BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00014362
         (580 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP51204.1| Retrovirus-related Pol polyprotein from transposo...   216   1e-68
gb|KYP31709.1| Retrovirus-related Pol polyprotein from transposo...   222   3e-65
gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposo...   222   2e-64
gb|KYP36550.1| Retrovirus-related Pol polyprotein from transposo...   211   5e-63
gb|KYP59031.1| Retrovirus-related Pol polyprotein from transposo...   207   1e-61
ref|XP_020112371.1| uncharacterized protein LOC109726957 isoform...   184   2e-50
gb|KZV26179.1| hypothetical protein F511_06346 [Dorcoceras hygro...   164   9e-47
gb|KZV36299.1| hypothetical protein F511_22414 [Dorcoceras hygro...   170   1e-46
gb|KZV25402.1| hypothetical protein F511_07286 [Dorcoceras hygro...   167   5e-46
gb|KZV48065.1| hypothetical protein F511_31040 [Dorcoceras hygro...   170   8e-46
gb|KZV26201.1| hypothetical protein F511_28547 [Dorcoceras hygro...   171   1e-45
gb|EEC75533.1| hypothetical protein OsI_12151 [Oryza sativa Indi...   160   7e-45
gb|KZV31144.1| hypothetical protein F511_24590 [Dorcoceras hygro...   168   7e-45
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] >gi|1...   168   8e-45
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]   168   1e-44
gb|KZV54798.1| hypothetical protein F511_04420 [Dorcoceras hygro...   162   8e-44
gb|KZV48684.1| hypothetical protein F511_26132 [Dorcoceras hygro...   157   2e-43
gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subc...   164   2e-43
gb|ABA93966.1| retrotransposon protein, putative, Ty1-copia subc...   164   2e-43
emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group]        164   2e-43

>gb|KYP51204.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 184

 Score =  216 bits (551), Expect = 1e-68
 Identities = 112/177 (63%), Positives = 135/177 (76%), Gaps = 2/177 (1%)
 Frame = +3

Query: 54  NGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESNKVVI 233
           NGS+A+V+G G+V+L LSSG  L LD V H+  IRKNLISA+LLV+ G+KVVFESN+VVI
Sbjct: 3   NGSLARVIGLGRVELELSSGNYLVLDEVFHVSKIRKNLISAALLVQQGFKVVFESNRVVI 62

Query: 234 SRHGLFIGKGFMLDGLFRLSVMP-XXXXXXXXXXXXIANVECCDTWHGRLGHVNSGTIKR 410
           SRH  F+GKG++ DGLF+LS+MP             I+NVECCD WHGRLGHVN  +IKR
Sbjct: 63  SRHCSFVGKGYICDGLFKLSIMPSFINKNSSISSSSISNVECCDIWHGRLGHVNLISIKR 122

Query: 411 MMHLDLIPKSSINVKEKCEICVQAKQPRKP-HKSVDKETMLLGLIHSDICDSNHVLT 578
           MM LDLIPKS   +K+KCE+CVQAKQP+K    SV KET +  LIHSDICDSN V+T
Sbjct: 123 MMTLDLIPKSFNELKQKCEVCVQAKQPKKSFQNSVQKETCVFKLIHSDICDSNGVIT 179


>gb|KYP31709.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 714

 Score =  222 bits (566), Expect = 3e-65
 Identities = 114/177 (64%), Positives = 137/177 (77%), Gaps = 2/177 (1%)
 Frame = +3

Query: 54  NGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESNKVVI 233
           NGS+A+V+G G+V+L LSSG  L LD V H+ +IRKNLISA+LLV+ G+KVVFESN+VVI
Sbjct: 248 NGSLARVIGLGRVELELSSGNCLVLDEVFHVSEIRKNLISAALLVQQGFKVVFESNRVVI 307

