BLASTX nr result

ID: Rehmannia29_contig00014166 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00014166
         (406 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019153507.1| PREDICTED: uncharacterized protein LOC109149...    55   6e-06
ref|XP_019150165.1| PREDICTED: uncharacterized protein LOC109146...    54   8e-06

>ref|XP_019153507.1| PREDICTED: uncharacterized protein LOC109149981 [Ipomoea nil]
          Length = 439

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = -1

Query: 250 IDNTEFVS-LQYPLSSTSVAFSY*LLQMEDMKKTFGGALVTVFENALGKVPEQFASWLNQ 74
           +++ ++VS L+  L++T       L    DM+K  GGALV + E   GKVPE+FA++LNQ
Sbjct: 349 MNDKDYVSTLEKELAATKAQ----LQVQSDMQKAMGGALVAILERTFGKVPEEFATFLNQ 404

Query: 73  THEVAPTDEGSGHEPSR 23
           T +  P DEGS  + S+
Sbjct: 405 TSQPVP-DEGSKQQSSQ 420


>ref|XP_019150165.1| PREDICTED: uncharacterized protein LOC109146971 [Ipomoea nil]
 ref|XP_019150166.1| PREDICTED: uncharacterized protein LOC109146971 [Ipomoea nil]
 ref|XP_019150167.1| PREDICTED: uncharacterized protein LOC109146971 [Ipomoea nil]
          Length = 368

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = -1

Query: 166 DMKKTFGGALVTVFENALGKVPEQFASWLNQTHEVAPTDEGSGHEPSR 23
           DM+K  GGALV + E   GKVPE+FA++LNQT +  P DEGS  + S+
Sbjct: 303 DMQKAMGGALVAILERTFGKVPEEFATFLNQTSQPVP-DEGSKQQSSQ 349


Top