BLASTX nr result
ID: Rehmannia29_contig00016179
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00016179
(560 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011094245.1| 33 kDa ribonucleoprotein, chloroplastic [Ses... 120 2e-29
ref|XP_012828754.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 110 1e-25
ref|XP_022842449.1| 33 kDa ribonucleoprotein, chloroplastic [Ole... 87 7e-17
gb|KZV54857.1| 33 kDa ribonucleoprotein, chloroplastic-like [Dor... 79 4e-14
gb|PIM98133.1| Splicing factor 3b, subunit 4 [Handroanthus impet... 70 1e-10
gb|EPS68161.1| hypothetical protein M569_06611, partial [Genlise... 67 4e-10
ref|XP_019225492.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 67 9e-10
ref|XP_018832440.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 64 1e-09
ref|XP_016442182.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 66 2e-09
emb|CAA43429.1| ribonucleoprotein, partial [Nicotiana tabacum] 66 2e-09
ref|XP_009763024.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 66 2e-09
gb|PNY02931.1| ribonucleoprotein chloroplastic-like [Trifolium p... 65 3e-09
dbj|GAU17518.1| hypothetical protein TSUD_340620 [Trifolium subt... 65 4e-09
ref|XP_004228672.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 65 6e-09
ref|XP_015062494.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 65 6e-09
ref|XP_018851178.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 64 8e-09
ref|XP_021623673.1| 33 kDa ribonucleoprotein, chloroplastic-like... 64 1e-08
ref|XP_013450228.1| 33 kDa ribonucleoprotein [Medicago truncatul... 64 1e-08
ref|XP_019177767.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 64 2e-08
ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 63 2e-08
>ref|XP_011094245.1| 33 kDa ribonucleoprotein, chloroplastic [Sesamum indicum]
Length = 320
Score = 120 bits (300), Expect = 2e-29
Identities = 69/136 (50%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Frame = +1
Query: 154 IGTCSHNFSSNSI-DHLSLYLFPCKTNPIKTSSKLKTFLNYXXXXXXXXXXXYCASTAFX 330
IGT SH SS +I DHLSL+ FPCK NP+K+ SK++T L+Y YC S+AF
Sbjct: 13 IGTSSHYLSSTTINDHLSLHFFPCKANPVKSLSKIRTCLSYSPFSFHSRSSIYCVSSAFD 72
Query: 331 XXXXXXXXXXXXXXXXSGVQETVSDIXXXXXDGDVAQPAAGGRLYVGNLPFTMTSAQLSE 510
S +QETV++ + V+ A GRLYVGNLPF+MTS+QLSE
Sbjct: 73 SVELNQEEVEEELE--SSIQETVTEAEEE--ENGVSPSAEAGRLYVGNLPFSMTSSQLSE 128
Query: 511 IFAEAGRVVSVEIVYD 558
IFAEAGRV SVEIVYD
Sbjct: 129 IFAEAGRVASVEIVYD 144
>ref|XP_012828754.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Erythranthe
guttata]
gb|EYU18105.1| hypothetical protein MIMGU_mgv1a009876mg [Erythranthe guttata]
Length = 328
Score = 110 bits (274), Expect = 1e-25
Identities = 74/140 (52%), Positives = 84/140 (60%), Gaps = 7/140 (5%)
Frame = +1
Query: 160 TCSHNFSSNSIDHLSLYLFP-CKTNPIKTS-SKLKTFLNYXXXXXXXXXXX-YCASTAFX 330
T SH+ SS S+DHLSL+LFP K NPIKT SKLK+F N YCASTAF
Sbjct: 15 TSSHSLSSTSVDHLSLHLFPFSKANPIKTHPSKLKSFFNCSSFSSLCRSSSVYCASTAFD 74
Query: 331 XXXXXXXXXXXXXXXXS----GVQETVSDIXXXXXDGDVAQPAAGGRLYVGNLPFTMTSA 498
+ET+S+I DV+QP+ GRLY GNLPF+MTSA
Sbjct: 75 SVELNQEDVDDDDDEDEEEDIDEEETLSEIQDEG--ADVSQPS--GRLYAGNLPFSMTSA 130
Query: 499 QLSEIFAEAGRVVSVEIVYD 558
QLSEIFAEAGRVVSVEIVYD
Sbjct: 131 QLSEIFAEAGRVVSVEIVYD 150
>ref|XP_022842449.1| 33 kDa ribonucleoprotein, chloroplastic [Olea europaea var.
