BLASTX nr result
ID: Rehmannia29_contig00015750
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00015750
(403 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_023765131.1| ribosome production factor 1 [Lactuca sativa... 75 2e-13
gb|KVI11049.1| Anticodon-binding [Cynara cardunculus var. scolymus] 75 3e-13
ref|XP_019431721.1| PREDICTED: ribosome production factor 1-like... 74 6e-13
ref|XP_019462420.1| PREDICTED: ribosome production factor 1-like... 74 6e-13
gb|EOX95528.1| Ribosomal RNA processing Brix domain protein isof... 74 6e-13
ref|XP_007051370.2| PREDICTED: ribosome production factor 1 isof... 74 1e-12
gb|EOX95527.1| Ribosomal RNA processing Brix domain protein isof... 74 1e-12
ref|XP_021280134.1| ribosome production factor 1 [Herrania umbra... 74 1e-12
ref|XP_007051369.2| PREDICTED: ribosome production factor 1 isof... 74 1e-12
gb|EOX95526.1| Ribosomal RNA processing Brix domain protein isof... 74 1e-12
ref|XP_010652999.1| PREDICTED: ribosome production factor 1 isof... 73 1e-12
ref|XP_010054928.1| PREDICTED: ribosome production factor 1 [Euc... 74 1e-12
emb|CBI21662.3| unnamed protein product, partial [Vitis vinifera] 73 1e-12
gb|PIN10377.1| Ribosome biogenesis protein RPF1, contains IMP4 d... 73 1e-12
ref|XP_011077098.1| ribosome production factor 1 [Sesamum indicum] 73 1e-12
ref|NP_001275160.1| ribosome production factor 1-like [Solanum t... 73 1e-12
gb|KHN15862.1| Ribosome production factor 1 [Glycine soja] 73 1e-12
ref|XP_002268541.2| PREDICTED: ribosome production factor 1 isof... 73 1e-12
gb|KRH47744.1| hypothetical protein GLYMA_07G047700 [Glycine max] 73 1e-12
ref|XP_021824371.1| ribosome production factor 1 [Prunus avium] 73 2e-12
>ref|XP_023765131.1| ribosome production factor 1 [Lactuca sativa]
gb|PLY84474.1| hypothetical protein LSAT_7X76501 [Lactuca sativa]
Length = 358
Score = 75.5 bits (184), Expect = 2e-13
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 320 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 352
>gb|KVI11049.1| Anticodon-binding [Cynara cardunculus var. scolymus]
Length = 386
Score = 75.5 bits (184), Expect = 3e-13
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 348 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 380
>ref|XP_019431721.1| PREDICTED: ribosome production factor 1-like [Lupinus
angustifolius]
gb|OIW20783.1| hypothetical protein TanjilG_23163 [Lupinus angustifolius]
Length = 352
Score = 74.3 bits (181), Expect = 6e-13
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKLTSLQHGTFDT+GGEYEWVHKPEMDTS
Sbjct: 314 PRFTLKLTSLQHGTFDTRGGEYEWVHKPEMDTS 346
>ref|XP_019462420.1| PREDICTED: ribosome production factor 1-like [Lupinus
angustifolius]
gb|OIW02369.1| hypothetical protein TanjilG_08516 [Lupinus angustifolius]
Length = 352
Score = 74.3 bits (181), Expect = 6e-13
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKLTSLQHGTFDT+GGEYEWVHKPEMDTS
Sbjct: 314 PRFTLKLTSLQHGTFDTRGGEYEWVHKPEMDTS 346
>gb|EOX95528.1| Ribosomal RNA processing Brix domain protein isoform 3, partial
[Theobroma cacao]
Length = 274
Score = 73.6 bits (179), Expect = 6e-13
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 236 PRFTLKLVSLQHGTFDTKGGEYEWVHKPEMDTS 268
>ref|XP_007051370.2| PREDICTED: ribosome production factor 1 isoform X2 [Theobroma
cacao]
Length = 326
Score = 73.6 bits (179), Expect = 1e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 288 PRFTLKLVSLQHGTFDTKGGEYEWVHKPEMDTS 320
>gb|EOX95527.1| Ribosomal RNA processing Brix domain protein isoform 2 [Theobroma
cacao]
Length = 326
