BLASTX nr result

ID: Rehmannia29_contig00016584 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00016584
         (590 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020703790.1| uncharacterized protein LOC110115030 [Dendro...    58   3e-06

>ref|XP_020703790.1| uncharacterized protein LOC110115030 [Dendrobium catenatum]
          Length = 793

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
 Frame = -1

Query: 584 IVFESTPKFCKNCKVFGHFSDVCPGPQVKHP--IFPPKNYIPKEKAFKPTPKNDK----- 426
           I +E  P  C  CK F H S++CP     +P  + PPK+   +  + +P P ++      
Sbjct: 155 IQYEWRPSICDFCKSFNHSSELCPSNPNPNPSAVLPPKSPRGRSTSHRPRPPSNNPAGIL 214

Query: 425 --PSTAAVFEPKNYVSSTSNTEKPSGTAALDSLTDMEHFPPLELDKKLPSKPNTEAVSQN 252
             P+      P   +S + N   P     +       HFP + L   LPS P+ +    +
Sbjct: 215 PIPTPRTSSSPGKSLSVSQNVISPPEQPVIPPPDSTNHFPTVTL-SSLPSLPDIQTAETS 273

Query: 251 QILKMTEKCTAD-TPYTNSSVKNQKSTGFDANSIS--PIVNP---PPKDIN----ASSNA 102
                 E   +  TP T +++ N  S    ++S S  P+  P   PPK  N    A S  
Sbjct: 274 LPNHTPENLVSILTPQTTATIPNLNSPNIPSSSTSDPPLKQPTSSPPKCSNQLPTAQSPL 333

Query: 101 HTTNATEVHLLSNTTSNETSVA 36
            +++  + +LL+  + +E +++
Sbjct: 334 KSSSPNKFNLLNLLSDSEATLS 355


Top