Query: 234 SRHGLFIGKGFMLDGLFRLSVM-PXXXXXXXXXXXXIANVECCDTWHGRLGHVNSGTIKR 410
           SRHG F+GKG++ DGLF+LS+M              I+NVECCD WHGRLGHVN  +IKR
Sbjct: 308 SRHGSFVGKGYICDGLFKLSIMSSFINKNSSISSSSISNVECCDIWHGRLGHVNLNSIKR 367

Query: 411 MMHLDLIPKSSINVKEKCEICVQAKQPRKP-HKSVDKETMLLGLIHSDICDSNHVLT 578
           MM LDLIPKS   +K+KCE+CVQAKQPRK    SV KET +L LIHSDICDSN V+T
Sbjct: 368 MMTLDLIPKSFNELKQKCEVCVQAKQPRKSFQNSVQKETCVLELIHSDICDSNGVIT 424


>gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 880

 Score =  222 bits (566), Expect = 2e-64
 Identities = 114/177 (64%), Positives = 137/177 (77%), Gaps = 2/177 (1%)
 Frame = +3

Query: 54  NGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESNKVVI 233
           NGS+A+V+G G+V+L LSSG  L LD V H+ +IRKNLISA+LLV+ G+KVVFESN+VVI
Sbjct: 250 NGSLARVIGLGRVELELSSGNCLVLDEVFHVSEIRKNLISAALLVQQGFKVVFESNRVVI 309

Query: 234 SRHGLFIGKGFMLDGLFRLSVM-PXXXXXXXXXXXXIANVECCDTWHGRLGHVNSGTIKR 410
           SRHG F+GKG++ DGLF+LS+M              I+NVECCD WHGRLGHVN  +IKR
Sbjct: 310 SRHGSFVGKGYICDGLFKLSIMSSFINKNSSISSSSISNVECCDIWHGRLGHVNLNSIKR 369

Query: 411 MMHLDLIPKSSINVKEKCEICVQAKQPRKP-HKSVDKETMLLGLIHSDICDSNHVLT 578
           MM LDLIPKS   +K+KCE+CVQAKQPRK    SV KET +L LIHSDICDSN V+T
Sbjct: 370 MMTLDLIPKSFNELKQKCEVCVQAKQPRKSFQNSVQKETCVLELIHSDICDSNGVIT 426


>gb|KYP36550.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 462

 Score =  211 bits (536), Expect = 5e-63
 Identities = 110/177 (62%), Positives = 132/177 (74%), Gaps = 2/177 (1%)
 Frame = +3

Query: 54  NGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESNKVVI 233
           NGS+A V+G  +V+L LSSG  L LD V H+  IRKNLISA+LLV+ G+KVVFESN+VVI
Sbjct: 248 NGSLASVIGLSRVELELSSGNCLVLDEVFHVSKIRKNLISAALLVQQGFKVVFESNRVVI 307

Query: 234 SRHGLFIGKGFMLDGLFRLSVM-PXXXXXXXXXXXXIANVECCDTWHGRLGHVNSGTIKR 410
           SRHG F+GKG++ DGLF+L++M              I+NVECCD WHGRLGHVN  +IKR
Sbjct: 308 SRHGSFVGKGYICDGLFKLNIMSSFINKNSSISSSSISNVECCDIWHGRLGHVNLNSIKR 367

Query: 411 MMHLDLIPKSSINVKEKCEICVQAKQPRKP-HKSVDKETMLLGLIHSDICDSNHVLT 578
           MM LDLIPKS   +K+KCE+CVQAKQPRK    SV KET +L LIH DI DSN V+T
Sbjct: 368 MMTLDLIPKSFNELKQKCEVCVQAKQPRKSFQNSVQKETCVLELIHIDIYDSNGVIT 424


>gb|KYP59031.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 489

 Score =  207 bits (528), Expect = 1e-61
 Identities = 106/177 (59%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
 Frame = +3

Query: 54  NGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESNKVVI 233
           NGS+A+V+G G+V+L LSS   L LD V H+ +IRKNLIS +LLV+ G+KVVFESN+VVI
Sbjct: 250 NGSLARVIGLGRVELELSSRNCLVLDEVFHVSEIRKNLISVALLVQQGFKVVFESNRVVI 309

