDMELEHELFQLFQEAREPSFSMATAADSWLTFMDRLLTLGDDC 824

Query: 819  ATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSYRSISVL 640
            A+EK SLK K+IQL+DIYYDALDAPK+G KV VP ELR +M+PHHMERG + SY S S+L
Sbjct: 825  ASEKLSLKKKIIQLIDIYYDALDAPKSGKKVKVPNELRAEMYPHHMERGAEFSYNSSSIL 884

Query: 639  GQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDESK 460
            G+IYD VQAFK++AVP KEIWK+   D PIPE+Y++ WKARY +YR+EM  A+ S DESK
Sbjct: 885  GRIYDKVQAFKNDAVPGKEIWKLPFLDDPIPELYLK-WKARYKDYREEMTSAMKSSDESK 943

Query: 459  NDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMGHGVEKCGFAWRV 280
            + AA +VI KYKQLLYEAP MEES K++E IY+E++AIYHV YDYAM HGV +C FAW+V
Sbjct: 944  DLAARDVIHKYKQLLYEAPCMEESAKNTEEIYEESVAIYHVVYDYAMRHGVTRCSFAWKV 1003

Query: 279  AGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 184
            AGSALC LCAWKLAGPKE+PI ILPSVLR+LL
Sbjct: 1004 AGSALCDLCAWKLAGPKEEPIAILPSVLRELL 1035


>ref|XP_011093632.1| probable RNA-dependent RNA polymerase 5 isoform X1 [Sesamum indicum]
          Length = 1013

 Score = 1277 bits (3304), Expect = 0.0
 Identities = 649/1055 (61%), Positives = 796/1055 (75%), Gaps = 2/1055 (0%)
 Frame = -3

Query: 3339 MGASPHQEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTP 3160
            M  SPHQE  LP S+E TIQ+IC ++ QP I +YAR++LA+IGE+A+ ++L  I  SN  
Sbjct: 1    MDGSPHQEAPLPHSIEKTIQKICKDQSQPPISSYARKLLADIGEKAASDLLARI--SNQR 58

Query: 3159 I-RSFSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENL 2983
            I +SFSG++  LVKK +P V             S  ++R  SPSS+SP       N    
Sbjct: 59   ITKSFSGYIITLVKKYHPAVVP-----------SSPSKRSLSPSSSSPR------NTSLK 101

Query: 2982 QSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGER 2803
            +SPL                   I   LSFED+  E R  + + + S +V  ++    E 
Sbjct: 102  KSPL------------------QIGRLLSFEDDVQETRGPIFEHQTSTAVELKN---SEL 140

Query: 2802 RETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFE 2623
            R  T+  TISQQL IL+KLEYRKLFLVLSY GR KLE V+T+DGA++I++  DLPM +FE
Sbjct: 141  RGMTKSNTISQQLRILSKLEYRKLFLVLSYTGRHKLENVMTVDGANDIFQKKDLPMSIFE 200

Query: 2622 AKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLG 2443
              IWN+YG K+C++ DRS++LDWD GKTHLYYC+V +DGSY+FKGP L+S+RTHLQRSLG
Sbjct: 201  TAIWNTYGNKYCNKSDRSEYLDWDFGKTHLYYCYVHEDGSYHFKGPCLSSTRTHLQRSLG 260

Query: 2442 DDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVK 2263
            DDNILIVKF ED  Y   NIVEEGILVGLRR+             KNQ++ E+    AVK
Sbjct: 261  DDNILIVKFLEDDMYGV-NIVEEGILVGLRRFRFLVFKDERKGRKKNQIENEKAYSCAVK 319

Query: 2262 CYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEV 2083
            C FV IDSV P   D NYIL GK++ E R LFMH++T+ T+EKY+ARFSLILSKTIKL+V
Sbjct: 320  CLFVRIDSVDPVE-DNNYILSGKSVGEVRRLFMHVHTVLTMEKYMARFSLILSKTIKLQV 378

Query: 2082 DLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITD 1903
            D  A+ +E I+DIP +D+ GS+I DEDGKP+LHTDGTGYISEDLAMKCPK+FSAAKYITD
Sbjct: 379  DFGAITVETIQDIPFRDDSGSLICDEDGKPLLHTDGTGYISEDLAMKCPKEFSAAKYITD 438

Query: 1902 NSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQ 1723
            NSFE + +FVD ++ + Q R  ++RNKE PLLMQCRLF++G AVKGTLLVNKKL+ G IQ
Sbjct: 439  NSFETYHEFVDIDDASCQTRLAKSRNKEAPLLMQCRLFYNGCAVKGTLLVNKKLKLGEIQ 498

Query: 1722 IRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLM 1543
            IRPSMIKV +D T+P++  FNSLEIV ISH+PGR   SK LI+LLNYGGVPQ+ FL LL 
Sbjct: 499  IRPSMIKVERDCTAPVQGNFNSLEIVAISHKPGRTFLSKTLISLLNYGGVPQQVFLELLT 558

Query: 1542 NALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKT 1363
            NAL DT+ VYSNR AALRVASNHDGLDFG++AQ MIS G+PLNEPYL  CL NL+  E+ 
Sbjct: 559  NALEDTQKVYSNRHAALRVASNHDGLDFGYLAQLMISCGIPLNEPYLNHCLCNLKKDERA 618

Query: 1362 KLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIME 1183
            KL++GK+PV ESFYLMGTADPTGVL  D+VCV+LDNGQISGKVLVYRNPG+HFGD+H+ME
Sbjct: 619  KLRKGKVPVGESFYLMGTADPTGVLEYDQVCVVLDNGQISGKVLVYRNPGLHFGDIHVME 678

Query: 1182 AVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPW 1003
            A+YV+++E+ +G++KYGIFFSTKG RSA YEMATGDFDGDMYWVSR+ ELLK FKA +PW
Sbjct: 679  AIYVQQLEDYIGDSKYGIFFSTKGGRSAPYEMATGDFDGDMYWVSRHHELLKNFKASEPW 738

Query: 1002 TRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDH 823
             R  S  +S  KNP+E S             +AR PSF M+TAADSWL +MDRLL LGD 
Sbjct: 739  ARVYSTKESNSKNPKELSSEELERELFRLFLQARKPSFEMSTAADSWLAFMDRLLTLGDD 798

Query: 822  CATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSYRSISV 643
               EK  L++KMI L+DIYYDALDAPK+G +V +P ELR +M+PHHMERG + SY S+S+
Sbjct: 799  RTFEKDCLREKMIHLIDIYYDALDAPKSGKRVNLPKELRPEMYPHHMERGPEYSYHSMSI 858

Query: 642  LGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDES 463
            LG+IYDM++ FK E VP+KEIWK+ CFD+PIPE Y++ W+  Y+NYR+EMAKALNS  ES
Sbjct: 859  LGRIYDMIEEFKDEVVPKKEIWKLPCFDIPIPETYIQKWRINYENYRREMAKALNSNYES 918

Query: 462  KNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMG-HGVEKCGFAW 286
            K DAAN+VIKK K+ LY+APDMEES KD+ VIY EA+AIYHVTYDYA     + KC FAW
Sbjct: 919  KKDAANDVIKKNKEFLYDAPDMEESSKDTTVIYKEALAIYHVTYDYAKSMDDIGKCSFAW 978

Query: 285  RVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLLN 181
            +V GSALC+L AWK AGPKEKP+ ILPSV+R++LN
Sbjct: 979  KVGGSALCNLYAWKTAGPKEKPLTILPSVIREVLN 1013


>gb|PIN13666.1| RNA-directed RNA polymerase QDE-1 [Handroanthus impetiginosus]
          Length = 1014

 Score = 1204 bits (3116), Expect = 0.0
 Identities = 623/1057 (58%), Positives = 774/1057 (73%), Gaps = 4/1057 (0%)
 Frame = -3

Query: 3339 MGASPHQEVR--LPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSN 3166
            M ASP +E +  LPQSVE  I  IC ++ QP + N  R +LAEIGE+A+LE+L  I   N
Sbjct: 1    MEASPRKEAQCPLPQSVEKIIVDICNDQSQPLLPNAVRRLLAEIGEKAALELLLRIKGQN 60

Query: 3165 TPIRSFSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGEN 2986
               +SFSG+V  L+KK +P +       + SP  SP  +R  SPS +SP  SP       
Sbjct: 61   IT-KSFSGYVITLLKKYHPSL-------FPSPSNSPN-KRPLSPSCSSPNSSP------- 104

Query: 2985 LQSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGE 2806
                            L ++ PQ IS   S  DE          + K P+V  +S   GE
Sbjct: 105  ----------------LKKSPPQ-ISRMQSLRDEA--------LDWKGPNVAPESSSTGE 139

Query: 2805 RRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVF 2626
             +E T   TIS+QL IL+KLEYRKLFLVLSYIGRQKLE V+T+DG ++I    DL M  F
Sbjct: 140  LKEMTNRATISEQLKILSKLEYRKLFLVLSYIGRQKLEDVMTIDGTNDIVNKKDLQMTTF 199

Query: 2625 EAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSL 2446
            EA+IW +YG K+CD  DR Q+L+WDSGKT+ YYC+V +DGSY+F+GP LN++R HLQR L
Sbjct: 200  EAEIWKTYGNKYCDRSDRRQYLNWDSGKTYFYYCYVHQDGSYHFEGPSLNNTRNHLQRVL 259

Query: 2445 GDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAV 2266
            GD+N+LIVKF  D  +    I  EGILVG RR+             KNQ + E+K  SAV
Sbjct: 260  GDENVLIVKFLGDDIHGFYTIEREGILVGPRRFQFLVFKDEQNRHKKNQTE-EKKATSAV 318

Query: 2265 KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLE 2086
            K +FV I  V P   D+ YIL GK+I EAR LFMH++ + T+EKY+ARFSL+LS TIKL+
Sbjct: 319  KAHFVRIGYVEPKFEDKTYILSGKSIGEARRLFMHVHKVLTMEKYMARFSLVLSTTIKLQ 378

Query: 2085 VDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYIT 1906
            ++   V +E I+DIP +D+ GS++ DEDG  ++HTDGTG+ISEDLAM CP+DFS AKYIT
Sbjct: 379  INFGDVKVETIEDIPFRDDSGSLVRDEDGDLLIHTDGTGFISEDLAMNCPEDFSVAKYIT 438

Query: 1905 DNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTI 1726
            DNSFE +    D ++++ Q R  + R+KEPPLLMQCRLF++G AVKGTLL+NKKL+PG I
Sbjct: 439  DNSFETY-HVTDSKDISCQTRPPKPRSKEPPLLMQCRLFYNGMAVKGTLLLNKKLKPGVI 497

Query: 1725 QIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLL 1546
            Q+RPSMIKV      P++E FNSLEIV++SHRP R   SK LI LL YG VP +FFLNLL
Sbjct: 498  QVRPSMIKVRGGSELPVEEKFNSLEIVDVSHRPHRTYLSKMLICLLTYGEVPPQFFLNLL 557

Query: 1545 MNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEK 1366
             NAL DT+ V S++R+AL+VASN DGLD+GF AQ MIS G+PLNEPYLQ CL NL    K
Sbjct: 558  TNALEDTQKVCSDKRSALKVASNQDGLDYGFAAQIMISCGIPLNEPYLQHCLRNLRKDGK 617

Query: 1365 TKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIM 1186
            +KLK+GKIP+SESFYLMGTADPTGVL+  +VCVILDNGQ+SGKVLVYRNPG+HFGD+H+M
Sbjct: 618  SKLKKGKIPISESFYLMGTADPTGVLDNGQVCVILDNGQLSGKVLVYRNPGLHFGDIHVM 677

Query: 1185 EAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKP 1006
            EAVYVKE+EE VGN+KYGIFFSTKGS+SAAYEMATGDFDGDMYW+SR+PELL++FK  +P
Sbjct: 678  EAVYVKELEEYVGNSKYGIFFSTKGSKSAAYEMATGDFDGDMYWISRHPELLRHFKTSEP 737

Query: 1005 WTRSNSVPQ-SEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILG 829
            W RS S    S  + PQE S             EAR PSF M +AA+SWL +MDRLL LG
Sbjct: 738  WRRSCSTTMPSNSRKPQELSSEELEHELFRRYIEARRPSFDMPSAANSWLAFMDRLLTLG 797

Query: 828  DHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSYRSI 649
            DH A+EK  L+ K+IQL+DIYYDA+DAPK+G +V  P  L+ +M+PHHMERG + SY S 
Sbjct: 798  DHRASEKNCLRKKIIQLIDIYYDAIDAPKSGKRVHFPNNLKAEMYPHHMERGPEYSYHSS 857

