BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00011466
         (4807 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG11107.1| putative reverse transcriptase domain-containing ...  1737   0.0  
gb|OTG20186.1| putative reverse transcriptase domain-containing ...  1731   0.0  
gb|OTG11106.1| putative reverse transcriptase domain-containing ...  1552   0.0  
gb|OTF92254.1| putative reverse transcriptase domain-containing ...  1524   0.0  
ref|XP_017255857.1| PREDICTED: transposon Ty3-I Gag-Pol polyprot...  1521   0.0  
gb|OTG13256.1| putative reverse transcriptase domain-containing ...  1324   0.0  
ref|XP_013746037.1| uncharacterized protein LOC106448737 [Brassi...  1321   0.0  
ref|XP_013694892.2| uncharacterized protein LOC106398939 [Brassi...  1286   0.0  
gb|PKU87302.1| RNA-directed DNA polymerase [Dendrobium catenatum]    1271   0.0  
gb|PKU63120.1| RNA-directed DNA polymerase [Dendrobium catenatum]    1269   0.0  
gb|PKU85169.1| RNA-directed DNA polymerase [Dendrobium catenatum]    1263   0.0  
gb|PKU71894.1| RNA-directed DNA polymerase [Dendrobium catenatum]    1257   0.0  
gb|PKU69610.1| RNA-directed DNA polymerase [Dendrobium catenatum]    1239   0.0  
gb|PKU86533.1| RNA-directed DNA polymerase [Dendrobium catenatum]    1235   0.0  
gb|PKU88110.1| RNA-directed DNA polymerase [Dendrobium catenatum]    1233   0.0  
ref|XP_021991836.1| uncharacterized protein LOC110888626 [Helian...  1232   0.0  
gb|PKU68398.1| RNA-directed DNA polymerase [Dendrobium catenatum]    1231   0.0  
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                1224   0.0  
gb|PKU64373.1| RNA-directed DNA polymerase [Dendrobium catenatum]    1222   0.0  
gb|PKU62072.1| RNA-directed DNA polymerase [Dendrobium catenatum]    1221   0.0  

>gb|OTG11107.1| putative reverse transcriptase domain-containing protein [Helianthus
            annuus]
          Length = 1465

 Score = 1737 bits (4499), Expect = 0.0
 Identities = 839/1395 (60%), Positives = 1062/1395 (76%), Gaps = 8/1395 (0%)
 Frame = -1

Query: 4198 NPFAQFAHKDDLRGDNGKHD---DSRRWEHSFKIDIPEFHGT-LDADEFLDWMVSVDEIL 4031
            NPF   +  +D +    + +    +RRW+   ++DIPEF G+ L+ + F+DW+ +V+E+ 
Sbjct: 63   NPFGDGSASEDEQEGRPRVERGGGNRRWDSGIRVDIPEFDGSSLNPEGFIDWLATVEEVF 122

Query: 4030 DFKDVPADRRVALVVTRLRGRASAWWQQLKTMRSRQSKPKLTSWDKFKTKLRNEFLPFNY 3851
            ++K+VP ++RVAL+ TRLRGRASAWWQQLK  R+R  K ++ +W K K  LR+ FLP N+
Sbjct: 123  EYKEVPENKRVALIATRLRGRASAWWQQLKLTRNRLGKSRIVTWTKMKKCLRSNFLPHNF 182

Query: 3850 SRTLYQKFQQLRQGSRTIDAYSDEFYQLLVRSDVRETDDQLVSRYIGGLRLQYQDVLNMF 3671
             R +YQ+ Q L+QG++++D Y+ EFYQL+ R+D++E ++QLVSRYIGGLR+Q  + +N+F
Sbjct: 183  QRLMYQRLQNLKQGAKSVDDYTTEFYQLIARNDIQEPEEQLVSRYIGGLRVQIMEAVNLF 242

Query: 3670 SPSSVSEAHQRAVLYEKQLLRRSPFPLPSSGNHFDRS--PTGSQIKPAPTLPSGSRAQGD 3497
             P ++ EAHQRA+ +EKQ  R      P+ GN    S  P G    P+   P GS     
Sbjct: 243  DPLNIPEAHQRALAFEKQNRRVGGSFTPAGGNVGSGSGAPRGG---PSQQKPGGSNT--- 296

Query: 3496 LGFLXXXXXXXXXXXXXXXRCFNCGDPSHLQSACPKRASTRALYVD--DVCDADFSSSPV 3323
                               RCFNCG+  H Q+ C KRA  R L+ +  D    ++ ++PV
Sbjct: 297  -------GPTSKGASSSGPRCFNCGETGHRQAEC-KRAGKRHLFAESEDEQYEEYENNPV 348

Query: 3322 YDDDISAQPPEEFLHGDVGQLLVLQRVCLTPRREDDDSMQRHKLFESTCTVQGKICRFII 3143
            YD++   +  EE + GDVG  LV++R C TP+ + DD + +H +F STCT+ GK+  F+I
Sbjct: 349  YDEETEYE--EEVVTGDVGVNLVVRRSCYTPKADGDDWL-KHNIFHSTCTILGKVFTFVI 405

Query: 3142 DSGSCENVVAADAIQKLNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVW 2963
            DSGSC+N+++ +A+QKL L TE HP PY L WL++  E+TV++R L++ SIG  Y D V 
Sbjct: 406  DSGSCDNLISEEAVQKLALKTESHPKPYKLQWLKKGGEVTVSKRALVSISIGSTYKDDVM 465

Query: 2962 CDVVPMDACHLLLGRPWQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXPTDAHPRVL 2783
            CDVVPMDACHLLLGRPW+Y+R + H+GR NTYSFLF GVK+TL+              +L
Sbjct: 466  CDVVPMDACHLLLGRPWEYERNIEHNGRSNTYSFLFGGVKITLVPSKPKQLAAKQSGTLL 525

Query: 2782 SISYSAFARAMDASSFVLLLVSRDVSESPNVPSVVAPLLSEFADIFPDELPPGLPPLRMI 2603
            +IS   F   ++ +  V +L+ ++V E   +P  + PLL EF+D+FP ELP GLPPLR I
Sbjct: 526  TISQ--FQDELEDTDSVFVLIGKEVLEEVEIPDAMVPLLEEFSDVFPVELPDGLPPLRDI 583

Query: 2602 QHQIDFIPGAKLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPALLIPKKDG 2423
            QH ID  PG++LPNRPHYRMSP+EHEELRRQ+EEL+ +GH+RES+SPCAVPALL PKKDG
Sbjct: 584  QHHIDLEPGSQLPNRPHYRMSPAEHEELRRQVEELISKGHVRESMSPCAVPALLTPKKDG 643

Query: 2422 AWRMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKT 2243
             WRMCVDSRA+NKITVRY FPIPRLDDLLDQL GA++F+KLDLKSGY+QIR+RPGDEWKT
Sbjct: 644  TWRMCVDSRAINKITVRYRFPIPRLDDLLDQLSGASIFTKLDLKSGYYQIRLRPGDEWKT 703

Query: 2242 AFKTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLA 2063
            AFKTREGL+EWLVMPFGLSNAPSTFMR+MNQ LRP IG  VVVYFDDIL+YS S  DH+ 
Sbjct: 704  AFKTREGLYEWLVMPFGLSNAPSTFMRVMNQLLRPFIGKFVVVYFDDILIYSASFSDHVV 763

Query: 2062 HLRAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLT 1883
            H+R VL++LR + FYAA  KCVF+T  VLFLGY +S  GI VD++K+AA+Q+WP PTT+T
Sbjct: 764  HVRQVLALLRRDRFYAATKKCVFMTPKVLFLGYVISGDGIQVDESKVAAVQNWPTPTTIT 823

Query: 1882 EVRSFHGLASFYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKLTHAPLLAL 1703
            EVRSFHGLASFYRRFIPHFS+IMAP+TD M GK+F W  +A  AF  +K KLT AP+L L
Sbjct: 824  EVRSFHGLASFYRRFIPHFSSIMAPVTDCMKGKTFVWTDEAELAFQVVKEKLTTAPILVL 883

Query: 1702 PDFSVPFELHSDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAVVRAIRHW 1523
            P+FS  FELH+DASKVGIG VLSQ G P+AYFSEKL   + RYSTYD+EFYAVV+A++HW
Sbjct: 884  PNFSQVFELHTDASKVGIGGVLSQGGRPVAYFSEKLTGPKLRYSTYDLEFYAVVQAVKHW 943

Query: 1522 RHYLFHREFILYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITNKVADALS 1343
            RHYLFH+EF+L+TDH++L+HI +QD +S +H  W AFL++FTFVVKH++G++N+VADALS
Sbjct: 944  RHYLFHKEFVLFTDHDSLRHIRTQDKVSHKHGRWLAFLEKFTFVVKHKTGVSNRVADALS 1003

Query: 1342 RRHSLLVDMRIEVPGFDSFRELYATDSFFKIILSSLARGDASDFILHDGFLFKGICLCVP 1163
            RR +LLV MR++VPG +  RE  A D +F +IL  +  G  SDF+LHDGFLFKG  LC+P
Sbjct: 1004 RRSNLLVSMRVDVPGLEVIREQLAIDPYFSVILQDVESGQKSDFLLHDGFLFKGNQLCIP 1063

Query: 1162 MCSLRLRLVAELHSTGHVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRICQVSKGTSTNA 983
              SLRL+++ ELH  GHVGRDR++ LV+  Y+WPT+R++V R+V RCR+CQVSKGT+TNA
Sbjct: 1064 DSSLRLKIIKELHGEGHVGRDRTLQLVQASYYWPTMRKEVDRYVKRCRVCQVSKGTATNA 1123

Query: 982  GLYRPLPIPSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPCKRSADAVHVA 803
            GLY PLPIPSQPW  +SMDFVLGLPRTQRG+DSIFVVVDRFSKMVHFIPCK++ DAV+VA
Sbjct: 1124 GLYMPLPIPSQPWVDISMDFVLGLPRTQRGNDSIFVVVDRFSKMVHFIPCKKTTDAVNVA 1183

Query: 802  QLFFREVYRLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSAYHPQTDGQTEVVNR 623
            QLFFR+VYRLHGLP SIVSDRDTRFLSHFWRSLW M NT+L+FSSAYHPQTDGQTEVVNR
Sbjct: 1184 QLFFRDVYRLHGLPSSIVSDRDTRFLSHFWRSLWKMVNTQLNFSSAYHPQTDGQTEVVNR 1243

Query: 622  SLGNLLRCLVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGFLPRAPVDLLTLPS 443
            SLGNLLRCLVGD  +AWD KL QAEFAHN A NRSTG SPFQ+VY   PR P+DL++LP 
Sbjct: 1244 SLGNLLRCLVGDHVKAWDQKLCQAEFAHNHADNRSTGYSPFQIVYSSQPRGPLDLMSLPV 1303

Query: 442  RTREDRRATDFMADLCQVHAATRAKLVDTTAKYKRAADTHRRQLEFSVGDYVWAVLTKDR 263
                 ++  DF+  L +VH A    L     KYK+AAD  RR +EF  GD+VWAVLTKDR
Sbjct: 1304 SGSVPKKVQDFVEGLREVHNAVYDHLTRANLKYKQAADQKRRHVEFEEGDFVWAVLTKDR 1363

Query: 262  YPAHDYHKLSARKIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCHLIPYHGENSFGDET 83
            +   +Y+KLSA+KIGPVEI+EKINPNAYRL+LP+H+R +DVFNV HL+PY+GE+S  DET
Sbjct: 1364 FTVGEYNKLSAKKIGPVEIVEKINPNAYRLKLPSHIRCADVFNVKHLLPYYGESS-DDET 1422

Query: 82   DFDSRANHLQEGKND 38
              +SRAN +  G ND
Sbjct: 1423 AGNSRANFVYPGGND 1437


>gb|OTG20186.1| putative reverse transcriptase domain-containing protein [Helianthus
            annuus]
          Length = 1465

 Score = 1731 bits (4483), Expect = 0.0
 Identities = 835/1395 (59%), Positives = 1058/1395 (75%), Gaps = 8/1395 (0%)
 Frame = -1

Query: 4198 NPFAQFAHKDDLRGDNGKHD---DSRRWEHSFKIDIPEFHGT-LDADEFLDWMVSVDEIL 4031
            NPF   +  +D +    + +    +RRW+   ++DIPEF G+ L+ + F+DW+ +V+E+ 
Sbjct: 63   NPFGDGSASEDEQEGRPRVERGGGNRRWDSGIRVDIPEFDGSSLNPEGFIDWLATVEEVF 122

Query: 4030 DFKDVPADRRVALVVTRLRGRASAWWQQLKTMRSRQSKPKLTSWDKFKTKLRNEFLPFNY 3851
            ++K+VP ++RVAL+ TRLRGRASAWWQQLK  R+R  K ++ +W K K  LR+ FLP N+
Sbjct: 123  EYKEVPENKRVALIATRLRGRASAWWQQLKLTRNRLGKSRIVTWTKMKKCLRSNFLPHNF 182

Query: 3850 SRTLYQKFQQLRQGSRTIDAYSDEFYQLLVRSDVRETDDQLVSRYIGGLRLQYQDVLNMF 3671
             R +YQ+ Q L+QG++++D Y+ EFYQL+ R+D++E ++QLVSRYIGGLR+Q  + +N+F
Sbjct: 183  QRLMYQRLQNLKQGAKSVDDYTTEFYQLIARNDIQEPEEQLVSRYIGGLRVQIMEAVNLF 242

Query: 3670 SPSSVSEAHQRAVLYEKQLLRRSPFPLPSSGNHFDRS--PTGSQIKPAPTLPSGSRAQGD 3497
             P ++ EAHQRA+ +EKQ         P+ GN    S  P G    P+   P GS     
Sbjct: 243  DPLTIPEAHQRALAFEKQNRWVGGSFTPAGGNVGSGSGAPRGG---PSQQKPGGSNT--- 296

Query: 3496 LGFLXXXXXXXXXXXXXXXRCFNCGDPSHLQSACPKRASTRALYVD--DVCDADFSSSPV 3323
                               RCFNCG+  H Q+ C KRA  R L+ +  D    ++ ++PV
Sbjct: 297  -------GPTSKGASSSGPRCFNCGETGHRQAEC-KRAGKRHLFAESEDEQYEEYENNPV 348

Query: 3322 YDDDISAQPPEEFLHGDVGQLLVLQRVCLTPRREDDDSMQRHKLFESTCTVQGKICRFII 3143
            YD++   +  EE + GDVG  LV+ R C TP+ + DD + +H +F STCT+ GK+C F+I
Sbjct: 349  YDEETEYE--EEVVTGDVGVNLVVTRSCYTPKADGDDWL-KHNIFHSTCTILGKVCTFVI 405

Query: 3142 DSGSCENVVAADAIQKLNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVW 2963
            DSGSC+N+++ +A+QKL L TE HP PY L WL++  E+TV++R L++ SIG  Y D V 
Sbjct: 406  DSGSCDNLISEEAVQKLALKTESHPKPYKLQWLKKGGEVTVSKRALVSISIGSTYKDDVV 465

Query: 2962 CDVVPMDACHLLLGRPWQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXPTDAHPRVL 2783
            CDVVPMDACHLLL RPW+Y+R + H+GR NTYSFLF GVK+TL+              +L
Sbjct: 466  CDVVPMDACHLLLDRPWEYERNIEHNGRSNTYSFLFGGVKITLVPSKPKQLAAKQSGTLL 525

Query: 2782 SISYSAFARAMDASSFVLLLVSRDVSESPNVPSVVAPLLSEFADIFPDELPPGLPPLRMI 2603
            +IS   F   ++ +  V +L+ + V E   +P  + PLL EF+D+FP ELP GLPPLR I
Sbjct: 526  TISQ--FQDELEDTDSVFVLIGKAVPEEVEIPDAMVPLLEEFSDVFPVELPDGLPPLRDI 583

Query: 2602 QHQIDFIPGAKLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPALLIPKKDG 2423
            QH ID  PG++LPNRPHYRMSP+EHEELRRQ+EEL+ +GH+RES+SPCAVPALL PKKDG
Sbjct: 584  QHHIDLEPGSQLPNRPHYRMSPAEHEELRRQVEELISKGHVRESMSPCAVPALLTPKKDG 643

Query: 2422 AWRMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKT 2243
             WRMCVDSRA+NKITVRY FPIPRLDDLLDQL GA +F+KLDLKSGY+QIR+RPGDEWKT
Sbjct: 644  TWRMCVDSRAINKITVRYRFPIPRLDDLLDQLSGAIIFTKLDLKSGYYQIRLRPGDEWKT 703

Query: 2242 AFKTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLA 2063
            AFKTREGL+EWLVMPFGLSNAPSTFMR+MNQ LRP IG  VVVYFDDIL+YS S  DH+ 
Sbjct: 704  AFKTREGLYEWLVMPFGLSNAPSTFMRVMNQLLRPFIGKFVVVYFDDILIYSASFSDHVV 763

Query: 2062 HLRAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLT 1883
            H+R VL++LR + FYAA  KCVF+T  VLFLGY +S  GI VD++K+AA+Q+WP PTT+T
Sbjct: 764  HVRQVLALLRRDRFYAATKKCVFMTPKVLFLGYVISGDGIQVDESKVAAVQNWPTPTTIT 823

Query: 1882 EVRSFHGLASFYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKLTHAPLLAL 1703
            EVRSFHGL SFYRRFIPHFS+IMAP+TD M GK+F W  +A  AF  +K KLT AP+L L
Sbjct: 824  EVRSFHGLDSFYRRFIPHFSSIMAPVTDCMKGKTFVWTDEAELAFQVVKEKLTTAPILVL 883

Query: 1702 PDFSVPFELHSDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAVVRAIRHW 1523
            P+FS  FELH+DASKVGIG VLSQ G P+AYFSEKL   + RYSTYD+EFYAVV+A++HW
Sbjct: 884  PNFSQVFELHTDASKVGIGGVLSQGGRPVAYFSEKLTGPKLRYSTYDLEFYAVVQAVKHW 943

Query: 1522 RHYLFHREFILYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITNKVADALS 1343
            RHYLFH+EF+L+TDH++L+HI +QD +S +H  W AFL++FTFVVKH++G++N+VADALS
Sbjct: 944  RHYLFHKEFVLFTDHDSLRHIRTQDKVSHKHGRWLAFLEKFTFVVKHKTGVSNRVADALS 1003

Query: 1342 RRHSLLVDMRIEVPGFDSFRELYATDSFFKIILSSLARGDASDFILHDGFLFKGICLCVP 1163
            RR +LL+ MR++VPG +  RE  A D +F +IL  +  G  SDF+LHDGFLFKG  LC+P
Sbjct: 1004 RRSNLLISMRVDVPGLEVIREQLAIDPYFSVILQDVESGQKSDFLLHDGFLFKGNQLCIP 1063

Query: 1162 MCSLRLRLVAELHSTGHVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRICQVSKGTSTNA 983
              SLRL+++ ELH  GHVGRDR++ LV+  Y+WPT+R++V R+V RCR+CQ+SKGT+TNA
Sbjct: 1064 DSSLRLKIIKELHGEGHVGRDRTLQLVQASYYWPTMRKEVDRYVKRCRVCQISKGTATNA 1123