Query: 234 SRHGLFIGKGFMLDGLFRLSVM-PXXXXXXXXXXXXIANVECCDTWHGRLGHVNSGTIKR 410
           S+HG F+GKG++ DGLF+L++M              I+NVECCD WHGRLGH+N  +IKR
Sbjct: 310 SQHGFFVGKGYICDGLFKLNIMSSFINKNSSISSSSISNVECCDIWHGRLGHLNLNSIKR 369

Query: 411 MMHLDLIPKSSINVKEKCEICVQAKQPR-KPHKSVDKETMLLGLIHSDICDSNHVLT 578
           MM LDLI KS   +K+KCE+CVQAKQPR     S+ KET +L LIHSDICDSN V+T
Sbjct: 370 MMTLDLIHKSFNKLKQKCEVCVQAKQPRISFENSIQKETCVLELIHSDICDSNGVIT 426


>ref|XP_020112371.1| uncharacterized protein LOC109726957 isoform X1 [Ananas comosus]
          Length = 867

 Score =  184 bits (466), Expect = 2e-50
 Identities = 97/177 (54%), Positives = 121/177 (68%), Gaps = 4/177 (2%)
 Frame = +3

Query: 48   VRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESNKV 227
            V NG    VLG G V+L L+SGK L L  V H P+IR+NLIS SLLV+ GYK+V ESNKV
Sbjct: 615  VGNGKAVNVLGIGTVKLKLTSGKTLILHNVQHSPEIRRNLISGSLLVQLGYKIVLESNKV 674

Query: 228  VISRHGLFIGKGFMLDGLFRLSVM---PXXXXXXXXXXXXIANVECCDTWHGRLGHVNSG 398
            VIS+  +FIGKGF+ +GLF+L+V+                I N E CD WHGRLGHVN  
Sbjct: 675  VISKEEMFIGKGFVSEGLFKLNVLSFADNKNSSSSTSSTVILNTESCDIWHGRLGHVNLR 734

Query: 399  TIKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVD-KETMLLGLIHSDICDSN 566
            +I ++ +L+L+PK  I+   KCEIC QAKQPRK  KSV  ++T +L LIHSD+CDSN
Sbjct: 735  SILKLSNLNLVPKFKIDPMSKCEICTQAKQPRKSFKSVPYRDTQILELIHSDVCDSN 791


>gb|KZV26179.1| hypothetical protein F511_06346 [Dorcoceras hygrometricum]
          Length = 292

 Score =  164 bits (415), Expect = 9e-47
 Identities = 80/179 (44%), Positives = 124/179 (69%)
 Frame = +3

Query: 42  LLVRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESN 221
           L + N + +++ G+G+V L ++SGK L+L+ V ++PDIRKNL+S SLL ++G+++VFES+
Sbjct: 14  LYMGNSATSEIKGQGKVVLKMTSGKELTLNNVLYVPDIRKNLVSGSLLNKHGFRIVFESD 73

Query: 222 KVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTWHGRLGHVNSGT 401
           KVV+S++G+++G+G++ DGLF+L+VM             I  +E    WHGRLGHVN  T
Sbjct: 74  KVVVSKNGMYVGRGYVSDGLFKLNVM-AIKPKMNKINPSIYLLESPYLWHGRLGHVNYDT 132

Query: 402 IKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVDKETMLLGLIHSDICDSNHVLT 578
           I+R+++L  IP   I+   KCE CV+AKQ R   K++++ T  L LIH+D+CD   V T
Sbjct: 133 IRRLINLQNIPTFQIDKSHKCEKCVEAKQTRSSFKTIERNTEPLDLIHTDVCDLKGVQT 191


>gb|KZV36299.1| hypothetical protein F511_22414 [Dorcoceras hygrometricum]
          Length = 569

 Score =  170 bits (431), Expect = 1e-46
 Identities = 85/180 (47%), Positives = 120/180 (66%), Gaps = 1/180 (0%)
 Frame = +3

