BLASTX nr result
ID: Rehmannia29_contig00014305
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00014305
(679 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ALT31529.1| mediator of RNA polymerase II transcription subun... 136 5e-33
gb|PIM98867.1| hypothetical protein CDL12_28646 [Handroanthus im... 122 3e-28
ref|XP_020553882.1| mediator of RNA polymerase II transcription ... 112 5e-27
ref|XP_020541256.1| mediator of RNA polymerase II transcription ... 115 6e-26
ref|XP_020541253.1| mediator of RNA polymerase II transcription ... 115 6e-26
gb|PNT11860.1| hypothetical protein POPTR_011G049700v3 [Populus ... 115 1e-25
gb|PNT11861.1| hypothetical protein POPTR_011G049700v3 [Populus ... 115 1e-25
ref|XP_006377328.1| hypothetical protein POPTR_0011s04940g [Popu... 115 1e-25
ref|XP_018820163.1| PREDICTED: mediator of RNA polymerase II tra... 114 1e-25
ref|XP_018820161.1| PREDICTED: mediator of RNA polymerase II tra... 114 1e-25
ref|XP_015574601.1| PREDICTED: mediator of RNA polymerase II tra... 114 2e-25
ref|XP_015574600.1| PREDICTED: mediator of RNA polymerase II tra... 114 2e-25
ref|XP_002519035.1| PREDICTED: mediator of RNA polymerase II tra... 114 2e-25
gb|OMO76475.1| hypothetical protein CCACVL1_15645 [Corchorus cap... 113 4e-25
gb|KDO75891.1| hypothetical protein CISIN_1g0008481mg, partial [... 113 5e-25
ref|XP_006467829.1| PREDICTED: mediator of RNA polymerase II tra... 113 5e-25
gb|ESR62546.1| hypothetical protein CICLE_v10014062mg [Citrus cl... 113 5e-25
ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II tra... 113 5e-25
ref|XP_024046748.1| mediator of RNA polymerase II transcription ... 113 5e-25
gb|EXB82792.1| hypothetical protein L484_012105 [Morus notabilis] 107 6e-25
>gb|ALT31529.1| mediator of RNA polymerase II transcription subunit 16-like protein,
partial [Rehmannia glutinosa]
Length = 1148
Score = 136 bits (342), Expect = 5e-33
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV
Sbjct: 1092 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 1148
>gb|PIM98867.1| hypothetical protein CDL12_28646 [Handroanthus impetiginosus]
Length = 952
Score = 122 bits (306), Expect = 3e-28
Identities = 53/57 (92%), Positives = 53/57 (92%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPGG G PPNQNEKETWWISRWAYGCPMCGGTWVRVV
Sbjct: 898 LEGVWYKCIRCLRQTSAFASPGG--GNPPNQNEKETWWISRWAYGCPMCGGTWVRVV 952
>ref|XP_020553882.1| mediator of RNA polymerase II transcription subunit 16-like
[Sesamum indicum]
Length = 225
Score = 112 bits (281), Expect = 5e-27
Identities = 49/57 (85%), Positives = 50/57 (87%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPG G+ PNQNEKE WWISRWAYGCPMCGG WVRVV
Sbjct: 171 LEGVWYKCIRCLRQTSAFASPG--CGSHPNQNEKEIWWISRWAYGCPMCGGAWVRVV 225
>ref|XP_020541256.1| mediator of RNA polymerase II transcription subunit 16 isoform X2
[Jatropha curcas]
Length = 1069
Score = 115 bits (289), Expect = 6e-26
Identities = 50/57 (87%), Positives = 52/57 (91%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPG A +PPNQNE+E WWISRWAYGCPMCGGTWVRVV