Query: 982  GLYRPLPIPSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPCKRSADAVHVA 803
            GLY PLPIPSQPW  +SMDFVLGLPRTQRG+DSIFVVVDRFSKMVHFIPCK++ DAV+VA
Sbjct: 1124 GLYMPLPIPSQPWVDISMDFVLGLPRTQRGNDSIFVVVDRFSKMVHFIPCKKTTDAVNVA 1183

Query: 802  QLFFREVYRLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSAYHPQTDGQTEVVNR 623
            QLFFR+VYRLHGLP SIVSDRDTRFLSHFWRSLW M NT+L+FSSAYHPQTDGQTEVVNR
Sbjct: 1184 QLFFRDVYRLHGLPSSIVSDRDTRFLSHFWRSLWKMVNTQLNFSSAYHPQTDGQTEVVNR 1243

Query: 622  SLGNLLRCLVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGFLPRAPVDLLTLPS 443
            SLGNLLRCLVGD  +AWD KL QAEFAHN A+NRSTG SPFQ+VY   PR P+DL++LP 
Sbjct: 1244 SLGNLLRCLVGDHVKAWDQKLCQAEFAHNHAVNRSTGYSPFQIVYSSQPRGPLDLMSLPV 1303

Query: 442  RTREDRRATDFMADLCQVHAATRAKLVDTTAKYKRAADTHRRQLEFSVGDYVWAVLTKDR 263
                 ++  DF+  L +VH A    L     KYK+AAD  RR +EF  GD+VWAVLTKDR
Sbjct: 1304 SGSVPKKVQDFVEGLHEVHNAVYDHLTRANLKYKQAADQKRRHVEFEEGDFVWAVLTKDR 1363

Query: 262  YPAHDYHKLSARKIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCHLIPYHGENSFGDET 83
            +   +Y+KLSA+KIGPVEI+EKINPNAYRL+LP+H+R +DVFNV HL+PY+GE+S  DET
Sbjct: 1364 FTVGEYNKLSAKKIGPVEIVEKINPNAYRLKLPSHIRCADVFNVKHLLPYYGESS-DDET 1422

Query: 82   DFDSRANHLQEGKND 38
              +SRAN +  G ND
Sbjct: 1423 AGNSRANFVYPGGND 1437


>gb|OTG11106.1| putative reverse transcriptase domain-containing protein [Helianthus
            annuus]
          Length = 1230

 Score = 1552 bits (4018), Expect = 0.0
 Identities = 753/1221 (61%), Positives = 934/1221 (76%), Gaps = 4/1221 (0%)
 Frame = -1

Query: 3688 DVLNMFSPSSVSEAHQRAVLYEKQLLRRSPFPLPSSGNHFDRS--PTGSQIKPAPTLPSG 3515
            + +N+F P ++ EAHQRA+ +EKQ  R      P+ GN    S  P G    P+   P G
Sbjct: 2    EAVNLFDPLNIPEAHQRALAFEKQNRRVGGSFTPAGGNVGSGSGAPRGG---PSQQKPGG 58

Query: 3514 SRAQGDLGFLXXXXXXXXXXXXXXXRCFNCGDPSHLQSACPKRASTRALYVD--DVCDAD 3341
            S                        RCFNCG+  H Q+ C KRA  R L+ +  D    +
Sbjct: 59   SNT----------GPTSKGASSSGPRCFNCGETGHRQAEC-KRAGKRHLFAESEDEQYEE 107

Query: 3340 FSSSPVYDDDISAQPPEEFLHGDVGQLLVLQRVCLTPRREDDDSMQRHKLFESTCTVQGK 3161
            + ++PVYD++   +  EE + GDVG  LV++R C TP+ + DD + +H +F STCT+ GK
Sbjct: 108  YENNPVYDEETEYE--EEVVTGDVGVNLVVRRSCYTPKADGDDWL-KHNIFHSTCTILGK 164

Query: 3160 ICRFIIDSGSCENVVAADAIQKLNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGK 2981
            +  F+IDSGSC+N+++ +A+QKL L TE HP PY L WL++  E+TV++R L++ SIG  
Sbjct: 165  VFTFVIDSGSCDNLISEEAVQKLALKTESHPKPYKLQWLKKGGEVTVSKRALVSISIGST 224

Query: 2980 YTDSVWCDVVPMDACHLLLGRPWQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXPTD 2801
            Y D V CDVVPMDACHLLLGRPW+Y+R + H+GR NTYSFLF GVK+TL+          
Sbjct: 225  YKDDVVCDVVPMDACHLLLGRPWEYERNIEHNGRSNTYSFLFGGVKITLVPSKPKQLAAK 284

Query: 2800 AHPRVLSISYSAFARAMDASSFVLLLVSRDVSESPNVPSVVAPLLSEFADIFPDELPPGL 2621
                +L+IS   F   ++ +  V +L+ ++V E   +P  + PLL EF+D+FP ELP GL
Sbjct: 285  QSGTLLTISQ--FQDELEDTDSVFVLIGKEVLEEVEIPDAMVPLLEEFSDVFPVELPDGL 342

Query: 2620 PPLRMIQHQIDFIPGAKLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPALL 2441
            PPLR IQH ID  PG++LPNRPHYRMSP+EHEELRRQ+EEL+ +GH+RES+SPCAVPALL
Sbjct: 343  PPLRDIQHHIDLEPGSQLPNRPHYRMSPAEHEELRRQVEELISKGHVRESMSPCAVPALL 402

Query: 2440 IPKKDGAWRMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRP 2261
             PKKDG WRMCVDSRA+NKITVRY FPIPRLDDLLDQL GA++F+KLDLKSGY+QIR+RP
Sbjct: 403  TPKKDGTWRMCVDSRAINKITVRYRFPIPRLDDLLDQLSGASIFTKLDLKSGYYQIRLRP 462

Query: 2260 GDEWKTAFKTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKS 2081
            GDEWKTAFKTREGL+EWLVMPFGLSNAPSTFMR+MNQ LRP IG  VVVYFDDIL+YS S
Sbjct: 463  GDEWKTAFKTREGLYEWLVMPFGLSNAPSTFMRVMNQLLRPFIGKFVVVYFDDILIYSAS 522

Query: 2080 VHDHLAHLRAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWP 1901
              DH+ H+R VL++LR + FYAA  KCVF+T  VLFLGY +S  GI VD++K+AA+Q+WP
Sbjct: 523  FSDHVVHVRQVLALLRRDRFYAATKKCVFMTPKVLFLGYVISGDGIQVDESKVAAVQNWP 582

Query: 1900 VPTTLTEVRSFHGLASFYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKLTH 1721
             PTT+TE+RSFHGLASFYRRFIPHFS+IMAP+TD M GK F W  +A  AF  +K KLT 
Sbjct: 583  TPTTITELRSFHGLASFYRRFIPHFSSIMAPVTDCMKGKMFVWTDEAELAFQVVKEKLTT 642

Query: 1720 APLLALPDFSVPFELHSDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAVV 1541
            AP+L LP+FS  FELH+DASKVGIG VLSQ G P+AYFSEKL   + RYSTYD+EFYAVV
Sbjct: 643  APILVLPNFSQVFELHTDASKVGIGGVLSQGGRPVAYFSEKLTGPKLRYSTYDLEFYAVV 702

Query: 1540 RAIRHWRHYLFHREFILYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITNK 1361
            +A++HWRHYLFH+EF+L+TDH++L+HI +QD +S +H  W AFL++FTFVVKH++G++N+
Sbjct: 703  QAVKHWRHYLFHKEFVLFTDHDSLRHIRTQDKVSHKHGRWLAFLEKFTFVVKHKTGVSNR 762

Query: 1360 VADALSRRHSLLVDMRIEVPGFDSFRELYATDSFFKIILSSLARGDASDFILHDGFLFKG 1181
            VADALSRR +LLV MR++VPG +  RE  A D +F +IL  +  G  SDF+L+DGFLFKG
Sbjct: 763  VADALSRRSNLLVSMRVDVPGLEVIREQLAIDPYFSVILQDVESGQKSDFLLYDGFLFKG 822

Query: 1180 ICLCVPMCSLRLRLVAELHSTGHVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRICQVSK 1001
              LC+P  SLRL+++ ELH  GHVGRDR++ LV+  Y+WPT+R++V R+V RCR+CQVSK
Sbjct: 823  NQLCIPDSSLRLKIIKELHGEGHVGRDRTLQLVQASYYWPTMRKEVDRYVKRCRVCQVSK 882

Query: 1000 GTSTNAGLYRPLPIPSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPCKRSA 821
            GT+TNAGLY PLPIPSQPW  +SMDFVLGLPRTQRG+DSIFVVVDRFSKMVHFIPCK++ 
Sbjct: 883  GTATNAGLYMPLPIPSQPWVDISMDFVLGLPRTQRGNDSIFVVVDRFSKMVHFIPCKKTT 942

Query: 820  DAVHVAQLFFREVYRLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSAYHPQTDGQ 641
            DAV+VAQLFFR+VYRLHGLP SIVSDRDTRFLSHFWRSLW M NT+L+FSSAYHPQT+GQ
Sbjct: 943  DAVNVAQLFFRDVYRLHGLPSSIVSDRDTRFLSHFWRSLWKMVNTQLNFSSAYHPQTNGQ 1002

Query: 640  TEVVNRSLGNLLRCLVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGFLPRAPVD 461
            TEVVNRSLGNLLRCLVGD  +AWD KL QAEFAHN A NRSTG SPFQ+VY   PR P+D
Sbjct: 1003 TEVVNRSLGNLLRCLVGDHVKAWDQKLCQAEFAHNHADNRSTGYSPFQIVYSSQPRGPLD 1062

Query: 460  LLTLPSRTREDRRATDFMADLCQVHAATRAKLVDTTAKYKRAADTHRRQLEFSVGDYVWA 281
            L++LP      ++  DF+  LC+VH A    L     KYK+AAD  RR +EF  GD+VWA
Sbjct: 1063 LMSLPVSGSVPKKVQDFVEGLCEVHNAVYDHLTRANLKYKQAADQKRRHVEFEEGDFVWA 1122

Query: 280  VLTKDRYPAHDYHKLSARKIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCHLIPYHGEN 101
            VLTKDR+   +Y+KLSA+KIGPVEI+EK NPNAYRL+LP+H+R +DVFNV HL+PY+GE+
Sbjct: 1123 VLTKDRFTVGEYNKLSAKKIGPVEIVEKTNPNAYRLKLPSHIRCADVFNVKHLLPYYGES 1182

Query: 100  SFGDETDFDSRANHLQEGKND 38
            S  DET  + RAN +  G ND
Sbjct: 1183 S-DDETAGNMRANFVYPGGND 1202


>gb|OTF92254.1| putative reverse transcriptase domain-containing protein [Helianthus
            annuus]
          Length = 1281

 Score = 1524 bits (3945), Expect = 0.0
 Identities = 734/1279 (57%), Positives = 945/1279 (73%), Gaps = 6/1279 (0%)
 Frame = -1

Query: 4198 NPFAQFAHKDDLRGDNGKHD---DSRRWEHSFKIDIPEFHGT-LDADEFLDWMVSVDEIL 4031
            NPF   +  +D +    + +    +RRW+   ++DIPEF G+ L+ + F+ W+ +V+E+ 
Sbjct: 40   NPFGDGSSSEDEQEGRPRGECEGGNRRWDSGIRVDIPEFDGSSLNPEGFIGWLATVEEVF 99

Query: 4030 DFKDVPADRRVALVVTRLRGRASAWWQQLKTMRSRQSKPKLTSWDKFKTKLRNEFLPFNY 3851
            ++K+VP ++RVAL+ TRLRGRASAWWQQLK  R+R  K ++ +W K K  LR+ FLP N+
Sbjct: 100  EYKEVPENKRVALIATRLRGRASAWWQQLKLTRNRLGKSRIVTWSKMKKCLRSNFLPHNF 159

Query: 3850 SRTLYQKFQQLRQGSRTIDAYSDEFYQLLVRSDVRETDDQLVSRYIGGLRLQYQDVLNMF 3671
             R +YQ+ Q L+QG++++D Y+ EFYQL+ R+D++E D+QLVSRYIGGLR+Q  + +N+F
Sbjct: 160  QRLIYQRLQNLKQGAKSVDDYTTEFYQLIARNDIQEPDEQLVSRYIGGLRVQIMEAVNLF 219

Query: 3670 SPSSVSEAHQRAVLYEKQLLRRSPFPLPSSGNHFDRSPTGSQIKPAPTLPSGSRAQGDLG 3491
             P ++ EAHQRA+ +EKQ  R         G  F  +P G  +      P G  +QG  G
Sbjct: 220  DPLTIPEAHQRALAFEKQNRR--------VGGSF--TPAGGNVGSGSGTPRGGPSQGKPG 269

Query: 3490 FLXXXXXXXXXXXXXXXRCFNCGDPSHLQSACPKRASTRALYVDDVCDA--DFSSSPVYD 3317
                             RCF+CG+  H Q+ C K+A  R L+ +   D   ++ ++PVYD
Sbjct: 270  G-SNTRPTSKGASSSGPRCFSCGETGHRQAEC-KKAGKRHLFAESEDDQYEEYENNPVYD 327

Query: 3316 DDISAQPPEEFLHGDVGQLLVLQRVCLTPRREDDDSMQRHKLFESTCTVQGKICRFIIDS 3137
            ++   +  EE + GDVG  LV++R C TP+ + DD + +H +F STCT+ GK+C F+IDS
Sbjct: 328  EETEYK--EEVVTGDVGVNLVVRRSCYTPKADGDDWL-KHNIFHSTCTILGKVCMFVIDS 384

Query: 3136 GSCENVVAADAIQKLNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVWCD 2957
            G+C+N+++ +A+QKL L TE HP PY L WL++  E+TV++R L++ SIG  Y D V CD
Sbjct: 385  GNCDNLISEEAVQKLALKTESHPKPYKLQWLKKGGEVTVSKRALVSISIGSTYRDDVVCD 444

Query: 2956 VVPMDACHLLLGRPWQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXPTDAHPRVLSI 2777
            VVPMDACHLLLG PW+Y+R + H+G+ NTYSFLF G+K+TL+              +L+I
Sbjct: 445  VVPMDACHLLLGIPWEYERNIEHNGQSNTYSFLFGGMKITLVPSKPKQLAAKQSGTLLTI 504

Query: 2776 SYSAFARAMDASSFVLLLVSRDVSESPNVPSVVAPLLSEFADIFPDELPPGLPPLRMIQH 2597
            S   F   ++ +  V +L+ + V E   +P  +APLL EF+D+FP ELP GLPPLR IQH
Sbjct: 505  SQ--FQEELEDTDSVFVLIGKAVPEEVEIPDAMAPLLEEFSDVFPVELPDGLPPLRDIQH 562

Query: 2596 QIDFIPGAKLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPALLIPKKDGAW 2417
             ID  PG++LPNRPHY+MSP+EHEELRRQ+EEL+ +GH+RES+SP AVPALL PKKDG W
Sbjct: 563  HIDLEPGSQLPNRPHYKMSPAEHEELRRQVEELISKGHVRESMSPFAVPALLTPKKDGTW 622

Query: 2416 RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 2237
            RMCVDSRA+NKIT+RY FPIPRLDDLLDQ+ GA++F+KLDLKSGY+QIR+RPGDEWKTAF
Sbjct: 623  RMCVDSRAINKITMRYRFPIPRLDDLLDQISGASIFTKLDLKSGYYQIRLRPGDEWKTAF 682

Query: 2236 KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 2057
            KTREGL+EWLVMPFGLSNAPSTFMR+MNQ LRP IG  VVVYFDDIL+YS S  DH+ H+
Sbjct: 683  KTREGLYEWLVMPFGLSNAPSTFMRVMNQLLRPFIGKFVVVYFDDILIYSASFSDHVVHV 742

Query: 2056 RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 1877
            R VL+++R + FYAA  KCVF+T  VLFLGY +S  GI VD++K+AA+Q+WP PTT+TEV
Sbjct: 743  RQVLALVRRDRFYAATKKCVFMTPKVLFLGYVISGDGIQVDESKVAAVQNWPTPTTITEV 802

Query: 1876 RSFHGLASFYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKLTHAPLLALPD 1697
            RSFHGLASFYRRFIPHFS+IMAP+TD M GK+F W  +A  AF  +K KLT AP+L    
Sbjct: 803  RSFHGLASFYRRFIPHFSSIMAPVTDCMKGKTFVWTDEAELAFQVVKEKLTTAPILG--- 859

Query: 1696 FSVPFELHSDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAVVRAIRHWRH 1517
                                   G P+AYFSEKL   + RYSTYD+EFYAVV+AI+HWRH
Sbjct: 860  -----------------------GRPVAYFSEKLTGPKLRYSTYDLEFYAVVQAIKHWRH 896

Query: 1516 YLFHREFILYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITNKVADALSRR 1337
            YLF +EF+L+TDH++L+HI +QD +S +H  W AFL++FTFVVKH++G++NKVADALSRR
Sbjct: 897  YLFQKEFVLFTDHDSLRHIRTQDKVSHKHGRWLAFLEKFTFVVKHKTGVSNKVADALSRR 956

Query: 1336 HSLLVDMRIEVPGFDSFRELYATDSFFKIILSSLARGDASDFILHDGFLFKGICLCVPMC 1157
             +LLV MR++VPG +  RE  A D +F +IL  +  G  SDF+LHDGFL KG  LC+P  
Sbjct: 957  SNLLVSMRVDVPGLEVIREQLAIDPYFSVILQDVETGQKSDFLLHDGFLLKGNQLCIPDS 1016

Query: 1156 SLRLRLVAELHSTGHVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRICQVSKGTSTNAGL 977
             LRL+++ ELH  GHVGRDR++ LV+  Y+WPT+R++V R+V RCR+CQVSKGT+TNAGL
Sbjct: 1017 RLRLKIIKELHGEGHVGRDRTLQLVQASYYWPTMRKEVDRYVKRCRVCQVSKGTATNAGL 1076

Query: 976  YRPLPIPSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPCKRSADAVHVAQL 797
            Y PLPIPSQPW  +SMDFVLGLPRTQRG+DSIFVVVDRFSKMVHFIPCK++ DAV+VAQL
Sbjct: 1077 YMPLPIPSQPWVDISMDFVLGLPRTQRGNDSIFVVVDRFSKMVHFIPCKKTTDAVNVAQL 1136

Query: 796  FFREVYRLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSAYHPQTDGQTEVVNRSL 617
            FFR+VYRLHGLP SIVSDRDTRFL HFWRSLW M NT+L+FSSAYHPQTDGQTEVV RSL
Sbjct: 1137 FFRDVYRLHGLPSSIVSDRDTRFLCHFWRSLWKMVNTQLNFSSAYHPQTDGQTEVVYRSL 1196

Query: 616  GNLLRCLVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGFLPRAPVDLLTLPSRT 437
            GNLLRCLVGD  +AWD KL QAEF HN A+NRST  SPFQ+VY   PR P+DL++LP   
Sbjct: 1197 GNLLRCLVGDHVKAWDQKLCQAEFTHNHAVNRSTRYSPFQIVYSSQPRGPLDLMSLPVSG 1256

