BLASTX nr result

ID: Rehmannia29_contig00014439 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00014439
         (404 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN23994.1| hypothetical protein CDL12_03297 [Handroanthus im...   134   3e-36
ref|XP_011081597.1| ylmG homolog protein 2, chloroplastic [Sesam...   109   1e-26
ref|XP_012857757.1| PREDICTED: uncharacterized protein LOC105977...    88   1e-18

>gb|PIN23994.1| hypothetical protein CDL12_03297 [Handroanthus impetiginosus]
          Length = 257

 Score =  134 bits (336), Expect = 3e-36
 Identities = 69/102 (67%), Positives = 82/102 (80%)
 Frame = +1

Query: 88  MKSFSSAKDDEQNFAANAQISDFPTFPISSTPFSFVHSTPFFRQPFSSNHNFQLLTGASN 267
           M S SS+ +DEQ FAA     +   FP+SS PF+F++   FFRQPFSSN +FQLLTGASN
Sbjct: 1   MNSGSSSMEDEQKFAAKTPTLEI--FPLSSAPFNFINGNKFFRQPFSSNPSFQLLTGASN 58

Query: 268 VVREVQKSVASNVDKCLKLMDSLRSKNEVLDKIISFYSNLQS 393
           VVRE+QKSV SNVDKCLK+MD LRS+NEVLDKIISF S+L+S
Sbjct: 59  VVREIQKSVVSNVDKCLKMMDILRSQNEVLDKIISFPSHLES 100


>ref|XP_011081597.1| ylmG homolog protein 2, chloroplastic [Sesamum indicum]
          Length = 263

 Score =  109 bits (272), Expect = 1e-26
 Identities = 56/100 (56%), Positives = 70/100 (70%)
 Frame = +1

Query: 103 SAKDDEQNFAANAQISDFPTFPISSTPFSFVHSTPFFRQPFSSNHNFQLLTGASNVVREV 282
           S +D+ ++ A           P SS P +F+H TPFFRQP S N NF+LL GASNVVREV
Sbjct: 10  SLEDEHKSSALGPPSQFLMLLPFSSPPLNFIHCTPFFRQPLSLNPNFKLLMGASNVVREV 69

Query: 283 QKSVASNVDKCLKLMDSLRSKNEVLDKIISFYSNLQSGFQ 402
           QKS+ SNV+KCLK++D+ RS+  VLDKI+SF S LQ G Q
Sbjct: 70  QKSIMSNVEKCLKIVDNFRSQIAVLDKIMSFPSYLQYGCQ 109


>ref|XP_012857757.1| PREDICTED: uncharacterized protein LOC105977043 [Erythranthe
           guttata]
 gb|EYU20294.1| hypothetical protein MIMGU_mgv1a012313mg [Erythranthe guttata]
          Length = 254

 Score = 88.2 bits (217), Expect = 1e-18
 Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
 Frame = +1

Query: 166 PISSTPF--SFVHSTPFFRQPFSSNHNF-QLLTGASNVVREVQKSVASNVDKCLKLMDSL 336
           P SS P   +F+H+TPFFRQ    N NF  LL   SNVVRE+QKS+A NVDKCL+++ + 
Sbjct: 25  PFSSPPLILNFIHNTPFFRQASIPNPNFLPLLAQTSNVVRELQKSIACNVDKCLEMLVNF 84

Query: 337 RSKNEVLDKIISFYSNLQSGFQ 402
           RS+N VLDKI+SF S LQ G Q
Sbjct: 85  RSQNSVLDKIMSFSSYLQHGCQ 106


Top