BLASTX nr result

ID: Rehmannia29_contig00015742 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00015742
         (433 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN13162.1| hypothetical protein CDL12_14218 [Handroanthus im...    63   3e-10
prf||1102209B ORF 1                                                    52   1e-06

>gb|PIN13162.1| hypothetical protein CDL12_14218 [Handroanthus impetiginosus]
          Length = 92

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = -3

Query: 242 MKSRKDGRIKITVRNQEMEERKFYEFTKTLWIETKK 135
           MKSRKDGRI+IT RN+EM E+KFY FTKT WIETKK
Sbjct: 1   MKSRKDGRIEITTRNKEMAEQKFYGFTKTRWIETKK 36


>prf||1102209B ORF 1
          Length = 41

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -3

Query: 254 LNKEMKSRKDGRIKITVRNQEMEERKFYEFTKTLWIETKKEISK 123
           +NK MKSR +        NQEMEERK Y FTKTLW+++KK+ISK
Sbjct: 1   MNKRMKSRNNST---NSSNQEMEERKSYGFTKTLWLKSKKDISK 41


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