Query: 436  REDRRATDFMADLCQVHAA 380
               ++  DF+  L +VH A
Sbjct: 1257 SVPKKVQDFLEGLHEVHNA 1275


>ref|XP_017255857.1| PREDICTED: transposon Ty3-I Gag-Pol polyprotein isoform X1 [Daucus
            carota subsp. sativus]
          Length = 1415

 Score = 1521 bits (3939), Expect = 0.0
 Identities = 727/1357 (53%), Positives = 967/1357 (71%), Gaps = 10/1357 (0%)
 Frame = -1

Query: 4138 DSRRWEHSFKIDIPEFHGTLDADEFLDWMVSVDEILDFKDVPADRRVALVVTRLRGRASA 3959
            ++RRW+  FKI+IPEF G++ A+EF+DW+ +V+ I +FK+VP + +V LV  +L+GRASA
Sbjct: 73   ENRRWDGHFKIEIPEFSGSIQAEEFVDWLNTVERIFEFKEVPENMKVKLVAIKLKGRASA 132

Query: 3958 WWQQLKTMRSRQSKPKLTSWDKFKTKLRNEFLPFNYSRTLYQKFQQLRQGSRTIDAYSDE 3779
            WW+QLK  R R+ K K+  W+K K KL+  FLP NY + ++Q+ Q LRQGSR++D Y++E
Sbjct: 133  WWEQLKLKRERRGKSKIVDWEKMKKKLKENFLPHNYVQAMFQRLQNLRQGSRSVDDYTEE 192

Query: 3778 FYQLLVRSDVRETDDQLVSRYIGGLRLQYQDVLNMFSPSSVSEAHQRAVLYEKQLLR--- 3608
            FYQL+ R+D+ E+++QLV+RY+GGLRL  Q+ L++    SVSE +Q A+  EK+  +   
Sbjct: 193  FYQLISRNDLSESEEQLVARYLGGLRLNVQEALDLHKFWSVSEVYQAALAVEKRQNKPRF 252

Query: 3607 ---RSPFPLPSSGNHFDRSPTGSQIKPAPTLPSGSRAQGDLGFLXXXXXXXXXXXXXXXR 3437
               +S     +     D    GSQ     T+P  + ++                     +
Sbjct: 253  WNSQSQDMTANQRFSIDNQAKGSQ---NTTMPRKNMSESTT--------PQNKSKGTGLK 301

Query: 3436 CFNCGDPSHLQSACPKRASTRALYVDDVCD--ADFSSSPVYDDDISAQPPEEFLHGDVGQ 3263
            CF C +P H  +AC +    + +   +     A++   P+YD     +P E+ L+GDVG+
Sbjct: 302  CFKCNEPGHTSAACRRERGKQLMIGGEEHSQRAEYEEEPIYD----TEPEEDVLYGDVGE 357

Query: 3262 LLVLQRVCLTPRREDDDSMQRHKLFESTCTVQGKICRFIIDSGSCENVVAADAIQKLNLS 3083
             LV+++  L P+ E  +   R+ +F +TCT++GK+C+ IIDSGSCENV++ +A+ KL L 
Sbjct: 358  SLVIRKALLLPKEEPKEDWLRNNIFHTTCTIEGKVCKLIIDSGSCENVISREAVDKLKLK 417

Query: 3082 TEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVWCDVVPMDACHLLLGRPWQYD 2903
             E HP PY L+W ++ NE++V  R L++FSIG KY D+VWCDVV MDACH+LLGRPWQYD
Sbjct: 418  QEKHPKPYKLSWFKKGNEVSVDTRCLVSFSIGRKYFDNVWCDVVKMDACHILLGRPWQYD 477

Query: 2902 RGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXPTDAHPRVLS-ISYSAFARAMDASSFVLL 2726
            R  IH+G++NTY+F    +KVTL                 + +S + F    + +   + 
Sbjct: 478  RNAIHEGKKNTYTFWKDNIKVTLAPMKDKVSAEGKKENGDNMLSITNFMEKAEETGIFMA 537

Query: 2725 LVSRDVSESPNVPSVVAPLLSEFADIFPDELPPGLPPLRMIQHQIDFIPGAKLPNRPHYR 2546
            LV R+V     VP  + PLL E+ D+ P+ELPPGLPP+R IQHQID IPG+ LPN+P YR
Sbjct: 538  LVMREVQPPTQVPDFIKPLLEEYKDLTPEELPPGLPPMRDIQHQIDLIPGSSLPNKPAYR 597

Query: 2545 MSPSEHEELRRQIEELLHRGHIRESLSPCAVPALLIPKKDGAWRMCVDSRALNKITVRYS 2366
            MSP EH+ELRRQ+EE + +G IRESLSPCAVPALL PKKDG WRMCVDSRA+NKITV+Y 
Sbjct: 598  MSPKEHDELRRQVEEAIAKGLIRESLSPCAVPALLTPKKDGTWRMCVDSRAINKITVKYR 657

Query: 2365 FPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAFKTREGLFEWLVMPFGLS 2186
            +PIPR +DLLDQL GA +FSK+DL+SGYHQIRIRPGDEWKTAFKTR+GL+EWLVMPFGLS
Sbjct: 658  YPIPRFEDLLDQLAGAKIFSKIDLRSGYHQIRIRPGDEWKTAFKTRDGLYEWLVMPFGLS 717

Query: 2185 NAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHLRAVLSILRTECFYAAPS 2006
            NAPSTFMR+MN  L+P +  CVVVYFDDIL+YS ++  H   L+ V   LR E  Y    
Sbjct: 718  NAPSTFMRVMNHVLKPFLRRCVVVYFDDILIYSPTLEAHKQDLKEVFESLRQEKLYINLK 777

Query: 2005 KCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEVRSFHGLASFYRRFIPHF 1826
            KC F   NVLFLGY +S  G+ VD  K+ AI DWP P T+ EVRSFHGLASFYRRFI +F
Sbjct: 778  KCNFAVHNVLFLGYIISDQGVKVDQTKVQAILDWPTPRTIHEVRSFHGLASFYRRFIRNF 837

Query: 1825 STIMAPITDLMHG-KSFSWPTQAATAFTDIKHKLTHAPLLALPDFSVPFELHSDASKVGI 1649
            S+++APITD +   K+ SW  +A  +F  IK K++ AP+LALPDF   FE+  DASKVGI
Sbjct: 838  SSLVAPITDCIKSVKTLSWTQEAEESFQLIKRKISAAPVLALPDFDKVFEVDCDASKVGI 897

Query: 1648 GAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAVVRAIRHWRHYLFHREFILYTDHEAL 1469
            GAVLSQ G PIA++SEKL  +R  YSTYD EFYA+++A++HW HYL  REFIL +DHEAL
Sbjct: 898  GAVLSQEGRPIAFYSEKLTGSRCHYSTYDAEFYAIIQALKHWEHYLVQREFILNSDHEAL 957

Query: 1468 KHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITNKVADALSRRHSLLVDMRIEVPGFDS 1289
            K INSQ  LS RHA W +FLQ+FTF ++H++GI NKVADALSR+ S L +MR+EV GFD+
Sbjct: 958  KFINSQQHLSQRHAKWVSFLQRFTFTIRHKAGIQNKVADALSRKASFLTEMRVEVEGFDT 1017

Query: 1288 FRELYATDSFFKIILSSLARGDASDFILHDGFLFKGICLCVPMCSLRLRLVAELHSTGHV 1109
            F++LYA D FF  I  ++ +G+ S++ L +GFLFKG+ LC+P CSLR ++V E H+ GH 
Sbjct: 1018 FKDLYADDKFFGPIFQAILQGEHSEYQLQEGFLFKGLQLCIPECSLREKIVMEKHALGHF 1077

Query: 1108 GRDRSIDLVRRQYFWPTLRRDVSRFVARCRICQVSKGTSTNAGLYRPLPIPSQPWGALSM 929
            GRD+++ L+  +YFWP L+RDV+R V RC  CQ SKG STNAGLY PLPIPS PW  +SM
Sbjct: 1078 GRDKTVALIENKYFWPKLKRDVTRHVERCHTCQRSKGGSTNAGLYTPLPIPSFPWNDVSM 1137

Query: 928  DFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPCKRSADAVHVAQLFFREVYRLHGLPVSIV 749
            DFV+GLPRTQ+  DS+ VVVDR+SKM HF+PC+++ DA HVA+L+F+E++RLHG+P SI 
Sbjct: 1138 DFVVGLPRTQKRTDSVMVVVDRYSKMAHFVPCRKAMDASHVAELYFKEIFRLHGVPRSIT 1197

Query: 748  SDRDTRFLSHFWRSLWSMANTELHFSSAYHPQTDGQTEVVNRSLGNLLRCLVGDTPRAWD 569
            SDRDT+F+ HFWR+LW    TEL FS+AYHP+TDGQTEVVNRSLGNLLRC  GD P+ WD
Sbjct: 1198 SDRDTKFMGHFWRTLWKKIGTELRFSTAYHPETDGQTEVVNRSLGNLLRCFAGDKPKQWD 1257

Query: 568  IKLSQAEFAHNLALNRSTGLSPFQVVYGFLPRAPVDLLTLPSRTREDRRATDFMADLCQV 389
            + L  AEFA+N + NR+T LSPF+VV G  P   +DL  +P+  +   +A + +  + ++
Sbjct: 1258 LVLPFAEFAYNNSKNRTTQLSPFEVVGGLSPNTVLDLAPIPNPKKASAKAEEMVERIKEI 1317

Query: 388  HAATRAKLVDTTAKYKRAADTHRRQLEFSVGDYVWAVLTKDRYPAHDYHKLSARKIGPVE 209
            H   R  +  +  KYK AAD HRR++ F  GD VWAVLTKDR+   + HKL  RK+GP +
Sbjct: 1318 HEQVRDHIEASNLKYKAAADIHRRKVIFKEGDNVWAVLTKDRFLPGENHKLHDRKVGPCK 1377

Query: 208  ILEKINPNAYRLRLPNHLRTSDVFNVCHLIPYHGENS 98
            IL+++N NAY+L+LP+H+++SDVFNV HL+PY G+ S
Sbjct: 1378 ILKRVNDNAYQLKLPSHIKSSDVFNVKHLLPYKGDVS 1414


>gb|OTG13256.1| putative reverse transcriptase domain-containing protein [Helianthus
            annuus]
          Length = 1444

 Score = 1324 bits (3426), Expect = 0.0
 Identities = 664/1395 (47%), Positives = 904/1395 (64%), Gaps = 8/1395 (0%)
 Frame = -1

Query: 4198 NPFAQFAHKDDLRGDNGKHDDSRRWEHSFKIDIPEFHGTLDADEFLDWMVSVDEILDFKD 4019
            NPF +       RG    + D  R     K++IPEF G    DEF+DW+ +V+ + D KD
Sbjct: 69   NPFGR-------RGKRSHNADPLR-HMGIKVEIPEFDGRAQPDEFIDWLSTVERVFDLKD 120

Query: 4018 VPADRRVALVVTRLRGRASAWWQQLKTMRSRQSKPKLTSWDKFKTKLRNEFLPFNYSRTL 3839
            +    +V LV  +LR  AS WW  +K  R++  K K+ +WDK K  L  +FLP NY +  
Sbjct: 121  ISDKFKVKLVAIKLRKYASLWWDHVKKKRAQDRKSKVETWDKMKKLLCEKFLPVNYRQDA 180

Query: 3838 YQKFQQLRQGSRTIDAYSDEFYQLLVRSDVRETDDQLVSRYIGGLRLQYQDVLNMFSPSS 3659
            + ++  L Q + T++    +F +L +R  V E ++QL++R++G LR +  D++ +    +
Sbjct: 181  FLEYHDLSQRTSTVEDLIADFDRLRMRCGVEEQEEQLIARFLGALRPEIADIVQLQPYWT 240

Query: 3658 VSEAHQRAVLYEKQLLRRSPFPLPSSGNHFDRSPTGSQIKPAPTLPS-GSRAQGDLGFLX 3482
             ++  + ++  EKQL  ++   +PS       SPT ++     T  S G++         
Sbjct: 241  FNDVCRLSLKVEKQLKAKNK-SMPSK-----LSPTKAEASRIQTNSSPGTKLSPIKADFS 294

Query: 3481 XXXXXXXXXXXXXXRCFNCGDPSHLQSACPKRASTRALYVDDVCDADFSSSPVYDDDISA 3302
                          RCF C    H    CP +      + +D       S P YD D   
Sbjct: 295  GGPTSSSPTPSKMSRCFKCHGLGHFARECPNKHLVT--FTED-------SFPTYDTDNEE 345

Query: 3301 QPPE--EFLHGDVGQLLVLQRVCLTPRRE--DDDSMQRHKLFESTCTVQGKICRFIIDSG 3134
            +  E  E ++ D G+ L+ QRV  T      DD    R+ +F + CT +GK+C  IID G
Sbjct: 346  KREEGDEIVYPDKGESLITQRVLSTTTTPLGDDTLWLRNNIFRTKCTSKGKVCTVIIDGG 405

Query: 3133 SCENVVAADAIQKLNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVWCDV 2954
            SCEN+VA   + KL L  EPHP PY L WL++ N + VT R L+ FSIG +Y+D VWC+V
Sbjct: 406  SCENMVATSMVDKLGLKLEPHPDPYQLTWLKKGNVVKVTHRCLVQFSIGTRYSDEVWCEV 465

Query: 2953 VPMDACHLLLGRPWQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXPTDAHPRVLSIS 2774
            +PMDACH+LLGRPWQYDR   HDG +NTYSF   GV +TL         T+A     S +
Sbjct: 466  IPMDACHVLLGRPWQYDRQTTHDGFKNTYSFRKDGVNITLAPLDVRETTTEAFILTKS-A 524

Query: 2773 YSAFARAMDASSFVLLLVSRDVSESPNVPSVVAPLLSEFADIFPDELPPGLPPLRMIQHQ 2594
            +  F +         L++    + + +VP  V PLL EF ++FPDE+P GLP +R +QH 
Sbjct: 525  FLDFTKHTKPPLLYTLMIVEQNNPTGDVPGEVQPLLDEFKEVFPDEIPAGLPLIRDVQHC 584

Query: 2593 IDFIPGAKLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPALLIPKKDGAWR 2414
            IDF+PGA +PNRP YRM+P E EEL RQ+ ELL +G IRES+SPCAVPALL+PK  GA+R
Sbjct: 585  IDFVPGAVIPNRPAYRMNPKEFEELHRQVTELLDKGLIRESMSPCAVPALLVPKPGGAYR 644

Query: 2413 MCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAFK 2234
            MC+DSRA+NKIT++Y FPIPR +DLLD L G++VFSK+DL+SGYHQIR+RPGDEWKTAFK
Sbjct: 645  MCIDSRAVNKITIKYRFPIPRFEDLLDHLYGSSVFSKIDLRSGYHQIRMRPGDEWKTAFK 704

Query: 2233 TREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHLR 2054
            TR+GL+EW+VMPFGLSNAPSTFMR+MN   + LIG CVVVYFDDILV+S+ +  HL HLR
Sbjct: 705  TRDGLYEWMVMPFGLSNAPSTFMRLMNHVFKALIGHCVVVYFDDILVFSQDIRQHLLHLR 764

Query: 2053 AVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEVR 1874
             V +ILR +  YA  +KC FL+  VLFLGY +S  GI +D++K+ AI  WP PT++ EVR
Sbjct: 765  QVFTILRDQKLYANRAKCHFLSPEVLFLGYLISENGIRMDESKVEAITAWPTPTSIHEVR 824

Query: 1873 SFHGLASFYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKLTHAPLLALPDF 1694
            SFHGLASFYRRFI +FS+I+APIT+ + G +F+W   A  AF ++K ++T AP+LALP+F
Sbjct: 825  SFHGLASFYRRFIKNFSSIVAPITNCLKGNNFAWTPAATIAFEELKKRVTQAPVLALPNF 884

Query: 1693 SVPFELHSDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAVVRAIRHWRHY 1514
             +PF++  DAS  GIG VLSQ   PIA+FSEKL+  + +YSTYD EFYA++R++ +WRHY
Sbjct: 885  QLPFQVECDASGFGIGGVLSQANRPIAFFSEKLSEAKQKYSTYDKEFYAIIRSLEYWRHY 944

Query: 1513 LFHREFILYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITNKVADALSRRH 1334
            L   EF+LY+DH+AL+ IN Q  L+ RHA W  +LQ+F+FV++H++G +N VADALSRR 
Sbjct: 945  LLPGEFVLYSDHQALRFINGQHKLNPRHAKWVEYLQEFSFVIRHKAGTSNTVADALSRRR 1004

Query: 1333 SLLVDMRIEVPGFDSFRELYATDSFFKIILSSLARGDASDFILHDGFLFKGICLCVPMCS 1154
            +LL  ++++V GFD FR LY  D  F     S        + + DGFLF+   LCVP CS
Sbjct: 1005 ALLTSLQLQVEGFDIFRGLYVDDPDFSEAWKSCQTAPTKGYSVQDGFLFRSNQLCVPKCS 1064

Query: 1153 LRLRLVAELHS---TGHVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRICQVSKGTSTNA 983
            LR  ++ E H     GH GR +++  V+ +++WP +  DV+R + RCR C V+K   +NA
Sbjct: 1065 LRDAIILESHQGGLAGHFGRGKTLKFVQERFYWPKMSTDVARVIDRCRTCHVAKTQHSNA 1124

Query: 982  GLYRPLPIPSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPCKRSADAVHVA 803
            GLY PLP+P+ PW  +S+DFV+GLPRTQR  DSI VVVDRFSKM HF+PC ++ DA  VA
Sbjct: 1125 GLYTPLPVPNGPWEDVSLDFVVGLPRTQRQKDSIMVVVDRFSKMSHFVPCSKTYDASQVA 1184

Query: 802  QLFFREVYRLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSAYHPQTDGQTEVVNR 623
            +L+F E+ +LHG+P S+ SDRD +F+ HFWR+LW    + LHFSSA+HPQ+DGQTEV NR
Sbjct: 1185 RLYFAEIVKLHGVPKSLTSDRDVKFVGHFWRTLWKRLGSRLHFSSAHHPQSDGQTEVTNR 1244

Query: 622  SLGNLLRCLVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGFLPRAPVDLLTLPS 443
            SLGNLLR LVG+ PR WDI L QAEFA+N + +RSTG+SPF VVYG  P  P+DL  LP+
Sbjct: 1245 SLGNLLRSLVGNNPRQWDIVLPQAEFAYNRSTHRSTGMSPFLVVYGRNPFTPLDLAPLPT 1304

Query: 442  RTREDRRATDFMADLCQVHAATRAKLVDTTAKYKRAADTHRRQLEFSVGDYVWAVLTKDR 263
                     +  A +  +H   R ++ +    Y+R A+ HRR++ F+ GD VW  L+K R
Sbjct: 1305 TEHFSVEGEERSAQIKMIHKQVREQIENNNIVYQRRANVHRRRVVFNEGDLVWIHLSKAR 1364

Query: 262  YPAHDYHKLSARKIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCHLIPYHGENSFGDET 83
            +P   + KL  R  GP  +L++IN NAY++ LP H   S  FNV  L P+  E    ++ 
Sbjct: 1365 FPGGRFGKLQPRADGPFRVLKRINDNAYKIDLPGHYNVSATFNVADLSPFVPE----EDD 1420