Query: 42  LLVRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESN 221
           L + N + + V G G+V L ++S K L+L  V H+P+IRKNL+S S LV+ G+++VFESN
Sbjct: 242 LFMGNSASSDVAGIGKVVLKMTSRKELALIDVLHVPEIRKNLVSGSALVKAGFRLVFESN 301

Query: 222 KVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIAN-VECCDTWHGRLGHVNSG 398
           K ++S++G+FIGKG++ D LF+++VMP                VEC + WHGRLGHVN  
Sbjct: 302 KFILSKNGVFIGKGYLEDNLFKMNVMPVLREFDGNKIKASTYIVECYNLWHGRLGHVNYN 361

Query: 399 TIKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVDKETMLLGLIHSDICDSNHVLT 578
           T+KR++ L+L+P   IN   KCE+CV+AK  + P  SV++ T  L LIHSDICD   V T
Sbjct: 362 TLKRLVKLNLLPTMDINKTHKCEVCVEAKMTKLPFHSVERSTTPLELIHSDICDLKFVQT 421


>gb|KZV25402.1| hypothetical protein F511_07286 [Dorcoceras hygrometricum]
          Length = 493

 Score =  167 bits (423), Expect = 5e-46
 Identities = 83/176 (47%), Positives = 118/176 (67%), Gaps = 1/176 (0%)
 Frame = +3

Query: 42  LLVRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESN 221
           L + N + + V G G+V L ++S K L+L  V H+P+IRKNL+S S LV+ G+++VFESN
Sbjct: 304 LFMENSASSDVAGIGKVVLKMTSRKELALIDVLHVPEIRKNLVSGSELVKAGFRLVFESN 363

Query: 222 KVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIAN-VECCDTWHGRLGHVNSG 398
           K ++S++G+FIGKG++ D LF+++VMP                VEC + WHGRLGHVN  
Sbjct: 364 KFILSKNGVFIGKGYLEDNLFKMNVMPVLREFDGNKIKASTYIVECSNLWHGRLGHVNYN 423

Query: 399 TIKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVDKETMLLGLIHSDICDSN 566
           T+KR++ L+L+P   IN   KCE+CV+AK  +    SV++ T  L LIHSDICD N
Sbjct: 424 TLKRLVKLNLLPTIEINKTHKCEVCVEAKMTKLSFHSVERSTTPLELIHSDICDLN 479


>gb|KZV48065.1| hypothetical protein F511_31040 [Dorcoceras hygrometricum]
          Length = 767

 Score =  170 bits (431), Expect = 8e-46
 Identities = 85/180 (47%), Positives = 120/180 (66%), Gaps = 1/180 (0%)
 Frame = +3

Query: 42  LLVRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESN 221
           L + N + + V G G+V L ++S K L+L  V H+P+IRKNL+S S LV+ G+++VFESN
Sbjct: 304 LFMGNSASSDVAGIGKVVLKMTSRKELALIDVLHVPEIRKNLVSGSALVKAGFRLVFESN 363

Query: 222 KVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIAN-VECCDTWHGRLGHVNSG 398
           K ++S++G+FIGKG++ D LF+++VMP                VEC + WHGRLGHVN  
Sbjct: 364 KFILSKNGVFIGKGYLEDNLFKMNVMPVLREFDGNKIKASTYIVECYNLWHGRLGHVNYN 423

Query: 399 TIKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVDKETMLLGLIHSDICDSNHVLT 578
           T+KR++ L+L+P   IN   KCE+CV+AK  + P  SV++ T  L LIHSDICD   V T
Sbjct: 424 TLKRLVKLNLLPTMDINKTHKCEVCVEAKMTKLPFHSVERSTTPLELIHSDICDLKFVQT 483


>gb|KZV26201.1| hypothetical protein F511_28547 [Dorcoceras hygrometricum]
          Length = 979