Query: 648  SVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGD 469
            S+LGQIYD+++ +K EAVP+ EIWK+ CFD+P PEIY++ WK +Y++YRKEM  ALNSG 
Sbjct: 858  SILGQIYDIIEGYKDEAVPKTEIWKLPCFDLPTPEIYIDKWKTKYEDYRKEMTAALNSGH 917

Query: 468  ESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEKCGF 292
            ESKNDAAN+VIKKYKQLLY+AP+MEES KD+ VIY+EA+AIYHVTYDYA   +   KC F
Sbjct: 918  ESKNDAANDVIKKYKQLLYDAPEMEESTKDTTVIYEEALAIYHVTYDYAKSANDCSKCNF 977

Query: 291  AWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLLN 181
            AW+VAGSALC+LCAWK AGPKEKP++I+PSVLRD+LN
Sbjct: 978  AWKVAGSALCNLCAWKTAGPKEKPLMIVPSVLRDVLN 1014


>ref|XP_020553693.1| probable RNA-dependent RNA polymerase 5 isoform X2 [Sesamum indicum]
          Length = 871

 Score = 1195 bits (3092), Expect = 0.0
 Identities = 583/872 (66%), Positives = 703/872 (80%), Gaps = 1/872 (0%)
 Frame = -3

Query: 2793 TEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKI 2614
            T+  TISQQL IL+KLEYRKLFLVLSY GR KLE V+T+DGA++I++  DLPM +FE  I
Sbjct: 2    TKSNTISQQLRILSKLEYRKLFLVLSYTGRHKLENVMTVDGANDIFQKKDLPMSIFETAI 61

Query: 2613 WNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDN 2434
            WN+YG K+C++ DRS++LDWD GKTHLYYC+V +DGSY+FKGP L+S+RTHLQRSLGDDN
Sbjct: 62   WNTYGNKYCNKSDRSEYLDWDFGKTHLYYCYVHEDGSYHFKGPCLSSTRTHLQRSLGDDN 121

Query: 2433 ILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCYF 2254
            ILIVKF ED  Y   NIVEEGILVGLRR+             KNQ++ E+    AVKC F
Sbjct: 122  ILIVKFLEDDMYGV-NIVEEGILVGLRRFRFLVFKDERKGRKKNQIENEKAYSCAVKCLF 180

Query: 2253 VHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDLA 2074
            V IDSV P   D NYIL GK++ E R LFMH++T+ T+EKY+ARFSLILSKTIKL+VD  
Sbjct: 181  VRIDSVDPVE-DNNYILSGKSVGEVRRLFMHVHTVLTMEKYMARFSLILSKTIKLQVDFG 239

Query: 2073 AVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNSF 1894
            A+ +E I+DIP +D+ GS+I DEDGKP+LHTDGTGYISEDLAMKCPK+FSAAKYITDNSF
Sbjct: 240  AITVETIQDIPFRDDSGSLICDEDGKPLLHTDGTGYISEDLAMKCPKEFSAAKYITDNSF 299

Query: 1893 EKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIRP 1714
            E + +FVD ++ + Q R  ++RNKE PLLMQCRLF++G AVKGTLLVNKKL+ G IQIRP
Sbjct: 300  ETYHEFVDIDDASCQTRLAKSRNKEAPLLMQCRLFYNGCAVKGTLLVNKKLKLGEIQIRP 359

Query: 1713 SMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNAL 1534
            SMIKV +D T+P++  FNSLEIV ISH+PGR   SK LI+LLNYGGVPQ+ FL LL NAL
Sbjct: 360  SMIKVERDCTAPVQGNFNSLEIVAISHKPGRTFLSKTLISLLNYGGVPQQVFLELLTNAL 419

Query: 1533 VDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLK 1354
             DT+ VYSNR AALRVASNHDGLDFG++AQ MIS G+PLNEPYL  CL NL+  E+ KL+
Sbjct: 420  EDTQKVYSNRHAALRVASNHDGLDFGYLAQLMISCGIPLNEPYLNHCLCNLKKDERAKLR 479

Query: 1353 QGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVY 1174
            +GK+PV ESFYLMGTADPTGVL  D+VCV+LDNGQISGKVLVYRNPG+HFGD+H+MEA+Y
Sbjct: 480  KGKVPVGESFYLMGTADPTGVLEYDQVCVVLDNGQISGKVLVYRNPGLHFGDIHVMEAIY 539

Query: 1173 VKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRS 994
            V+++E+ +G++KYGIFFSTKG RSA YEMATGDFDGDMYWVSR+ ELLK FKA +PW R 
Sbjct: 540  VQQLEDYIGDSKYGIFFSTKGGRSAPYEMATGDFDGDMYWVSRHHELLKNFKASEPWARV 599

Query: 993  NSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDHCAT 814
             S  +S  KNP+E S             +AR PSF M+TAADSWL +MDRLL LGD    
Sbjct: 600  YSTKESNSKNPKELSSEELERELFRLFLQARKPSFEMSTAADSWLAFMDRLLTLGDDRTF 659

Query: 813  EKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSYRSISVLGQ 634
            EK  L++KMI L+DIYYDALDAPK+G +V +P ELR +M+PHHMERG + SY S+S+LG+
Sbjct: 660  EKDCLREKMIHLIDIYYDALDAPKSGKRVNLPKELRPEMYPHHMERGPEYSYHSMSILGR 719

Query: 633  IYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDESKND 454
            IYDM++ FK E VP+KEIWK+ CFD+PIPE Y++ W+  Y+NYR+EMAKALNS  ESK D
Sbjct: 720  IYDMIEEFKDEVVPKKEIWKLPCFDIPIPETYIQKWRINYENYRREMAKALNSNYESKKD 779

Query: 453  AANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMG-HGVEKCGFAWRVA 277
            AAN+VIKK K+ LY+APDMEES KD+ VIY EA+AIYHVTYDYA     + KC FAW+V 
Sbjct: 780  AANDVIKKNKEFLYDAPDMEESSKDTTVIYKEALAIYHVTYDYAKSMDDIGKCSFAWKVG 839

Query: 276  GSALCSLCAWKLAGPKEKPIVILPSVLRDLLN 181
            GSALC+L AWK AGPKEKP+ ILPSV+R++LN
Sbjct: 840  GSALCNLYAWKTAGPKEKPLTILPSVIREVLN 871


>ref|XP_022893343.1| probable RNA-dependent RNA polymerase 5 isoform X1 [Olea europaea
            var. sylvestris]
          Length = 897

 Score = 1062 bits (2746), Expect = 0.0
 Identities = 554/927 (59%), Positives = 685/927 (73%), Gaps = 2/927 (0%)
 Frame = -3

Query: 2958 VESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETTEPMT 2779
            V SPSS+ ++  P+    QL ++ E         +E+ SP  +     A E  E T  + 
Sbjct: 4    VNSPSSSREKAVPRTTKGQLLYKHEA--------EERTSPQ-KSNCQFASEISERTRSL- 53

Query: 2778 ISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWNSYG 2599
                L ILNKLE+R+LFLVLSYIG +KLE V+TLD  ++I  M D PM  FE+KIW+SYG
Sbjct: 54   ----LQILNKLEFRRLFLVLSYIGSKKLETVMTLDDVNDILSMKDRPMTYFESKIWDSYG 109

Query: 2598 QKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVK 2419
            + F ++ DRS++ DWD GKTH Y C+V +DGS  FKGPYL+   TH+QRSLG+ N++ VK
Sbjct: 110  RLFYEKSDRSEYSDWDCGKTHSYNCYVNQDGSLQFKGPYLSVPNTHMQRSLGEHNVMTVK 169

Query: 2418 FSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEK-TYSAVKCYFVHID 2242
            F  DG   TD   +EGILVGLRR+             K  + +E+K T S +KCYFV + 
Sbjct: 170  FLGDGMCGTD---KEGILVGLRRFRFFVFKDERKRKKKTSIKEEKKSTDSDLKCYFVELS 226

Query: 2241 SVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDLAAVII 2062
                          GK ISE R LFMHI+T+S+IEK +ARFSLILSKTIKL+VDL AV I
Sbjct: 227  --------------GKKISELRRLFMHIHTVSSIEKCMARFSLILSKTIKLQVDLDAVEI 272

Query: 2061 EIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNSFEKHD 1882
            + I+DIP  DE+ S+I DEDGKP+LHTDGTGYISE+LAM+CPKD   AKY+ D    K  
Sbjct: 273  QRIEDIPFLDENDSVIFDEDGKPLLHTDGTGYISENLAMQCPKDLCRAKYMKDEDLLK-- 330

Query: 1881 QFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIRPSMIK 1702
               DFE+V+ Q++GT+A N+EPPLLMQ RLF++G AVKGTLLVNKKL+PG +QIRPSMIK
Sbjct: 331  -ICDFEDVSRQQKGTKAGNREPPLLMQVRLFYNGCAVKGTLLVNKKLQPGIVQIRPSMIK 389

Query: 1701 VVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNALVDTR 1522
            V  D T P+  TFNSLEIV +SH+PGR  FSKYLIALL+YGGVP EFFLNL+ ++L + +
Sbjct: 390  VETDPTLPVGRTFNSLEIVAVSHKPGRTFFSKYLIALLSYGGVPGEFFLNLVTHSLEEAQ 449

Query: 1521 NVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKI 1342
            NVYSNR AALRVASNH+G+D GF+AQRM+SSG+PL+EPYLQ CLS L   +K KLK G+I
Sbjct: 450  NVYSNRIAALRVASNHEGMDDGFMAQRMLSSGIPLSEPYLQQCLSRLVKDDKAKLKTGRI 509

Query: 1341 PVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEM 1162
            P+SESFY+MGTADPTG LN D+VCVIL++GQISGKVLVYRNPG+HFGD+HI++AVYV+E+
Sbjct: 510  PISESFYVMGTADPTGRLNNDQVCVILESGQISGKVLVYRNPGLHFGDIHILDAVYVEEL 569

Query: 1161 EEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVP 982
            +EVVGNAKYGIFFSTKG RSAAYE+ATGDFDGDMYWVSRNPELL YFKA +PW+R +S P
Sbjct: 570  QEVVGNAKYGIFFSTKGGRSAAYEIATGDFDGDMYWVSRNPELLTYFKASEPWSRVHSTP 629

Query: 981  QSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDHCATEKKS 802
             S K NP E S+            +AR P++ MATAADSWLT MD+LL+L D  A +K  
Sbjct: 630  DSHKINPLELSEEELEREFFRLFSQARKPTYDMATAADSWLTNMDQLLMLSDDSAFKKDD 689

Query: 801  LKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSYRSISVLGQIYDM 622
            L+ K+IQL+DIYYDALDAPK+G  V VP  L+   +PH+MERG   +Y S S+LGQIYD 
Sbjct: 690  LRRKIIQLIDIYYDALDAPKSGKNVKVPNHLKAKSYPHYMERGPRFTYHSTSILGQIYDR 749

Query: 621  VQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDESKNDAANE 442
            V+  K++  P  EI K+ CFDV IPE+Y+ MWK RYD YR +M +ALNS  ESKN AA+E
Sbjct: 750  VEESKTDHFPTIEISKLPCFDVEIPEMYLNMWKDRYDEYRMDMTRALNSRGESKNAAADE 809

Query: 441  VIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEKCGFAWRVAGSAL 265
            VI+KYKQLLY+A DMEES K +E I  EA+AIYHVTYD+A   +   KC F W VAG+AL
Sbjct: 810  VIRKYKQLLYDASDMEESAKKTEEIEMEALAIYHVTYDFAKKRNDPGKCKFVWNVAGAAL 869

Query: 264  CSLCAWKLAGPKEKPIVILPSVLRDLL 184
            C+L + K+AGP E+PIVIL S+LRD+L
Sbjct: 870  CNLHSQKMAGPNERPIVILSSLLRDIL 896


>ref|XP_022893344.1| probable RNA-dependent RNA polymerase 5 isoform X2 [Olea europaea
            var. sylvestris]
          Length = 896

 Score = 1060 bits (2741), Expect = 0.0
 Identities = 553/927 (59%), Positives = 684/927 (73%), Gaps = 2/927 (0%)
 Frame = -3

Query: 2958 VESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETTEPMT 2779
            V SPSS+ ++  P+    QL ++ E         +E+ SP  +     A E  E T  + 
Sbjct: 4    VNSPSSSREKAVPRTTKGQLLYKHEA--------EERTSPQ-KSNCQFASEISERTRSL- 53

