BLASTX nr result
ID: Rehmannia29_contig00016726
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00016726
(404 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIN26766.1| RNA polymerase II transcription initiation/nucleo... 87 5e-28
ref|XP_011090547.1| RNA polymerase II transcription factor B sub... 86 2e-27
ref|XP_012844594.1| PREDICTED: general transcription factor IIH ... 85 3e-27
ref|XP_022856816.1| RNA polymerase II transcription factor B sub... 78 8e-26
gb|KZV53813.1| phytoene synthase, chloroplastic-like [Dorcoceras... 81 8e-25
ref|XP_006347058.1| PREDICTED: general transcription factor IIH ... 77 2e-24
gb|PHT90513.1| hypothetical protein T459_05626 [Capsicum annuum] 77 4e-24
ref|XP_016559882.1| PREDICTED: RNA polymerase II transcription f... 77 4e-24
gb|PHT55937.1| hypothetical protein CQW23_04423 [Capsicum baccatum] 77 4e-24
gb|PHU26465.1| hypothetical protein BC332_04797 [Capsicum chinense] 77 4e-24
ref|XP_016452081.1| PREDICTED: RNA polymerase II transcription f... 75 5e-24
ref|XP_016452082.1| PREDICTED: RNA polymerase II transcription f... 75 5e-24
ref|XP_009762927.1| PREDICTED: general transcription factor IIH ... 75 7e-24
ref|XP_009631135.1| PREDICTED: RNA polymerase II transcription f... 75 7e-24
ref|XP_016457361.1| PREDICTED: RNA polymerase II transcription f... 75 7e-24
ref|XP_009631136.1| PREDICTED: RNA polymerase II transcription f... 75 7e-24
ref|XP_009631137.1| PREDICTED: RNA polymerase II transcription f... 75 7e-24
ref|XP_016480352.1| PREDICTED: RNA polymerase II transcription f... 75 2e-23
ref|XP_009596858.1| PREDICTED: RNA polymerase II transcription f... 75 2e-23
ref|XP_018625216.1| PREDICTED: RNA polymerase II transcription f... 75 2e-23
>gb|PIN26766.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH, subunit TFB2 [Handroanthus
impetiginosus]
Length = 453
Score = 87.0 bits (214), Expect(2) = 5e-28
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRVLTETVERKKE TYL N TFQRNLQKHIVHG
Sbjct: 71 GVSKHKVAIDRLIQLRVLTETVERKKETTYLFNPTFQRNLQKHIVHG 117
Score = 65.1 bits (157), Expect(2) = 5e-28
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWEVW 349
+ G+LPREPMPSNITVRLPSLE+LDAYA QQWE++
Sbjct: 115 VHGGILPREPMPSNITVRLPSLEELDAYAAQQWELF 150
>ref|XP_011090547.1| RNA polymerase II transcription factor B subunit 2 [Sesamum
indicum]
Length = 453
Score = 85.9 bits (211), Expect(2) = 2e-27
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKH+VAVDRLIQLR+LTETVERKKEATYL N TFQRNLQKHI+HG
Sbjct: 71 GISKHRVAVDRLIQLRILTETVERKKEATYLFNPTFQRNLQKHILHG 117
Score = 64.3 bits (155), Expect(2) = 2e-27
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +2
Query: 251 GVLPREPMPSNITVRLPSLEDLDAYAVQQWEVW 349
GVLPREPMPSNI RLPSLEDLDAYAVQQWE++
Sbjct: 118 GVLPREPMPSNIIARLPSLEDLDAYAVQQWELF 150
>ref|XP_012844594.1| PREDICTED: general transcription factor IIH subunit 4 [Erythranthe
guttata]
gb|EYU31406.1| hypothetical protein MIMGU_mgv1a006192mg [Erythranthe guttata]
