BLASTX nr result

ID: Rehmannia29_contig00016324 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00016324
         (525 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011073429.1| putative F-box/LRR-repeat protein At5g41840 ...    82   6e-15

>ref|XP_011073429.1| putative F-box/LRR-repeat protein At5g41840 [Sesamum indicum]
 ref|XP_011073430.1| putative F-box/LRR-repeat protein At5g41840 [Sesamum indicum]
 ref|XP_020548459.1| putative F-box/LRR-repeat protein At5g41840 [Sesamum indicum]
 ref|XP_020548460.1| putative F-box/LRR-repeat protein At5g41840 [Sesamum indicum]
          Length = 407

 Score = 81.6 bits (200), Expect = 6e-15
 Identities = 51/100 (51%), Positives = 61/100 (61%), Gaps = 9/100 (9%)
 Frame = -2

Query: 482 NGHGFLQGSLETFKPFIIKTLEKKNF---------AKRLKSLQLARLDLDENFSQYPFES 330
           NG   L+G LE   P     LE  N+         AK LK L++ARLDLDEN SQYP+ES
Sbjct: 239 NGVNCLEGELELDAP----NLEYFNYGGFLATRFLAKTLKCLRIARLDLDENVSQYPYES 294

Query: 329 DIQAAELIKVCSDTEKLWLSEKLFSVSFYIRILHSFVNPL 210
           D QAA+LIKVCSD EKLWLSE +      + +LH   +PL
Sbjct: 295 DEQAAKLIKVCSDAEKLWLSENV------VIMLHHCPHPL 328


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