 Score =  171 bits (432), Expect = 1e-45
 Identities = 85/180 (47%), Positives = 120/180 (66%), Gaps = 1/180 (0%)
 Frame = +3

Query: 42  LLVRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESN 221
           L + N + + V G G+V L ++S K L+L  V H+P+IRKNL+S S LV+ G+++VFESN
Sbjct: 336 LFMGNSASSDVAGIGKVVLKMTSRKELALIDVLHVPEIRKNLVSGSALVKAGFRLVFESN 395

Query: 222 KVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIAN-VECCDTWHGRLGHVNSG 398
           K ++S++G+FIGKG++ D LF+++VMP                VEC + WHGRLGHVN  
Sbjct: 396 KFILSKNGVFIGKGYLEDNLFKMNVMPVLREFDGNKIKASTYIVECSNLWHGRLGHVNYN 455

Query: 399 TIKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVDKETMLLGLIHSDICDSNHVLT 578
           T+KR++ L+L+P   IN   KCE+CV+AK  + P  SV++ T  L LIHSDICD   V T
Sbjct: 456 TLKRLVKLNLLPTMDINKTHKCEVCVEAKMTKLPFHSVERSTTPLELIHSDICDLKFVQT 515


>gb|EEC75533.1| hypothetical protein OsI_12151 [Oryza sativa Indica Group]
          Length = 328

 Score =  160 bits (405), Expect = 7e-45
 Identities = 84/182 (46%), Positives = 117/182 (64%), Gaps = 1/182 (0%)
 Frame = +3

Query: 36  ASLLVRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFE 215
           +SLL+ NGS+A V G G V L L+SGK + L  V H+P I+KNL+S+SLL R G+++VFE
Sbjct: 117 SSLLMGNGSLAAVHGVGTVDLKLTSGKTVQLKNVQHVPSIKKNLVSSSLLCREGFRLVFE 176

Query: 216 SNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTWHGRLGHVNS 395
           SNK V+S++G F+GK +   GLFR S+              I+     + WH RL HVN 
Sbjct: 177 SNKCVVSKYGTFVGKSYDRGGLFRFSL--DDMCNNHNVVNHISENGESNVWHSRLCHVNF 234

Query: 396 GTIKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIHSDICDSNHV 572
           G + R+ ++ LIPK ++    KC  CVQ+KQPRKPHK+ +   +  L L+HSD+C+ N V
Sbjct: 235 GCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRKPHKASEARNLAPLELVHSDLCEMNGV 294

Query: 573 LT 578
           LT
Sbjct: 295 LT 296


>gb|KZV31144.1| hypothetical protein F511_24590 [Dorcoceras hygrometricum]
          Length = 946

 Score =  168 bits (426), Expect = 7e-45
 Identities = 85/180 (47%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
 Frame = +3

Query: 42  LLVRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESN 221
           L + N   + V G G+V L ++S K L+L  V H+P+IRKNL+S S LV+ G+++VFESN
Sbjct: 304 LFMGNSVSSDVAGIGKVVLKMTSRKELALIDVLHVPEIRKNLVSGSALVKAGFRLVFESN 363

Query: 222 KVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIAN-VECCDTWHGRLGHVNSG 398
           K ++S++G+FIGKG++ D LF+++VMP                VEC + WHGRLGHVN  
Sbjct: 364 KFILSKNGVFIGKGYLEDNLFKMNVMPVLREFDGNKIKASTYIVECYNLWHGRLGHVNYN 423

Query: 399 TIKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVDKETMLLGLIHSDICDSNHVLT 578
           T+KR++ L+L+P   IN   KCE+CV+AK  + P  SV + T  L LIHSDICD   V T
Sbjct: 424 TLKRLVKLNLLPTMDINKTHKCEVCVEAKMTKLPFHSVQRSTTPLELIHSDICDLKFVQT 483


>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays]
 gb|ACA21850.1| Fourf gag/pol protein [Zea mays]
          Length = 1279

 Score =  168 bits (426), Expect = 8e-45
 Identities = 85/183 (46%), Positives = 120/183 (65%), Gaps = 1/183 (0%)
 Frame = +3