Length = 453
Score = 85.1 bits (209), Expect(2) = 3e-27
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVAVDRLIQLR+LTET+ERKKE TYL+N TFQ NLQKHIVHG
Sbjct: 71 GVSKHKVAVDRLIQLRILTETIERKKETTYLLNPTFQSNLQKHIVHG 117
Score = 64.7 bits (156), Expect(2) = 3e-27
Identities = 32/43 (74%), Positives = 35/43 (81%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWEVWTFVYFLM 370
+ GVLPREPM SNITVRLP+LEDLDAYAVQQWE YFL+
Sbjct: 115 VHGGVLPREPMASNITVRLPTLEDLDAYAVQQWE-----YFLL 152
>ref|XP_022856816.1| RNA polymerase II transcription factor B subunit 2 [Olea europaea
var. sylvestris]
Length = 453
Score = 78.2 bits (191), Expect(2) = 8e-26
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRVL+ET++RKKEATY +N TFQ NLQKHI HG
Sbjct: 71 GVSKHKVAIDRLIQLRVLSETLDRKKEATYRLNPTFQLNLQKHISHG 117
Score = 66.6 bits (161), Expect(2) = 8e-26
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +2
Query: 251 GVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
G+LPREPMPSN+TVRLPSLEDLDAYAVQQWE
Sbjct: 118 GILPREPMPSNVTVRLPSLEDLDAYAVQQWE 148
>gb|KZV53813.1| phytoene synthase, chloroplastic-like [Dorcoceras hygrometricum]
Length = 769
Score = 80.9 bits (198), Expect(2) = 8e-25
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRVLTET++RKKEATY N TFQ NLQKHIVHG
Sbjct: 516 GLSKHKVAIDRLIQLRVLTETLDRKKEATYRFNPTFQLNLQKHIVHG 562
Score = 60.5 bits (145), Expect(2) = 8e-25
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ G+LPREPMPSNI VRLPS E+LDAYA+QQWE
Sbjct: 560 VHGGILPREPMPSNIAVRLPSSEELDAYALQQWE 593
>ref|XP_006347058.1| PREDICTED: general transcription factor IIH subunit 4 [Solanum
tuberosum]
Length = 453
Score = 77.0 bits (188), Expect(2) = 2e-24
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEATY +N FQ NLQKHIVHG
Sbjct: 71 GFSKHKVAIDRLIQLRVMTETFDRKKEATYQLNPKFQFNLQKHIVHG 117
Score = 63.2 bits (152), Expect(2) = 2e-24
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ G+LPREPMPSNITVRLPSLE+L+AYAV+QWE
Sbjct: 115 VHGGILPREPMPSNITVRLPSLEELEAYAVEQWE 148
>gb|PHT90513.1| hypothetical protein T459_05626 [Capsicum annuum]
Length = 455
Score = 77.0 bits (188), Expect(2) = 4e-24
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEATY +N FQ NLQKHIVHG
Sbjct: 71 GFSKHKVAIDRLIQLRVMTETYDRKKEATYQLNPKFQFNLQKHIVHG 117
Score = 62.0 bits (149), Expect(2) = 4e-24
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ GVLPREPMPSNITVRLPSLE+L+AYA +QWE
Sbjct: 115 VHGGVLPREPMPSNITVRLPSLEELEAYAAEQWE 148
>ref|XP_016559882.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
[Capsicum annuum]
Length = 453
Score = 77.0 bits (188), Expect(2) = 4e-24
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEATY +N FQ NLQKHIVHG
Sbjct: 71 GFSKHKVAIDRLIQLRVMTETYDRKKEATYQLNPKFQFNLQKHIVHG 117
Score = 62.0 bits (149), Expect(2) = 4e-24
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ GVLPREPMPSNITVRLPSLE+L+AYA +QWE
Sbjct: 115 VHGGVLPREPMPSNITVRLPSLEELEAYAAEQWE 148
>gb|PHT55937.1| hypothetical protein CQW23_04423 [Capsicum baccatum]
Length = 324