sylvestris]
Length = 317
Score = 86.7 bits (213), Expect = 7e-17
Identities = 59/129 (45%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
Frame = +1
Query: 181 SNSIDHLSL---YLFPCKTNPIKTSSKLKTFLNYXXXXXXXXXXXYCASTAFXXXXXXXX 351
SNSI H SL + FP K+ PIK S LK+ N +CAS AF
Sbjct: 21 SNSIHHFSLTATHFFPFKSKPIK-SPNLKSHYNLNSPPFSHSVL-FCASAAFDSVEITQE 78
Query: 352 XXXXXXXXXSGVQETVSDIXXXXXDGDVAQPAAGGRLYVGNLPFTMTSAQLSEIFAEAGR 531
V++ D +G +Q A GRLYVGNLPF+MTS+QLSEIFAEAGR
Sbjct: 79 ETQEIVPEQEVVEKGEDD------EGVESQSAEAGRLYVGNLPFSMTSSQLSEIFAEAGR 132
Query: 532 VVSVEIVYD 558
+VSVEIVYD
Sbjct: 133 IVSVEIVYD 141
>gb|KZV54857.1| 33 kDa ribonucleoprotein, chloroplastic-like [Dorcoceras
hygrometricum]
Length = 314
Score = 79.0 bits (193), Expect = 4e-14
Identities = 59/135 (43%), Positives = 64/135 (47%)
Frame = +1
Query: 154 IGTCSHNFSSNSIDHLSLYLFPCKTNPIKTSSKLKTFLNYXXXXXXXXXXXYCASTAFXX 333
IG H+ S S DH+SL+ P K PI K F Y AST
Sbjct: 16 IGASCHSPPSTSPDHISLHCLPYKPKPIIAKYTGK-FSIYPNCYPFSSLSRSVASTE--- 71
Query: 334 XXXXXXXXXXXXXXXSGVQETVSDIXXXXXDGDVAQPAAGGRLYVGNLPFTMTSAQLSEI 513
QETVSD + Q A GRLYVGNLPF+MTS QLSEI
Sbjct: 72 ----SHGVEFSQEEEGNSQETVSD----EEENVKRQSAEAGRLYVGNLPFSMTSKQLSEI 123
Query: 514 FAEAGRVVSVEIVYD 558
F EAGRVVSVEIVYD
Sbjct: 124 FEEAGRVVSVEIVYD 138
>gb|PIM98133.1| Splicing factor 3b, subunit 4 [Handroanthus impetiginosus]
Length = 452
Score = 70.1 bits (170), Expect = 1e-10
Identities = 36/60 (60%), Positives = 46/60 (76%)
Frame = +1
Query: 379 SGVQETVSDIXXXXXDGDVAQPAAGGRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
SG+Q TVS+ + +V + GRLYVGNLPF+MTSA+LSEIFAEAGRV SVE++Y+
Sbjct: 219 SGIQGTVSEAEGV--ENEVPESGEAGRLYVGNLPFSMTSAELSEIFAEAGRVDSVEMIYN 276
>gb|EPS68161.1| hypothetical protein M569_06611, partial [Genlisea aurea]
Length = 204
Score = 66.6 bits (161), Expect = 4e-10
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +1
Query: 442 PAAGGRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
P+ GRLYVGNLPF++TSAQLSEIF+EAG VVSVEIVYD
Sbjct: 8 PSEAGRLYVGNLPFSITSAQLSEIFSEAGGVVSVEIVYD 46
>ref|XP_019225492.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Nicotiana
attenuata]
gb|OIT32626.1| 33 kda ribonucleoprotein, chloroplastic [Nicotiana attenuata]
Length = 324
Score = 67.0 bits (162), Expect = 9e-10
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +1
Query: 424 DGDVAQPAAGGRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
+G ++ GGRLYVGNLPF+MTS+QLSEIFAEAG V +VEIVYD
Sbjct: 104 EGVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYD 148
>ref|XP_018832440.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like, partial
[Juglans regia]
Length = 158
Score = 64.3 bits (155), Expect = 1e-09
Identities = 29/35 (82%), Positives = 34/35 (97%)
Frame = +1
Query: 454 GRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
GRLYVGNLP++MTSAQL+E+F EAGRVVSVE+VYD