Sbjct: 1015 LEGVWYKCIRCLRQTSAFASPG--ATSPPNQNEREAWWISRWAYGCPMCGGTWVRVV 1069
>ref|XP_020541253.1| mediator of RNA polymerase II transcription subunit 16 isoform X1
[Jatropha curcas]
ref|XP_020541254.1| mediator of RNA polymerase II transcription subunit 16 isoform X1
[Jatropha curcas]
ref|XP_020541255.1| mediator of RNA polymerase II transcription subunit 16 isoform X1
[Jatropha curcas]
gb|KDP20944.1| hypothetical protein JCGZ_21415 [Jatropha curcas]
Length = 1249
Score = 115 bits (289), Expect = 6e-26
Identities = 50/57 (87%), Positives = 52/57 (91%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPG A +PPNQNE+E WWISRWAYGCPMCGGTWVRVV
Sbjct: 1195 LEGVWYKCIRCLRQTSAFASPG--ATSPPNQNEREAWWISRWAYGCPMCGGTWVRVV 1249
>gb|PNT11860.1| hypothetical protein POPTR_011G049700v3 [Populus trichocarpa]
Length = 1248
Score = 115 bits (287), Expect = 1e-25
Identities = 50/57 (87%), Positives = 51/57 (89%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFAS G AA PPNQNE+E WWISRWAYGCPMCGGTWVRVV
Sbjct: 1193 LEGVWYKCIRCLRQTSAFASTGAAAN-PPNQNEREAWWISRWAYGCPMCGGTWVRVV 1248
>gb|PNT11861.1| hypothetical protein POPTR_011G049700v3 [Populus trichocarpa]
Length = 1249
Score = 115 bits (287), Expect = 1e-25
Identities = 50/57 (87%), Positives = 51/57 (89%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFAS G AA PPNQNE+E WWISRWAYGCPMCGGTWVRVV
Sbjct: 1194 LEGVWYKCIRCLRQTSAFASTGAAAN-PPNQNEREAWWISRWAYGCPMCGGTWVRVV 1249
>ref|XP_006377328.1| hypothetical protein POPTR_0011s04940g [Populus trichocarpa]
Length = 1249
Score = 115 bits (287), Expect = 1e-25
Identities = 50/57 (87%), Positives = 51/57 (89%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFAS G AA PPNQNE+E WWISRWAYGCPMCGGTWVRVV
Sbjct: 1194 LEGVWYKCIRCLRQTSAFASTGAAAN-PPNQNEREAWWISRWAYGCPMCGGTWVRVV 1249
>ref|XP_018820163.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X2 [Juglans regia]
Length = 1057
Score = 114 bits (286), Expect = 1e-25
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPG A PPNQN++ETWWISRWAYGCPMCGGTWV+VV
Sbjct: 1003 LEGVWYKCIRCLRQTSAFASPG--ASHPPNQNDRETWWISRWAYGCPMCGGTWVQVV 1057
>ref|XP_018820161.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Juglans regia]
ref|XP_018820162.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Juglans regia]
Length = 1239
Score = 114 bits (286), Expect = 1e-25
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPG A PPNQN++ETWWISRWAYGCPMCGGTWV+VV
Sbjct: 1185 LEGVWYKCIRCLRQTSAFASPG--ASHPPNQNDRETWWISRWAYGCPMCGGTWVQVV 1239
>ref|XP_015574601.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X4 [Ricinus communis]
Length = 1010
Score = 114 bits (285), Expect = 2e-25
Identities = 49/57 (85%), Positives = 51/57 (89%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPG A PPNQN++E WWISRWAYGCPMCGGTWVRVV
Sbjct: 956 LEGVWYKCIRCLRQTSAFASPG--ATNPPNQNDREAWWISRWAYGCPMCGGTWVRVV 1010
>ref|XP_015574600.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X3 [Ricinus communis]
Length = 1058
Score = 114 bits (285), Expect = 2e-25
Identities = 49/57 (85%), Positives = 51/57 (89%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPG A PPNQN++E WWISRWAYGCPMCGGTWVRVV
