BLASTX nr result
ID: Rehmannia29_contig00015622
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00015622
(1895 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PRQ15682.1| putative DNA-directed RNA polymerase (chloroplast... 451 0.0
ref|YP_009353974.1| RNA polymerase alpha subunit (chloroplast) [... 532 0.0
ref|YP_009354237.1| RNA polymerase alpha subunit (chloroplast) [... 526 0.0
ref|YP_009344468.1| RNA polymerase alpha subunit (chloroplast) [... 526 0.0
gb|AVM81934.1| RNA polymerase alpha subunit (chloroplast) [Tecom... 516 e-177
ref|YP_009309483.1| RNA polymerase alpha subunit (chloroplast) [... 516 e-177
ref|YP_009354062.1| RNA polymerase alpha subunit (chloroplast) [... 516 e-177
gb|AKZ23818.1| RNA polymerase alpha subunit (plastid) [Verbena h... 512 e-176
ref|YP_009316344.1| RNA polymerase alpha subunit (plastid) [Cast... 512 e-176
gb|AVM82710.1| RNA polymerase alpha subunit (chloroplast) [Podra... 511 e-176
gb|ALO62155.1| RNA polymerase alpha subunit (chloroplast) [Cresc... 510 e-175
ref|YP_004935698.1| RNA polymerase alpha subunit (chloroplast) [... 510 e-175
gb|ANX10198.1| RNA polymerase alpha subunit (chloroplast) [Triph... 509 e-175
ref|YP_009420926.1| RNA polymerase alpha subunit (chloroplast) [... 508 e-174
gb|AUT84085.1| RNA polymerase alpha subunit (chloroplast) [Fonta... 508 e-174
ref|YP_009459731.1| RNA polymerase alpha subunit (chloroplast) [... 508 e-174
ref|YP_009309657.1| RNA polymerase alpha subunit (chloroplast) [... 508 e-174
ref|YP_009183624.1| RNA polymerase alpha subunit (chloroplast) [... 507 e-174
ref|YP_009117253.1| RNA polymerase alpha subunit (chloroplast) [... 506 e-174
ref|YP_009443978.1| RNA polymerase alpha subunit (chloroplast) [... 506 e-174
>gb|PRQ15682.1| putative DNA-directed RNA polymerase (chloroplast) [Rosa chinensis]
Length = 464
Score = 451 bits (1161), Expect(2) = 0.0
Identities = 226/279 (81%), Positives = 240/279 (86%)
Frame = -2
Query: 838 REKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTSI 659
R KVTVSTRTLQWKCVESR DSKRLYYGRFIL+PLMKGQADTIGIAMRRALLGEIEGT I
Sbjct: 136 RRKVTVSTRTLQWKCVESRADSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGTCI 195
Query: 658 TRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQDMI 479
TR + E +PHEYSTI GIQESVHEILMNLKEIVLRSNLYGT +ASICV+GPGYVTAQD+I
Sbjct: 196 TRARSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRNASICVKGPGYVTAQDII 255
Query: 478 LPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVRNV 299
LPP VEI+DNTQHIA+LTEPINLCI L+IERNRGY IK P+NFQDGSYP+DAVFMPVRN
Sbjct: 256 LPPSVEIVDNTQHIANLTEPINLCIQLQIERNRGYRIKTPNNFQDGSYPIDAVFMPVRNA 315
Query: 298 NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLEDN 119
NHSIHSY NGNEKQEILF+EIWTNGSLTPKEALHEASRNLIDLFIPFLH EEEN E+N
Sbjct: 316 NHSIHSYVNGNEKQEILFIEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENFHFENN 375
Query: 118 QHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
QH V L FTFH+ K IFIDQ EL P
Sbjct: 376 QHKVTLPLFTFHDKFANPRKSKTEITLKYIFIDQSELPP 414
Score = 227 bits (578), Expect(2) = 0.0
Identities = 114/130 (87%), Positives = 119/130 (91%)
Frame = -3
Query: 1332 MAKAIPRTGSRRNVRIGSRKSARRIPKGVIHVQASFNNTIVTVTDVRGQVISWSSAGTCG 1153
MAK IP+ GSRRN RIGSRK+ARRIPKGVIHVQASFNNTIVTVTDVRG+VISWSSAGTCG
Sbjct: 1 MAKPIPKIGSRRNRRIGSRKNARRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 1152 FKGTRRGTPFXXXXXXXXAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 973
FKGTRRGTPF AIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILL+F+R
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFIR 120
Query: 972 DVTPMPHNGC 943
DVTPMPHNGC
Sbjct: 121 DVTPMPHNGC 130
>ref|YP_009353974.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia glutinosa]
gb|AQZ40505.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia glutinosa]
Length = 337
Score = 532 bits (1370), Expect = 0.0
Identities = 266/281 (94%), Positives = 266/281 (94%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
SITRVK ENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 SITRVKSENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR
Sbjct: 121 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQHMVPLSPFTFHE KSIFIDQFELSP