Query: 33  SASLLVRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVF 212
           S +LL+ NGS A VLG G V L  +SGK + L  V H+P I+KNL+SAS+L R+GYKVV 
Sbjct: 301 SGALLMGNGSRAHVLGVGTVILKFTSGKTVPLKSVQHVPSIKKNLVSASMLCRDGYKVVL 360

Query: 213 ESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTWHGRLGHVN 392
           ESNK V+S+HG F+GKG+   GLFRLS+              +   +  D WH R  H +
Sbjct: 361 ESNKCVVSKHGTFVGKGYECGGLFRLSL----HDVCNKLVNSVNFSDESDLWHSRFCHAS 416

Query: 393 SGTIKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIHSDICDSNH 569
            G + R+ +++LIPK ++  K KC +CV++KQPRKPHK+ +  ++  L L+HSD+C+ N 
Sbjct: 417 FGCLMRLANINLIPKFNLVKKSKCHVCVESKQPRKPHKAAEARSLAPLELVHSDLCEMNG 476

Query: 570 VLT 578
           +LT
Sbjct: 477 ILT 479


>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
          Length = 1292

 Score =  168 bits (425), Expect = 1e-44
 Identities = 85/183 (46%), Positives = 120/183 (65%), Gaps = 1/183 (0%)
 Frame = +3

Query: 33  SASLLVRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVF 212
           S +LL+ NGS A VLG G V L  +SGK + L  V H+P I+KNL+SAS+L R+GYKVV 
Sbjct: 341 SGALLMGNGSRAHVLGVGTVILKFTSGKTVPLKSVQHVPSIKKNLVSASMLCRDGYKVVL 400

Query: 213 ESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTWHGRLGHVN 392
           ESNK V+S+HG F+GKG+   GLFRLS+              +   +  D WH R  H +
Sbjct: 401 ESNKCVVSKHGTFVGKGYDCGGLFRLSL----HDVCNKLVNSVHFSDESDLWHSRFCHAS 456

Query: 393 SGTIKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIHSDICDSNH 569
            G + R+ +++LIPK ++  K KC +CV++KQPRKPHK+ +  ++  L L+HSD+C+ N 
Sbjct: 457 FGCLMRLANINLIPKFNLVKKSKCHVCVESKQPRKPHKAAEARSLAPLELVHSDLCEMNG 516

Query: 570 VLT 578
           +LT
Sbjct: 517 ILT 519


>gb|KZV54798.1| hypothetical protein F511_04420 [Dorcoceras hygrometricum]
          Length = 518

 Score =  162 bits (409), Expect = 8e-44
 Identities = 77/173 (44%), Positives = 121/173 (69%)
 Frame = +3

Query: 42  LLVRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESN 221
           L + N + +++ G+G+V L ++SGK L+L+ V ++ DIRKNL+S SLL ++G+++VFES+
Sbjct: 346 LYMGNSATSEIKGQGKVVLKMTSGKELTLNNVLYVSDIRKNLVSGSLLNKHGFRIVFESD 405

Query: 222 KVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTWHGRLGHVNSGT 401
           KVV+S++G+++G+G++ DGLF+L+VM                +E    WHGRLGHVN  T
Sbjct: 406 KVVVSKNGMYVGRGYVSDGLFKLNVMAIKPKVNKVNPSAYV-LESPYLWHGRLGHVNYDT 464

Query: 402 IKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVDKETMLLGLIHSDICD 560
           I+R+++L  IP   I+   KCEICV+AKQ R   K++++ T  L LIH+D+CD
Sbjct: 465 IRRLINLKNIPTFQIDKSHKCEICVEAKQTRSSFKTIERNTEPLDLIHTDVCD 517


>gb|KZV48684.1| hypothetical protein F511_26132 [Dorcoceras hygrometricum]
          Length = 359

 Score =  157 bits (398), Expect = 2e-43
 Identities = 79/179 (44%), Positives = 120/179 (67%)
 Frame = +3