Query: 82   DFDSRANHLQEGKND 38
             FDSRA+  +EG+ND
Sbjct: 1421 PFDSRASPFEEGEND 1435


>ref|XP_013746037.1| uncharacterized protein LOC106448737 [Brassica napus]
 ref|XP_013690050.1| uncharacterized protein LOC106393961 [Brassica napus]
          Length = 1236

 Score = 1321 bits (3418), Expect = 0.0
 Identities = 653/1146 (56%), Positives = 815/1146 (71%), Gaps = 18/1146 (1%)
 Frame = -1

Query: 4198 NPFAQFAHKDDLRGD-NGKHDDSRRWEHSFKIDIPEFHGTLDADEFLDWMVSVDEILDFK 4022
            NPFA   H++  R + + +H++  RW    KIDIPE+HG    ++ LDW V+VDE ++FK
Sbjct: 93   NPFADGNHRNRHRPEQHNRHNEDTRWMSGVKIDIPEYHGGSQPEDLLDWFVTVDEFIEFK 152

Query: 4021 DVPADRRVALVVTRLRGRASAWWQQLKTMRSRQSKPKLTSWDKFKTKLRNEFLPFNYSRT 3842
            +VP  +RV LV TR RG A++WW Q+KT R R+ K K+TSWDK K  +R  F+P+N+ R 
Sbjct: 153  EVPEQKRVPLVTTRFRGHAASWWSQIKTSRIRRGKEKITSWDKLKKHMRKTFIPYNFERL 212

Query: 3841 LYQKFQQLRQGSRTIDAYSDEFYQLLVRSDVRETDDQLVSRYIGGLRLQYQDVLNMFSPS 3662
            L+QKF  +RQGSR+++ YS+EFYQ+L R DV +++DQLV+RYI GLR Q Q +L+ F P 
Sbjct: 213  LFQKFHNIRQGSRSVEEYSNEFYQMLTRIDVHDSEDQLVARYIAGLRQQLQTMLHQFDPC 272

Query: 3661 SVSEAHQRAVLYEKQLLRRSPFPLPSSGNHFDRSPT------GSQIKPAPTLPSGSRAQG 3500
            SVSEA QRA+L E+Q    +      SGN   R+ T       S  +   T P  SR   
Sbjct: 273  SVSEARQRALLIEQQSRLSTN---QWSGNSRGRNTTTPDDSKNSTTRETTTTPPSSRPTT 329

Query: 3499 DLGFLXXXXXXXXXXXXXXXRCFNCGDPSHLQSACPKRASTRALYVDDVCDADFSSSPVY 3320
                                RCF CG+  H+Q+ACP       L      D +    P+Y
Sbjct: 330  R----PAEVVEGRPPRTGALRCFTCGERGHIQTACPTLGRRGLL----AADKEGMGDPIY 381

Query: 3319 DDDISAQPP--EEFLHGDVGQLLVLQRVCLTPRREDDDSMQRHKLFESTCTVQGKICRFI 3146
            DDD   +    E+ + GD G  L+L+R C  P  +  +  QR  LF STCTV+GKICRF+
Sbjct: 382  DDDEDLEDDIEEDQVAGDTGTFLMLRRNCFAP--QTSEPWQRTSLFSSTCTVKGKICRFV 439

Query: 3145 IDSGSCENVVAADAIQKLNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSV 2966
            IDSG   NVV+ +A++KLNL TE HP PY L W+Q   E+ V++R L++ SIG  Y D +
Sbjct: 440  IDSGCSANVVSEEAVRKLNLKTEAHPHPYRLLWMQTGAEVYVSQRTLISLSIGSFYKDEL 499

Query: 2965 WCDVVPMDACHLLLGRPWQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXP------- 2807
            +CD+ PMD  H++LGRPWQ+DR VIH+G+ NT SF+F G K+TLL               
Sbjct: 500  YCDIAPMDVSHIILGRPWQFDREVIHNGKTNTNSFMFQGRKITLLPSPDTTSTVATTTTP 559

Query: 2806 TDAHPRVLSISYSAFARAMDASS--FVLLLVSRDVSESPNVPSVVAPLLSEFADIFPDEL 2633
            + +   ++ IS S F + +  +   F L+ V+        +P+   PLL+EF D+FPDEL
Sbjct: 560  STSKQNLMIISRSQFEQELQETRPLFALVSVTPTPPHPTPLPTAFVPLLTEFEDLFPDEL 619

Query: 2632 PPGLPPLRMIQHQIDFIPGAKLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAV 2453
            P GLPPLR IQH ID +P A LPNR HYRMSP EHEELRRQ+E+LL +G++RESLSPCAV
Sbjct: 620  PAGLPPLRDIQHHIDLVPNAVLPNRAHYRMSPEEHEELRRQVEDLLIKGYVRESLSPCAV 679

Query: 2452 PALLIPKKDGAWRMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQI 2273
            PALLIPKKD +WRMCVDSRA+NKIT RY FPIPRLDDLLDQ+G A++F+KLDLKSGYHQI
Sbjct: 680  PALLIPKKDRSWRMCVDSRAINKITTRYRFPIPRLDDLLDQIGKASIFTKLDLKSGYHQI 739

Query: 2272 RIRPGDEWKTAFKTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILV 2093
            RIRPGDEWKTAFKTREGLFEWLVMPFGLSNAPSTFMR+MNQTLRP IG  VVVYFDDIL+
Sbjct: 740  RIRPGDEWKTAFKTREGLFEWLVMPFGLSNAPSTFMRVMNQTLRPFIGRFVVVYFDDILI 799

Query: 2092 YSKSVHDHLAHLRAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAI 1913
            +S ++ +HL HLR VL  LR +  + A  KC F   +VLFLGY VSA G+ VD  K+ A+
Sbjct: 800  FSTTMDEHLHHLREVLLALRKDKLFIARQKCEFGRSDVLFLGYVVSAAGLRVDPLKVEAV 859

Query: 1912 QDWPVPTTLTEVRSFHGLASFYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKH 1733
              WP PTT++E+RSFHGLASFYRRFI +FS+IMAP+TD M G SFSW   A  AF  IK 
Sbjct: 860  ASWPTPTTISEIRSFHGLASFYRRFIHNFSSIMAPVTDCMKGVSFSWTEDATRAFAIIKE 919

Query: 1732 KLTHAPLLALPDFSVPFELHSDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEF 1553
            KLT AP+L LPDF  PFELH DASK+G+GAVLSQ G P+A++SEKL   R RYSTYDIEF
Sbjct: 920  KLTTAPILVLPDFDAPFELHCDASKLGVGAVLSQFGRPVAFYSEKLAGARSRYSTYDIEF 979

Query: 1552 YAVVRAIRHWRHYLFHREFILYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSG 1373
            YA+V+AI+HWRHYL H+EFIL+TDH ALK++ +QD +S+RHA+W+A+LQQFTFV+KH+SG
Sbjct: 980  YAIVQAIKHWRHYLAHKEFILFTDHAALKYLGTQDKISSRHASWTAYLQQFTFVIKHKSG 1039

Query: 1372 ITNKVADALSRRHSLLVDMRIEVPGFDSFRELYATDSFFKIILSSLARGDASDFILHDGF 1193
              NKVADALSRRH+L+  +R+ V GF+   +LY TD+FF  I   L +G  SDF L DGF
Sbjct: 1040 KLNKVADALSRRHALVSTLRVSVTGFECLSDLYPTDAFFSPIWMDLTQGVRSDFSLVDGF 1099

Query: 1192 LFKGICLCVPMCSLRLRLVAELHSTGHVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRIC 1013
            +FK   LCVP CSLRL+++ ELH  GH+GRDR++ LV   YFWPTLRRDV RFVARC  C
Sbjct: 1100 VFKDNRLCVPTCSLRLQIIKELHGEGHIGRDRTLKLVAESYFWPTLRRDVERFVARCTSC 1159

Query: 1012 QVSKGTSTNAGLYRPLPIPSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPC 833
            Q  KG ++NAGLY PLP+P+QPW  +SMDFVLGLPRTQRGHDSIFVVVDRFSKM HFIPC
Sbjct: 1160 QQGKGQASNAGLYLPLPVPTQPWSDISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIPC 1219

Query: 832  KRSADA 815
            K++ DA
Sbjct: 1220 KKTTDA 1225


>ref|XP_013694892.2| uncharacterized protein LOC106398939 [Brassica napus]
          Length = 1472

 Score = 1286 bits (3327), Expect = 0.0
 Identities = 644/1156 (55%), Positives = 812/1156 (70%), Gaps = 19/1156 (1%)
 Frame = -1

Query: 4138 DSRRWEHSFKIDIPEFHGTLDADEFLDWMVSVDEILDFKDVPADRRVALVVTRLRGRASA 3959
            D+ RWE  F++D+PEF G+L  +EFLDW+   +E+L FK VP  +RV+LV TR +GRASA
Sbjct: 189  DNHRWESGFRLDLPEFSGSLKPEEFLDWISMTEELLTFKSVPDVKRVSLVATRFKGRASA 248

Query: 3958 WWQQLKTMRSRQSKPKLTSWDKFKTKLRNEFLPFNYSRTLYQKFQQLRQGSRTIDAYSDE 3779
            WWQQLK  R    K  + SW+K K  +R  FLP+NY+RT+Y +FQ LRQG+R +D Y+ E
Sbjct: 249  WWQQLKLQRVNSGKGPINSWEKLKKHMRQYFLPYNYARTIYTQFQNLRQGNRCVDEYASE 308

Query: 3778 FYQLLVRSDVRETDDQLVSRYIGGLRLQYQDVLNMFSPSSVSEAHQRAVLYEKQLLRRSP 3599
            F+ L+ R+++ E ++  VSR+IGGL+ Q Q+ L +F+P+SVSEAHQRAVL E+ L   S 
Sbjct: 309  FFSLMARNNLFEIEENSVSRFIGGLKQQIQNNLLLFNPTSVSEAHQRAVLIEQNLRGSSM 368

Query: 3598 FPLPSSGNHFDRSPTGSQIKPAPTLPSGSRAQGDLGFLXXXXXXXXXXXXXXXRCFNCGD 3419
            +   SS +    S   S        PS S    D+G                 +CFNCG+
Sbjct: 369  WTASSSRSRAGASGETSHATKTELPPSSSTP--DVG---ASNTAQRQTRTLTFKCFNCGE 423

Query: 3418 PSHLQSACPKRASTRALYVDDVCDADFSSSPVYDDDISAQPP---EEFLHGDVGQLLVLQ 3248
              H Q+ CPKR     L+ +D          +YDD    Q     EE + GD+G +LV++
Sbjct: 424  AGHRQANCPKRV----LFGED--------EVIYDDTEEEQQQTETEEQVAGDIGTILVVR 471

Query: 3247 RVCLTPRREDDDSMQRHKLFESTCTVQGKICRFIIDSGSCENVVAADAIQKLNLSTEPHP 3068
            R CL P+  ++ S  R  LF +TCT++GK+CR I+DSGSC N+V+ +A+ KL L TEPHP
Sbjct: 472  RNCLLPQAMEE-SWLRTNLFRTTCTIRGKVCRLIVDSGSCTNIVSEEAVAKLALFTEPHP 530

Query: 3067 TPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVWCDVVPMDACHLLLGRPWQYDRGVIH 2888
             PY LAWL    ++ +T+   +  SIG  Y D V CDV+PMDACH+LLGRPWQYDR  IH
Sbjct: 531  VPYRLAWLNTKTDLRITKMCRVPLSIGSSYKDLVCCDVIPMDACHILLGRPWQYDRRTIH 590

Query: 2887 DGRQNTYSFLFHGVKVTLLXXXXXXXPTDA--------------HPRVLSISYSAFARAM 2750
            DG  NTY+F F   ++TLL       P  A              HP VL ++ + F    
Sbjct: 591  DGFLNTYAFSFEDKRITLLPSQETSQPAKAETPKASPMEVLKPSHP-VLFVNQTQFVEEC 649

Query: 2749 DASSFVLLLVSRDVSESP--NVPSVVAPLLSEFADIFPDELPPGLPPLRMIQHQIDFIPG 2576
              S+  + L+ + VS     +VPS    L++EF D+FPD+LP GLPPLR IQH ID    
Sbjct: 650  KISNGGMALIIKPVSAQLICDVPSEFKDLVTEFRDVFPDDLPSGLPPLRDIQHCIDLTSN 709

Query: 2575 AKLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPALLIPKKDGAWRMCVDSR 2396
            A LPNRPHYRMSP EH+ELRR +EELL +G++RESLS CAVPALLIPKKDG+WRMCVDSR
Sbjct: 710  AALPNRPHYRMSPQEHDELRRHVEELLAKGYLRESLSLCAVPALLIPKKDGSWRMCVDSR 769

Query: 2395 ALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAFKTREGLF 2216
            A+NKITVRY FPIP LDDLLDQ+G A +F+KLDLKSGYHQIRIRPGD WKTAFKTREGLF
Sbjct: 770  AINKITVRYRFPIPCLDDLLDQIGSARIFTKLDLKSGYHQIRIRPGDVWKTAFKTREGLF 829

Query: 2215 EWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHLRAVLSIL 2036
            EWLVMPFGLSNAPSTFMR+MNQ LRP IG CVVVYFD IL++S S+ DHL HLR VL++L
Sbjct: 830  EWLVMPFGLSNAPSTFMRVMNQALRPFIGRCVVVYFDYILIFSSSLSDHLEHLRDVLTVL 889

Query: 2035 RTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEVRSFHGLA 1856
            R E  + A  KC F    VLFLGY VS  G+ VD +K+ AI  WP P T+TE+RSFHGLA
Sbjct: 890  RREKLFGAAKKCAFGVSQVLFLGYIVSQQGLSVDPSKVEAIHSWPTPRTVTEIRSFHGLA 949

Query: 1855 SFYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKLTHAPLLALPDFSVPFEL 1676
            SFYRRF+ HFS+IMAPITD +   +F+W  +A  AF  IK KLT AP+L+LP+F + FEL
Sbjct: 950  SFYRRFVHHFSSIMAPITDCIKSSTFTWTDKAEEAFRVIKTKLTTAPVLSLPNFDLAFEL 1009

Query: 1675 HSDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAVVRAIRHWRHYLFHREF 1496
            H DASK GIGAVLSQ   P+A+FSEK++ +R RY TYD+E YAVV+A++HWRHYLFHREF
Sbjct: 1010 HCDASKSGIGAVLSQEKKPVAFFSEKISGSRERYRTYDVELYAVVQAVKHWRHYLFHREF 1069

Query: 1495 ILYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITNKVADALSRRHSLLVDM 1316
            +LYTDH+ALKH++SQD +++RHA+W ++LQQFTFV+KH++G  NKVADALSRRH+LL  M
Sbjct: 1070 VLYTDHDALKHMSSQDKVTSRHASWFSYLQQFTFVIKHKAGALNKVADALSRRHTLLASM 1129

Query: 1315 RIEVPGFDSFRELYATDSFFKIILSSLARGDASDFILHDGFLFKGICLCVPMCSLRLRLV 1136
             + V GF++  +LY  D FF  I + L    +S++++ DGFLF+G  LC+P  SLRL+++
Sbjct: 1130 HVSVVGFETLPDLYPLDPFFSKIWNDLQLNRSSEYVIVDGFLFRGNKLCIPESSLRLQVI 1189

Query: 1135 AELHSTGHVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRICQVSKGTSTNAGLYRPLPIP 956
             E H+ GHVGRDR++ LV   YFWP+LRRDV RF+ RC ICQ SKG ++NAGLY PLPIP
Sbjct: 1190 REFHNEGHVGRDRTLQLVTSSYFWPSLRRDVERFIVRCGICQASKGHASNAGLYLPLPIP 1249

Query: 955  SQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPCKRSADAVHVAQLFFREVYR 776
            SQPW  +SMDFVLGLPRTQRG DSIFVVVDRFSKMVHF+PCK++ DAV  + L   E   
Sbjct: 1250 SQPWTDISMDFVLGLPRTQRGFDSIFVVVDRFSKMVHFVPCKKTTDAVQDSVLCQAEFAH 1309

Query: 775  LHGLPVSIVSDRDTRF 728
             H +      +R TRF
Sbjct: 1310 NHAV------NRSTRF 1319



 Score =  192 bits (487), Expect = 2e-45
 Identities = 95/175 (54%), Positives = 121/175 (69%)
 Frame = -1

Query: 586  TPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGFLPRAPVDLLTLPSRTREDRRATDFM 407
            T    D  L QAEFAHN A+NRST  SPF V+YG +PR+P+DL   P RTR   RA D +
Sbjct: 1294 TDAVQDSVLCQAEFAHNHAVNRSTRFSPFYVIYGVVPRSPIDLNIAPDRTRSHGRACDMI 1353

Query: 406  ADLCQVHAATRAKLVDTTAKYKRAADTHRRQLEFSVGDYVWAVLTKDRYPAHDYHKLSAR 227
             D   +H   +A L   T KYK + D+ RR L+F VGD VWAVLTK+R+P + Y+KL +R
Sbjct: 1354 EDFTSIHQQVKANLEAATLKYKTSVDSRRRDLQFQVGDKVWAVLTKERFPPNSYNKLKSR 1413

Query: 226  KIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCHLIPYHGENSFGDETDFDSRAN 62
            K+GP+E+LEKIN NAYRLR P+H+ TSDVFNV HL+ Y  E+   +E + +SRAN
Sbjct: 1414 KVGPLEVLEKINNNAYRLRQPSHMNTSDVFNVKHLVGYLSED---EEDNANSRAN 1465


>gb|PKU87302.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1459

 Score = 1271 bits (3290), Expect = 0.0
 Identities = 655/1470 (44%), Positives = 922/1470 (62%), Gaps = 22/1470 (1%)
 Frame = -1

Query: 4369 QQFGDLRAQNQHIMDMLAGQFAAGRGVTHNAPRGPDRGIGVAPXXXXXXXXXXXXXDNPF 4190
            Q   +LR + Q + D LA      +G T +    P                     +NPF
Sbjct: 14   QTIEELRQEIQRLQDKLAAVEVNQQGETSHEREEPH---------------PEEADENPF 58

Query: 4189 AQFAHKDDLRGDNG-----KHDDSRRWEHSF--KIDIPEFHGTLDADEFLDWMVSVDEIL 4031
                H++ L G++         + RR  H +  ++D+PEF G LD DEF++W+ +++ IL
Sbjct: 59   ----HREGLSGEDDIPLRYLRREPRRSTHDYGIRLDLPEFEGRLDPDEFINWLHTIERIL 114

Query: 4030 DFKDVPADRRVALVVTRLRGRASAWWQQLKTMRSRQSKPKLTSWDKFKTKLRNEFLPFNY 3851
            D+K++P +R V LV  +L+G AS WW+ LK  R R+ K ++T+W K   +L+ +FLP +Y
Sbjct: 115  DYKEIPQERIVKLVAIKLKGNASLWWENLKRSRQREGKSRITTWAKMIKELQKKFLPMHY 174