Sbjct: 241 DNQHMVPLSPFTFHEKLDKLRKNKKKIALKSIFIDQFELSP 281
>ref|YP_009354237.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia piasezkii]
gb|AQZ40767.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia piasezkii]
Length = 337
Score = 526 bits (1355), Expect = 0.0
Identities = 262/281 (93%), Positives = 265/281 (94%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVK ENVPHEYSTITGIQESVHEILMNLKEIVL+SNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CITRVKSENVPHEYSTITGIQESVHEILMNLKEIVLKSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR
Sbjct: 121 IILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQHMVPLSPFTFH+ KSIFIDQFELSP
Sbjct: 241 DNQHMVPLSPFTFHDKLDKLRKNKKKIALKSIFIDQFELSP 281
>ref|YP_009344468.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia chingii]
ref|YP_009354324.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia elata]
gb|APT42264.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia chingii]
gb|AQZ40854.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia elata]
Length = 337
Score = 526 bits (1355), Expect = 0.0
Identities = 262/281 (93%), Positives = 265/281 (94%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVK ENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CITRVKSENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR
Sbjct: 121 IILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQHMVPLSPFTFH+ KSIFIDQF+LSP
Sbjct: 241 DNQHMVPLSPFTFHDKLDKLRKNKKKIALKSIFIDQFQLSP 281
>gb|AVM81934.1| RNA polymerase alpha subunit (chloroplast) [Tecomaria capensis]
Length = 334
Score = 516 bits (1329), Expect = e-177
Identities = 256/281 (91%), Positives = 261/281 (92%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFIL+PLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVK E VPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVT QD
Sbjct: 61 CITRVKSEKVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTTQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEI+DNTQHIASLTEPINLCIGLEIERNRGYL KMPHNFQDGSYP+DAVFMPVR
Sbjct: 121 IILPPYVEIVDNTQHIASLTEPINLCIGLEIERNRGYLRKMPHNFQDGSYPIDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQH VPLSPFTFH+ KSIFIDQFELSP
Sbjct: 241 DNQHTVPLSPFTFHDKLDKLRKNKKKIALKSIFIDQFELSP 281
>ref|YP_009309483.1| RNA polymerase alpha subunit (chloroplast) [Paulownia coreana]
ref|YP_009309570.1| RNA polymerase alpha subunit (chloroplast) [Paulownia tomentosa]
gb|AKM21544.1| RNA polymerase alpha subunit (chloroplast) [Paulownia coreana]
gb|AKM21631.1| RNA polymerase alpha subunit (chloroplast) [Paulownia tomentosa]
Length = 337
Score = 516 bits (1329), Expect = e-177
Identities = 257/281 (91%), Positives = 262/281 (93%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVK ENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CITRVKSENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEI+DNTQHIASLTEPINLCIGLEIE+NRGYLIKMPHNFQDGSYP+DAVFMPVR
Sbjct: 121 IILPPYVEIVDNTQHIASLTEPINLCIGLEIEKNRGYLIKMPHNFQDGSYPIDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL KEEENLPLE
Sbjct: 181 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLDKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQH VPLSPFTFH+ KSIFIDQ ELSP
Sbjct: 241 DNQHTVPLSPFTFHDKLNKLRKNKKKIALKSIFIDQSELSP 281
>ref|YP_009354062.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia henryi]
ref|YP_009354149.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia solanifolia]
gb|AQZ40592.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia henryi]
gb|AQZ40680.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia solanifolia]
Length = 335
Score = 516 bits (1328), Expect = e-177
Identities = 260/281 (92%), Positives = 263/281 (93%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQA+TIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQANTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVK ENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CITRVKSENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR
Sbjct: 121 IILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSY GNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181 NVNHSIHSY--GNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 238