Sbjct: 70 GRLYVGNLPYSMTSAQLTEVFEEAGRVVSVEVVYD 104
>ref|XP_016442182.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Nicotiana
tabacum]
ref|XP_018623046.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Nicotiana
tomentosiformis]
sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
pir||S12111 ribonucleoprotein, 33K, precursor - common tobacco
emb|CAA37879.1| unnamed protein product [Nicotiana tabacum]
Length = 324
Score = 66.2 bits (160), Expect = 2e-09
Identities = 47/124 (37%), Positives = 59/124 (47%)
Frame = +1
Query: 187 SIDHLSLYLFPCKTNPIKTSSKLKTFLNYXXXXXXXXXXXYCASTAFXXXXXXXXXXXXX 366
S+DHLSL + N S+KLK CAS +
Sbjct: 30 SVDHLSLSTYNTHFNFKINSTKLKAHFPISSLYRSSIFLSTCASVS--DGVEVVQEDDEE 87
Query: 367 XXXXSGVQETVSDIXXXXXDGDVAQPAAGGRLYVGNLPFTMTSAQLSEIFAEAGRVVSVE 546
S +E + + + + GGRLYVGNLPF+MTS+QLSEIFAEAG V +VE
Sbjct: 88 EVALSAEEEEEIEEKEERVESESVE---GGRLYVGNLPFSMTSSQLSEIFAEAGTVANVE 144
Query: 547 IVYD 558
IVYD
Sbjct: 145 IVYD 148
>emb|CAA43429.1| ribonucleoprotein, partial [Nicotiana tabacum]
Length = 292
Score = 65.9 bits (159), Expect = 2e-09
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = +1
Query: 436 AQPAAGGRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
++ GGRLYVGNLPF+MTS+QLSEIFAEAG V +VEIVYD
Sbjct: 97 SESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYD 137
>ref|XP_009763024.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Nicotiana
sylvestris]
ref|XP_016443475.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Nicotiana
tabacum]
emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
Length = 319
Score = 65.9 bits (159), Expect = 2e-09
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = +1
Query: 436 AQPAAGGRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
++ GGRLYVGNLPF+MTS+QLSEIFAEAG V +VEIVYD
Sbjct: 103 SESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYD 143
>gb|PNY02931.1| ribonucleoprotein chloroplastic-like [Trifolium pratense]
Length = 304
Score = 65.5 bits (158), Expect = 3e-09
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = +1
Query: 388 QETVSDIXXXXXDGDVAQPAAGGRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
QET + V+ GRLYVGNLPFT+TS+QL+EIFAEAG VVSVEIVYD
Sbjct: 90 QETSDKPQQEEEEQKVSTSDDAGRLYVGNLPFTITSSQLNEIFAEAGTVVSVEIVYD 146
>dbj|GAU17518.1| hypothetical protein TSUD_340620 [Trifolium subterraneum]
Length = 308
Score = 65.1 bits (157), Expect = 4e-09
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1
Query: 433 VAQPAAGGRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
VA GRLYVGNLPFT TS+QL+EIFAEAG VVSVE+VYD
Sbjct: 91 VATSVDAGRLYVGNLPFTTTSSQLAEIFAEAGTVVSVEVVYD 132
>ref|XP_004228672.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Solanum
lycopersicum]
Length = 328
Score = 64.7 bits (156), Expect = 6e-09
Identities = 33/47 (70%), Positives = 39/47 (82%), Gaps = 2/47 (4%)
