BLASTX nr result

ID: Rehmannia29_contig00015812 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00015812
         (820 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020550478.1| pentatricopeptide repeat-containing protein ...    60   2e-06
ref|XP_011081936.1| pentatricopeptide repeat-containing protein ...    60   2e-06

>ref|XP_020550478.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial isoform X2 [Sesamum indicum]
          Length = 821

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = -1

Query: 820 MLDRGLAPDDATYDILVSGKFKESISPQGALSV 722
           MLDRGLAPDD TYDILVSGKFKE+ SP GALSV
Sbjct: 789 MLDRGLAPDDTTYDILVSGKFKENSSPLGALSV 821


>ref|XP_011081936.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial isoform X1 [Sesamum indicum]
 ref|XP_011081937.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial isoform X1 [Sesamum indicum]
 ref|XP_011081938.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial isoform X1 [Sesamum indicum]
 ref|XP_011081939.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial isoform X1 [Sesamum indicum]
          Length = 859

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = -1

Query: 820 MLDRGLAPDDATYDILVSGKFKESISPQGALSV 722
           MLDRGLAPDD TYDILVSGKFKE+ SP GALSV
Sbjct: 827 MLDRGLAPDDTTYDILVSGKFKENSSPLGALSV 859


Top