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQHMVPLSPFTFH+ KSIFIDQFELSP
Sbjct: 239 DNQHMVPLSPFTFHDKLDKLRKNKKKIALKSIFIDQFELSP 279
>gb|AKZ23818.1| RNA polymerase alpha subunit (plastid) [Verbena hastata]
Length = 331
Score = 512 bits (1319), Expect = e-176
Identities = 255/281 (90%), Positives = 261/281 (92%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVK +NVPHEYSTI GIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CITRVKSKNVPHEYSTIRGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEIIDNTQHIASLTEP+NLCIGLEIERNRGYL KMPHNFQDGSYP+DA+FMPVR
Sbjct: 121 IILPPYVEIIDNTQHIASLTEPMNLCIGLEIERNRGYLRKMPHNFQDGSYPIDAIFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQH V LSPFTFH+ KSIFIDQFELSP
Sbjct: 241 DNQHTVCLSPFTFHDKLDKLRTNKKKIALKSIFIDQFELSP 281
>ref|YP_009316344.1| RNA polymerase alpha subunit (plastid) [Castilleja paramensis]
gb|ANJ04304.1| RNA polymerase alpha subunit (plastid) [Castilleja paramensis]
Length = 337
Score = 512 bits (1318), Expect = e-176
Identities = 251/281 (89%), Positives = 260/281 (92%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESR DSKR YYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRFYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVKF+NVPHEY+TITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CITRVKFQNVPHEYATITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEI+DN QHIASLTEP+NLCIGLEIERNRGYL+KMPHNFQDGSYP+DAVFMPVR
Sbjct: 121 IILPPYVEIVDNIQHIASLTEPVNLCIGLEIERNRGYLLKMPHNFQDGSYPIDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENL E
Sbjct: 181 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLLFE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DN+H +PLSPFTFHE KSIFIDQFELSP
Sbjct: 241 DNEHTIPLSPFTFHEKLDKLRKNKKKIALKSIFIDQFELSP 281
>gb|AVM82710.1| RNA polymerase alpha subunit (chloroplast) [Podranea ricasoliana]
Length = 337
Score = 511 bits (1317), Expect = e-176
Identities = 254/281 (90%), Positives = 260/281 (92%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFIL+PLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAIRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVK E VPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVT QD
Sbjct: 61 CITRVKSEKVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTTQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEI+DNTQHIASLTEPINLCIGLEIERNRGYL KMPHNFQDGSYP+DAVFMPVR
Sbjct: 121 IILPPYVEIVDNTQHIASLTEPINLCIGLEIERNRGYLRKMPHNFQDGSYPIDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQH VPLSPFTFH+ KSIFIDQ ELSP
Sbjct: 241 DNQHTVPLSPFTFHDKLDKLRKNKKKIALKSIFIDQSELSP 281
>gb|ALO62155.1| RNA polymerase alpha subunit (chloroplast) [Crescentia cujete]
Length = 337
Score = 510 bits (1313), Expect = e-175
Identities = 254/281 (90%), Positives = 260/281 (92%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKV VSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVRVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVK ENVPHEYSTITGIQESVHEIL+NLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CITRVKSENVPHEYSTITGIQESVHEILINLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEI+D TQHIASLTEPI+LCIGLEIERNRGYL KMPHNFQDGSYP+DAVFMPVR
Sbjct: 121 IILPPYVEIVDKTQHIASLTEPIHLCIGLEIERNRGYLRKMPHNFQDGSYPIDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQH VPLSPFTFH+ KSIFIDQ ELSP
Sbjct: 241 DNQHTVPLSPFTFHDKLDKLRKNKKKIALKSIFIDQSELSP 281
>ref|YP_004935698.1| RNA polymerase alpha subunit (chloroplast) [Sesamum indicum]
gb|AEO92738.1| RNA polymerase alpha subunit (chloroplast) [Sesamum indicum]
gb|AGL45368.1| RpoA (chloroplast) [Sesamum indicum]
Length = 337
Score = 510 bits (1313), Expect = e-175
Identities = 254/281 (90%), Positives = 260/281 (92%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVK ENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICV+GPGYVTAQD
Sbjct: 61 CITRVKSENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVKGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEI+DNTQHIASLTEPI+ CIGLEIERNRGYLIKMP NFQDGSYP+DAVFMPVR