Query: 3850 SRTLYQKFQQLRQGSRTIDAYSDEFYQLLVRSDVRETDDQLVSRYIGGLRLQYQDVLNMF 3671
             + ++ +   L+Q   +++ Y+ EF QL ++  + E ++  ++R++GGL     +++++ 
Sbjct: 175  RQDMFLRLHNLQQHELSVEEYAAEFEQLGLKCQLEEPEENTIARFLGGLHSSISNIVHLQ 234

Query: 3670 SPSSVSEAHQRAVLYEKQLL---RRSPFPLPSSGNHFDRSPTGSQIKPAP-TLPSGSRAQ 3503
               ++S+    ++  EKQL    RR       +G H    PT S+++    T P      
Sbjct: 235  PYWTLSDVINLSLKVEKQLKQGKRRISTGEQLTGTH----PTSSKLQEKRNTNPYVPNVG 290

Query: 3502 GDLGFLXXXXXXXXXXXXXXXRCFNCGDPSHLQSACPKRASTRALYVDDVCDADFSSSPV 3323
             ++                  RCF C    H+ + CP R   R + + +    D  S   
Sbjct: 291  PNVTHPRPITNSQSTNPIPARRCFKCHGFGHIAANCPTR---RLVTLMEEVQMDEDSGE- 346

Query: 3322 YDDDISAQPPEEFLHGDVGQLLVLQRVCLTPRREDDDSMQRHKLFESTCTVQGKICRFII 3143
              +    Q  E+ +  D G+LLV++R+ L  + E      RH +F + CTV GK+C  II
Sbjct: 347  -GNSTQLQETEQIIPADEGELLVIRRL-LNTQYEPKRQWLRHNIFRTRCTVHGKVCNLII 404

Query: 3142 DSGSCENVVAADAIQKLNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVW 2963
            DSGSCENVV++  I+KL L+T+PHP  Y L WL++ NEI V R+ L+ FS+G  + + V 
Sbjct: 405  DSGSCENVVSSLMIEKLQLATQPHPQLYKLVWLKKGNEIEVNRQCLVQFSMGKDFQEQVL 464

Query: 2962 CDVVPMDACHLLLGRPWQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXPTDA-HPRV 2786
            CDVVPMDACHLLLGRPWQYDR  IHDG  NTYSF  +G    L           A  P  
Sbjct: 465  CDVVPMDACHLLLGRPWQYDRKTIHDGFHNTYSFQDNGRTRILTPYNDNQEKKPATQPTE 524

Query: 2785 L------SISYSAFARAMDASSF-VLLLVSRDVSESPNVPSVVAPLLSEFADIFPDELPP 2627
            L      + S + F +A+ A    ++LL+  +  E    PS + PLL EF  +FPD+LP 
Sbjct: 525  LLQLTTKTESTNMFTQALKAEQHGLVLLLLVENKEQKQHPSEIQPLLREFHQVFPDKLPT 584

Query: 2626 GLPPLRMIQHQIDFIPGAKLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPA 2447
            G+PP+R +QH +DFIPG+ +PNRP YRMSP  +EEL+RQ+EEL+  G +R S SPCAVPA
Sbjct: 585  GVPPMREVQHAVDFIPGSVIPNRPTYRMSPKNYEELQRQVEELISAGFVRPSASPCAVPA 644

Query: 2446 LLIPKKDGAWRMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRI 2267
            LL+PKKDG WRMC+DSR +NKIT++Y FPIPR+DDL DQL GA +FSK+DL+SGYHQIR+
Sbjct: 645  LLVPKKDGTWRMCIDSRTVNKITIKYRFPIPRVDDLFDQLSGACIFSKIDLRSGYHQIRM 704

Query: 2266 RPGDEWKTAFKTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYS 2087
            RPGDEWKTAFKTR+GL+EW VMPFGLSNAPSTFMR+MNQ  R  +   +V+YFDDIL+YS
Sbjct: 705  RPGDEWKTAFKTRDGLYEWTVMPFGLSNAPSTFMRLMNQVFRSYLNKFLVIYFDDILIYS 764

Query: 2086 KSVHDHLAHLRAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQD 1907
            +++ +HL HL+ V  +L  +  +A  +KC FL + + FLG+ +S TG+ +D  K+ AI  
Sbjct: 765  QNMEEHLQHLKQVFLVLLEQHLFANTTKCEFLVDTIKFLGFVISPTGLEMDFDKVKAIHG 824

Query: 1906 WPVPTTLTEVRSFHGLASFYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKL 1727
            WP PT++ +VR FHGLASFYRRFI +FS + AP+T+++    F W   A  +F  +K  +
Sbjct: 825  WPTPTSINDVRRFHGLASFYRRFIQNFSMVAAPLTEILKRPQFEWTKAAQESFDQLKDLM 884

Query: 1726 THAPLLALPDFSVPFELHSDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYA 1547
              AP+L LP+FS  FE+  DAS+ GIGAVLSQ GHP+AYFSEKLN +R +YS YD EFYA
Sbjct: 885  QRAPVLTLPNFSKVFEVECDASQNGIGAVLSQEGHPVAYFSEKLNESRQKYSIYDKEFYA 944

Query: 1546 VVRAIRHWRHYLFHREFILYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGIT 1367
            +VRA+++W HYL  +EFIL+TDH++LKH+  Q  L+ RHA W  +L  F + +K++SG T
Sbjct: 945  IVRALQYWSHYLLGQEFILFTDHQSLKHLQYQSKLNTRHAKWVEYLSSFHYSLKYKSGTT 1004

Query: 1366 NKVADALSRRHSLLVDMRIEVPGFDSFRELYATDSFFKIILSSLARGDASDFILHDGFLF 1187
            N+VADALSRRH LL  ++++  GF+  ++LY  D  F  I           F L   +LF
Sbjct: 1005 NQVADALSRRHMLLNTLQVKTVGFEIIKDLYEKDPDFAKIWQLCLLKPYKFFHLEQKYLF 1064

Query: 1186 KGICLCVPMCSLRLRLVAELHS---TGHVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRI 1016
            KG  LC+P  SLR  ++ E H+    GH GRD+++ L+   ++WP+L +DV+R + RC I
Sbjct: 1065 KGNKLCIPQGSLREAIIFENHNGGLAGHFGRDKTLALIHENFYWPSLEKDVTRHIKRCHI 1124

Query: 1015 CQVSKGTSTNAGLYRPLPIPSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIP 836
            C+++K T  N GLY PLP+P  PW  +SMDFVLGLP TQR +D+I VVVDRFSKM HFIP
Sbjct: 1125 CKMAKTTQHNTGLYLPLPVPESPWIDVSMDFVLGLPITQRKNDAIMVVVDRFSKMAHFIP 1184

Query: 835  CKRSADAVHVAQLFFREVYRLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSAYHP 656
            C +++DA H+A+L+F EV RLHG+P +I SDRD +FLSHFWR+LWS   T+L FSS  HP
Sbjct: 1185 CHKTSDASHIARLYFHEVVRLHGIPKTITSDRDVKFLSHFWRTLWSKLGTKLQFSSTAHP 1244

Query: 655  QTDGQTEVVNRSLGNLLRCLVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGFLP 476
            QTDGQTE VNRSLGNLLRC VG + R+WD  L Q EFA+N + N++TG SPF++VYG  P
Sbjct: 1245 QTDGQTESVNRSLGNLLRCFVGKSIRSWDEILGQVEFAYNKSRNQTTGRSPFEIVYGQNP 1304

Query: 475  RAPVDLLTLPSRTREDRRATDFMADLCQVHAATRAKLVDTTAKYKRAADTHRRQLEFSVG 296
              P++L  L S T     A   + ++ Q+H   +  +     KY++ A+  RR   F  G
Sbjct: 1305 TGPLELTPLLSSTAHSLDADTRVKEIQQLHKQIQQHIQKQNTKYQQQANKSRRGETFKEG 1364

Query: 295  DYVWAVLTKDRYPAHDYHKLSARKIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCHLIP 116
            D VW  L+K+R+P   Y+KL  +  GP  IL +IN NA+++ L ++L+ S VFN+  L  
Sbjct: 1365 DLVWIRLSKERFPNRRYNKLQPKAKGPFRILRRINDNAFQIELLDNLQISPVFNISDL-S 1423

Query: 115  YHGENSFGDETDFDSRANHLQEGKNDGVET 26
            +H      D+ +  ++      G  + VET
Sbjct: 1424 HHYPMELTDQAEDIAQPQQANNGHTEHVET 1453


>gb|PKU63120.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1500

 Score = 1269 bits (3283), Expect = 0.0
 Identities = 655/1370 (47%), Positives = 879/1370 (64%), Gaps = 26/1370 (1%)
 Frame = -1

Query: 4123 EHSFKIDIPEFHGTLDADEFLDWMVSVDEILDFKDVPADRRVALVVTRLRGRASAWWQQL 3944
            E   K+DIP F G L  +++LDW  +V+   D+ ++P +++V  V  RL+G ASAWW QL
Sbjct: 135  EFRVKLDIPFFEGRLHIEDYLDWERAVETFFDYMEIPPEKQVKYVACRLKGGASAWWMQL 194

Query: 3943 KTMRSRQSKPKLTSWDKFKTKLRNEFLPFNYSRTLYQKFQQLRQGSRTIDAYSDEFYQLL 3764
            +  R R+ K  + +W + K  +R  FLP +Y + LY ++Q   QG+R++  Y++EFY+L 
Sbjct: 195  QQNRQREGKGPVRNWYRMKQMMRGHFLPTDYEQMLYLQYQHCVQGARSVSGYTEEFYRLS 254

Query: 3763 VRSDVRETDDQLVSRYIGGLRLQYQDVLNMFSPSSVSEAHQRAVLYEKQLLRRSP----- 3599
             R+++RE+D+QLV+RY GGL+   QD L + S  ++S+A   A+  E QL ++S      
Sbjct: 255  ARNNLRESDNQLVARYTGGLKESLQDKLQLNSLWTLSQAVNFALKAELQLSKQSKNYSNR 314

Query: 3598 --FPLPSSGNHFDRSP--------TGSQIKPAPTLPSGSRAQGDLGFLXXXXXXXXXXXX 3449
                 PS+ +     P        T SQ  PA    + +R +                  
Sbjct: 315  RQLVDPSTESRQYSQPKLMSPVSATNSQPTPASDSQTAARPR-------PPPRNNPYAKP 367

Query: 3448 XXXRCFNCGDPSHLQSACPKRASTRALYVDDVCDADFSSSPVYDDDISAQPPEEFLHGDV 3269
               +CF C  P H  + CP R   + +  D+    +++  P  +DD+      E L  D 
Sbjct: 368  TTLKCFRCFQPGHKSNECPTRPQLQIVEGDNEEGVEYN--PDTNDDVF-----EELTPDE 420

Query: 3268 GQLLV--LQRVCLTPRREDDDSMQRHKLFESTCTVQGKICRFIIDSGSCENVVAADAIQK 3095
            G+ +V  L+R+ L PR+    + QR+ +F + CT+ G++C  +ID+G  ENVV+   +Q 
Sbjct: 421  GEAVVCILERLLLAPRQPT--TSQRNAIFRTRCTIGGRVCELLIDNGCTENVVSRSLVQA 478

Query: 3094 LNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVWCDVVPMDACHLLLGRP 2915
            L L T  +P PY ++W+++  EI++T    + FSIG  Y   V CDV+ MD CHL+LGRP
Sbjct: 479  LQLKTTKNPQPYKISWVKKGVEISITDMCRVNFSIGKSYVCEVLCDVIDMDVCHLILGRP 538

Query: 2914 WQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXPTDAHPRVLSISYSAFARAMDASSF 2735
            WQYD G I+D R NTYSF + G K+ LL          A  + +    S  A   D++  
Sbjct: 539  WQYDNGAIYDCRYNTYSFEWKGRKLKLLPHPAASHSNVAKDKAVLNLVSGAALLADSAPC 598

Query: 2734 VLLLVSRDVS----ESPNVPSVVAPLLSEFADIFPDELPPGLPPLRMIQHQIDFIPGAKL 2567
            +  LVS D+     ++P +P +   LL EF DI P ELPP LPP+ MIQHQID +PGA L
Sbjct: 599  IYALVSVDLGPNQMQTPTLPQI-DELLREFQDIMPSELPPELPPIHMIQHQIDLVPGANL 657

Query: 2566 PNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPALLIPKKDGAWRMCVDSRALN 2387
            PN PHYRMSP EHE L+  +++LL +  I+ SLSPCAVPALL+PKKD  WRMC+DSRA+N
Sbjct: 658  PNLPHYRMSPKEHELLQEMVDDLLRQKLIQPSLSPCAVPALLVPKKDNKWRMCIDSRAIN 717

Query: 2386 KITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAFKTREGLFEWL 2207
            KIT +Y FP+PR++D+LD+L G+ VFSKLDL+SGYHQIRIRPGDEWKTAFKT++GLFEW 
Sbjct: 718  KITTKYRFPVPRIEDMLDKLAGSRVFSKLDLRSGYHQIRIRPGDEWKTAFKTKQGLFEWR 777

Query: 2206 VMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHLRAVLSILRTE 2027
            VMPFGL NAP+TFM +M + L+       VVYFDDIL+YS S  DH+ HL  VL  LR  
Sbjct: 778  VMPFGLCNAPATFMHLMTEVLKDHHNRFCVVYFDDILIYSSSFEDHIGHLTKVLQTLREH 837

Query: 2026 CFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEVRSFHGLASFY 1847
              Y   SKC F T  V FLG+ VSA G+  D  KI AI+DWP+P T+ +VRSFHGLA+FY
Sbjct: 838  HLYLNSSKCEFATAQVYFLGFIVSADGVATDPRKILAIRDWPIPRTMFDVRSFHGLANFY 897

Query: 1846 RRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKLTHAPLLALPDFSVPFELHSD 1667
            RRFI  FS IMAPI D +  K   W      ++  IK  L+ AP+LALP+F +PF++ +D
Sbjct: 898  RRFIRGFSIIMAPIMDCLKAKQLHWNESCQRSWDTIKEALSSAPVLALPNFDLPFQVDTD 957

Query: 1666 ASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAVVRAIRHWRHYLFHREFILY 1487
            AS +GIGAVLSQ   PI +FSEKL+  R +++ Y+ E YAVVRA++HW HYL H+EFIL 
Sbjct: 958  ASTIGIGAVLSQSDRPIEFFSEKLSTARQKWTVYEQELYAVVRALKHWEHYLLHQEFILS 1017

Query: 1486 TDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITNKVADALSRRHSLLVDMRIE 1307
            +DH+AL+ +NSQ +++  HA W  FLQ+FTFV+KH+SG  N+VADALSRR +LL  ++ E
Sbjct: 1018 SDHKALQFLNSQKTINRMHARWILFLQKFTFVLKHKSGNQNRVADALSRRTALLTQLQTE 1077

Query: 1306 VPGFDSFRELYATDSFFKIILSSLARGD-ASDFILHDGFLFKGICLCVPMCSLRLRLVAE 1130
            + G +  +ELY+ D  F I     A     +D+ +  G+LFKG  LC+P  S R +L+ E
Sbjct: 1078 LTGLECLQELYSEDPDFAIPWQQCAASQPTADYSVRHGYLFKGNALCIPDSSYRQQLIKE 1137

Query: 1129 LHSTG---HVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRICQVSKGTSTNAGLYRPLPI 959
             H+ G   H+GR+++I  ++ ++FWP L RDVSRFV RC +CQ  KG   NAGLY PL +
Sbjct: 1138 AHAGGLAAHLGREKTIQQLKARFFWPKLHRDVSRFVERCAVCQEFKGNKQNAGLYMPLSV 1197

Query: 958  PSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPCKRSADAVHVAQLFFREVY 779
            P   W  +S+DFVLGLPRTQRG DSI VVVDRFSKM HF+ C++S DAV+VA+LFF E+ 
Sbjct: 1198 PDSIWEDISIDFVLGLPRTQRGADSIMVVVDRFSKMAHFVACRKSLDAVNVARLFFNEIV 1257

Query: 778  RLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSAYHPQTDGQTEVVNRSLGNLLRC 599
            RLHGLP SI SDRD +F+SHFWR LW   +T L+ SSAYHPQ+DGQTEV+N++LGN+LRC
Sbjct: 1258 RLHGLPRSITSDRDVKFVSHFWRELWKRLHTSLNLSSAYHPQSDGQTEVINKTLGNMLRC 1317

Query: 598  LVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGFLPRAPVDLLTLPSRTREDRRA 419
            LV   P+ W+  LSQAEFA+N   NRSTG  PF +VY   P    D+  LP    +   A
Sbjct: 1318 LVQHQPKQWENALSQAEFAYNSMPNRSTGQCPFAIVYTKAPNHLFDIAVLPKCANKSATA 1377

Query: 418  TDFMADLCQ-VHAATRAKLVDTTAKYKRAADTHRRQLEFSVGDYVWAVLTKDRYPAHDYH 242
               + D CQ V    R KL+ + + YK+AAD HRR + F  GD V   L KDR+PA    
Sbjct: 1378 ---LTDQCQSVLDEVRMKLITSNSTYKKAADLHRRHVSFQPGDLVLIRLRKDRFPAGANS 1434

Query: 241  KLSARKIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCHLIPYHGENSFG 92
            KLS RK GPV IL++IN NAY + LP+ + TS  FNV  L PYH  +  G
Sbjct: 1435 KLSPRKFGPVPILKRINDNAYVVDLPDTMHTSKTFNVEDLFPYHPPDDAG 1484


>gb|PKU85169.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1500

 Score = 1263 bits (3269), Expect = 0.0
 Identities = 652/1365 (47%), Positives = 867/1365 (63%), Gaps = 27/1365 (1%)
 Frame = -1

Query: 4123 EHSFKIDIPEFHGTLDADEFLDWMVSVDEILDFKDVPADRRVALVVTRLRGRASAWWQQL 3944
            E   K+DIP F G +  +++LDW  SV+   D+ DVP +++V  V  RL+G ASAWW Q+
Sbjct: 130  EFRAKLDIPFFEGRIHIEDYLDWERSVETFFDYMDVPPEKQVKYVACRLKGGASAWWMQV 189

Query: 3943 KTMRSRQSKPKLTSWDKFKTKLRNEFLPFNYSRTLYQKFQQLRQGSRTIDAYSDEFYQLL 3764
            +  R R  K  + SW + K  LR  FLP +Y + LY ++QQ  QGS+T+  Y++EFY+L 
Sbjct: 190  QQTRFRSGKGNVRSWARMKQMLRAHFLPTDYEQLLYVRYQQCVQGSKTVSEYTEEFYRLS 249

Query: 3763 VRSDVRETDDQLVSRYIGGLRLQYQDVLNMFSPSSVSEAHQRAVLYEKQLLRRSPFPLPS 3584
             R++++E++ QLV+RY  GLR   QD L + S  ++S+A   A+  E QL R+     P 
Sbjct: 250  ARNNLQESESQLVARYTSGLREVIQDKLELNSVWTLSQAINFALKAEVQLSRQ-----PR 304

Query: 3583 SGNHFDRSPTGSQIKPAPTL---------------PSGSRAQGDLGFLXXXXXXXXXXXX 3449
            S N + R+ T   + P P L               P  S  Q     L            
Sbjct: 305  STN-YRRTLTDLVVDPKPRLQDSKSPQQSPQVSINPGTSAPQDPKAALKPKVPARDNPYS 363