Score = 73.6 bits (179), Expect = 1e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 288 PRFTLKLVSLQHGTFDTKGGEYEWVHKPEMDTS 320
>ref|XP_021280134.1| ribosome production factor 1 [Herrania umbratica]
Length = 354
Score = 73.6 bits (179), Expect = 1e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 316 PRFTLKLVSLQHGTFDTKGGEYEWVHKPEMDTS 348
>ref|XP_007051369.2| PREDICTED: ribosome production factor 1 isoform X1 [Theobroma
cacao]
Length = 354
Score = 73.6 bits (179), Expect = 1e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 316 PRFTLKLVSLQHGTFDTKGGEYEWVHKPEMDTS 348
>gb|EOX95526.1| Ribosomal RNA processing Brix domain protein isoform 1 [Theobroma
cacao]
Length = 354
Score = 73.6 bits (179), Expect = 1e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 316 PRFTLKLVSLQHGTFDTKGGEYEWVHKPEMDTS 348
>ref|XP_010652999.1| PREDICTED: ribosome production factor 1 isoform X2 [Vitis vinifera]
Length = 305
Score = 73.2 bits (178), Expect = 1e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 267 PRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTS 299
>ref|XP_010054928.1| PREDICTED: ribosome production factor 1 [Eucalyptus grandis]
gb|KCW89926.1| hypothetical protein EUGRSUZ_A02139 [Eucalyptus grandis]
Length = 365
Score = 73.6 bits (179), Expect = 1e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 327 PRFTLKLVSLQHGTFDTKGGEYEWVHKPEMDTS 359
>emb|CBI21662.3| unnamed protein product, partial [Vitis vinifera]
Length = 319
Score = 73.2 bits (178), Expect = 1e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 281 PRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTS 313
>gb|PIN10377.1| Ribosome biogenesis protein RPF1, contains IMP4 domain
[Handroanthus impetiginosus]
Length = 328
Score = 73.2 bits (178), Expect = 1e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 290 PRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTS 322
>ref|XP_011077098.1| ribosome production factor 1 [Sesamum indicum]
Length = 328
Score = 73.2 bits (178), Expect = 1e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 290 PRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTS 322
>ref|NP_001275160.1| ribosome production factor 1-like [Solanum tuberosum]
gb|ABB86266.1| putative RNA processing factor 1-like [Solanum tuberosum]
Length = 335
Score = 73.2 bits (178), Expect = 1e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 297 PRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTS 329
>gb|KHN15862.1| Ribosome production factor 1 [Glycine soja]
Length = 340
Score = 73.2 bits (178), Expect = 1e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 302 PRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTS 334
>ref|XP_002268541.2| PREDICTED: ribosome production factor 1 isoform X1 [Vitis vinifera]
ref|XP_010652998.1| PREDICTED: ribosome production factor 1 isoform X1 [Vitis vinifera]
Length = 346
Score = 73.2 bits (178), Expect = 1e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 308 PRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTS 340
>gb|KRH47744.1| hypothetical protein GLYMA_07G047700 [Glycine max]
Length = 347
Score = 73.2 bits (178), Expect = 1e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 309 PRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTS 341
>ref|XP_021824371.1| ribosome production factor 1 [Prunus avium]
Length = 348
Score = 73.2 bits (178), Expect = 2e-12
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 403 PRFTLKLTSLQHGTFDTKGGEYEWVHKPEMDTS 305
PRFTLKL SLQHGTFDTKGGEYEWVHKPEMDTS
Sbjct: 310 PRFTLKLLSLQHGTFDTKGGEYEWVHKPEMDTS 342