BLASTX nr result

ID: Rehmannia29_contig00011956 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00011956
         (528 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV56018.1| hypothetical protein F511_12717 [Dorcoceras hygro...    57   5e-14
ref|XP_020247843.1| F-box/LRR-repeat protein 20-like [Asparagus ...    59   5e-07
gb|KYP63307.1| Retrovirus-related Pol polyprotein from transposo...    47   7e-06

>gb|KZV56018.1| hypothetical protein F511_12717 [Dorcoceras hygrometricum]
          Length = 313

 Score = 56.6 bits (135), Expect(2) = 5e-14
 Identities = 24/32 (75%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   DRTKHIDVRFHYIRDVVAKGIVCLEKILSEFN 96
           DRTKHIDVRFH+IRD+V+KG++ LEKI SE+N
Sbjct: 255 DRTKHIDVRFHFIRDIVSKGLIFLEKIPSEYN 286



 Score = 48.5 bits (114), Expect(2) = 5e-14
 Identities = 21/27 (77%), Positives = 22/27 (81%)
 Frame = +3

Query: 96  PVDMGAKCLPSSKFLSCLKILNFDTDD 176
           P DMG KCLP SKF+SCLKIL FDT D
Sbjct: 287 PADMGTKCLPVSKFMSCLKILKFDTCD 313


>ref|XP_020247843.1| F-box/LRR-repeat protein 20-like [Asparagus officinalis]
          Length = 602

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   DRTKHIDVRFHYIRDVVAKGIVCLEKILSEFN 96
           DRTKHIDVRFHYIRD+V KGIV LEKI SEFN
Sbjct: 199 DRTKHIDVRFHYIRDIVEKGIVKLEKIPSEFN 230


>gb|KYP63307.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 322

 Score = 46.6 bits (109), Expect(2) = 7e-06
 Identities = 18/32 (56%), Positives = 27/32 (84%)
 Frame = +1

Query: 1   DRTKHIDVRFHYIRDVVAKGIVCLEKILSEFN 96
           +RTKH+DV+FH++RDVVA  +V +EK+ +E N
Sbjct: 264 ERTKHVDVKFHFVRDVVASDVVKIEKVATEEN 295



 Score = 30.8 bits (68), Expect(2) = 7e-06
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +3

Query: 99  VDMGAKCLPSSKFLSCLKILN 161
           VDM  K LPS+KF  CLK+LN
Sbjct: 297 VDMLTKALPSNKFEFCLKLLN 317


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