Sbjct: 121 IILPPYVEIVDNTQHIASLTEPIHFCIGLEIERNRGYLIKMPQNFQDGSYPIDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQ VPLSPFTFH+ KSIFIDQ ELSP
Sbjct: 241 DNQRTVPLSPFTFHDKLDKLRKNKNKIALKSIFIDQSELSP 281
>gb|ANX10198.1| RNA polymerase alpha subunit (chloroplast) [Triphysaria versicolor]
Length = 337
Score = 509 bits (1310), Expect = e-175
Identities = 250/281 (88%), Positives = 259/281 (92%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESR DSKR YYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRFYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVKF+NVPHEY+TITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CITRVKFQNVPHEYATITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEI+DN QHIASLTEP+NLCI LEIERNRGYL+KMPHNFQDGSYP+DAVFMPVR
Sbjct: 121 IILPPYVEIVDNIQHIASLTEPVNLCIQLEIERNRGYLLKMPHNFQDGSYPIDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENL E
Sbjct: 181 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLLFE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DN+H +PLSPFTFHE KSIFIDQFELSP
Sbjct: 241 DNEHTIPLSPFTFHEKLDKLRKNKKKIALKSIFIDQFELSP 281
>ref|YP_009420926.1| RNA polymerase alpha subunit (chloroplast) [Caryopteris mongholica]
gb|ASQ40511.1| RNA polymerase alpha subunit (chloroplast) [Caryopteris mongholica]
Length = 339
Score = 508 bits (1309), Expect = e-174
Identities = 256/283 (90%), Positives = 261/283 (92%), Gaps = 2/283 (0%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVK ENVPHEYSTITGIQESVHEI+MNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CITRVKSENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPH--NFQDGSYPLDAVFMP 311
+ILP YVEI+DNTQHIASLTEPINLCIGLEIERNRGYLIKMPH NFQDGSYP+DAVFMP
Sbjct: 121 IILPTYVEIVDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFNFQDGSYPIDAVFMP 180
Query: 310 VRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLP 131
VRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL+KEEENLP
Sbjct: 181 VRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLYKEEENLP 240
Query: 130 LEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
LEDNQH VPL PFTFHE KSIFIDQ ELSP
Sbjct: 241 LEDNQHTVPLYPFTFHEKLDKVRKNKKKIALKSIFIDQSELSP 283
>gb|AUT84085.1| RNA polymerase alpha subunit (chloroplast) [Fontanesia
phillyreoides subsp. fortunei]
Length = 337
Score = 508 bits (1307), Expect = e-174
Identities = 252/281 (89%), Positives = 258/281 (91%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESREDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVK ENVPHEYSTI GIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CITRVKSENVPHEYSTIAGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEI+DNTQHIASLTEPI+LCIGL+IERNRGYLIKMPHNFQDGSYP+DAVFMPVR
Sbjct: 121 IILPPYVEIVDNTQHIASLTEPIDLCIGLQIERNRGYLIKMPHNFQDGSYPIDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
N NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEA RNLIDLFIPFLHKEEENLPLE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEACRNLIDLFIPFLHKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQH VPLSP TFH+ KSIFIDQ ELSP
Sbjct: 241 DNQHTVPLSPLTFHDKLDKLRKKKKKKALKSIFIDQSELSP 281
>ref|YP_009459731.1| RNA polymerase alpha subunit (chloroplast) [Scrophularia henryi]
gb|AUT13377.1| RNA polymerase alpha subunit (chloroplast) [Scrophularia henryi]
Length = 337
Score = 508 bits (1307), Expect = e-174
Identities = 253/281 (90%), Positives = 259/281 (92%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVK ENV HEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CITRVKSENVSHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEI+DNTQHIASLTEPIN CIGLEIERNRGYL+KMPHNFQDGSYP+DAVFMPVR
Sbjct: 121 IILPPYVEIVDNTQHIASLTEPINFCIGLEIERNRGYLLKMPHNFQDGSYPIDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSYGN NEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181 NVNHSIHSYGNENEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQH V LSPF+FH+ KSIFIDQ ELSP
Sbjct: 241 DNQHTVSLSPFSFHDKFDKLRKNKKKIALKSIFIDQSELSP 281
>ref|YP_009309657.1| RNA polymerase alpha subunit (chloroplast) [Scrophularia
buergeriana]
gb|AKM21717.1| RNA polymerase alpha subunit (chloroplast) [Scrophularia
buergeriana]
Length = 337
Score = 508 bits (1307), Expect = e-174