Query: 2778 ISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWNSYG 2599
                L ILNKLE+R+LFLVLSYIG +KLE V+TLD  ++I  M D PM  FE+KIW+SYG
Sbjct: 54   ----LQILNKLEFRRLFLVLSYIGSKKLETVMTLDDVNDILSMKDRPMTYFESKIWDSYG 109

Query: 2598 QKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVK 2419
            + F ++ DRS++ DWD GKTH Y C+V +DGS  FKGPYL+   TH+QRSLG+ N++ VK
Sbjct: 110  RLFYEKSDRSEYSDWDCGKTHSYNCYVNQDGSLQFKGPYLSVPNTHMQRSLGEHNVMTVK 169

Query: 2418 FSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEK-TYSAVKCYFVHID 2242
            F  DG   TD   +EGILVGLRR+             K  + +E+K T S +KCYFV + 
Sbjct: 170  FLGDGMCGTD---KEGILVGLRRFRFFVFKDERKRKKKTSIKEEKKSTDSDLKCYFVELS 226

Query: 2241 SVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDLAAVII 2062
                          GK ISE R LFMHI+T+S+IEK +ARFSLILSKTIKL+VDL AV I
Sbjct: 227  --------------GKKISELRRLFMHIHTVSSIEKCMARFSLILSKTIKLQVDLDAVEI 272

Query: 2061 EIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNSFEKHD 1882
            + I+DIP  DE+ S+I DEDGKP+LHTDGTGYISE+LAM+CPKD   AKY+ D       
Sbjct: 273  QRIEDIPFLDENDSVIFDEDGKPLLHTDGTGYISENLAMQCPKDLCRAKYMKDEDL---- 328

Query: 1881 QFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIRPSMIK 1702
               DFE+V+ Q++GT+A N+EPPLLMQ RLF++G AVKGTLLVNKKL+PG +QIRPSMIK
Sbjct: 329  LICDFEDVSRQQKGTKAGNREPPLLMQVRLFYNGCAVKGTLLVNKKLQPGIVQIRPSMIK 388

Query: 1701 VVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNALVDTR 1522
            V  D T P+  TFNSLEIV +SH+PGR  FSKYLIALL+YGGVP EFFLNL+ ++L + +
Sbjct: 389  VETDPTLPVGRTFNSLEIVAVSHKPGRTFFSKYLIALLSYGGVPGEFFLNLVTHSLEEAQ 448

Query: 1521 NVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKI 1342
            NVYSNR AALRVASNH+G+D GF+AQRM+SSG+PL+EPYLQ CLS L   +K KLK G+I
Sbjct: 449  NVYSNRIAALRVASNHEGMDDGFMAQRMLSSGIPLSEPYLQQCLSRLVKDDKAKLKTGRI 508

Query: 1341 PVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEM 1162
            P+SESFY+MGTADPTG LN D+VCVIL++GQISGKVLVYRNPG+HFGD+HI++AVYV+E+
Sbjct: 509  PISESFYVMGTADPTGRLNNDQVCVILESGQISGKVLVYRNPGLHFGDIHILDAVYVEEL 568

Query: 1161 EEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVP 982
            +EVVGNAKYGIFFSTKG RSAAYE+ATGDFDGDMYWVSRNPELL YFKA +PW+R +S P
Sbjct: 569  QEVVGNAKYGIFFSTKGGRSAAYEIATGDFDGDMYWVSRNPELLTYFKASEPWSRVHSTP 628

Query: 981  QSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDHCATEKKS 802
             S K NP E S+            +AR P++ MATAADSWLT MD+LL+L D  A +K  
Sbjct: 629  DSHKINPLELSEEELEREFFRLFSQARKPTYDMATAADSWLTNMDQLLMLSDDSAFKKDD 688

Query: 801  LKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSYRSISVLGQIYDM 622
            L+ K+IQL+DIYYDALDAPK+G  V VP  L+   +PH+MERG   +Y S S+LGQIYD 
Sbjct: 689  LRRKIIQLIDIYYDALDAPKSGKNVKVPNHLKAKSYPHYMERGPRFTYHSTSILGQIYDR 748

Query: 621  VQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDESKNDAANE 442
            V+  K++  P  EI K+ CFDV IPE+Y+ MWK RYD YR +M +ALNS  ESKN AA+E
Sbjct: 749  VEESKTDHFPTIEISKLPCFDVEIPEMYLNMWKDRYDEYRMDMTRALNSRGESKNAAADE 808

Query: 441  VIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEKCGFAWRVAGSAL 265
            VI+KYKQLLY+A DMEES K +E I  EA+AIYHVTYD+A   +   KC F W VAG+AL
Sbjct: 809  VIRKYKQLLYDASDMEESAKKTEEIEMEALAIYHVTYDFAKKRNDPGKCKFVWNVAGAAL 868

Query: 264  CSLCAWKLAGPKEKPIVILPSVLRDLL 184
            C+L + K+AGP E+PIVIL S+LRD+L
Sbjct: 869  CNLHSQKMAGPNERPIVILSSLLRDIL 895


>gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]
          Length = 898

 Score = 1058 bits (2737), Expect = 0.0
 Identities = 557/923 (60%), Positives = 672/923 (72%), Gaps = 4/923 (0%)
 Frame = -3

Query: 3342 KMGASPHQEVRLPQSVEATIQRICVEKKQPAIKNYA--REMLAEIGEQASLEVLTTILFS 3169
            KM  S H++VRLP+SVEA I+RI VEK+QP +   +  R+ML EIGEQ SL++L  I  S
Sbjct: 7    KMDGSSHEDVRLPESVEAAIERIAVEKQQPPLPRNSDVRKMLREIGEQPSLKLLNIIHSS 66

Query: 3168 NTPIRSFSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGE 2989
             TPI+SF GFV+ LV+  YP  AA + + Y+SP   P T  I+SPSS SP ++    NGE
Sbjct: 67   KTPIKSFGGFVSKLVRTYYPNQAAAIPSPYKSP---PPT--IYSPSSISPNVAR---NGE 118

Query: 2988 NLQSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAG 2809
            +LQS L         SNL  TG QNISCQLSFEDE  E R+                   
Sbjct: 119  SLQSSL---------SNLQGTGFQNISCQLSFEDEALESRN------------------- 150

Query: 2808 ERRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKV 2629
                  E M IS QL+ LNKLE+RKLFL+LSY   QKLE V+T + A+++Y    LPM  
Sbjct: 151  ------ESMAISPQLLTLNKLEFRKLFLLLSYANGQKLEDVLTTEEANQVYANKALPMPE 204

Query: 2628 FEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRS 2449
            FE  IW+ +G ++C+  DRSQ LDWDSGKTH+Y CHV  DGSY FKGPYLNSSRTHLQRS
Sbjct: 205  FERLIWDKFGYRYCNGLDRSQHLDWDSGKTHIYNCHVNPDGSYSFKGPYLNSSRTHLQRS 264

Query: 2448 LGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSA 2269
            LGDDN+L VKF     Y    IVEEG++VGLRRY             KNQ +  + ++SA
Sbjct: 265  LGDDNVLTVKFLAKEIYPARKIVEEGLIVGLRRYRFFVFKDEQKKAKKNQAEDNKSSHSA 324

Query: 2268 VKCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKL 2089
            VKCYFVH+DS+S    +E+Y+L+ K++SEAR LFMHI+TLSTIEKY+AR SLILSKT ++
Sbjct: 325  VKCYFVHLDSISSNDHEEDYVLFRKSVSEARRLFMHIHTLSTIEKYMARLSLILSKTTRI 384

Query: 2088 EVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYI 1909
            ++D AA+I+EII+DIP +D++GSII DEDGKPILHTDGTGYIS+DLAMKC KDF A+ + 
Sbjct: 385  DLDFAAIIVEIIEDIPFQDDNGSIIRDEDGKPILHTDGTGYISQDLAMKCSKDFYASMHN 444

Query: 1908 TDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGT 1729
            T+++FE                         PLL+QCRLFHDGYAVKGTLLVN+KLEPG 
Sbjct: 445  TNSTFE-------------------------PLLIQCRLFHDGYAVKGTLLVNRKLEPGR 479

Query: 1728 IQIRPSMIKVVKDRTSPMKET--FNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFL 1555
            IQIRPSMIKV KD +   +E   FNSLEI  IS RP RN  SKYLI+LL+YGGVPQEFFL
Sbjct: 480  IQIRPSMIKVEKDHSMESEEILKFNSLEINTISRRPNRNFLSKYLISLLSYGGVPQEFFL 539

Query: 1554 NLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLES 1375
            NLL  AL +T+NVYSNRR ALRVAS+HD  D G +AQRMI  G+PL+EPYLQ CLS LES
Sbjct: 540  NLLFKALEETQNVYSNRRVALRVASHHDDWDLGLMAQRMICCGIPLDEPYLQHCLSKLES 599

Query: 1374 GEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDV 1195
             +K KLK+G+IPV ES YLMGTADPTGVL+ DEVCVILD+GQISGKVLVYRNPGMHFGD+
Sbjct: 600  SQKKKLKEGRIPVDESCYLMGTADPTGVLHNDEVCVILDSGQISGKVLVYRNPGMHFGDI 659

Query: 1194 HIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKA 1015
            H+MEAVYVK +EE +GNAKYGIFFSTKG RSAAYE+ATGDFDGD YWVSRNPELL +FKA
Sbjct: 660  HVMEAVYVKGLEEFIGNAKYGIFFSTKGQRSAAYEIATGDFDGDTYWVSRNPELLTFFKA 719

Query: 1014 HKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLI 835
             +PW R    P +EK++P++FS             ++R+PS++M TAADSWLTYMDRLL 
Sbjct: 720  SEPWKRVYPAPDAEKRDPRKFSSSELERELFQLFLDSRTPSYNMGTAADSWLTYMDRLLT 779

Query: 834  LGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSYR 655
            LGD  A EK SLK KMI+LVDIYYDALDAPK+G K+ VP +L+ ++FPHHME+ ++ SY 
Sbjct: 780  LGDDRAAEKNSLKTKMIKLVDIYYDALDAPKSGKKINVPDDLKAELFPHHMEKAIEKSYH 839

Query: 654  SISVLGQIYDMVQAFKSEAVPQK 586
            S S+LGQIYD V  F S+AV +K
Sbjct: 840  SSSILGQIYDNVLEFNSDAVSRK 862


>emb|CDP03267.1| unnamed protein product [Coffea canephora]
          Length = 1019

 Score = 1014 bits (2623), Expect = 0.0
 Identities = 549/1068 (51%), Positives = 722/1068 (67%), Gaps = 15/1068 (1%)
 Frame = -3

Query: 3339 MGASPHQEVR----LPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILF 3172
            MG+S   ++R    L + VE  I++IC+EK+QP   +YAR+ L +IGE+ + E++  I +
Sbjct: 1    MGSSLQTQLRGSVSLSEPVERMIEQICIEKQQPPPDHYARQRLFDIGEEKAYEIVRRIYY 60

Query: 3171 SNTPIRS-FSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLN 2995
            S   IR+  S ++                   +SPQ SP  Q   +PS  +P    H  +
Sbjct: 61   SEEAIRTTLSRYITWFT---------------DSPQ-SPFRQSSSTPSPRTPPPQLHASS 104

Query: 2994 GENLQSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPL 2815
                ++  L FP   P+               S  DE+P              +   SPL
Sbjct: 105  SPPKRA--LHFPPPPPTC-------------FSQCDESPCS--------PMSKLNMSSPL 141

Query: 2814 AGERRETTEPMTISQQLMILNKLEYRKLFLVLSYIGR---QKLEAVVTLDGADEIYRMND 2644
                       T + QL +L++LE+RK FL+ SYIGR    KLE V+T + A++I  M +
Sbjct: 142  PHPESARPSQTTHNYQLTVLSQLEFRKFFLLYSYIGRLVLSKLEEVITTENANKILEMKN 201

Query: 2643 LPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRT 2464
            LPM V+E+ IW+  G++ C   DR + +DWDSGKTH YYCHV +DGSY FKGPYL + RT
Sbjct: 202  LPMGVYESCIWDMCGKQLCAPSDRIEVIDWDSGKTHFYYCHVYEDGSYCFKGPYLKTIRT 261

Query: 2463 HLQRSLGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQ--MDK 2290
            HLQR+LGDDN+LIV+F +DG   +D I+E+GI+VGLRRY             K +  ++K
Sbjct: 262  HLQRALGDDNVLIVRFVDDGKCNSDRIIEDGIIVGLRRYRFFAFKDECKDAKKKKKGLEK 321