Query: 3448 XXXR--CFNCGDPSHLQSACPKRASTRALYVDDVCDADFSSSPVYDDDISAQPPEEFLHG 3275
                  CF C    H  + CP R   + +  +     +  +       +  +   E L  
Sbjct: 364  RPSTLKCFRCFQVGHKSNECPTRPQIQLVEGEAEETGELPA-------VELEAEFEDLAA 416

Query: 3274 DVGQ--LLVLQRVCLTPRREDDDSMQRHKLFESTCTVQGKICRFIIDSGSCENVVAADAI 3101
            D G   + V++R+ L PR+      QR+ +F + CT+ GK+C  +ID+G  EN+V+   +
Sbjct: 417  DEGDQVVCVMERLLLAPRQPSVS--QRNAIFRTRCTINGKVCDLLIDNGCTENIVSKALV 474

Query: 3100 QKLNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVWCDVVPMDACHLLLG 2921
            Q L L T  +P PY ++W+++  E+ VT    LTFS+G  YT  V CDV+ MD CH++LG
Sbjct: 475  QVLQLKTTRNPHPYKISWVKKGVEVLVTEMCRLTFSVGRSYTCEVLCDVLEMDVCHVILG 534

Query: 2920 RPWQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXPTDAHPRV-LSISYSAFARAMDA 2744
            RPWQ+D GVI+DGR NTY+F + G K+ LL          A  +    +   A       
Sbjct: 535  RPWQFDTGVIYDGRMNTYAFDWKGRKLRLLPNTAPDNIPKAKDKAAFHLVTGAMLMTQRK 594

Query: 2743 SSFVLLLVSRDVSESPNV---PSVVAPLLSEFADIFPDELPPGLPPLRMIQHQIDFIPGA 2573
               V  +V  D   + NV   P  +  LL +FADI PDELP GLP  R IQHQID IPGA
Sbjct: 595  REEVFAIVVTDTPPTTNVSPPPQAITELLLQFADIMPDELPAGLPQTRPIQHQIDLIPGA 654

Query: 2572 KLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPALLIPKKDGAWRMCVDSRA 2393
             LPN PHY+MSP EH+ L+ ++EELL +  I+ SLSPCAVPALL+PKKD  WRMC+DSRA
Sbjct: 655  NLPNLPHYKMSPREHDILQERVEELLRKQLIQPSLSPCAVPALLVPKKDNQWRMCIDSRA 714

Query: 2392 LNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAFKTREGLFE 2213
            +NKIT ++ FP+PRL+DLLD+L GA+ FSKLDL+SGYHQIRIRPGDEWKTAFKT  GL+E
Sbjct: 715  INKITTKFRFPVPRLEDLLDKLAGASYFSKLDLRSGYHQIRIRPGDEWKTAFKTSRGLYE 774

Query: 2212 WLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHLRAVLSILR 2033
            W VMPFGL NAP+TFMR+MN+ L+  I +  VVYFDDILVYS S+ DH  HL ++   LR
Sbjct: 775  WRVMPFGLCNAPATFMRLMNEVLKDFINNFCVVYFDDILVYSTSLEDHTQHLCSIFQALR 834

Query: 2032 TECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEVRSFHGLAS 1853
                +   +KC F T  V FLG+ +SA GI  D  K+AAI DWP P +L +VRSFHGLA+
Sbjct: 835  RHQLFLNHAKCEFATSTVYFLGFIISAAGITTDPRKVAAIVDWPPPRSLFDVRSFHGLAN 894

Query: 1852 FYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKLTHAPLLALPDFSVPFELH 1673
            FYRRFI  FS +MAP+TD +  K FSW  +   ++  IK  L+ AP+LALP+F +PF++ 
Sbjct: 895  FYRRFIRGFSILMAPLTDCLKAKQFSWDDEKQRSWESIKQALSSAPVLALPNFELPFQVD 954

Query: 1672 SDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAVVRAIRHWRHYLFHREFI 1493
            SDAS +GIGAVLSQ   PI +FSEKL   R +++ Y+ E YAV+RA++HW HYL H++F+
Sbjct: 955  SDASMIGIGAVLSQADKPIEFFSEKLTPPRQKWTVYEQELYAVIRALKHWEHYLLHKDFV 1014

Query: 1492 LYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITNKVADALSRRHSLLVDMR 1313
            L +DH AL+ IN+Q +L+  HA W  FLQ+FTFV+KH+SG  N+VADALSRR +LL  ++
Sbjct: 1015 LCSDHRALQFINTQKTLNRMHARWVLFLQKFTFVLKHKSGAQNRVADALSRRTALLTQLQ 1074

Query: 1312 IEVPGFDSFRELYATDSFFKIILSSLARGDA-SDFILHDGFLFKGICLCVPMCSLRLRLV 1136
             E+ G D  ++LYATD  F+ I    + G A  ++ L  G+LFKG  LC+P  S R +L+
Sbjct: 1075 TEITGLDCLKDLYATDPDFEHIWKDCSGGQAHGEYTLRHGYLFKGNALCIPSSSWRHQLI 1134

Query: 1135 AELHSTG---HVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRICQVSKGTSTNAGLYRPL 965
             E HS G   H+GRD++   ++ ++FWP L RDV+R V RC +CQ  KGT  N GLY PL
Sbjct: 1135 LEAHSGGLAAHLGRDKTFQQLQEKFFWPKLHRDVARLVERCSVCQEYKGTMQNTGLYTPL 1194

Query: 964  PIPSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPCKRSADAVHVAQLFFRE 785
            P+P   W  +S+DFVLGLPRT+RG DSI VVVDR SKM HF+ CK++ DAV+VA+LFF E
Sbjct: 1195 PVPETIWEDISIDFVLGLPRTKRGSDSIMVVVDRLSKMAHFVACKKTLDAVNVARLFFHE 1254

Query: 784  VYRLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSAYHPQTDGQTEVVNRSLGNLL 605
            + RLHGLP SI SDRD +F+SHFWR LW   +T ++ SSAYHPQ+DGQTEVVNR+LGN+L
Sbjct: 1255 IVRLHGLPRSITSDRDVKFISHFWRELWKRLHTAINLSSAYHPQSDGQTEVVNRTLGNML 1314

Query: 604  RCLVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGFLPRAPVDLLTLPSRTREDR 425
            RCLV   P+ W+  L QAEFA+N   NRSTG SPF +VY   P    D+  LP  +  D+
Sbjct: 1315 RCLVQSHPKQWEEFLGQAEFAYNSMCNRSTGKSPFSIVYTKSPNHLFDIAVLPKCS--DK 1372

Query: 424  RATDFMADLCQVHAATRAKLVDTTAKYKRAADTHRRQLEFSVGDYVWAVLTKDRYPAHDY 245
             AT  +     V    R KL+ + A YK+AAD HRR   F+ GD V   + K+R+PA  Y
Sbjct: 1373 TATHLLEQYSDVIQQVRNKLITSNATYKQAADVHRRAKIFNPGDLVMVRMRKERFPAGTY 1432

Query: 244  HKLSARKIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCHLIPYH 110
             KLS RK+GPV I ++IN NAY + LP ++ TS  FNV  +  YH
Sbjct: 1433 SKLSPRKLGPVPITKRINDNAYIVELPANIYTSSTFNVADITSYH 1477


>gb|PKU71894.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1510

 Score = 1257 bits (3252), Expect = 0.0
 Identities = 655/1392 (47%), Positives = 882/1392 (63%), Gaps = 42/1392 (3%)
 Frame = -1

Query: 4132 RRWEH--------SFKIDIPEFHGTLDADEFLDWMVSVDEILDFKDVPADRRVALVVTRL 3977
            RR EH          K+DIP F G L  +++LDW  +++   ++ ++  +++V  V  RL
Sbjct: 120  RRAEHIHQAQGGFKIKMDIPYFDGRLHIEDYLDWERAIETFFEYMEINPEKQVKYVACRL 179

Query: 3976 RGRASAWWQQLKTMRSRQSKPKLTSWDKFKTKLRNEFLPFNYSRTLYQKFQQLRQGSRTI 3797
            +G ASAWW QL   R R+ +  + SW + K  LR  FLP +Y + LY K+Q   QGSR++
Sbjct: 180  KGGASAWWLQLLQSRRREGRGDVRSWFRMKQLLRGHFLPTDYEQMLYLKYQHCTQGSRSV 239

Query: 3796 DAYSDEFYQLLVRSDVRETDDQLVSRYIGGLRLQYQDVLNMFSPSSVSEAHQRAVLYEKQ 3617
            + Y++EFY+L  R++++E+++QLV+RY+GGL+   QD L + S  ++S+A   A+  E Q
Sbjct: 240  NDYTEEFYRLSARNNLQESENQLVARYVGGLKDPIQDKLELNSVWTLSQAVNFALKAELQ 299

Query: 3616 LLRRS-------PFPLPSSGNHFDRSPTGSQIKPAPTLPSGSRAQGD----LGFLXXXXX 3470
            + R S         PL  +       P   + +P  + PS S    +       L     
Sbjct: 300  MQRHSRSFSQRRSMPLEVNSEVSKHHPQPGKFQPNAS-PSSSHNSAENRAAAAKLKGPVK 358

Query: 3469 XXXXXXXXXXRCFNCGDPSHLQSACPKRASTRALYVDDVCDADFSSSPVYDDDIS-AQPP 3293
                      +CF C  P H  + CP R   + L      D         +D ++  +  
Sbjct: 359  ENPYSRPTTLKCFRCFQPGHKSNECPNRQQIQML------DGSHGEDGGVNDHLTDGEDY 412

Query: 3292 EEFLHGDVGQ--LLVLQRVCLTPRREDDDSMQRHKLFESTCTVQGKICRFIIDSGSCENV 3119
             E L GD G+  + +L+++ L PR+      QR+ +F + CT+QGK+C  +IDSG  ENV
Sbjct: 413  AEDLQGDEGEPIICILEKLLLAPRQPQQS--QRNAIFRTKCTIQGKVCELLIDSGCTENV 470

Query: 3118 VAADAIQKLNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVWCDVVPMDA 2939
            ++   +Q L L T   P PY ++W++R  EITV     +TFS+G  Y   V CDV+ MD 
Sbjct: 471  ISRSVVQALQLKTTKKPQPYKISWVKRGVEITVAESCRVTFSLGKHYVCEVMCDVLEMDV 530

Query: 2938 CHLLLGRPWQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXPTDAHPRVLSISYSAFA 2759
            CHL+LGRPWQ+D   IHD R N YSF + G K+ LL                ++S   FA
Sbjct: 531  CHLILGRPWQFDTQAIHDCRSNIYSFDWKGKKLRLLPQTTNGGDKTNGGNKTAVS-PEFA 589

Query: 2758 RAMDASSFVLL-----------LVSRDVSESPN---VPSVVAPLLSEFADIFPDELPPGL 2621
             A   S  +LL           LV+ D S   N   +P  V  LLSEF+DI P ELP  L
Sbjct: 590  AAYIVSGPMLLQEADNKVPLLALVTVDESTVANKQVLPEAVQQLLSEFSDIGPHELPAEL 649

Query: 2620 PPLRMIQHQIDFIPGAKLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPALL 2441
            PPLR IQHQID IPGA LPN P+YRMSP EH  L+  +++LL R  I+ SLSPCAVPALL
Sbjct: 650  PPLRNIQHQIDLIPGATLPNLPYYRMSPKEHLILQEIVDDLLKRQLIQNSLSPCAVPALL 709

Query: 2440 IPKKDGAWRMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRP 2261
            +PKKDG WRMC+DSRA+NKIT ++ FP+PR+ DLLD+L GA +FSKLDL+SGYHQ+RIRP
Sbjct: 710  VPKKDGQWRMCIDSRAINKITTKFRFPVPRVSDLLDKLHGAAIFSKLDLRSGYHQVRIRP 769

Query: 2260 GDEWKTAFKTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKS 2081
            GDEWK+AFKTREGLFEW VMPFGL NAPSTFMR+M++ L+P  G   V YFDDILVYS S
Sbjct: 770  GDEWKSAFKTREGLFEWKVMPFGLCNAPSTFMRLMSEVLQPFAGKFCVSYFDDILVYSNS 829

Query: 2080 VHDHLAHLRAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWP 1901
            + DH+ HL  +   LR    Y    KC F T  V FLG+ VS  GI VD  K++A+++WP
Sbjct: 830  LEDHILHLTRLFQTLRNSKLYLNLPKCEFATTQVYFLGFVVSREGIQVDPRKVSAVREWP 889

Query: 1900 VPTTLTEVRSFHGLASFYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKLTH 1721
            VP +L+++RSFHGLA+FYRRFI  FS IMAPITD++ G SF W T    +F +IK  L+ 
Sbjct: 890  VPKSLSDIRSFHGLANFYRRFIRGFSLIMAPITDVLKGHSFIWSTTQQQSFENIKKALSS 949

Query: 1720 APLLALPDFSVPFELHSDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAVV 1541
            AP+LALP+F  PF++ +DAS +GIGAVL Q   P+ YFSEKL+ +R +++ Y+ E YAVV
Sbjct: 950  APILALPNFEKPFQVDTDASGIGIGAVLYQEDRPLEYFSEKLSTSRQKWTVYEQELYAVV 1009

Query: 1540 RAIRHWRHYLFHREFILYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITNK 1361
            RA++ W HYL H++F+L +DH++L+++NSQ +++  HA W  FLQ+F+FV++H++G  N+
Sbjct: 1010 RALKQWEHYLLHQDFVLCSDHQSLQYLNSQKTINRMHARWVIFLQRFSFVIRHKTGKMNR 1069

Query: 1360 VADALSRRHSLLVDMRIEVPGFDSFRELYATDSFFKIILSSLARG-DASDFILHDGFLFK 1184
            VADALSRR +LLV ++ EV G +  + LY TD  F I  +S   G   +DF L  GFLFK
Sbjct: 1070 VADALSRRAALLVQLQTEVTGLEEMKSLYDTDEDFAIPWASCNAGKPEADFSLRHGFLFK 1129

Query: 1183 GICLCVPMCSLRLRLVAELHSTG---HVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRIC 1013
            G  LCVP  S R +L+ E+H  G   HVGRD+++  ++ ++FWP L+RDV+R + RC  C
Sbjct: 1130 GNLLCVPASSWRHQLIREIHCNGLAAHVGRDKTVQQLQMRFFWPHLKRDVTRLIERCATC 1189

Query: 1012 QVSKGTSTNAGLYRPLPIPSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPC 833
            Q  KGT+ N GLY PLP+P   W  LS+DFVLGLPRT+RG DSI VVVDRFSKM HFIPC
Sbjct: 1190 QTYKGTAQNTGLYLPLPVPDSIWEDLSLDFVLGLPRTKRGSDSIMVVVDRFSKMAHFIPC 1249

Query: 832  KRSADAVHVAQLFFREVYRLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSAYHPQ 653
            K++ DA+++A+LFF+E+ RLHG+P S+ SDRD +F+SHFWR LW    T+L  SS YHPQ
Sbjct: 1250 KKTFDALNIAKLFFKEIVRLHGIPRSLTSDRDVKFISHFWRELWKKFQTDLKLSSTYHPQ 1309

Query: 652  TDGQTEVVNRSLGNLLRCLVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGFLPR 473
            TDGQTEVVNR+L  +LRCLV D P+ W+  L QAEFA N   NRSTG  PF VVY  +P 
Sbjct: 1310 TDGQTEVVNRTLAAMLRCLVQDNPKHWEEVLGQAEFAFNSMPNRSTGRCPFSVVYTKMPN 1369

Query: 472  APVDLLTLP--SRTREDRRATDFMADLCQVHAATRAKLVDTTAKYKRAADTHRRQLEFSV 299
              VDL  LP    T   + A  F   L +V    + ++ +T A+YK   D HRR +EF+ 
Sbjct: 1370 HLVDLAVLPKCKSTAAAQTANQFSEVLKEV----QERITETNAQYKSVKDQHRRHVEFTP 1425

Query: 298  GDYVWAVLTKDRYPAHDYHKLSARKIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCHLI 119
            G+ V     +DR+P+    KL+ +K GP  +L KIN NAY + LP  L+TS  FNV  + 
Sbjct: 1426 GELVMLRYRRDRFPSGPCPKLNPKKFGPFPVLRKINDNAYVIDLPKDLQTSSTFNVADIY 1485

Query: 118  PYHGENSFGDET 83
            PYH  +   + T
Sbjct: 1486 PYHPPDELQNTT 1497


>gb|PKU69610.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1278

 Score = 1239 bits (3207), Expect = 0.0
 Identities = 618/1265 (48%), Positives = 826/1265 (65%), Gaps = 5/1265 (0%)
 Frame = -1

Query: 3889 KTKLRNEFLPFNYSRTLYQKFQQLRQGSRTIDAYSDEFYQLLVRSDVRETDDQLVSRYIG 3710
            K +L+ ++L   Y + L+ + Q+L+Q   T++ Y  EF QLL++ D+ E  +  ++R+I 
Sbjct: 2    KKELQRKYLTDQYRQELFLRLQRLQQHQLTVEEYVAEFEQLLLKCDLAEPPENTIARFIE 61

Query: 3709 GLRLQYQDVLNMFSPSSVSEAHQRAVLYEKQLLRRSPFPLPSSGNHFDRS--PTGSQIKP 3536
            GL+     V+ + S  ++ +    ++  EKQ     PF L +     +++   + S I  
Sbjct: 62   GLQPAIAHVVQLQSYWTLQDVINLSIKVEKQQRNSKPFHLRAREGGAEKAFQTSRSAIGG 121

Query: 3535 APTLPSGSRAQGDLGFLXXXXXXXXXXXXXXXRCFNCGDPSHLQSACPKRASTRALYVDD 3356
            A T   G+ A                      +CF C    H+ S CP R     +  D+
Sbjct: 122  AATSSMGNTADKRTS----QGPPPQTIGTAARKCFKCHGFGHIASNCPTRRVVTLIEEDE 177

Query: 3355 VCDADFSSSPVYDDDISAQPPEEFLHGDVGQLLVLQRVCLTPRREDDDSMQRHKLFESTC 3176
                D   + V + D + Q     +  D GQLLVL+R+    + E    +QRH LF++ C
Sbjct: 178  TV-LDTPVAHVSNPDNNPQSDHTAIGADEGQLLVLRRLLSAQKEEP---VQRHNLFKTRC 233

Query: 3175 TVQGKICRFIIDSGSCENVVAADAIQKLNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTF 2996
            T+QG++C+ I+DSGSCEN+ +   ++KL LSTE HP PY L+W+Q +N + V+RR L+ F
Sbjct: 234  TIQGRVCQVIVDSGSCENIASCTLVEKLQLSTEAHPKPYKLSWIQSENAVEVSRRCLVPF 293

Query: 2995 SIGGKYTDSVWCDVVPMDACHLLLGRPWQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXX 2816
            SIG K+ D VWCDV+PMDACHLLLGRPWQ+DRG IHDG  NTY+ + +G  + LL     
Sbjct: 294  SIG-KFKDQVWCDVLPMDACHLLLGRPWQFDRGTIHDGVANTYTLVQNGETIVLLPLAVG 352

