BLASTX nr result

ID: Rehmannia29_contig00011871 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00011871
         (591 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011079688.1| transcription initiation factor TFIID subuni...    57   1e-06
ref|XP_022868121.1| transcription initiation factor TFIID subuni...    55   8e-06
ref|XP_022868119.1| transcription initiation factor TFIID subuni...    55   9e-06
ref|XP_022868118.1| transcription initiation factor TFIID subuni...    55   1e-05

>ref|XP_011079688.1| transcription initiation factor TFIID subunit 9-like [Sesamum
           indicum]
 ref|XP_011101759.1| transcription initiation factor TFIID subunit 9-like [Sesamum
           indicum]
 ref|XP_011101766.1| transcription initiation factor TFIID subunit 9-like [Sesamum
           indicum]
 ref|XP_011101769.1| transcription initiation factor TFIID subunit 9-like [Sesamum
           indicum]
 ref|XP_011069458.1| transcription initiation factor TFIID subunit 9-like [Sesamum
           indicum]
 ref|XP_020555059.1| transcription initiation factor TFIID subunit 9-like [Sesamum
           indicum]
 ref|XP_020555061.1| transcription initiation factor TFIID subunit 9-like [Sesamum
           indicum]
          Length = 181

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 27/28 (96%), Positives = 27/28 (96%), Gaps = 1/28 (3%)
 Frame = -3

Query: 589 NP-SQDRRDLPQGTPQRVSFPLGAKHPR 509
           NP SQDRRDLPQGTPQRVSFPLGAKHPR
Sbjct: 154 NPNSQDRRDLPQGTPQRVSFPLGAKHPR 181


>ref|XP_022868121.1| transcription initiation factor TFIID subunit 9-like isoform X4
           [Olea europaea var. sylvestris]
 ref|XP_022868122.1| transcription initiation factor TFIID subunit 9-like isoform X4
           [Olea europaea var. sylvestris]
          Length = 181

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -3

Query: 589 NPSQDRRDLPQGTPQRVSFPLGAKHPR 509
           N SQDRRDLPQGTPQRVSFP+GAK PR
Sbjct: 155 NASQDRRDLPQGTPQRVSFPIGAKRPR 181


>ref|XP_022868119.1| transcription initiation factor TFIID subunit 9-like isoform X3
           [Olea europaea var. sylvestris]
 ref|XP_022868120.1| transcription initiation factor TFIID subunit 9-like isoform X3
           [Olea europaea var. sylvestris]
          Length = 191

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -3

Query: 589 NPSQDRRDLPQGTPQRVSFPLGAKHPR 509
           N SQDRRDLPQGTPQRVSFP+GAK PR
Sbjct: 165 NASQDRRDLPQGTPQRVSFPIGAKRPR 191


>ref|XP_022868118.1| transcription initiation factor TFIID subunit 9-like isoform X2
           [Olea europaea var. sylvestris]
          Length = 198

 Score = 54.7 bits (130), Expect = 1e-05
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -3

Query: 589 NPSQDRRDLPQGTPQRVSFPLGAKHPR 509
           N SQDRRDLPQGTPQRVSFP+GAK PR
Sbjct: 172 NASQDRRDLPQGTPQRVSFPIGAKRPR 198