Query: 2289 EEKTYSAV-KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSL 2113
             +   SA  KCYFV  DS++  G DE Y+L    ++EAR LFM +N++S++ KYIARFSL
Sbjct: 322  NKTPLSAFPKCYFVRFDSIATSGTDEPYLLSSLEVNEARRLFMDVNSISSMAKYIARFSL 381

Query: 2112 ILSKTIKLEVDLAAVIIE-IIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCP 1936
            ILSKTIKL VDL++V+I+  I+DI  +D +   I D++G+P++HTDGTG+ISEDLA+KCP
Sbjct: 382  ILSKTIKLPVDLSSVVIDDTIQDIECRDGNNRPIKDDNGEPLIHTDGTGFISEDLALKCP 441

Query: 1935 KDFSAAKYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLL 1756
            +DF  A+YI D  F+K   FV F +  F  RGTEARN++PPLLMQCRLF  G AVKGTLL
Sbjct: 442  QDFGRAQYIKDKDFQKFHNFVGFVDAPFDVRGTEARNRDPPLLMQCRLFSQGLAVKGTLL 501

Query: 1755 VNKKLEPGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGG 1576
            VNKKL+ GTIQIRPSMIKV KDR  P+ +TF+SLEIV +SHRP R   SKYLIALL+YGG
Sbjct: 502  VNKKLKAGTIQIRPSMIKVQKDREGPIGQTFDSLEIVAVSHRPRRCHLSKYLIALLSYGG 561

Query: 1575 VPQEFFLNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQL 1396
            VP+ FF++L+ + L +T  V++++RAA +VA + +G      A R++ +G+PLNEP+LQ 
Sbjct: 562  VPRTFFVDLMTSVLEETNAVFTDKRAAFKVALHQEGFYDAGGALRLLLAGIPLNEPHLQK 621

Query: 1395 CLSNLESGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNP 1216
             LS L + E+T LK+GKIP+SESFYLMGTADPTG+L  +EVCV+LDNGQ+SGKVL+YRNP
Sbjct: 622  RLSELANNERTLLKEGKIPISESFYLMGTADPTGLLKENEVCVVLDNGQVSGKVLLYRNP 681

Query: 1215 GMHFGDVHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPE 1036
            G+HFGDVH++EAVYV  +E+++GNAKYGIFFSTKG RS A E+A GDFDGDMYWVSRNP+
Sbjct: 682  GLHFGDVHVLEAVYVPALEDIIGNAKYGIFFSTKGRRSVASEIANGDFDGDMYWVSRNPQ 741

Query: 1035 LLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLT 856
            LLKYF A  PWTR     ++E+KNP E+S               + PS++MA AADSWL 
Sbjct: 742  LLKYFSASPPWTRVYPSLRAERKNPNEYS--AEQLEHELFRHFLKKPSYNMAVAADSWLA 799

Query: 855  YMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMER 676
            +MDRLLILGD  A EK +LK+ M++L+DIYYDALDAPK G KV VP EL+ + FPH+M  
Sbjct: 800  FMDRLLILGDDNAKEKDALKENMLKLIDIYYDALDAPKRGTKVIVPEELKAERFPHYM-- 857

Query: 675  GLDSSYRSISVLGQIYDMVQAFKSEAVPQK--EIWKMSCFDVPIPEIYVEMWKARYDNYR 502
            G D SYRS SVLG IYD  +AF+SE   Q+   I K+ CFDV +P+ Y+  W+ RY+ YR
Sbjct: 858  GKDGSYRSTSVLGDIYDRAEAFQSE---QRCIAIEKLPCFDVEVPQNYLSSWRGRYNEYR 914

Query: 501  KEMAKALNSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA 322
            KEM  AL   DES+NDAA++VIKKYK+LLYEA + EES KD + I+ EA+A+Y VTYDYA
Sbjct: 915  KEMNVALQKDDESRNDAADDVIKKYKRLLYEAAEFEESKKDVQEIHKEALALYQVTYDYA 974

Query: 321  MG-HGVEKCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLLN 181
            +      KCGFAW+ AGSAL S  A    G  E+ + + PS LR+L +
Sbjct: 975  ISTKDAGKCGFAWKAAGSALLSYFA---TGRNERLVPVSPSALRELFS 1019


>ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana sylvestris]
 ref|XP_016454732.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana tabacum]
          Length = 1023

 Score =  994 bits (2571), Expect = 0.0
 Identities = 546/1057 (51%), Positives = 710/1057 (67%), Gaps = 12/1057 (1%)
 Frame = -3

Query: 3318 EVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSG 3142
            E  LP S+EA +++IC E+ Q       R  L  IGEQ SL +L  I  S   IR + S 
Sbjct: 20   EAPLPSSIEAMLRKICSEQCQEPPDAGIRRRLGSIGEQGSLAILRII--STRAIRKTLSA 77

Query: 3141 FVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQSPLLSF 2962
            F+  L+ + YP   ++      SP ASPQ +       TSP + P T   + +Q    S 
Sbjct: 78   FLVYLMDR-YPDCLSS------SPFASPQKR-------TSPSLLP-TPESKRVQGESSSK 122

Query: 2961 PVESPSSN--LDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETTE 2788
            P     S+  +    PQ +  QLSF DE             SP    ++P          
Sbjct: 123  PKPKIGSSPCVQFASPQRVIRQLSFGDEP------------SPESNCRTP---------- 160

Query: 2787 PMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWN 2608
             + ISQQLMIL +LE+RKLFLVLSYIG +KLE V++   AD+I R   LPM  FE++IWN
Sbjct: 161  SLNISQQLMILGELEFRKLFLVLSYIGSKKLEDVISPKIADDIVRKKTLPMTDFESEIWN 220

Query: 2607 SYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNIL 2428
            ++G+    E DRS++LDWD GKTHLYYCH+ ++G   FKGPYLN++RTHLQR+LGD+N+L
Sbjct: 221  AFGKACYTESDRSKYLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDENVL 280

Query: 2427 IVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAV------ 2266
            IVKF ED   A + IVEEGILVG RRY                 DKE K   A+      
Sbjct: 281  IVKFVEDACCA-NIIVEEGILVGFRRYRFFVYKD----------DKERKKTPAIMKTKTA 329

Query: 2265 --KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIK 2092
              KCYFV  +S+  Y    +Y+  G+  SEARC FMH++ +S + KY AR SLILSKTIK
Sbjct: 330  SLKCYFVRFESIETYNHGGSYVFAGRRTSEARCHFMHVHMVSNMAKYAARLSLILSKTIK 389

Query: 2091 LEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKY 1912
            L+V+LA+V IE ++DI  +DE G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A+Y
Sbjct: 390  LQVNLASVTIERVEDILCRDESGCIICDEDGEPCIHTDGTGFISEDLAMRCPKDFSKAEY 449

Query: 1911 ITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPG 1732
            I D ++E     VD E++  ++RG  + NKEPPLLMQCRL+ +G AVKGT L+N+K+   
Sbjct: 450  IKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCRLYKNGCAVKGTFLINRKIGSR 509

Query: 1731 TIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLN 1552
             IQIRPSM+KV  D T     TFNSLE+V IS+RP +   SK+LI+LL+YGGV +EFF+ 
Sbjct: 510  KIQIRPSMVKVETDPTISSLPTFNSLEVVAISNRPRKTYLSKHLISLLSYGGVGREFFME 569

Query: 1551 LLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESG 1372
            +L +AL +T+ VY  +RAAL+VA N+  +D   +A RMISSGVPLNEP+L   LS L   
Sbjct: 570  ILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARMISSGVPLNEPHLHARLSRLAKI 629

Query: 1371 EKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVH 1192
            E++KL+ GK+P+S+SFYLMGTADPTGVL  +EVCVILD+GQ+SG+VLVYRNPG+HFGDVH
Sbjct: 630  ERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGDVH 689

Query: 1191 IMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAH 1012
            +M+A YV+E+ ++VG+AKYGI FSTKG RSAA E+A GDFDGDMYWVS N +L+  ++A 
Sbjct: 690  VMKARYVEELVDIVGDAKYGIVFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYRAS 749

Query: 1011 KPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLIL 832
            KPWTR++S P++  K P EFS              A+S   SM+ AADSWL +MDRLL+L
Sbjct: 750  KPWTRTHSTPKAVSKKPTEFSADELEYELFRQFLRAKSKGASMSVAADSWLAFMDRLLML 809

Query: 831  GDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSYRS 652
             D  A    SLK KM+ L+DIYYDALDAPK+G KV +P +L+ + FPH+MERG   SY S
Sbjct: 810  RDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSYHS 869

Query: 651  ISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSG 472
             S+LGQIYD V ++  E +   EI K+ CFDV IP+    +W+ RY+ Y+K+M  A+NSG
Sbjct: 870  TSILGQIYDYVDSYPDEDLCITEISKLPCFDVEIPDECTTLWRERYEEYKKDMTMAMNSG 929

Query: 471  DESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEKCG 295
             E KN A NEVIKKYK+LLY AP+ E+S + +E I++EA+A+YHVTYD A + + +EKCG
Sbjct: 930  CEVKNSACNEVIKKYKKLLYGAPEFEQSVRKTEDIFNEALALYHVTYDNARITYSIEKCG 989

Query: 294  FAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 184
            FAW+VAGSALC + A      KE    ILPS+L+D+L
Sbjct: 990  FAWKVAGSALCRIHAMY---QKENAFPILPSILQDIL 1023


>ref|XP_016511895.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana tabacum]
          Length = 1020

 Score =  991 bits (2562), Expect = 0.0
 Identities = 548/1060 (51%), Positives = 708/1060 (66%), Gaps = 15/1060 (1%)
 Frame = -3

Query: 3318 EVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSG 3142
            E  LP SVEA +++IC E+ Q       R  L  IGEQ SL +L  I  S+ PIR + S 
Sbjct: 17   EAPLPSSVEAMLRKICSEQCQEPPDVGIRRRLGSIGEQGSLAILRII--SSRPIRKTLSA 74

Query: 3141 FVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISP----HTLNGENLQSP 2974
            F+  L+ + YP   ++      SP ASPQ +       TSP + P      + GE+   P
Sbjct: 75   FLVYLMDR-YPDCLSS------SPFASPQKR-------TSPSLLPTPESKRVQGESSTKP 120

Query: 2973 LLSFPVESPSSNLDRTGPQNISCQLSFEDE-TPEKRSYVIQEKKSPSVRRQSPLAGERRE 2797
                P    S  +    P  +  +LSF DE +PE            + R  SP       
Sbjct: 121  K---PKIGSSPCVQFASPHRVVRRLSFRDEPSPES-----------NCRTPSP------- 159

Query: 2796 TTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAK 2617
                  ISQQLMIL +LE+RKLFLVLSYIG +KLE V++   AD+I R   LPM  FE++
Sbjct: 160  -----NISQQLMILRELEFRKLFLVLSYIGSKKLEDVISPKIADDIVRKKTLPMTDFESE 214

Query: 2616 IWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDD 2437
            IWN++G+    E DRS++LDWD GKTHLYYCH+ ++G   FKGPYLN++RTHLQR+LGD+
Sbjct: 215  IWNAFGKACYAESDRSKYLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDE 274

Query: 2436 NILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAV--- 2266
            N+LIVKF ED   A + IVEEGILVG RRY                 DKE K   A+   
Sbjct: 275  NVLIVKFVEDACCA-NIIVEEGILVGFRRYRFFVYKD----------DKERKKTPAIMKT 323

Query: 2265 -----KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSK 2101
                 KCYFV  +S+  Y    +Y+   K  SEARC FMH++ +S + KY AR SLILSK
Sbjct: 324  KTASLKCYFVRFESIETYNHGGSYVFAAKRTSEARCHFMHVHMVSNMAKYAARLSLILSK 383

Query: 2100 TIKLEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSA 1921
            TIKL+V+LA+V IE ++DI  +DE G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS 
Sbjct: 384  TIKLQVNLASVTIERVEDILCRDESGCIICDEDGEPRIHTDGTGFISEDLAMRCPKDFSK 443

Query: 1920 AKYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKL 1741
            A+YI D ++E     VD E++  ++RG  + NKEPPLLMQCRLF +G AVKGT LVN+K+
Sbjct: 444  AEYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCRLFKNGCAVKGTFLVNRKI 503

Query: 1740 EPGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEF 1561
                IQIRPSM+KV  D T     TFNSLE+V ISHRP +   SK+LI+LL+YGGV  EF
Sbjct: 504  GSRKIQIRPSMVKVETDPTISALPTFNSLEVVAISHRPRKTYLSKHLISLLSYGGVGNEF 563

Query: 1560 FLNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNL 1381
            F+ +L +AL +T+ VY  +RAAL+VA N+  +D   +A R+ISSGVPLNEP+L   LS L
Sbjct: 564  FMEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARLISSGVPLNEPHLHARLSRL 623

