BLASTX nr result

ID: Rehmannia29_contig00015740 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00015740
         (455 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011069983.1| UBP1-associated protein 2A-like [Sesamum ind...    84   5e-16
gb|PIN06420.1| RNA-binding protein musashi/mRNA cleavage and pol...    77   1e-13
gb|KZV27389.1| hypothetical protein F511_02498 [Dorcoceras hygro...    57   1e-06
ref|XP_012839543.1| PREDICTED: UBP1-associated protein 2B [Eryth...    57   2e-06

>ref|XP_011069983.1| UBP1-associated protein 2A-like [Sesamum indicum]
          Length = 442

 Score = 84.0 bits (206), Expect = 5e-16
 Identities = 48/89 (53%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
 Frame = +3

Query: 3   AAGYNPAGL-----SAPIAGMSGNYAI---SPSVMGNYGSQAALHGLGAFQNAQXXXXXX 158
           AAGYNPAGL     S PIAGM+GNY I   SP V+GNYGSQAALHGLGAFQNAQ      
Sbjct: 354 AAGYNPAGLVASGLSTPIAGMTGNYGINSMSPGVIGNYGSQAALHGLGAFQNAQTGQTSM 413

Query: 159 XXXXXXXXXXXXXXXXXXXPITYPSYFGR 245
                              P T+PSYF R
Sbjct: 414 GTAATATTATRAPTSGVSTPATFPSYFSR 442


>gb|PIN06420.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
           factor I complex, subunit HRP1 [Handroanthus
           impetiginosus]
          Length = 435

 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 45/84 (53%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = +3

Query: 3   AAGYNPAGLSAPIAGMSGNY---AISPSVMGNYGSQAALHGLGAFQNAQXXXXXXXXXXX 173
           AAGYNPAGL A  +G+SGNY   +ISP+VMGNYGSQAALHGLGAFQN Q           
Sbjct: 354 AAGYNPAGLVA--SGLSGNYGINSISPNVMGNYGSQAALHGLGAFQNPQLGPSSVGTVAT 411

Query: 174 XXXXXXXXXXXXXXPITYPSYFGR 245
                          IT+PSYF R
Sbjct: 412 ATTATRAPTSVVSSSITFPSYFKR 435


>gb|KZV27389.1| hypothetical protein F511_02498 [Dorcoceras hygrometricum]
          Length = 442

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 31/54 (57%), Positives = 37/54 (68%), Gaps = 8/54 (14%)
 Frame = +3

Query: 3   AAGYNPA-----GLSAPIAGMSGNY---AISPSVMGNYGSQAALHGLGAFQNAQ 140
           AAGYN A     GLS+   GM  NY   ++SPSVMG YGSQAA +G+G FQ+AQ
Sbjct: 355 AAGYNSANLMSSGLSSSFGGMGSNYGMNSLSPSVMGRYGSQAAFNGIGPFQSAQ 408


>ref|XP_012839543.1| PREDICTED: UBP1-associated protein 2B [Erythranthe guttata]
 gb|EYU35639.1| hypothetical protein MIMGU_mgv1a006264mg [Erythranthe guttata]
          Length = 450

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/54 (61%), Positives = 38/54 (70%), Gaps = 8/54 (14%)
 Frame = +3

Query: 3   AAGYNPAGLSAPI--AGMSGN-YAIS-----PSVMGNYGSQAALHGLGAFQNAQ 140
           +AGYNP G S P+  AG+ G  Y IS     PS++GNYGSQAAL GLGAFQN Q
Sbjct: 359 SAGYNPVGFSNPMFAAGLGGGGYGISNSMTGPSMIGNYGSQAALLGLGAFQNNQ 412


Top