Frame = +1
Query: 424 DGDVAQPAA--GGRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
DG V +P + GRLYVGNLPF+MT +QLSEIFAEAG+V +VEIVYD
Sbjct: 114 DGVVDEPKSIEDGRLYVGNLPFSMTPSQLSEIFAEAGKVANVEIVYD 160
>ref|XP_015062494.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
pennellii]
Length = 331
Score = 64.7 bits (156), Expect = 6e-09
Identities = 33/47 (70%), Positives = 39/47 (82%), Gaps = 2/47 (4%)
Frame = +1
Query: 424 DGDVAQPAA--GGRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
DG V +P + GRLYVGNLPF+MT +QLSEIFAEAG+V +VEIVYD
Sbjct: 112 DGVVDEPKSIEDGRLYVGNLPFSMTPSQLSEIFAEAGKVANVEIVYD 158
>ref|XP_018851178.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Juglans regia]
ref|XP_018851179.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Juglans regia]
ref|XP_018851180.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Juglans regia]
ref|XP_018851181.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Juglans regia]
Length = 326
Score = 64.3 bits (155), Expect = 8e-09
Identities = 29/35 (82%), Positives = 34/35 (97%)
Frame = +1
Query: 454 GRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
GRLYVGNLP++MTSAQL+E+F EAGRVVSVE+VYD
Sbjct: 116 GRLYVGNLPYSMTSAQLTEVFEEAGRVVSVEVVYD 150
>ref|XP_021623673.1| 33 kDa ribonucleoprotein, chloroplastic-like [Manihot esculenta]
gb|OAY40727.1| hypothetical protein MANES_09G044400 [Manihot esculenta]
Length = 316
Score = 63.5 bits (153), Expect = 1e-08
Identities = 27/36 (75%), Positives = 34/36 (94%)
Frame = +1
Query: 451 GGRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
GGRLYVGNLP+ MTS+QL+E+F EAGRV++VEI+YD
Sbjct: 107 GGRLYVGNLPYAMTSSQLTEVFQEAGRVINVEIIYD 142
>ref|XP_013450228.1| 33 kDa ribonucleoprotein [Medicago truncatula]
gb|KEH24256.1| 33 kDa ribonucleoprotein [Medicago truncatula]
Length = 318
Score = 63.5 bits (153), Expect = 1e-08
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = +1
Query: 454 GRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
GRLYVGNLPF+MTS+QL++IFAEAG VVSVEIVYD
Sbjct: 109 GRLYVGNLPFSMTSSQLADIFAEAGTVVSVEIVYD 143
>ref|XP_019177767.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Ipomoea nil]
Length = 352
Score = 63.5 bits (153), Expect = 2e-08
Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 4/49 (8%)
Frame = +1
Query: 424 DGD----VAQPAAGGRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
DGD +Q A GRL+VGNLPF++TS+QLSEIF+EAGRV VE+VYD
Sbjct: 121 DGDNGSVESQSAEAGRLFVGNLPFSLTSSQLSEIFSEAGRVSKVEVVYD 169
>ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Cicer
arietinum]
Length = 318
Score = 63.2 bits (152), Expect = 2e-08
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = +1
Query: 454 GRLYVGNLPFTMTSAQLSEIFAEAGRVVSVEIVYD 558
GRLYVGNLPF++TS+QL+EIFAEAG VVSVEIVYD
Sbjct: 108 GRLYVGNLPFSITSSQLAEIFAEAGTVVSVEIVYD 142