Query: 1380 ESGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFG 1201
               E++KL+ GK+P+S+SFYLMGTADPTGVL  +EVCVILD+GQ+SG+VLVYRNPG+HFG
Sbjct: 624  AKIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFG 683

Query: 1200 DVHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYF 1021
            DVH+M+A YV+E+ ++VG+AKYGIFFSTKG RSAA E+A GDFDGDMYWVS N +L+  +
Sbjct: 684  DVHVMKARYVEELVDIVGDAKYGIFFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSY 743

Query: 1020 KAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRL 841
            +A KPWTR +S P++  K P EFS              A+S   SM+ AADSWL +MDRL
Sbjct: 744  RASKPWTRMHSTPKAVSKKPTEFSADELEYELFRQFLGAKSKGASMSVAADSWLAFMDRL 803

Query: 840  LILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSS 661
            L+L D       SLK K++ L+DIYYDALDAPK+G KV +P +L+ + FPH+MERG   S
Sbjct: 804  LMLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFS 863

Query: 660  YRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKAL 481
            Y S S+LGQIYD V ++  E +   EI K+ CFDV IP+  + +W  RY+ Y+K+M  A+
Sbjct: 864  YHSTSILGQIYDYVDSYPDEDLCITEISKLPCFDVEIPDECMALWGERYEEYKKDMTMAM 923

Query: 480  NSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVE 304
            NSG E KN A NEVIKKYK+LLY AP+ E+S + ++ I++EA+A+YHVTYD A + + +E
Sbjct: 924  NSGCEVKNSACNEVIKKYKKLLYGAPEFEQSARKTKDIFNEALALYHVTYDNARITYSIE 983

Query: 303  KCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 184
            KCGFAW+VAGSALC + A      KE    ILPS+L+D+L
Sbjct: 984  KCGFAWKVAGSALCRIHAMY---HKENAFPILPSILQDIL 1020


>ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1020

 Score =  989 bits (2558), Expect = 0.0
 Identities = 546/1059 (51%), Positives = 706/1059 (66%), Gaps = 14/1059 (1%)
 Frame = -3

Query: 3318 EVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSG 3142
            E  LP SVEA +++IC E+ Q       R  L  IGEQ SL +L  I  S+ PIR + S 
Sbjct: 17   EAPLPSSVEAMLRKICSEQCQEPPDVGIRRRLGSIGEQGSLTILRII--SSRPIRKTLSA 74

Query: 3141 FVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISP----HTLNGENLQSP 2974
            F+  L+ + YP   ++      SP ASPQ +       TSP + P      + GE+   P
Sbjct: 75   FLVYLMDR-YPDCLSS------SPFASPQKR-------TSPSLLPTPESKRVQGESSTKP 120

Query: 2973 LLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRET 2794
                P    S  +    P  +  QLSF DE             SP    ++P        
Sbjct: 121  K---PKIGSSPCVQFASPHRVVRQLSFRDEP------------SPESNCRTP-------- 157

Query: 2793 TEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKI 2614
              P  ISQQLMIL++LE+RKLFLVLSYIG + LE V++   AD+I R   LPM  FE++I
Sbjct: 158  --PPNISQQLMILSELEFRKLFLVLSYIGSKTLEDVISPKIADDIVRKKTLPMTDFESEI 215

Query: 2613 WNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDN 2434
            WN++G+    E DRS++LDWD GKTHLYYCH+ ++G   FKGPYLN++RTHLQR+LGD+N
Sbjct: 216  WNAFGKACYAESDRSKYLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDEN 275

Query: 2433 ILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAV---- 2266
            +LIVKF ED   A + IVEEGILVG RRY                 DKE K   A+    
Sbjct: 276  VLIVKFVEDACCA-NIIVEEGILVGFRRYRFFVYKD----------DKERKKTPAIMKTK 324

Query: 2265 ----KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKT 2098
                KCYFV  +S+  Y    +Y+   K  SEARC FMH++ +S + KY AR SLILSKT
Sbjct: 325  TASLKCYFVRFESIETYNHGGSYVFAAKRTSEARCHFMHVHMVSNMAKYAARLSLILSKT 384

Query: 2097 IKLEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAA 1918
            IKL+V+LA+V IE ++DI  +DE G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A
Sbjct: 385  IKLQVNLASVTIERVEDILCRDESGCIICDEDGEPRIHTDGTGFISEDLAMRCPKDFSKA 444

Query: 1917 KYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLE 1738
            +YI D ++E     VD E++  ++RG  + NKEPPLLMQCRLF +G AVKGT LVN+K+ 
Sbjct: 445  EYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCRLFKNGCAVKGTFLVNRKIG 504

Query: 1737 PGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFF 1558
               IQIRPSM+KV  D T     TFNSLE+V ISHRP +   SK+LI+LL+YGGV  EFF
Sbjct: 505  SRKIQIRPSMVKVETDPTISALPTFNSLEVVAISHRPRKTYLSKHLISLLSYGGVGNEFF 564

Query: 1557 LNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLE 1378
            + +L +AL +T+ VY  +RAAL+VA N+  +D   +A R+ISSGVPLNEP+L   LS L 
Sbjct: 565  MEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARLISSGVPLNEPHLHARLSRLA 624

Query: 1377 SGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGD 1198
              E++KL+ GK+P+S+SFYLMGTADPTGVL  +EVCVILD+GQ+SG+VLVYRNPG+HFGD
Sbjct: 625  KIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGD 684

Query: 1197 VHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFK 1018
            VH+M+A YV+E+ ++VG+AKYGIFFSTKG RSAA E+A GDFDGDMYWVS N +L+  ++
Sbjct: 685  VHVMKARYVEELVDIVGDAKYGIFFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYR 744

Query: 1017 AHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLL 838
            A KPWTR +S P++  K P EFS              A+S   SM+ AADSWL +MD LL
Sbjct: 745  ASKPWTRMHSTPKAVSKKPTEFSADELEYELFRQFLGAKSKGASMSVAADSWLAFMDLLL 804

Query: 837  ILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSY 658
            +L D       SLK K++ L+DIYYDALDAPK+G KV +P +L+ + FPH+MERG   SY
Sbjct: 805  MLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSY 864

Query: 657  RSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALN 478
             S S+LGQIYD V ++  E +   EI K+ CFDV IP+  + +W  RY+ Y+K+M  A+N
Sbjct: 865  HSTSILGQIYDYVDSYPDEDLCITEISKLPCFDVEIPDECMALWGERYEEYKKDMTMAMN 924

Query: 477  SGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEK 301
            SG E KN A NEVIKKYK+LLY AP+ E+S + ++ I++EA+A+YHVTYD A + + +EK
Sbjct: 925  SGCEVKNSACNEVIKKYKKLLYGAPEFEQSVRKTKDIFNEALALYHVTYDNARITYSIEK 984

Query: 300  CGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 184
            CGFAW+VAGSALC + A      KE    ILPS+L+D+L
Sbjct: 985  CGFAWKVAGSALCRIHAMY---HKENAFPILPSILQDIL 1020


>ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana sylvestris]
 ref|XP_016454733.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana tabacum]
          Length = 1021

 Score =  988 bits (2553), Expect = 0.0
 Identities = 545/1057 (51%), Positives = 708/1057 (66%), Gaps = 12/1057 (1%)
 Frame = -3

Query: 3318 EVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSG 3142
            E  LP S+EA +++IC E+ Q       R  L  IGEQ SL +L  I  S   IR + S 
Sbjct: 20   EAPLPSSIEAMLRKICSEQCQEPPDAGIRRRLGSIGEQGSLAILRII--STRAIRKTLSA 77

Query: 3141 FVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQSPLLSF 2962
            F+  L+ + YP   ++      SP ASPQ +       TSP + P T   + +Q    S 
Sbjct: 78   FLVYLMDR-YPDCLSS------SPFASPQKR-------TSPSLLP-TPESKRVQGESSSK 122

Query: 2961 PVESPSSN--LDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETTE 2788
            P     S+  +    PQ +  QLSF DE             SP    ++P          
Sbjct: 123  PKPKIGSSPCVQFASPQRVIRQLSFGDEP------------SPESNCRTP---------- 160

Query: 2787 PMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWN 2608
             + ISQQLMIL +LE+RKLFLVLSYIG +KLE V++   AD+I R   LPM  FE++IWN
Sbjct: 161  SLNISQQLMILGELEFRKLFLVLSYIGSKKLEDVISPKIADDIVRKKTLPMTDFESEIWN 220

Query: 2607 SYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNIL 2428
            ++G+    E DRS++LDWD GKTHLYYCH+ ++G   FKGPYLN++RTHLQR+LGD+N+L
Sbjct: 221  AFGKACYTESDRSKYLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDENVL 280

Query: 2427 IVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAV------ 2266
            IVKF ED   A + IVEEGILVG RRY                 DKE K   A+      
Sbjct: 281  IVKFVEDACCA-NIIVEEGILVGFRRYRFFVYKD----------DKERKKTPAIMKTKTA 329

Query: 2265 --KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIK 2092
              KCYFV  +S+  Y    +Y+  G+  SEARC FMH++ +S + KY AR SLILSKTIK
Sbjct: 330  SLKCYFVRFESIETYNHGGSYVFAGRRTSEARCHFMHVHMVSNMAKYAARLSLILSKTIK 389

Query: 2091 LEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKY 1912
            L+V+LA+V IE ++DI  +DE G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A+Y
Sbjct: 390  LQVNLASVTIERVEDILCRDESGCIICDEDGEPCIHTDGTGFISEDLAMRCPKDFSKAEY 449

Query: 1911 ITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPG 1732
            I D ++E     VD E++  ++RG  + NKEPPLLMQCRL+ +G AVKGT L+N+K+   
Sbjct: 450  IKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCRLYKNGCAVKGTFLINRKIGSR 509

Query: 1731 TIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLN 1552
             IQIRPSM+KV  D T     TFNSLE+V I  RP +   SK+LI+LL+YGGV +EFF+ 
Sbjct: 510  KIQIRPSMVKVETDPTISSLPTFNSLEVVAI--RPRKTYLSKHLISLLSYGGVGREFFME 567

Query: 1551 LLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESG 1372
            +L +AL +T+ VY  +RAAL+VA N+  +D   +A RMISSGVPLNEP+L   LS L   
Sbjct: 568  ILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARMISSGVPLNEPHLHARLSRLAKI 627

Query: 1371 EKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVH 1192
            E++KL+ GK+P+S+SFYLMGTADPTGVL  +EVCVILD+GQ+SG+VLVYRNPG+HFGDVH
Sbjct: 628  ERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGDVH 687

Query: 1191 IMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAH 1012
            +M+A YV+E+ ++VG+AKYGI FSTKG RSAA E+A GDFDGDMYWVS N +L+  ++A 
Sbjct: 688  VMKARYVEELVDIVGDAKYGIVFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYRAS 747

Query: 1011 KPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLIL 832
            KPWTR++S P++  K P EFS              A+S   SM+ AADSWL +MDRLL+L
Sbjct: 748  KPWTRTHSTPKAVSKKPTEFSADELEYELFRQFLRAKSKGASMSVAADSWLAFMDRLLML 807

Query: 831  GDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSYRS 652
             D  A    SLK KM+ L+DIYYDALDAPK+G KV +P +L+ + FPH+MERG   SY S
Sbjct: 808  RDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSYHS 867

Query: 651  ISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSG 472
             S+LGQIYD V ++  E +   EI K+ CFDV IP+    +W+ RY+ Y+K+M  A+NSG
Sbjct: 868  TSILGQIYDYVDSYPDEDLCITEISKLPCFDVEIPDECTTLWRERYEEYKKDMTMAMNSG 927

Query: 471  DESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEKCG 295
             E KN A NEVIKKYK+LLY AP+ E+S + +E I++EA+A+YHVTYD A + + +EKCG
Sbjct: 928  CEVKNSACNEVIKKYKKLLYGAPEFEQSVRKTEDIFNEALALYHVTYDNARITYSIEKCG 987

Query: 294  FAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 184
            FAW+VAGSALC + A      KE    ILPS+L+D+L
Sbjct: 988  FAWKVAGSALCRIHAMY---QKENAFPILPSILQDIL 1021


>ref|XP_016511902.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana tabacum]
          Length = 1018

 Score =  981 bits (2537), Expect = 0.0
 Identities = 546/1060 (51%), Positives = 706/1060 (66%), Gaps = 15/1060 (1%)
 Frame = -3