Score = 77.0 bits (188), Expect(2) = 4e-24
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEATY +N FQ NLQKHIVHG
Sbjct: 71 GFSKHKVAIDRLIQLRVMTETYDRKKEATYQLNPKFQFNLQKHIVHG 117
Score = 62.0 bits (149), Expect(2) = 4e-24
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ GVLPREPMPSNITVRLPSLE+L+AYA +QWE
Sbjct: 115 VHGGVLPREPMPSNITVRLPSLEELEAYAAEQWE 148
>gb|PHU26465.1| hypothetical protein BC332_04797 [Capsicum chinense]
Length = 175
Score = 77.0 bits (188), Expect(2) = 4e-24
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEATY +N FQ NLQKHIVHG
Sbjct: 71 GFSKHKVAIDRLIQLRVMTETYDRKKEATYQLNPKFQFNLQKHIVHG 117
Score = 62.0 bits (149), Expect(2) = 4e-24
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ GVLPREPMPSNITVRLPSLE+L+AYA +QWE
Sbjct: 115 VHGGVLPREPMPSNITVRLPSLEELEAYAAEQWE 148
>ref|XP_016452081.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like
isoform X1 [Nicotiana tabacum]
Length = 453
Score = 75.1 bits (183), Expect(2) = 5e-24
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEA Y +N FQ NLQKHIVHG
Sbjct: 71 GFSKHKVAIDRLIQLRVMTETFDRKKEAMYQLNPKFQLNLQKHIVHG 117
Score = 63.5 bits (153), Expect(2) = 5e-24
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ GVLPREPMPSNITVRLPSLE+L+AYAV+QWE
Sbjct: 115 VHGGVLPREPMPSNITVRLPSLEELEAYAVEQWE 148
>ref|XP_016452082.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like
isoform X2 [Nicotiana tabacum]
Length = 391
Score = 75.1 bits (183), Expect(2) = 5e-24
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEA Y +N FQ NLQKHIVHG
Sbjct: 9 GFSKHKVAIDRLIQLRVMTETFDRKKEAMYQLNPKFQLNLQKHIVHG 55
Score = 63.5 bits (153), Expect(2) = 5e-24
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ GVLPREPMPSNITVRLPSLE+L+AYAV+QWE
Sbjct: 53 VHGGVLPREPMPSNITVRLPSLEELEAYAVEQWE 86
>ref|XP_009762927.1| PREDICTED: general transcription factor IIH subunit 4 [Nicotiana
sylvestris]
ref|XP_016457359.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like
isoform X1 [Nicotiana tabacum]
Length = 453
Score = 74.7 bits (182), Expect(2) = 7e-24
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEA Y +N FQ NLQKHIVHG
Sbjct: 71 GFSKHKVAIDRLIQLRVMTETFDRKKEAMYQLNPKFQFNLQKHIVHG 117
Score = 63.5 bits (153), Expect(2) = 7e-24
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ GVLPREPMPSNITVRLPSLE+L+AYAV+QWE
Sbjct: 115 VHGGVLPREPMPSNITVRLPSLEELEAYAVEQWE 148
>ref|XP_009631135.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like
isoform X1 [Nicotiana tomentosiformis]
Length = 453
Score = 74.7 bits (182), Expect(2) = 7e-24
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEA Y +N FQ NLQKHIVHG
Sbjct: 71 GFSKHKVAIDRLIQLRVMTETFDRKKEAMYRLNPKFQFNLQKHIVHG 117
Score = 63.5 bits (153), Expect(2) = 7e-24
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ GVLPREPMPSNITVRLPSLE+L+AYAV+QWE
Sbjct: 115 VHGGVLPREPMPSNITVRLPSLEELEAYAVEQWE 148
>ref|XP_016457361.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like
isoform X2 [Nicotiana tabacum]