Identities = 253/281 (90%), Positives = 260/281 (92%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVK ENV HEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CITRVKSENVSHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEI+DNTQHIASLTEPINLCIGLEIERNRGYL+KMPHNFQDGSYP+DAVFMPVR
Sbjct: 121 IILPPYVEIVDNTQHIASLTEPINLCIGLEIERNRGYLLKMPHNFQDGSYPIDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSYGN NEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181 NVNHSIHSYGNENEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQH V LSPF+FH+ KSIFIDQ ELSP
Sbjct: 241 DNQHTVSLSPFSFHDKFDKLRKNKKKIALKSIFIDQSELSP 281
>ref|YP_009183624.1| RNA polymerase alpha subunit (chloroplast) [Scutellaria insignis]
gb|ALN11634.1| RNA polymerase alpha subunit (chloroplast) [Scutellaria insignis]
Length = 337
Score = 507 bits (1305), Expect = e-174
Identities = 253/281 (90%), Positives = 259/281 (92%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRSLLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITRVK ENVPHEYSTITGIQESVHEI+MNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CITRVKSENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEI+DNTQHIASL EPINLCIGLEIERNRGYLIKMPHNFQDGSYP+DAVFMPVR
Sbjct: 121 IILPPYVEIVDNTQHIASLAEPINLCIGLEIERNRGYLIKMPHNFQDGSYPIDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSY NGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL+KEEENLPLE
Sbjct: 181 NVNHSIHSYENGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLYKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQH PLSPFT HE KSIFIDQ ELSP
Sbjct: 241 DNQHGGPLSPFTLHEKLDKVRKKKKKIALKSIFIDQSELSP 281
>ref|YP_009117253.1| RNA polymerase alpha subunit (chloroplast) [Premna microphylla]
gb|AJE28407.1| RNA polymerase alpha subunit (chloroplast) [Premna microphylla]
Length = 336
Score = 506 bits (1304), Expect = e-174
Identities = 250/281 (88%), Positives = 260/281 (92%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVT STRTLQWKCVESRTD KRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTASTRTLQWKCVESRTDGKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
+TRVK ENVPHEYSTITGIQESVHEI+MNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CLTRVKSENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEI+DNTQHIASLTEPI+LCIGLEIERNRGYL+KMP+NFQDGSYP+DAVFMPVR
Sbjct: 121 IILPPYVEIVDNTQHIASLTEPISLCIGLEIERNRGYLVKMPNNFQDGSYPIDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL+KEEENLPLE
Sbjct: 181 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLYKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQH VPLSPF FH+ KSIFIDQ ELSP
Sbjct: 241 DNQHTVPLSPFPFHDKLDKARKNKKKIALKSIFIDQSELSP 281
>ref|YP_009443978.1| RNA polymerase alpha subunit (chloroplast) [Forsythia suspensa]
ref|YP_009462023.1| RNA polymerase alpha subunit (chloroplast) [Forsythia x intermedia]
gb|ATU07198.1| RNA polymerase alpha subunit (chloroplast) [Forsythia suspensa]
gb|AUT84260.1| RNA polymerase alpha subunit (chloroplast) [Forsythia x intermedia]
gb|AVE14973.1| RNA polymerase alpha subunit (chloroplast) [Forsythia saxatilis]
Length = 337
Score = 506 bits (1304), Expect = e-174
Identities = 251/281 (89%), Positives = 258/281 (91%)
Frame = -2
Query: 844 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 665
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESREDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 664 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 485
ITR+K ENVPHEYSTI GIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61 CITRIKPENVPHEYSTIAGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 484 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 305
+ILPPYVEI+DNTQHIASLTEPI+LCIGL+IERNRGYLIKMPHNFQDGSYP+DAVFMPVR
Sbjct: 121 IILPPYVEIVDNTQHIASLTEPIDLCIGLQIERNRGYLIKMPHNFQDGSYPIDAVFMPVR 180
Query: 304 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 125
N NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEA RNLIDLFIPFLHKEEENLPLE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEACRNLIDLFIPFLHKEEENLPLE 240
Query: 124 DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
DNQH VPLSP TFH+ KSIFIDQ ELSP
Sbjct: 241 DNQHTVPLSPLTFHDKFDKLRKNKKKKALKSIFIDQSELSP 281