Query: 3318 EVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSG 3142
            E  LP SVEA +++IC E+ Q       R  L  IGEQ SL +L  I  S+ PIR + S 
Sbjct: 17   EAPLPSSVEAMLRKICSEQCQEPPDVGIRRRLGSIGEQGSLAILRII--SSRPIRKTLSA 74

Query: 3141 FVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISP----HTLNGENLQSP 2974
            F+  L+ + YP   ++      SP ASPQ +       TSP + P      + GE+   P
Sbjct: 75   FLVYLMDR-YPDCLSS------SPFASPQKR-------TSPSLLPTPESKRVQGESSTKP 120

Query: 2973 LLSFPVESPSSNLDRTGPQNISCQLSFEDE-TPEKRSYVIQEKKSPSVRRQSPLAGERRE 2797
                P    S  +    P  +  +LSF DE +PE            + R  SP       
Sbjct: 121  K---PKIGSSPCVQFASPHRVVRRLSFRDEPSPES-----------NCRTPSP------- 159

Query: 2796 TTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAK 2617
                  ISQQLMIL +LE+RKLFLVLSYIG +KLE V++   AD+I R   LPM  FE++
Sbjct: 160  -----NISQQLMILRELEFRKLFLVLSYIGSKKLEDVISPKIADDIVRKKTLPMTDFESE 214

Query: 2616 IWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDD 2437
            IWN++G+    E DRS++LDWD GKTHLYYCH+ ++G   FKGPYLN++RTHLQR+LGD+
Sbjct: 215  IWNAFGKACYAESDRSKYLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDE 274

Query: 2436 NILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAV--- 2266
            N+LIVKF ED   A + IVEEGILVG RRY                 DKE K   A+   
Sbjct: 275  NVLIVKFVEDACCA-NIIVEEGILVGFRRYRFFVYKD----------DKERKKTPAIMKT 323

Query: 2265 -----KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSK 2101
                 KCYFV  +S+  Y    +Y+   K  SEARC FMH++ +S + KY AR SLILSK
Sbjct: 324  KTASLKCYFVRFESIETYNHGGSYVFAAKRTSEARCHFMHVHMVSNMAKYAARLSLILSK 383

Query: 2100 TIKLEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSA 1921
            TIKL+V+LA+V IE ++DI  +DE G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS 
Sbjct: 384  TIKLQVNLASVTIERVEDILCRDESGCIICDEDGEPRIHTDGTGFISEDLAMRCPKDFSK 443

Query: 1920 AKYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKL 1741
            A+YI D ++E     VD E++  ++RG  + NKEPPLLMQCRLF +G AVKGT LVN+K+
Sbjct: 444  AEYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCRLFKNGCAVKGTFLVNRKI 503

Query: 1740 EPGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEF 1561
                IQIRPSM+KV  D T     TFNSLE+V I  RP +   SK+LI+LL+YGGV  EF
Sbjct: 504  GSRKIQIRPSMVKVETDPTISALPTFNSLEVVAI--RPRKTYLSKHLISLLSYGGVGNEF 561

Query: 1560 FLNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNL 1381
            F+ +L +AL +T+ VY  +RAAL+VA N+  +D   +A R+ISSGVPLNEP+L   LS L
Sbjct: 562  FMEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARLISSGVPLNEPHLHARLSRL 621

Query: 1380 ESGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFG 1201
               E++KL+ GK+P+S+SFYLMGTADPTGVL  +EVCVILD+GQ+SG+VLVYRNPG+HFG
Sbjct: 622  AKIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFG 681

Query: 1200 DVHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYF 1021
            DVH+M+A YV+E+ ++VG+AKYGIFFSTKG RSAA E+A GDFDGDMYWVS N +L+  +
Sbjct: 682  DVHVMKARYVEELVDIVGDAKYGIFFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSY 741

Query: 1020 KAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRL 841
            +A KPWTR +S P++  K P EFS              A+S   SM+ AADSWL +MDRL
Sbjct: 742  RASKPWTRMHSTPKAVSKKPTEFSADELEYELFRQFLGAKSKGASMSVAADSWLAFMDRL 801

Query: 840  LILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSS 661
            L+L D       SLK K++ L+DIYYDALDAPK+G KV +P +L+ + FPH+MERG   S
Sbjct: 802  LMLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFS 861

Query: 660  YRSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKAL 481
            Y S S+LGQIYD V ++  E +   EI K+ CFDV IP+  + +W  RY+ Y+K+M  A+
Sbjct: 862  YHSTSILGQIYDYVDSYPDEDLCITEISKLPCFDVEIPDECMALWGERYEEYKKDMTMAM 921

Query: 480  NSGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVE 304
            NSG E KN A NEVIKKYK+LLY AP+ E+S + ++ I++EA+A+YHVTYD A + + +E
Sbjct: 922  NSGCEVKNSACNEVIKKYKKLLYGAPEFEQSARKTKDIFNEALALYHVTYDNARITYSIE 981

Query: 303  KCGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 184
            KCGFAW+VAGSALC + A      KE    ILPS+L+D+L
Sbjct: 982  KCGFAWKVAGSALCRIHAMY---HKENAFPILPSILQDIL 1018


>ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1018

 Score =  980 bits (2533), Expect = 0.0
 Identities = 544/1059 (51%), Positives = 704/1059 (66%), Gaps = 14/1059 (1%)
 Frame = -3

Query: 3318 EVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSG 3142
            E  LP SVEA +++IC E+ Q       R  L  IGEQ SL +L  I  S+ PIR + S 
Sbjct: 17   EAPLPSSVEAMLRKICSEQCQEPPDVGIRRRLGSIGEQGSLTILRII--SSRPIRKTLSA 74

Query: 3141 FVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISP----HTLNGENLQSP 2974
            F+  L+ + YP   ++      SP ASPQ +       TSP + P      + GE+   P
Sbjct: 75   FLVYLMDR-YPDCLSS------SPFASPQKR-------TSPSLLPTPESKRVQGESSTKP 120

Query: 2973 LLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRET 2794
                P    S  +    P  +  QLSF DE             SP    ++P        
Sbjct: 121  K---PKIGSSPCVQFASPHRVVRQLSFRDEP------------SPESNCRTP-------- 157

Query: 2793 TEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKI 2614
              P  ISQQLMIL++LE+RKLFLVLSYIG + LE V++   AD+I R   LPM  FE++I
Sbjct: 158  --PPNISQQLMILSELEFRKLFLVLSYIGSKTLEDVISPKIADDIVRKKTLPMTDFESEI 215

Query: 2613 WNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDN 2434
            WN++G+    E DRS++LDWD GKTHLYYCH+ ++G   FKGPYLN++RTHLQR+LGD+N
Sbjct: 216  WNAFGKACYAESDRSKYLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDEN 275

Query: 2433 ILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAV---- 2266
            +LIVKF ED   A + IVEEGILVG RRY                 DKE K   A+    
Sbjct: 276  VLIVKFVEDACCA-NIIVEEGILVGFRRYRFFVYKD----------DKERKKTPAIMKTK 324

Query: 2265 ----KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKT 2098
                KCYFV  +S+  Y    +Y+   K  SEARC FMH++ +S + KY AR SLILSKT
Sbjct: 325  TASLKCYFVRFESIETYNHGGSYVFAAKRTSEARCHFMHVHMVSNMAKYAARLSLILSKT 384

Query: 2097 IKLEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAA 1918
            IKL+V+LA+V IE ++DI  +DE G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A
Sbjct: 385  IKLQVNLASVTIERVEDILCRDESGCIICDEDGEPRIHTDGTGFISEDLAMRCPKDFSKA 444

Query: 1917 KYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLE 1738
            +YI D ++E     VD E++  ++RG  + NKEPPLLMQCRLF +G AVKGT LVN+K+ 
Sbjct: 445  EYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCRLFKNGCAVKGTFLVNRKIG 504

Query: 1737 PGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFF 1558
               IQIRPSM+KV  D T     TFNSLE+V I  RP +   SK+LI+LL+YGGV  EFF
Sbjct: 505  SRKIQIRPSMVKVETDPTISALPTFNSLEVVAI--RPRKTYLSKHLISLLSYGGVGNEFF 562

Query: 1557 LNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLE 1378
            + +L +AL +T+ VY  +RAAL+VA N+  +D   +A R+ISSGVPLNEP+L   LS L 
Sbjct: 563  MEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARLISSGVPLNEPHLHARLSRLA 622

Query: 1377 SGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGD 1198
              E++KL+ GK+P+S+SFYLMGTADPTGVL  +EVCVILD+GQ+SG+VLVYRNPG+HFGD
Sbjct: 623  KIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGD 682

Query: 1197 VHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFK 1018
            VH+M+A YV+E+ ++VG+AKYGIFFSTKG RSAA E+A GDFDGDMYWVS N +L+  ++
Sbjct: 683  VHVMKARYVEELVDIVGDAKYGIFFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYR 742

Query: 1017 AHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLL 838
            A KPWTR +S P++  K P EFS              A+S   SM+ AADSWL +MD LL
Sbjct: 743  ASKPWTRMHSTPKAVSKKPTEFSADELEYELFRQFLGAKSKGASMSVAADSWLAFMDLLL 802

Query: 837  ILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSY 658
            +L D       SLK K++ L+DIYYDALDAPK+G KV +P +L+ + FPH+MERG   SY
Sbjct: 803  MLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSY 862

Query: 657  RSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALN 478
             S S+LGQIYD V ++  E +   EI K+ CFDV IP+  + +W  RY+ Y+K+M  A+N
Sbjct: 863  HSTSILGQIYDYVDSYPDEDLCITEISKLPCFDVEIPDECMALWGERYEEYKKDMTMAMN 922

Query: 477  SGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEK 301
            SG E KN A NEVIKKYK+LLY AP+ E+S + ++ I++EA+A+YHVTYD A + + +EK
Sbjct: 923  SGCEVKNSACNEVIKKYKKLLYGAPEFEQSVRKTKDIFNEALALYHVTYDNARITYSIEK 982

Query: 300  CGFAWRVAGSALCSLCAWKLAGPKEKPIVILPSVLRDLL 184
            CGFAW+VAGSALC + A      KE    ILPS+L+D+L
Sbjct: 983  CGFAWKVAGSALCRIHAMY---HKENAFPILPSILQDIL 1018


>ref|XP_016449580.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Nicotiana
            tabacum]
          Length = 1060

 Score =  961 bits (2484), Expect = 0.0
 Identities = 528/1059 (49%), Positives = 699/1059 (66%), Gaps = 14/1059 (1%)
 Frame = -3

Query: 3315 VRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIRSFSGFV 3136
            ++LP SVE  + +IC  ++Q  I    R +L  IGE+ SL++L+ I       ++ SGF+
Sbjct: 17   IKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILSKISVCQIK-KTLSGFI 75

Query: 3135 ACLVKKEYP-----IVAATVLADYESPQASPQTQRIW--SPSSTSPYISPHTLNGENLQS 2977
              + KK Y          T ++  ES   SPQ QRI   SP+S+S  ++    NG   Q+
Sbjct: 76   VFMAKKYYQSETQQFYQQTPVSSAESFFQSPQIQRISLSSPNSSSSSVNFSPRNGPLFQA 135

Query: 2976 PLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQS--PLAGER 2803
             + +  +    S+   + PQ +S   S     PE+ ++          RR S  P+  E 
Sbjct: 136  TVHNNDIVGDGSDSPTSAPQMLSPPTS-----PERTNF----------RRDSHDPMPSEY 180

Query: 2802 RETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFE 2623
            R       IS+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    EI  M   PM  FE
Sbjct: 181  RNRAGIQGISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFE 240

Query: 2622 AKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLG 2443
            + IW  YG   C+   R Q+LDWDSG++H Y+CHV  DGSY FKGPYL + RTHLQ+SLG
Sbjct: 241  SYIWTKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLG 299

Query: 2442 DDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVK 2263
            D+NIL+V+F E+       IV+ GIL+GLRRY              N MDKEEK    VK
Sbjct: 300  DENILVVRFMEEAPRCPQEIVKNGILIGLRRYHFFVYKDDGKKK--NSMDKEEKI-DTVK 356

Query: 2262 CYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEV 2083
            CYFV ++S++PY  +  YILY K + +ARC FMH++ +S++ KY+ARFSLILS T+KL+V
Sbjct: 357  CYFVRMESLNPYE-NLTYILYDKIVHKARCRFMHVHMVSSMAKYMARFSLILSTTVKLQV 415

Query: 2082 DLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITD 1903
            DL +V I+ I+DI   D++G  ++DEDGKP++HTDGTGYISEDLA KCP+DF   KY  +
Sbjct: 416  DLNSVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKY-KN 474