Sbjct: 1004 LEGVWYKCIRCLRQTSAFASPG--ATNPPNQNDREAWWISRWAYGCPMCGGTWVRVV 1058
>ref|XP_002519035.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Ricinus communis]
gb|EEF43246.1| conserved hypothetical protein [Ricinus communis]
Length = 1255
Score = 114 bits (285), Expect = 2e-25
Identities = 49/57 (85%), Positives = 51/57 (89%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPG A PPNQN++E WWISRWAYGCPMCGGTWVRVV
Sbjct: 1201 LEGVWYKCIRCLRQTSAFASPG--ATNPPNQNDREAWWISRWAYGCPMCGGTWVRVV 1255
>gb|OMO76475.1| hypothetical protein CCACVL1_15645 [Corchorus capsularis]
Length = 1250
Score = 113 bits (283), Expect = 4e-25
Identities = 49/57 (85%), Positives = 50/57 (87%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPG PNQNE+ETWWISRWAYGCPMCGGTWVRVV
Sbjct: 1196 LEGVWYKCIRCLRQTSAFASPGST--NQPNQNERETWWISRWAYGCPMCGGTWVRVV 1250
>gb|KDO75891.1| hypothetical protein CISIN_1g0008481mg, partial [Citrus sinensis]
gb|KDO75892.1| hypothetical protein CISIN_1g0008481mg, partial [Citrus sinensis]
Length = 802
Score = 113 bits (282), Expect = 5e-25
Identities = 48/57 (84%), Positives = 51/57 (89%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPG A PPNQN++E WWISRWA+GCPMCGGTWVRVV
Sbjct: 748 LEGVWYKCIRCLRQTAAFASPG--ATNPPNQNDREAWWISRWAFGCPMCGGTWVRVV 802
>ref|XP_006467829.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X2 [Citrus sinensis]
Length = 1057
Score = 113 bits (282), Expect = 5e-25
Identities = 48/57 (84%), Positives = 51/57 (89%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPG A PPNQN++E WWISRWA+GCPMCGGTWVRVV
Sbjct: 1003 LEGVWYKCIRCLRQTAAFASPG--ATNPPNQNDREAWWISRWAFGCPMCGGTWVRVV 1057
>gb|ESR62546.1| hypothetical protein CICLE_v10014062mg [Citrus clementina]
Length = 1252
Score = 113 bits (282), Expect = 5e-25
Identities = 48/57 (84%), Positives = 51/57 (89%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPG A PPNQN++E WWISRWA+GCPMCGGTWVRVV
Sbjct: 1198 LEGVWYKCIRCLRQTAAFASPG--ATNPPNQNDREAWWISRWAFGCPMCGGTWVRVV 1252
>ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Citrus sinensis]
Length = 1255
Score = 113 bits (282), Expect = 5e-25
Identities = 48/57 (84%), Positives = 51/57 (89%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPG A PPNQN++E WWISRWA+GCPMCGGTWVRVV
Sbjct: 1201 LEGVWYKCIRCLRQTAAFASPG--ATNPPNQNDREAWWISRWAFGCPMCGGTWVRVV 1255
>ref|XP_024046748.1| mediator of RNA polymerase II transcription subunit 16 [Citrus
clementina]
Length = 1274
Score = 113 bits (282), Expect = 5e-25
Identities = 48/57 (84%), Positives = 51/57 (89%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASPG A PPNQN++E WWISRWA+GCPMCGGTWVRVV
Sbjct: 1220 LEGVWYKCIRCLRQTAAFASPG--ATNPPNQNDREAWWISRWAFGCPMCGGTWVRVV 1274
>gb|EXB82792.1| hypothetical protein L484_012105 [Morus notabilis]
Length = 225
Score = 107 bits (267), Expect = 6e-25
Identities = 47/57 (82%), Positives = 48/57 (84%)
Frame = -1
Query: 679 LEGVWYKCIRCLRQTCAFASPGGAAGTPPNQNEKETWWISRWAYGCPMCGGTWVRVV 509
LEGVWYKCIRCLRQT AFASP A P NQNE+E WWISRWAY CPMCGGTWVRVV
Sbjct: 171 LEGVWYKCIRCLRQTSAFASPD--ATNPSNQNEREVWWISRWAYSCPMCGGTWVRVV 225