Query: 42  LLVRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESN 221
           L +RN + +++ G+G+V L ++S K L+L+ V ++ DIRKNLIS SLL ++ +++VFES+
Sbjct: 153 LYMRNSATSEIKGQGKVVLKMTSRKELTLNNVLYVQDIRKNLISGSLLNKHDFRIVFESD 212

Query: 222 KVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTWHGRLGHVNSGT 401
           KVV+S++G+++G+G++ DGLF+L+VM                +E    WHGRLGHVN  T
Sbjct: 213 KVVVSKNGMYVGRGYVSDGLFKLNVMAIKPKVNKVNPSAYL-LESPYLWHGRLGHVNYDT 271

Query: 402 IKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVDKETMLLGLIHSDICDSNHVLT 578
           I R+++L  IP   I    KCEICV+AKQ R   K++++ T  L LIH+D+CD   V T
Sbjct: 272 IHRLINLKNIPTFQIYKSHKCEICVEAKQTRSSFKTIERNTEPLDLIHTDVCDLKGVQT 330


>gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1151

 Score =  164 bits (416), Expect = 2e-43
 Identities = 85/182 (46%), Positives = 117/182 (64%), Gaps = 1/182 (0%)
 Frame = +3

Query: 36  ASLLVRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFE 215
           +++L+ NGS A V G G V L  +SGK++ L  V H+P I +NL+S S L R+G+K+VFE
Sbjct: 197 STVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFE 256

Query: 216 SNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTWHGRLGHVNS 395
           SNKVV+S+HG FIGKG+   GLFR S+              + +    + WH RL H+N 
Sbjct: 257 SNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVWHSRLCHINF 314

Query: 396 GTIKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVDKETM-LLGLIHSDICDSNHV 572
           G + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  + LL L+HSD+C+ N V
Sbjct: 315 GLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLALLELLHSDLCEMNGV 374

Query: 573 LT 578
           LT
Sbjct: 375 LT 376


>gb|ABA93966.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1212

 Score =  164 bits (416), Expect = 2e-43
 Identities = 89/191 (46%), Positives = 119/191 (62%), Gaps = 2/191 (1%)
 Frame = +3

Query: 12  DIRKNLISAS-LLVRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 188
           D R N+   S +L+ NGS A V G G V L  +SGK++ L  V H+P I +NL+S S L 
Sbjct: 303 DTRANVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 362

Query: 189 RNGYKVVFESNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTW 368
           R+G+K+VFESNKVVIS+HG FIGKG+   GLFR S+              + +    + W
Sbjct: 363 RDGFKLVFESNKVVISKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 420

Query: 369 HGRLGHVNSGTIKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 545
           H RL H+N G + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+H
Sbjct: 421 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 480

Query: 546 SDICDSNHVLT 578
           SD+C+ N VLT
Sbjct: 481 SDLCEMNGVLT 491


>emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group]
          Length = 1264

 Score =  164 bits (416), Expect = 2e-43
 Identities = 85/182 (46%), Positives = 116/182 (63%), Gaps = 1/182 (0%)
 Frame = +3

Query: 36  ASLLVRNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFE 215
           +++L+ NGS A V G G V L  +SGK++ L  V H+P I +NL+S S L RNG+K+VFE
Sbjct: 326 STVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRNGFKLVFE 385

Query: 216 SNKVVISRHGLFIGKGFMLDGLFRLSVMPXXXXXXXXXXXXIANVECCDTWHGRLGHVNS 395
           SNKVV+S+HG FIGKG+   GLFR S+              + +    + WH RL H+N 
Sbjct: 386 SNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVWHSRLCHINF 443

Query: 396 GTIKRMMHLDLIPKSSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIHSDICDSNHV 572
           G + R+  + LIPK SI    KC  CVQ+KQPRKPHK+ ++  +  L L+HSD+C+ N V
Sbjct: 444 GLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMNGV 503

Query: 573 LT 578
           LT
Sbjct: 504 LT 505