Query: 1902 NSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQ 1723
               E++   V+    + +    E ++ EPPLLMQCRLF++G AVKGTLLVN+KL   TIQ
Sbjct: 475  AKLERYSNGVEPGENSSEVGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRCTIQ 534

Query: 1722 IRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLM 1543
            IRPSMIKV  D        FNSLEIV  S +P     S+ LIALL YGGVP E+F ++L 
Sbjct: 535  IRPSMIKVEADPKLSRTRMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPAEYFFDILN 594

Query: 1542 NALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKT 1363
            N L +T+ +YS+   AL+VA+NH   D   +A  MI +GVPL EPYL+ CLS+L   E+ 
Sbjct: 595  NTLEETQRLYSDEVTALKVAANHRDRDDASIATGMIMAGVPLCEPYLRCCLSSLAKEERN 654

Query: 1362 KLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIME 1183
             LK GK+P+S++FYLMGTADPT  LN +EVCVIL++GQISG+VLVYRNPG+HFGD+H + 
Sbjct: 655  GLKGGKLPISDTFYLMGTADPTDTLNPNEVCVILEHGQISGEVLVYRNPGLHFGDIHRLL 714

Query: 1182 AVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPW 1003
            AV VK + +VVGNAKYGIFFSTKG RSAA E+A GDFDGD YWVS+NP+LLKY+ A +PW
Sbjct: 715  AVPVKNLGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRPW 774

Query: 1002 TRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDH 823
             R +S P++  + P++FS             E R P++SMA A+ SWL  MDRLL+L  +
Sbjct: 775  CRIHSTPKALHREPKDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLMLRKN 834

Query: 822  CATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSYRS 652
              TE    K++K+K+ +L D+YYDA+DAPK+GNKV +P  L+VD FPH +E+     Y S
Sbjct: 835  NTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEK--KEEYIS 892

Query: 651  ISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSG 472
             SVLG+IYD V++FK+EA    EI K+  F+V IPE  + +W+ RY  YR EM +ALN+ 
Sbjct: 893  TSVLGEIYDRVKSFKAEAAVAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTS 952

Query: 471  DESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMGHG-VEKCG 295
             ESKND A+EV+KKYKQLLYEAPDMEES + +  I+++A+AIY VTYDYA   G V+KCG
Sbjct: 953  SESKNDLADEVVKKYKQLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKCG 1012

Query: 294  FAWRVAGSALCSLCAWKLAGP-KEKPIVILPSVLRDLLN 181
            FAW+VAGSALC L A   A    +K + + PS+L  LLN
Sbjct: 1013 FAWKVAGSALCRLHAELHAKEHNQKIMAVSPSILHKLLN 1051


>ref|XP_010322170.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Solanum
            lycopersicum]
 ref|XP_010322171.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Solanum
            lycopersicum]
          Length = 1014

 Score =  959 bits (2478), Expect = 0.0
 Identities = 532/1046 (50%), Positives = 700/1046 (66%), Gaps = 4/1046 (0%)
 Frame = -3

Query: 3309 LPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSGFVA 3133
            LP SVE  + RIC E+ Q       R  L+ IGE+ SLE+L  I  S  PI+ S S F+ 
Sbjct: 16   LPYSVETMLDRICKEQGQKPPCTGIRRRLSSIGEKGSLEMLKII--SRRPIKKSLSAFLV 73

Query: 3132 CLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPH--TLNGENLQSPLLSFP 2959
             ++ + YP        D  S  +SP    +   SS   + SP    L GE+     L   
Sbjct: 74   YMIDR-YP--------DCLSSSSSPFNCLLKRSSSPRLFPSPEGKRLQGESSSKSKLEMG 124

Query: 2958 VESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETTEPMT 2779
            + + +S      PQ ++ QLSF +E PE            + RR SP             
Sbjct: 125  LLACAS------PQKVARQLSFCEE-PES-----------NCRRTSPY------------ 154

Query: 2778 ISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWNSYG 2599
            +SQQLMILN+LE+RKLFLVLSYIG  KLE V++   AD+I R  +L M  FE++IWN++G
Sbjct: 155  VSQQLMILNELEFRKLFLVLSYIGCNKLEDVISPQIADDIVRKKNLSMTDFESEIWNAFG 214

Query: 2598 QKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVK 2419
            +      DRS++LDW+  KTH+YYCH+ ++G   FKGPYLN+ RTHLQR+LGDDN+LIVK
Sbjct: 215  KACYAVSDRSKYLDWNCRKTHIYYCHIKQNGYCSFKGPYLNTLRTHLQRALGDDNVLIVK 274

Query: 2418 FSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCYFVHIDS 2239
            F ED + A + I+EEGILVGLRRY                M K +   +++KCYFV  +S
Sbjct: 275  FVEDTSCA-NIILEEGILVGLRRYRFFVYKDDKERKKSPAMMKTKT--ASLKCYFVRFES 331

Query: 2238 VSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDLAAVIIE 2059
            +      E+Y+   KTIS+ARC FMH++ +S + KY AR SLILSKTIKL+ DL +V IE
Sbjct: 332  IGTCNDGESYVFSTKTISQARCKFMHVHMVSNMAKYAARLSLILSKTIKLQTDLDSVTIE 391

Query: 2058 IIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNSFEKHDQ 1879
             I+DI  +DE+G II DEDG+P +HTDGTG+ISEDLAM CPKDFS A+YI D ++E    
Sbjct: 392  RIEDILCRDENGCIIQDEDGEPRIHTDGTGFISEDLAMHCPKDFSKAEYIKDENYENFVD 451

Query: 1878 FVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIRPSMIKV 1699
             VD ++V  ++R + +RN++PPLLMQCRLF +G AVKGT LVN+K+    I IRPSM+KV
Sbjct: 452  IVDLDDVNVERRVSVSRNRKPPLLMQCRLFFNGCAVKGTFLVNRKIGSRKIHIRPSMVKV 511

Query: 1698 VKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNALVDTRN 1519
              D T     TF+SLEIV ISHRP +   SK LI+LL+YGGV +E+F+ LL +AL +T+ 
Sbjct: 512  EIDPTISSIPTFDSLEIVAISHRPNKAYLSKNLISLLSYGGVHKEYFMELLGSALEETKQ 571

Query: 1518 VYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIP 1339
            VY  +RAAL+VA N+  +D   +  RMISSG+PLNEP+L   LS L   E+TKL+ GK+P
Sbjct: 572  VYLRKRAALKVAINYREMDDECLTARMISSGIPLNEPHLHARLSRLAKIERTKLRGGKLP 631

Query: 1338 VSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEME 1159
            +S+SFYLMGTADPTGVL ++EVCVILDNGQ+SG+VLVYRNPG+HFGDVH+M+A YV+E+ 
Sbjct: 632  ISDSFYLMGTADPTGVLESNEVCVILDNGQVSGRVLVYRNPGLHFGDVHVMKARYVEELA 691

Query: 1158 EVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQ 979
            +VVG+AKYGIFFSTKG RSAA E+A GDFDGDMYWVS N +L+  +   +PW R +S P 
Sbjct: 692  DVVGDAKYGIFFSTKGPRSAATEIANGDFDGDMYWVSINRKLVDSYTTSRPWIRMHSTPN 751

Query: 978  SEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDHCATEKKSL 799
            +  K P EFS             EA+S   +M+ AADSWL +MDRLL L D    +  SL
Sbjct: 752  AVSKKPSEFSADELEYELFRQFLEAKSKGANMSLAADSWLAFMDRLLTLRDDNVDDMHSL 811

Query: 798  KDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMV 619
            K KM+ L+DIYYDALDAPK+G KV +P  L+ + FPH+ME+G   SY S S+LGQIYD V
Sbjct: 812  KGKMLHLIDIYYDALDAPKSGKKVSIPHYLKANKFPHYMEKGNSCSYHSTSILGQIYDHV 871

Query: 618  QAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDESKNDAANEV 439
             ++  E +   EI K+ CF+V IP+  + +W+ RY+ Y+K+M +A+N   E +  + NEV
Sbjct: 872  DSYPDEDLCITEISKLPCFEVEIPQRCMTLWRGRYEEYKKDMTRAMNFDCELRITSCNEV 931

Query: 438  IKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEKCGFAWRVAGSALC 262
            IKKYK LLY A + E++ + +E I+DEA+AIYHVTYD A + + +EKCGFAW+VAGSALC
Sbjct: 932  IKKYKMLLYGAVEFEQTVRKTEDIFDEALAIYHVTYDNARITYSIEKCGFAWKVAGSALC 991

Query: 261  SLCAWKLAGPKEKPIVILPSVLRDLL 184
             + A      KEK + ILPSVL+++L
Sbjct: 992  RIHAMY---RKEKDLPILPSVLQEIL 1014


>ref|XP_015077971.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            3 [Solanum pennellii]
          Length = 1018

 Score =  958 bits (2476), Expect = 0.0
 Identities = 529/1046 (50%), Positives = 701/1046 (67%), Gaps = 4/1046 (0%)
 Frame = -3

Query: 3309 LPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSGFVA 3133
            LP SVE  ++RIC E+ Q       R  L+ IGE+ SLE+L  I  S  PI+ S S F+ 
Sbjct: 20   LPYSVETMLERICKEQGQKPPCTGIRRRLSSIGEKGSLEMLKII--SRRPIKKSLSAFLV 77

Query: 3132 CLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPH--TLNGENLQSPLLSFP 2959
             ++ + YP        D  S  +SP    +   SS   + SP    + GE+     L   
Sbjct: 78   YMIDR-YP--------DCLSSSSSPFNSLLKRSSSPLLFPSPEGKRVQGESSSKSKLEMG 128

Query: 2958 VESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETTEPMT 2779
              + +S      PQ ++ QLSF +E PE  S           RR SP             
Sbjct: 129  FLACAS------PQKVARQLSFCEE-PESNS-----------RRTSPY------------ 158

Query: 2778 ISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWNSYG 2599
            +SQQLMILN+LE+RKLFLVLSYIG  KLE V++   AD+I R N+L M  FE++IWN++G
Sbjct: 159  VSQQLMILNELEFRKLFLVLSYIGCNKLEDVISPQIADDIVRKNNLSMTDFESEIWNAFG 218

Query: 2598 QKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVK 2419
            +      DRS++LDW+  KTH+YYCH+ ++G   FKGPYLN+ RTHLQR+LGDDN+LIVK
Sbjct: 219  KACYAVSDRSKYLDWNCRKTHIYYCHIKQNGYCTFKGPYLNTVRTHLQRALGDDNVLIVK 278

Query: 2418 FSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCYFVHIDS 2239
            F ED + A + I+EEGILVGLRRY                M K +   +++KCYFV  +S
Sbjct: 279  FVEDTSCA-NIILEEGILVGLRRYRFFVYKDDKERKKSPAMMKTKT--ASLKCYFVRFES 335

Query: 2238 VSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDLAAVIIE 2059
            +      E+Y+   KTIS+ARC FMH++ +S + KY AR SLILSKTIKL+ DL +V IE
Sbjct: 336  IGTCNDGESYVFSTKTISQARCKFMHVHMVSNMAKYAARLSLILSKTIKLQTDLDSVTIE 395

Query: 2058 IIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNSFEKHDQ 1879
             I+DI  +DE+G II DEDG+P +HTDGTG+ISEDLAM CPKDFS A+YI D ++E    
Sbjct: 396  RIEDILCRDENGCIIQDEDGEPRIHTDGTGFISEDLAMHCPKDFSKAEYIKDENYENFVD 455

Query: 1878 FVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIRPSMIKV 1699
             VD ++V  ++R + +RN+EPPLLMQCRLF +G AVKGT LVN+K+    I IRPSM+KV
Sbjct: 456  IVDLDDVNVERRASVSRNREPPLLMQCRLFFNGCAVKGTFLVNRKIGSRKIHIRPSMVKV 515

Query: 1698 VKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNALVDTRN 1519
              D T     TF+SLEIV ISHRP +   SK LI+LL+YGGV +E+F+ LL +AL +T+ 
Sbjct: 516  EIDPTISSIPTFDSLEIVAISHRPNKAYLSKNLISLLSYGGVHKEYFMELLGSALEETKQ 575

Query: 1518 VYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIP 1339
            V   +RAAL+VA N+  +D   +  RMISSG+PLNEP+L   LS L   E+TKL+ GK+P
Sbjct: 576  VRLRKRAALKVAINYREMDDECLTARMISSGIPLNEPHLHARLSRLAKIERTKLRGGKLP 635