Length = 391
Score = 74.7 bits (182), Expect(2) = 7e-24
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEA Y +N FQ NLQKHIVHG
Sbjct: 9 GFSKHKVAIDRLIQLRVMTETFDRKKEAMYQLNPKFQFNLQKHIVHG 55
Score = 63.5 bits (153), Expect(2) = 7e-24
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ GVLPREPMPSNITVRLPSLE+L+AYAV+QWE
Sbjct: 53 VHGGVLPREPMPSNITVRLPSLEELEAYAVEQWE 86
>ref|XP_009631136.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like
isoform X2 [Nicotiana tomentosiformis]
Length = 391
Score = 74.7 bits (182), Expect(2) = 7e-24
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEA Y +N FQ NLQKHIVHG
Sbjct: 9 GFSKHKVAIDRLIQLRVMTETFDRKKEAMYRLNPKFQFNLQKHIVHG 55
Score = 63.5 bits (153), Expect(2) = 7e-24
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ GVLPREPMPSNITVRLPSLE+L+AYAV+QWE
Sbjct: 53 VHGGVLPREPMPSNITVRLPSLEELEAYAVEQWE 86
>ref|XP_009631137.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like
isoform X3 [Nicotiana tomentosiformis]
Length = 386
Score = 74.7 bits (182), Expect(2) = 7e-24
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEA Y +N FQ NLQKHIVHG
Sbjct: 71 GFSKHKVAIDRLIQLRVMTETFDRKKEAMYRLNPKFQFNLQKHIVHG 117
Score = 63.5 bits (153), Expect(2) = 7e-24
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ GVLPREPMPSNITVRLPSLE+L+AYAV+QWE
Sbjct: 115 VHGGVLPREPMPSNITVRLPSLEELEAYAVEQWE 148
>ref|XP_016480352.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like
isoform X1 [Nicotiana tabacum]
Length = 452
Score = 74.7 bits (182), Expect(2) = 2e-23
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEA Y +N FQ NLQKHIVHG
Sbjct: 71 GFSKHKVAIDRLIQLRVMTETFDRKKEAMYRLNPKFQFNLQKHIVHG 117
Score = 62.0 bits (149), Expect(2) = 2e-23
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ GVLPREPMPSNITVRLPSLE+L+A+AV+QWE
Sbjct: 115 VHGGVLPREPMPSNITVRLPSLEELEAFAVEQWE 148
>ref|XP_009596858.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like
isoform X1 [Nicotiana tomentosiformis]
Length = 452
Score = 74.7 bits (182), Expect(2) = 2e-23
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEA Y +N FQ NLQKHIVHG
Sbjct: 71 GFSKHKVAIDRLIQLRVMTETFDRKKEAMYRLNPKFQFNLQKHIVHG 117
Score = 62.0 bits (149), Expect(2) = 2e-23
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ GVLPREPMPSNITVRLPSLE+L+A+AV+QWE
Sbjct: 115 VHGGVLPREPMPSNITVRLPSLEELEAFAVEQWE 148
>ref|XP_018625216.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like
isoform X2 [Nicotiana tomentosiformis]
Length = 445
Score = 74.7 bits (182), Expect(2) = 2e-23
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +1
Query: 1 GASKHKVAVDRLIQLRVLTETVERKKEATYLVNRTFQRNLQKHIVHG 141
G SKHKVA+DRLIQLRV+TET +RKKEA Y +N FQ NLQKHIVHG
Sbjct: 71 GFSKHKVAIDRLIQLRVMTETFDRKKEAMYRLNPKFQFNLQKHIVHG 117
Score = 62.0 bits (149), Expect(2) = 2e-23
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +2
Query: 242 IGSGVLPREPMPSNITVRLPSLEDLDAYAVQQWE 343
+ GVLPREPMPSNITVRLPSLE+L+A+AV+QWE
Sbjct: 115 VHGGVLPREPMPSNITVRLPSLEELEAFAVEQWE 148