BLASTX nr result

ID: Rehmannia29_contig00014397 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00014397
         (644 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit ...    68   1e-10
gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygro...    69   2e-10
gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit ...    64   2e-08

>gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit B-like [Dorcoceras
           hygrometricum]
          Length = 161

 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 40/127 (31%), Positives = 66/127 (51%)
 Frame = +3

Query: 120 QGDRIHGTIRKVNVAQFKNRLDEGHVYVIKDFSVAXXXXXXXXXXXXXXIQFHGKTHVFQ 299
           +GDRIH +++K  + + ++ L +GH++ IK+  VA              I F  KTHV +
Sbjct: 34  EGDRIHASVKKPVLDKVRHILKDGHLFAIKNIIVAENRMKYKTTTSKYKINFITKTHVCE 93

Query: 300 LDDNSLPRFLFNFKSFRDLASVENVDETILFGMY*IFILC*NCNCLRMILYRLILGRVVA 479
           + D+S P  +F+FKSF D+ + E ++ET+LF                      ++G+VVA
Sbjct: 94  IFDDSFPSIMFDFKSFNDVKNAE-IEETMLFD---------------------VIGQVVA 131

Query: 480 MQSAQSK 500
             S QS+
Sbjct: 132 RDSPQSR 138


>gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygrometricum]
          Length = 250

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 36/92 (39%), Positives = 55/92 (59%)
 Frame = +3

Query: 120 QGDRIHGTIRKVNVAQFKNRLDEGHVYVIKDFSVAXXXXXXXXXXXXXXIQFHGKTHVFQ 299
           +GDRIH +++K  + + K  L EGH++ IK+  VA              I F  KTHV +
Sbjct: 34  EGDRIHASVKKPVLDRVKPILKEGHLFAIKNIIVAENRMKYKTTASKYKINFITKTHVCE 93

Query: 300 LDDNSLPRFLFNFKSFRDLASVENVDETILFG 395
           + D+S P  +F+FKSF ++ + E +DET+LFG
Sbjct: 94  IFDDSFPSMMFDFKSFTNVKNAE-IDETMLFG 124


>gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit [Dorcoceras
           hygrometricum]
          Length = 388

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 41/126 (32%), Positives = 62/126 (49%)
 Frame = +3

Query: 123 GDRIHGTIRKVNVAQFKNRLDEGHVYVIKDFSVAXXXXXXXXXXXXXXIQFHGKTHVFQL 302
           GD IH +I+K  +   +  L EGH++ IK+  VA              I F  KTHV ++
Sbjct: 115 GDHIHASIKKPVLDSVRPILKEGHLFAIKNIIVAENRMKYKTTASKYKINFITKTHVCEI 174

Query: 303 DDNSLPRFLFNFKSFRDLASVENVDETILFGMY*IFILC*NCNCLRMILYRLILGRVVAM 482
            D+S P  +F+FKSF ++ + E ++ET+LF                      ++G+VVA 
Sbjct: 175 FDDSFPSMMFDFKSFTNVKNAE-IEETMLFD---------------------VIGQVVAR 212

Query: 483 QSAQSK 500
            S QSK
Sbjct: 213 DSPQSK 218


Top