Query: 1338 VSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEME 1159
            +++SFYLMGTADPTGVL ++EVCVILDNGQ+SG+VLVYRNPG+HFGDVH+M+A YV+E+ 
Sbjct: 636  INDSFYLMGTADPTGVLESNEVCVILDNGQVSGRVLVYRNPGLHFGDVHVMKARYVEELA 695

Query: 1158 EVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQ 979
            +VVG+AKYGIFFSTKG R AA E+A GDFDGDMYWVS N +++  +   +PW R +S P+
Sbjct: 696  DVVGDAKYGIFFSTKGPRXAATEIANGDFDGDMYWVSINRKVVDSYTTSRPWIRMHSTPK 755

Query: 978  SEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDHCATEKKSL 799
            +  K P EFS             EA+S   +M+ AADSWL +MDRLL+L D    +  SL
Sbjct: 756  AVSKKPSEFSADELEYELFRQFLEAKSKGANMSLAADSWLAFMDRLLMLRDDNVDDMHSL 815

Query: 798  KDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSYRSISVLGQIYDMV 619
            K KM+ L+DIYYDALDAPK+G KV +P  L+ + FPH+ME+G   SY S S+LGQIYD V
Sbjct: 816  KGKMLHLIDIYYDALDAPKSGKKVSIPHYLKANKFPHYMEKGNSCSYHSTSILGQIYDHV 875

Query: 618  QAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSGDESKNDAANEV 439
             ++  E +   EI K+ CF+V IP+  + +W+ RY+ Y+K+M +A+N   E +  + NEV
Sbjct: 876  DSYPDEDLCITEISKLPCFEVEIPQRCMTLWRGRYEEYKKDMTRAMNLDCELRITSCNEV 935

Query: 438  IKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYA-MGHGVEKCGFAWRVAGSALC 262
            IKKYK LLY A + E++ + +E I+DEA+AIYHVTYD A + + +EKCGFAW+VAGSALC
Sbjct: 936  IKKYKMLLYGAVEFEQTVRKTEDIFDEALAIYHVTYDNARIAYSIEKCGFAWKVAGSALC 995

Query: 261  SLCAWKLAGPKEKPIVILPSVLRDLL 184
             + A      KEK + ILPS+L+++L
Sbjct: 996  RIHAMY---RKEKDLPILPSLLQEIL 1018


>ref|XP_009760370.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Nicotiana sylvestris]
          Length = 1060

 Score =  956 bits (2470), Expect = 0.0
 Identities = 527/1059 (49%), Positives = 696/1059 (65%), Gaps = 14/1059 (1%)
 Frame = -3

Query: 3315 VRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIRSFSGFV 3136
            ++LP SVE  + +IC  ++Q  I    R +L  IGE+ SL++L+ I       ++ SGF+
Sbjct: 17   IKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILSKISVCQIK-KTLSGFI 75

Query: 3135 ACLVKKEYP-----IVAATVLADYESPQASPQTQRIW--SPSSTSPYISPHTLNGENLQS 2977
              + KK Y          T ++  ES   SPQ QRI   SP+S+S  ++    NG   Q+
Sbjct: 76   VFMAKKYYQSETQQFYQQTPVSSAESFFQSPQIQRISLSSPNSSSSSVNFSPRNGPLFQA 135

Query: 2976 PLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQS--PLAGER 2803
             + +  +    S+   + PQ +S   S     PE+ ++          RR S  P+  E 
Sbjct: 136  TVHNNDIVGDGSDSPTSAPQMLSPPTS-----PERTNF----------RRDSHDPMPSEY 180

Query: 2802 RETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFE 2623
            R       IS+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    EI  M   PM  FE
Sbjct: 181  RNRAGIQGISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFE 240

Query: 2622 AKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLG 2443
            + IW  YG   C+   R Q+LDWDSG++H Y+CHV  DGSY FKGPYL + RTHLQ+SLG
Sbjct: 241  SYIWTKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLG 299

Query: 2442 DDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVK 2263
            D+NIL+V+F E+       IV+ GIL+GLRRY              N MDKEEK    VK
Sbjct: 300  DENILVVRFMEEAPRCPQEIVKNGILIGLRRYHFFVYKDDGKKK--NSMDKEEKI-DTVK 356

Query: 2262 CYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEV 2083
            CYFV ++S++PY  +  YILY K + +ARC FMH++ +S++ KY+ARFSLILS T+KL+V
Sbjct: 357  CYFVRMESLNPYE-NLTYILYDKIVHKARCRFMHVHMVSSMAKYMARFSLILSTTVKLQV 415

Query: 2082 DLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITD 1903
            DL +V I+ I+DI   D++G  ++DEDGKP++HTDGTGYISEDLA KCP+DF   KY  +
Sbjct: 416  DLNSVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKY-KN 474

Query: 1902 NSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQ 1723
               E++   V+    + +    E ++ EPPLLMQCRLF++G AVKGTLLVN+KL   TIQ
Sbjct: 475  AKLERYSNGVEPGENSSEVGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRCTIQ 534

Query: 1722 IRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLM 1543
            IRPSMIKV  D        FNSLEIV  S +P     S+ LIALL YGGVP E+F ++L 
Sbjct: 535  IRPSMIKVEADPKLSRTRMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPAEYFFDILN 594

Query: 1542 NALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKT 1363
            N L +T+ +YS+   AL+VA+NH   D   +A  MI   VPL EPYL+ CLS+L   E+ 
Sbjct: 595  NTLEETQRLYSDEVTALKVAANHRDRDDASIATGMIMVVVPLCEPYLRCCLSSLAKEERN 654

Query: 1362 KLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIME 1183
             LK GK+P+S++FYLMGTADPT  LN  EVCVIL++GQISG+VLVYRNPG+HFGD+H + 
Sbjct: 655  GLKGGKLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRLL 714

Query: 1182 AVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPW 1003
            AV VK + +VVGNAKYGIFFSTKG RSAA E+A GDFDGD YWVS+NP+LLKY+ A +PW
Sbjct: 715  AVPVKNLGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRPW 774

Query: 1002 TRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDH 823
             R +S P++  + P++FS             E R P++SMA A+ SWL  MDRLL+L  +
Sbjct: 775  CRIHSTPKALHREPKDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLMLRKN 834

Query: 822  CATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSYRS 652
              TE    K++K+K+ +L D+YYDA+DAPK+GNKV +P  L+VD FPH +E+     Y S
Sbjct: 835  NTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEK--KEEYIS 892

Query: 651  ISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALNSG 472
             SVLG+IYD V++FK+EA    EI K+  F+V IPE  + +W+ RY  YR EM +ALN+ 
Sbjct: 893  TSVLGEIYDRVKSFKAEAAVAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTS 952

Query: 471  DESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMGHG-VEKCG 295
             ESKND A+EV+KKYKQLLYEAPDMEES + +  I+++A+AIY VTYDYA   G V+KCG
Sbjct: 953  SESKNDLADEVVKKYKQLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKCG 1012

Query: 294  FAWRVAGSALCSLCAWKLAGP-KEKPIVILPSVLRDLLN 181
            FAW+VAGSALC L A   A    +K + + PS+L  LLN
Sbjct: 1013 FAWKVAGSALCRLHAELHAKEHNQKIMAVSPSILHKLLN 1051


>ref|XP_019239863.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Nicotiana
            attenuata]
 gb|OIT20680.1| putative rna-dependent rna polymerase 5 [Nicotiana attenuata]
          Length = 1063

 Score =  952 bits (2462), Expect = 0.0
 Identities = 522/1061 (49%), Positives = 696/1061 (65%), Gaps = 14/1061 (1%)
 Frame = -3

Query: 3321 QEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIRSFSG 3142
            + ++LP SVE  + +IC  ++Q +     R +L  IGE+ SL++L+ I       ++ SG
Sbjct: 16   EAIKLPPSVEQMLNQICKNQRQNSPDETVRRLLLSIGEEGSLDILSKISVYQIK-KTLSG 74

Query: 3141 FVACLVKKEYPIVAATVLADYESPQAS-------PQTQRIW--SPSSTSPYISPHTLNGE 2989
            F+  + KK Y           ++P +S       PQ QRI   SP+S+S  ++    NG 
Sbjct: 75   FIVFIAKKYYQSETKQFYQQQQTPVSSAESFFQSPQIQRISLSSPNSSSSSVNFSPRNGP 134

Query: 2988 NLQSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAG 2809
              Q+ + +  +    S+   + PQ +S   S E    ++ SY              P+  
Sbjct: 135  LFQATVHNNDIVGDGSDSPTSAPQMLSPPTSPERANFQRDSY-------------DPMPS 181

Query: 2808 ERRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKV 2629
            E R       IS+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    EI  M   PM  
Sbjct: 182  EYRNRAGIQGISEQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAH 241

Query: 2628 FEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRS 2449
            FE+ IW  YG   C+   R Q+LDWDSG++H Y+CHV  DGSY FKGPYL + RTHLQ+S
Sbjct: 242  FESYIWTKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQS 300

Query: 2448 LGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSA 2269
            LGD+NIL+V+F E+       IV+ GILVGLRRY              N MDKEEK    
Sbjct: 301  LGDENILVVRFMEEAPRCPQEIVKNGILVGLRRYRFFVYKDDGKKK--NSMDKEEKI-DT 357

Query: 2268 VKCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKL 2089
            VKCYFV ++S++PY  +  YIL+ K + +ARC FMH++ +S++ KY+ARFSLILS T+KL
Sbjct: 358  VKCYFVRMESLNPYE-NLTYILHDKIVHKARCRFMHVHMVSSMAKYMARFSLILSTTVKL 416

Query: 2088 EVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYI 1909
            +VDL +V I+ I+DI   D++G  ++DEDGKP++HTDGTGYISEDLA KCP+DF   KY 
Sbjct: 417  QVDLNSVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKY- 475

Query: 1908 TDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGT 1729
             +   E++   V+    + +    E ++ E PLLMQCRLF++G AVKGTLLVN+KL   T
Sbjct: 476  KNAKLERYPNGVEPGENSSKVGEAEFQSGELPLLMQCRLFYNGLAVKGTLLVNRKLPRRT 535

Query: 1728 IQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNL 1549
            IQIRPSMIKV  D        FNSLEIV  S +P     S+ LIALL YGGVP E+F ++
Sbjct: 536  IQIRPSMIKVEADPKLSRARMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPAEYFFDI 595

Query: 1548 LMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGE 1369
            L   L +T+ +YS+   AL+VA+NH   D   +A  MI +GVPL EPYL+ CLS+L   E
Sbjct: 596  LNITLEETQRLYSDEVTALKVAANHRDRDDASIATGMIMAGVPLCEPYLRCCLSSLAKEE 655

Query: 1368 KTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHI 1189
            +  LK GK+P+S++FYLMGTADPT  LN  EVCVIL++GQISG+VLVYRNPG+HFGD+H 
Sbjct: 656  RNGLKGGKLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHR 715

Query: 1188 MEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHK 1009
            + AV VK + +VVGNAKYGIFFSTKG RSAA E+A GDFDGD YWVS+NP+LLKY++A +
Sbjct: 716  LLAVPVKNLGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYRASR 775

Query: 1008 PWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILG 829
            PW+R +S P++  + P++FS             E R P++SMA A+ SWL  MDRLLIL 
Sbjct: 776  PWSRIHSTPKTLHREPKDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLILR 835

Query: 828  DHCATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPIELRVDMFPHHMERGLDSSY 658
             +  TE    K++K+K+ +L D+YYDA+DAPK+GNKV +P  L+VD FPH +E+     Y
Sbjct: 836  KNNTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEK--KEEY 893

Query: 657  RSISVLGQIYDMVQAFKSEAVPQKEIWKMSCFDVPIPEIYVEMWKARYDNYRKEMAKALN 478
             S SVLG+IYD V++FK+EA    EI K+  F+V IPE  + +W+ RY  YR EM +ALN
Sbjct: 894  ISTSVLGEIYDRVKSFKAEAAAAVEIKKIPAFEVKIPETCLRLWEERYKKYRFEMIQALN 953

Query: 477  SGDESKNDAANEVIKKYKQLLYEAPDMEESPKDSEVIYDEAIAIYHVTYDYAMGHG-VEK 301
            + +ESKND A+EV+KKYKQLLYEAPDMEES + +  I+++A+AIY VTYDYA   G V+K
Sbjct: 954  TSNESKNDLADEVVKKYKQLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKK 1013

Query: 300  CGFAWRVAGSALCSLCAWKLAGP-KEKPIVILPSVLRDLLN 181
            CGFAW+VAGSALC L A   A    +K + + PS+L  LLN
Sbjct: 1014 CGFAWKVAGSALCRLHAELHAKEHNQKVMAVSPSILHKLLN 1054