Query: 2815 XXPTDAHPRVLSISYSAFARAMDASSFVLLLVSRDVSESPNVPSVVAPLLSEFADIFPDE 2636
                     +++      A   D     LLL+   ++        +  LL +F D++ +E
Sbjct: 353  QEGPSNDQFLINKKACQLA-IQDVQHCYLLLIKEVINGDTPPQPEIQQLLQDFQDVWVEE 411

Query: 2635 LPPGLPPLRMIQHQIDFIPGAKLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCA 2456
            LP GLPPLR IQH +D IPGA LPNRP YR+ P EHEELRRQIE+LL +G IR S+SPCA
Sbjct: 412  LPVGLPPLRDIQHAMDLIPGATLPNRPPYRLRPDEHEELRRQIEDLLAKGFIRPSVSPCA 471

Query: 2455 VPALLIPKKDGAWRMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQ 2276
            VPALL+PKKDG +RMC+DSRA+NKIT+RY FP+PR+DDL DQL GA +FSK+DL+SGYHQ
Sbjct: 472  VPALLVPKKDGTYRMCIDSRAVNKITIRYRFPMPRIDDLFDQLQGAVLFSKIDLRSGYHQ 531

Query: 2275 IRIRPGDEWKTAFKTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDIL 2096
            IR+R GDEWKTAFK R+GLFEW+VMPFGLSNAPSTFMR+MNQ  +  +G  V+VYFDDIL
Sbjct: 532  IRVREGDEWKTAFKVRDGLFEWMVMPFGLSNAPSTFMRLMNQIFQSYLGKFVIVYFDDIL 591

Query: 2095 VYSKSVHDHLAHLRAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAA 1916
            VYS     HL HLR V+ ILR +  Y  P KC FL   + FLG+ +SA GI VD  K+ A
Sbjct: 592  VYSPDFRSHLQHLRQVMEILRQQTLYCHPKKCQFLNHKIQFLGFVLSANGIEVDPEKVTA 651

Query: 1915 IQDWPVPTTLTEVRSFHGLASFYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIK 1736
            I  WPVP +LT+VR FHGLASFYRRFI +FST+ AP+T+L+   SF W   A  +F  +K
Sbjct: 652  IVSWPVPHSLTDVRRFHGLASFYRRFIANFSTVAAPMTELLKSDSFCWTKTAQNSFEQLK 711

Query: 1735 HKLTHAPLLALPDFSVPFELHSDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIE 1556
             K+T AP+L LPDF   F++  DAS VGIGAVLSQ G P+AYFSEKLN  R +YSTYD E
Sbjct: 712  EKMTTAPVLRLPDFHNVFQVDCDASNVGIGAVLSQEGQPVAYFSEKLNEARQKYSTYDKE 771

Query: 1555 FYAVVRAIRHWRHYLFHREFILYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQS 1376
            FYA+VRA+ HW HYL  REF+L+TDH ALK ++SQ  L  RHA WS  L  F FV+KH+S
Sbjct: 772  FYAIVRALHHWSHYLLCREFVLFTDHAALKFLDSQKKLRGRHATWSESLAAFQFVLKHKS 831

Query: 1375 GITNKVADALSRRHSLLVDMRIEVPGFDSFRELYATDSFFKIILSSLARGDASDFILHDG 1196
            G  N+VADALSRRH LL  ++ +V GF++ +E+YATD  F+ +           + + DG
Sbjct: 832  GKLNQVADALSRRHVLLQVLQSKVIGFENIKEMYATDVDFQGVWKLCQDSSHLQYHIKDG 891

Query: 1195 FLFKGICLCVPMCSLRLRLVAELHST---GHVGRDRSIDLVRRQYFWPTLRRDVSRFVAR 1025
            FLF   CLC+P  S+RL L++E H +   GH GRD+++ L++ +++WP + +DV+R+V  
Sbjct: 892  FLFFRTCLCIPRGSIRLVLISECHDSGMAGHFGRDKTLSLIKEKFYWPAIHKDVNRYVRG 951

Query: 1024 CRICQVSKGTSTNAGLYRPLPIPSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVH 845
            CRIC+ +K   TNAGLY PLP+PS PW  +SMDFVLGLP TQR  DSI VVVDRFSKM H
Sbjct: 952  CRICKRAKTPGTNAGLYLPLPVPSGPWEDVSMDFVLGLPHTQRNKDSIMVVVDRFSKMAH 1011

Query: 844  FIPCKRSADAVHVAQLFFREVYRLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSA 665
            F+ C ++ DA H+  L+FRE+ RLHG+P +I SDRD +FLSHFW++LW    T L FSS 
Sbjct: 1012 FVACNKTLDATHIGDLYFREIVRLHGIPKTITSDRDVKFLSHFWKTLWGKLGTRLQFSSV 1071

Query: 664  YHPQTDGQTEVVNRSLGNLLRCLVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYG 485
             HPQTDGQTE +NRSLGNLLRC VG   R WD+ L+Q EFA N ++N +TG SPF++VYG
Sbjct: 1072 AHPQTDGQTETINRSLGNLLRCFVGKNVRQWDLILAQVEFAFNRSINHTTGRSPFEIVYG 1131

Query: 484  FLPRAPVDLLTLPSRTREDRRATDFMADLCQVHAATRAKLVDTTAKYKRAADTHRRQLEF 305
              P +P+DL+ + + +           ++  +H   + ++    AKY+R A+ HR+ ++F
Sbjct: 1132 HNPLSPIDLIPIANVSAYSTDGEQRSVEIKNLHKQVQEEIARQNAKYQRQANKHRKFVQF 1191

Query: 304  SVGDYVWAVLTKDRYPAHDYHKLSARKIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCH 125
              GD VW  L K+R+P   + KL  +  GP  IL+KIN NAY++ LP     S VFNV  
Sbjct: 1192 KEGDLVWIRLRKERFPPGPFGKLKPKADGPFRILKKINDNAYQIDLPGDYNVSAVFNVAD 1251

Query: 124  LIPYH 110
            L P++
Sbjct: 1252 LTPHY 1256


>gb|PKU86533.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1544

 Score = 1235 bits (3195), Expect = 0.0
 Identities = 646/1384 (46%), Positives = 862/1384 (62%), Gaps = 41/1384 (2%)
 Frame = -1

Query: 4138 DSRRWEHSFKIDIPEFHGTLDADEFLDWMVSVDEILDFKDVPADRRVALVVTRLRGRASA 3959
            D    E   K+DIP F G L  +++LDW  SV+   D+ ++  +++V  V  RL+G ASA
Sbjct: 172  DRHHGEFRVKLDIPFFDGRLHIEDYLDWERSVENFFDYMEIEPEKQVKYVACRLKGGASA 231

Query: 3958 WWQQLKTMRSRQSKPKLTSWDKFKTKLRNEFLPFNYSRTLYQKFQQLRQGSRTIDAYSDE 3779
            WW QL   R R+ +  + SW + K  LR  FLP +Y + LY K+Q   QG+RT+  Y++E
Sbjct: 232  WWSQLLQCRRREGRGPVRSWVRMKQLLRGHFLPTDYEQMLYLKYQHCTQGNRTVSEYTEE 291

Query: 3778 FYQLLVRSDVRETDDQLVSRYIGGLRLQYQDVLNMFSPSSVSEAHQRAVLYEKQL----- 3614
            FY L  R+D+ ET +QLV+RYIGGLR   QD L + S  S+S+A   A+  E QL     
Sbjct: 292  FYSLSARNDLNETSNQLVARYIGGLRESIQDKLELNSVWSLSQAVNFALKAEIQLSRHMR 351

Query: 3613 ---------------------LRRSPFPLPSSGNHFDRSPTGSQIKPA-PTLPSGS---- 3512
                                 +R++P    +SG+     P      P  P  P+      
Sbjct: 352  GGSHRRQTVETVDLTKQPSPGVRKTPLLPDNSGSSQSPKPNSDPKAPLKPRFPAKDNPYP 411

Query: 3511 RAQGDLGFLXXXXXXXXXXXXXXXRCFNCGDPSHLQSACPKRASTRALYVDDVCDADFSS 3332
            R QG                    +CF C  P H  + CP R   + +  +D        
Sbjct: 412  RPQG-------------------LKCFRCFQPGHKSNECPNRQQLQIIEGED-------- 444

Query: 3331 SPVYDDDISAQPPEEFLHGDVGQLLV--LQRVCLTPRREDDDSMQRHKLFESTCTVQGKI 3158
               ++     +  E+ L GD G+ LV  L+++ L PR+  +   QRH +F++ CT+ GK+
Sbjct: 445  EEAFEQREEEEEVEDVL-GDEGEPLVCVLEKLLLAPRKAMES--QRHAIFKTKCTIAGKV 501

Query: 3157 CRFIIDSGSCENVVAADAIQKLNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKY 2978
            C  +IDSG  ENVV+   +Q L L T  HP PY ++W++R  EI VT    + FSIG  Y
Sbjct: 502  CDVLIDSGCTENVVSKAVVQALQLKTAKHPQPYKISWVKRGMEIAVTETCRVQFSIGKHY 561

Query: 2977 TDSVWCDVVPMDACHLLLGRPWQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXP--T 2804
            T  V CDVV MD CHL+LGRPWQ+D   I+DGR NTYS  + G ++ LL           
Sbjct: 562  TCEVVCDVVEMDVCHLILGRPWQFDVSAIYDGRANTYSLEWKGRRLRLLPHSAVGDSKTN 621

Query: 2803 DAHPRVLSISYSAFARAMDASSFVLLLVSRDVSESPNVPS--VVAPLLSEFADIFPDELP 2630
               P +  ++ +    A +    +  L+ R+ + S +  S  +V PLL +F +I    + 
Sbjct: 622  SVRPALHIVTGNGLLAACEKDKQIFALIIREATPSQDAESRRLVEPLLKQFEEILDGNVS 681

Query: 2629 PGLPPLRMIQHQIDFIPGAKLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVP 2450
              LPPLR +QHQIDF+PG+ LPN PH+R+SP EHE L++ +++LL    I+ SLSPCAVP
Sbjct: 682  T-LPPLRSLQHQIDFVPGSTLPNLPHHRLSPREHEILQQLVDDLLKNKLIQPSLSPCAVP 740

Query: 2449 ALLIPKKDGAWRMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIR 2270
            ALL+PKKDG+WRMC+DSRA+NKITV++ FP+PR+++LL++L GATVFSKLDL+SGYHQIR
Sbjct: 741  ALLVPKKDGSWRMCMDSRAINKITVKFRFPVPRIEELLEKLAGATVFSKLDLRSGYHQIR 800

Query: 2269 IRPGDEWKTAFKTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVY 2090
            IRPGDEWKTAFKTR GL+EW VMPFGL NAPSTFMR+M + L+P +    VVYFDDILV+
Sbjct: 801  IRPGDEWKTAFKTRHGLYEWRVMPFGLCNAPSTFMRLMTEVLKPFLNISCVVYFDDILVF 860

Query: 2089 SKSVHDHLAHLRAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQ 1910
            S SV DHL HL  + S+LR    +   SKC F    V FLG+ +SA G+ VD  K+ AI 
Sbjct: 861  SASVADHLVHLGEIFSVLRQNQLFLNSSKCEFAASTVYFLGFVISAAGVRVDQRKVEAIT 920

Query: 1909 DWPVPTTLTEVRSFHGLASFYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHK 1730
            +WP+P + TE+RSFHGLA+FYRRFI +FSTIMAPITD +  K F W    +++F +IK  
Sbjct: 921  NWPIPKSFTEIRSFHGLANFYRRFIKNFSTIMAPITDCLKLKHFQWGADQSSSFEEIKVA 980

Query: 1729 LTHAPLLALPDFSVPFELHSDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFY 1550
            L+ AP+LALP+F  PF + +DAS VGIGAVLSQ   P+ +FSEKL  +R  +S Y+ E Y
Sbjct: 981  LSSAPVLALPNFEKPFHVDTDASGVGIGAVLSQENRPVEFFSEKLCPSRQNWSVYEQELY 1040

Query: 1549 AVVRAIRHWRHYLFHREFILYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGI 1370
            AVVRA++ W  YL   EF+L +DH AL+ IN Q  ++  HA W  FLQ+F+FV+KH+SG 
Sbjct: 1041 AVVRALKQWEPYLLQHEFVLCSDHRALQFINKQKHINRMHARWILFLQRFSFVLKHKSGP 1100

Query: 1369 TNKVADALSRRHSLLVDMRIEVPGFDSFRELYATDSFFKIILSSLARGDA-SDFILHDGF 1193
             N VADALSRRH L+  ++ E+ G +  +ELY+TD  FK       +    S+F +  G+
Sbjct: 1101 QNVVADALSRRHLLITQLQTEIIGLECLKELYSTDPEFKAAWEDCQQDKPNSEFAIRHGY 1160

Query: 1192 LFKGICLCVPMCSLRLRLVAELHSTG---HVGRDRSIDLVRRQYFWPTLRRDVSRFVARC 1022
            LF    LC+P  S R +L+ E+HS G   HVGR  +   ++ +++WP L RDV RFV RC
Sbjct: 1161 LFHRNQLCIPDSSWRPQLIKEVHSGGLAAHVGRTNTYLQLQSRFYWPHLHRDVMRFVERC 1220

Query: 1021 RICQVSKGTSTNAGLYRPLPIPSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHF 842
             ICQ  K      GLY PLP P   W  LS+DFVLGLPRT+RGHDSI VVVDRFSKM HF
Sbjct: 1221 PICQSYKTGGQLGGLYLPLPTPETIWEDLSLDFVLGLPRTKRGHDSIMVVVDRFSKMAHF 1280

Query: 841  IPCKRSADAVHVAQLFFREVYRLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSAY 662
            +PCK++ DA++VA++FF E+ RLHGLP S+ SDRD +F+S FW+ LW   +T++  SSAY
Sbjct: 1281 LPCKKTFDALNVARIFFAEIVRLHGLPRSLTSDRDVKFVSSFWKELWKRLHTDIKLSSAY 1340

Query: 661  HPQTDGQTEVVNRSLGNLLRCLVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGF 482
            HPQTDGQTEV+NR+LGNLLRC+V D P+ WD  L QAEFA+N   NRSTG SPF +VY  
Sbjct: 1341 HPQTDGQTEVINRTLGNLLRCIVQDKPKQWDEVLGQAEFAYNSMTNRSTGRSPFGIVYTK 1400

Query: 481  LPRAPVDLLTLPSRTREDRRATDFMADLCQVHAATRAKLVDTTAKYKRAADTHRRQLEFS 302
             P   VD+  LP      R A +F     ++    R KL +++ KYK+  D  RRQ  F+
Sbjct: 1401 HPNHTVDIAVLPK--CNSRPAAEFAEHFTKMLEEVRDKLKESSTKYKQHFDKQRRQRSFA 1458

Query: 301  VGDYVWAVLTKDRYPAHDYHKLSARKIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCHL 122
             GD V   + ++R+P   Y KLSARKIGP  ++ +INPNAY + LP H   S  FN+  L
Sbjct: 1459 PGDLVMIKIRRERFPPGTYSKLSARKIGPYAVIRQINPNAYVVDLPKHYNISSTFNIGDL 1518

Query: 121  IPYH 110
              YH
Sbjct: 1519 AAYH 1522


>gb|PKU88110.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1459

 Score = 1233 bits (3190), Expect = 0.0
 Identities = 626/1376 (45%), Positives = 875/1376 (63%), Gaps = 27/1376 (1%)
 Frame = -1

Query: 4156 DNGKHDDSRRWEHSFKIDIPEFHGTLDADEFLDWMVSVDEILDFKDVPADRRVALVVTRL 3977
            + G+H      E   K+DIP F G L  +++LDW  SV+   ++ ++  DR+V  V  +L
Sbjct: 80   ERGRHHS----EFRVKLDIPFFEGKLHIEDYLDWERSVETFFEYMEIEPDRQVKYVACKL 135

Query: 3976 RGRASAWWQQLKTMRSRQSKPKLTSWDKFKTKLRNEFLPFNYSRTLYQKFQQLRQGSRTI 3797
            +G ASAWWQQ    R R+ K  + SW + K  LR++FLP ++ + LY ++Q  +QG RT+
Sbjct: 136  KGGASAWWQQTLQSRRREGKGTVKSWFRMKQLLRSQFLPIDFEQMLYVQYQHCKQGGRTV 195

Query: 3796 DAYSDEFYQLLVRSDVRETDDQLVSRYIGGLRLQYQDVLNMFSPSSVSEAHQRAVLYEKQ 3617
            + Y++EF++L  R+++ E+ +QLV+RYIGGLR   QD L + +  S+S+A   A+  E Q
Sbjct: 196  NEYTEEFHRLSARNNLNESANQLVARYIGGLRDTIQDKLELNAIWSLSQAINYAIKVEMQ 255

Query: 3616 LLR-------RSPFPLPSSGNHFDRSPTGSQIKP--APTLPSGSRAQGDLG-------FL 3485
              R       R      + G        G   KP   P  P    A    G         
Sbjct: 256  QSRHQANRSQRRSSEYHTEGGRTSTQYPGQSSKPLTTPKDPVPQAADSSKGPDNKQQPRN 315

Query: 3484 XXXXXXXXXXXXXXXRCFNCGDPSHLQSACPKRASTRALYVDDVCDADFSSSPVYDDDIS 3305
                           +CF C    H  + CP R   + L  ++  D + +     +D ++
Sbjct: 316  RAPVRDNPYAKNPNIKCFRCFQQGHKSNECPTRPQLQLLEGEEEEDWECTGEEELEDVVA 375

Query: 3304 AQPPEEFLHGDVGQ--LLVLQRVCLTPRREDDDSMQRHKLFESTCTVQGKICRFIIDSGS 3131
                      D G+  + VLQ++ L PR+  +   QR+ LF++ CT+QGK+C  ++DSG 
Sbjct: 376  ----------DEGEPVICVLQKLLLAPRQTPNS--QRNALFKTKCTIQGKVCDLLVDSGC 423

Query: 3130 CENVVAADAIQKLNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVWCDVV 2951
             ENV++   +Q L L T  +P+PY ++W++R  E+ VT    + FSIG  Y   V CDV+
Sbjct: 424  TENVISRAVVQALQLKTSKNPSPYKISWVKRGVELAVTDLCKVAFSIGRHYAGEVLCDVI 483

Query: 2950 PMDACHLLLGRPWQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXPTDAHPRVLSISY 2771
             MD CHL+LGRPWQ+D G  +D R NTYSF + G K+ LL        +  + +      
Sbjct: 484  DMDVCHLILGRPWQFDVGTTYDCRANTYSFDWKGKKLRLLPRTSDPEVSKPNTKTALTVV 543

Query: 2770 SAFA-----RAMDASSFVLLLVSRDVSESPNVPSVVAPLLSEFADIFPDELPPGLPPLRM 2606
            +A       R      F+++      +E   +P  V+ LL +FAD+ P ELP  LPP+R 
Sbjct: 544  TAKTMLNLWRENHQMLFLIVQEPNHHTELSELPPEVSKLLQQFADVCPPELPNELPPMRA 603

Query: 2605 IQHQIDFIPGAKLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPALLIPKKD 2426
            +QHQI+ +PGA LPN PHY+MSP+EH+ L++ +++LL +  I+ S+SPCAVPALL+PKKD
Sbjct: 604  VQHQIELLPGASLPNVPHYKMSPNEHQALQQIVDDLLSKNLIQPSVSPCAVPALLVPKKD 663

Query: 2425 GAWRMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWK 2246
            G WRMC+DSR++N+ITV++ FP+PR++D+LD++ GAT+FSKLDL+SGYHQIRIR GDEWK
Sbjct: 664  GTWRMCMDSRSINRITVKFRFPMPRIEDMLDRVAGATIFSKLDLRSGYHQIRIRSGDEWK 723

Query: 2245 TAFKTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHL 2066
            TAFKTR+GL+EW VMPFGL NAP+TFMR+MN+ L+P +  C VVYFDDIL++S +  DHL
Sbjct: 724  TAFKTRQGLYEWKVMPFGLCNAPATFMRLMNEVLKPFLNICCVVYFDDILLFSANREDHL 783

Query: 2065 AHLRAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTL 1886
             HL+ +L+ LRT   Y    KC F T  V FLG+ +SA GI VD  K+ AIQ+WP+P  L
Sbjct: 784  QHLKNLLATLRTNKLYLNLPKCQFATTEVGFLGFIISAEGIRVDPKKVTAIQEWPIPQCL 843

Query: 1885 TEVRSFHGLASFYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKLTHAPLLA 1706
            T++RSFHGLA+FYR+FI  FS+IMAPITD++    F W  +   +F  IK  LT AP+L 
Sbjct: 844  TDIRSFHGLANFYRKFIRGFSSIMAPITDVLKRPQFLWTEEQQQSFNAIKLALTTAPVLI 903

Query: 1705 LPDFSVPFELHSDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAVVRAIRH 1526
            LPDFS PF + +DAS +GIGAVLSQ   P+ +FSEKL+ +R +++ Y+ E YA+VRA++ 
Sbjct: 904  LPDFSKPFTVDTDASTIGIGAVLSQGQKPVEFFSEKLSPSRQKWTVYEQELYAIVRALKQ 963

Query: 1525 WRHYLFHREFILYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITNKVADAL 1346
            W HYL H++F++ +DH+AL++INSQ +++  HA W  FLQ+FTFV++H+SG  N VADAL
Sbjct: 964  WEHYLLHQDFVIRSDHKALQYINSQKNINRMHARWIIFLQRFTFVIQHKSGAQNTVADAL 1023

Query: 1345 SRRHSLLVDMRIEVPGFDSFRELYATDSFFKIILSSLARGD-ASDFILHDGFLFKGICLC 1169
            SRR   +  ++ E  G  S  ELY  D +FK   +     +  +D+ +  GFLFKG  LC
Sbjct: 1024 SRRALTITQLQTEFNGLASLIELYPEDEYFKGPWAKCCNHEPVADYSIRHGFLFKGHLLC 1083

Query: 1168 VPMCSLRLRLVAELHSTG---HVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRICQVSKG 998
            VP  S R   + E H+ G   H+GRD +I  +++++FWP LRRDVS+FV RC ICQ  KG
Sbjct: 1084 VPSSSWRQHFIKETHAGGLAAHMGRDNTIAQLQQRFFWPHLRRDVSKFVERCSICQSYKG 1143

Query: 997  TSTNAGLYRPLPIPSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPCKRSAD 818
               N GLY+PLP+P+  W  LS+DF+LGLPRT+ G+DSI VVVDRFSKM HFI CK++ D
Sbjct: 1144 GGQNTGLYQPLPVPASIWEDLSLDFILGLPRTKHGNDSIMVVVDRFSKMAHFIACKKTFD 1203

Query: 817  AVHVAQLFFREVYRLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSAYHPQTDGQT 638
            A+++A+LFF+E+ RLHG+P S+ SDRD +F+SHFWR LW   +T++  SS+YHPQTDGQT
Sbjct: 1204 ALNIAKLFFKEIVRLHGIPRSLTSDRDVKFISHFWRELWKRLHTQVQLSSSYHPQTDGQT 1263

Query: 637  EVVNRSLGNLLRCLVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGFLPRAPVDL 458
            EVVNR+LGNLLRCLV + P+ WD  LS AEFA N  +NRSTG+ PF +VY   P   +D+
Sbjct: 1264 EVVNRTLGNLLRCLVQENPKLWDELLSHAEFAFNSMINRSTGMCPFSIVYTKTPNTVLDI 1323

Query: 457  LTLPSRTREDRRATDFMADLCQVHAATRAKLVDTTAKYKRAADTHRRQLEFSVGDYVWAV 278
              LP+   + + A   + +  +  +  R KL +T +KYK  AD HRR+  F  GD V   
Sbjct: 1324 AALPN--CKSKSAASLVENYAEFLSNIRLKLQETNSKYKLDADVHRREKLFQPGDLVLVR 1381

Query: 277  LTKDRYPAHDYHKLSARKIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCHLIPYH 110
            + ++R P   Y KL  +K GP  I+ KIN NAY + LP    TS  FNV  +  YH
Sbjct: 1382 MKRERLPVGAYSKLGKKKWGPFPIISKINDNAYTVELPADFNTSRTFNVNDIYEYH 1437


>ref|XP_021991836.1| uncharacterized protein LOC110888626 [Helianthus annuus]
          Length = 1098

 Score = 1232 bits (3187), Expect = 0.0
 Identities = 599/1066 (56%), Positives = 766/1066 (71%), Gaps = 15/1066 (1%)
 Frame = -1

Query: 4198 NPFAQFAHKDDL-----RGDNGKHDDSRRWEHSFKIDIPEFHG-TLDADEFLDWMVSVDE 4037
            NPF   +  +D      RG+ G  D +RRWE   +  IPEF G TL+ + F+DW+  V+E
Sbjct: 40   NPFGDDSTSEDEQEGQPRGERG--DGNRRWEAGMRTSIPEFDGDTLNPENFIDWLAVVEE 97

Query: 4036 ILDFKDVPADRRVALVVTRLRGRASAWWQQLKTMRSRQSKPKLTSWDKFKTKLRNEFLPF 3857
            + +FK+VP D+RV L+ TRLRGRASAWW+QLK  R R  K K+T+W K K  +R  F+P 
Sbjct: 98   VFEFKEVPEDKRVPLIATRLRGRASAWWKQLKLSRERMGKSKVTTWRKMKKCMRANFIPH 157

Query: 3856 NYSRTLYQKFQQLRQGSRTIDAYSDEFYQLLVRSDVRETDDQLVSRYIGGLRLQYQDVLN 3677
            NY R +YQ+ Q L+QGS+T++ Y+ EFYQL+ R+D++ET+DQLVS YIGGLRL   + +N
Sbjct: 158  NYQRLMYQRLQNLKQGSKTVEDYTTEFYQLVARNDIQETEDQLVSHYIGGLRLAIMESVN 217

Query: 3676 MFSPSSVSEAHQRAVLYEKQLLRRSPFPLPSS--GNHFDRSPTGSQIKPAPTLPSGSRAQ 3503
            +F P ++S+AHQRA+++EKQ  RRS     S+  G         S+  P    P G  A 
Sbjct: 218  LFDPLTISDAHQRALVFEKQT-RRSGGSASSALTGGSSGSGNVASRFVPNQAKPGGGAAG 276

Query: 3502 GDLGFLXXXXXXXXXXXXXXXRCFNCGDPSHLQSACPKRASTRALYV-------DDVCDA 3344
                                 +CFNCG+  H Q+ C K+A  R LY        DD    
Sbjct: 277  SS----------SKGAGTSNMKCFNCGETGHRQAEC-KKAGKRHLYNEPDGWEDDDEVGE 325

Query: 3343 DFSSSPVYDDDISAQPPEEFLHGDVGQLLVLQRVCLTPRREDDDSMQRHKLFESTCTVQG 3164
             +   PVYD++   +  EE + GDVG  LV++R C TP+  DDD + +H +F STCTV G
Sbjct: 326  TYEDGPVYDEEPKYE--EEEVAGDVGLSLVVRRSCYTPKASDDDWL-KHNIFHSTCTVWG 382

Query: 3163 KICRFIIDSGSCENVVAADAIQKLNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGG 2984
            K+C F+IDSGSC+N+V+ +A++KL L TE H  PY L WL++  E+ V++R L+ FS+G 
Sbjct: 383  KVCTFVIDSGSCDNLVSEEAVRKLGLKTENHRKPYKLQWLKKGGEVQVSKRTLVAFSVGK 442

Query: 2983 KYTDSVWCDVVPMDACHLLLGRPWQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXPT 2804
             Y D VWCDVVPMDACHLLLGRPW+YDR V H+GR NTYSF+F  VK+TLL         
Sbjct: 443  TYKDDVWCDVVPMDACHLLLGRPWEYDRCVEHNGRSNTYSFMFDNVKITLLPNKPKEVA- 501

Query: 2803 DAHPRVLSISYSAFARAMDASSFVLLLVSRDVSESPNVPSVVAPLLSEFADIFPDELPPG 2624
             A P    ++ S F   ++    V +L+ ++V +  N+P  + PLL EF+D+FP+ELP G
Sbjct: 502  -AKPTGTLLTLSQFENELEVGDDVFVLIGKEVVDGVNIPEAMVPLLEEFSDVFPNELPDG 560

Query: 2623 LPPLRMIQHQIDFIPGAKLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPAL 2444
            LPPL  IQH ID   G++LPNRPHYRMSP EHEELRRQ+EEL+ +GH+RES+SPCAVPAL
Sbjct: 561  LPPLHDIQHHIDLELGSQLPNRPHYRMSPGEHEELRRQVEELISKGHVRESMSPCAVPAL 620

Query: 2443 LIPKKDGAWRMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIR 2264
            L PKKDG WRMCVDSRA+NKITVRY FPIPRLDDLLDQ+ GAT+F+KLDLKSGY+QIR+R
Sbjct: 621  LTPKKDGTWRMCVDSRAINKITVRYRFPIPRLDDLLDQISGATIFTKLDLKSGYYQIRLR 680

Query: 2263 PGDEWKTAFKTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSK 2084
            PGDEWKTAFKTREGL+EWLVMPFGL NAPSTFMR+MNQ LRP IG  VVVYFDDIL+YS 
Sbjct: 681  PGDEWKTAFKTREGLYEWLVMPFGLLNAPSTFMRVMNQLLRPFIGKFVVVYFDDILIYSA 740

Query: 2083 SVHDHLAHLRAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDW 1904
            S  DH+ H++ VL++LR + FYA+  KCVF+T  VLFLGY VS  GI VD++K+AA+Q+W
Sbjct: 741  SFSDHVGHVKQVLALLRRDRFYASTKKCVFMTPKVLFLGYVVSGDGIQVDESKVAAVQNW 800

Query: 1903 PVPTTLTEVRSFHGLASFYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKLT 1724
            P PTT+TEV SFHGLASFYRRFIPHFS+IMAP+TD + GK+F W  +A  AF  +K KLT
Sbjct: 801  PTPTTITEVHSFHGLASFYRRFIPHFSSIMAPVTDCIKGKTFVWTVEADLAFQVVKKKLT 860

Query: 1723 HAPLLALPDFSVPFELHSDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAV 1544
             AP+L LPDFS  FEL +DASKVGIG VLSQ G P+AYFSEKL   + RYSTYD+EFYAV
Sbjct: 861  TAPILVLPDFSQVFELRTDASKVGIGGVLSQGGRPVAYFSEKLTGPKLRYSTYDLEFYAV 920

Query: 1543 VRAIRHWRHYLFHREFILYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITN 1364
            V+A++HWRHYLF +EF+L+TDH++L HI  QD +S +H  W  FL++FT VVKH++G++N
Sbjct: 921  VQAVKHWRHYLFQKEFVLFTDHDSLWHIRIQDKVSHKHGRWLDFLEKFTLVVKHKNGVSN 980

Query: 1363 KVADALSRRHSLLVDMRIEVPGFDSFRELYATDSFFKIILSSLARGDASDFILHDGFLFK 1184
            KVADALSRR +LLV MR++VPG +  RE  A D +F +IL  +     SDF+LHDGFLFK
Sbjct: 981  KVADALSRRSNLLVSMRVDVPGLEVIREQLAIDPYFSVILQDVETEKKSDFLLHDGFLFK 1040

Query: 1183 GICLCVPMCSLRLRLVAELHSTGHVGRDRSIDLVRRQYFWPTLRRD 1046
            G  LC+P  SLRL+++ ELH  GHVGRDR++ LV+  Y+WPT++ +
Sbjct: 1041 GNQLCIPDSSLRLQIIKELHGEGHVGRDRTLQLVKASYYWPTMKTE 1086


>gb|PKU68398.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1277

 Score = 1231 bits (3184), Expect = 0.0
 Identities = 619/1289 (48%), Positives = 837/1289 (64%), Gaps = 17/1289 (1%)
 Frame = -1

Query: 3928 RQSKPKLTSWDKFKTKLRNEFLPFNYSRTLYQKFQQLRQGSRTIDAYSDEFYQLLVRSDV 3749
            R+ + K+TSWDK K +L+ ++LP  Y + L+ K  +L+Q  RT++ Y  EF QL ++ D+
Sbjct: 2    REGRSKITSWDKMKKELQRKYLPDYYRQDLFLKLHRLQQQQRTVEEYVAEFEQLSLKCDL 61

Query: 3748 RETDDQLVSRYIGGLRLQYQDVLNMFSPSSVSEAHQRAVLYEKQLLRRSPF--PLPSSGN 3575
             E  +  ++R+I GL+    +++ +    ++ +    A+  EKQ     PF   L  SG 
Sbjct: 62   NEPHENTIARFIEGLQPSIANIVQLQPYWTLQDVVNLALKVEKQQKGPKPFYHKLRDSGA 121

Query: 3574 HFDRSPT-------GSQIKPAPTLPSGSRAQGDLGFLXXXXXXXXXXXXXXXRCFNCGDP 3416
                 PT        + ++  PT+   +     +                  +CF C   
Sbjct: 122  EGSSKPTRRTEGGASTSVENHPTMSRPTPVNQGVS---------------ARKCFKCHGF 166

Query: 3415 SHLQSACPKRASTRALYVDDVCDADFSSSPVYDDDI--SAQPPEE--FLHGDVGQLLVLQ 3248
             H+ S CP R   R + + +  D +  ++   +D++  ++QPP     +  D G LLVL+
Sbjct: 167  GHIASNCPTR---RTITLIEEEDREVDNTVPIEDNLHDASQPPSNPTVIAADEGPLLVLR 223

Query: 3247 RVCLTPRREDDDSMQRHKLFESTCTVQGKICRFIIDSGSCENVVAADAIQKLNLSTEPHP 3068
            +V    + E     QRH LF + CT+Q ++C+ IIDSGSCEN+ +A  ++KL L T  HP
Sbjct: 224  KVLSIQKGEP---AQRHNLFRTRCTIQDRVCQVIIDSGSCENIASATLVEKLQLPTILHP 280

Query: 3067 TPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVWCDVVPMDACHLLLGRPWQYDRGVIH 2888
             PY L+W++RDNE+ V+RR L+ FSIG K+ D  WCDV+PMDACHLLLGRPWQYDR  +H
Sbjct: 281  KPYKLSWVRRDNELEVSRRCLVNFSIG-KFQDQAWCDVIPMDACHLLLGRPWQYDRKTVH 339

Query: 2887 DGRQNTYSFLFHGVKVTLLXXXXXXXPTDAHPRVLSISYSAFARAMDASSFVLLLVSRDV 2708
            DG  NTYS +  G  + LL         D     L IS +    A+  +S   L++ ++V
Sbjct: 340  DGASNTYSLMQAGEPIILLPLATSQD--DMATDQLVISRAECHLAIQETSHCYLVLLKEV 397

Query: 2707 SESPNV-PSVVAPLLSEFADIFPDELPPGLPPLRMIQHQIDFIPGAKLPNRPHYRMSPSE 2531
             +     P  V PL++EF +IF +ELP GLPP R IQH +D +PG  LPNRP YR+ P E
Sbjct: 398  GDDICFHPLEVQPLIAEFQEIFVNELPAGLPPSRDIQHVVDLVPGVTLPNRPPYRLRPEE 457

Query: 2530 HEELRRQIEELLHRGHIRESLSPCAVPALLIPKKDGAWRMCVDSRALNKITVRYSFPIPR 2351
            HEEL++Q+E LL +G IR S+SPCAVP+LL+PKKDG +RMC+DSRA+NKIT+RY FPIPR
Sbjct: 458  HEELKQQVEGLLAQGFIRPSVSPCAVPSLLVPKKDGTYRMCIDSRAVNKITIRYRFPIPR 517

Query: 2350 LDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAFKTREGLFEWLVMPFGLSNAPST 2171
            +DDL DQL GAT+FSK+DL+SGYHQIRIR GDEWKTAFK R+GLFEWLVMPFGLSNAPST
Sbjct: 518  IDDLFDQLQGATIFSKIDLRSGYHQIRIREGDEWKTAFKVRDGLFEWLVMPFGLSNAPST 577

Query: 2170 FMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHLRAVLSILRTECFYAAPSKCVFL 1991
            FMR+MNQ  +P +   V++YFDDILVYS   H HL HLR V  +L+ +  Y  P KC FL
Sbjct: 578  FMRLMNQIFQPFLCKFVIIYFDDILVYSSDCHSHLQHLRQVFQVLKEQRLYCHPQKCHFL 637

Query: 1990 TENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEVRSFHGLASFYRRFIPHFSTIMA 1811
             + + FLG+ +S  GI VD  KI AI  WP P + T+VR FHGLASFYRRFI +FST+ A
Sbjct: 638  GKRIKFLGFILSVAGIEVDPEKIEAIVSWPTPQSFTDVRRFHGLASFYRRFIQNFSTLAA 697

Query: 1810 PITDLMHGKSFSWPTQAATAFTDIKHKLTHAPLLALPDFSVPFELHSDASKVGIGAVLSQ 1631
            P+T+L+    F W  +A  +F  +K K+T  P+L LPDF+  F++  DAS VGIGAVLSQ
Sbjct: 698  PLTELLKTDKFLWTKEAEFSFEHLKEKVTTTPVLRLPDFNKLFQVDCDASNVGIGAVLSQ 757

Query: 1630 HGHPIAYFSEKLNATRGRYSTYDIEFYAVVRAIRHWRHYLFHREFILYTDHEALKHINSQ 1451
               P+AYFSEKLN +R +YSTYD EFYA+VRA+ HW HYL  +EFIL+TDH ALK +NSQ
Sbjct: 758  EDQPVAYFSEKLNDSRQKYSTYDKEFYAIVRALHHWSHYLLSKEFILFTDHAALKFLNSQ 817

Query: 1450 DSLSARHAAWSAFLQQFTFVVKHQSGITNKVADALSRRHSLLVDMRIEVPGFDSFRELYA 1271
              L  RHA W+  L  F FV+KH+SG  N+VADALSRRH L+ +++ ++ GFD  RE+YA
Sbjct: 818  KKLRGRHAMWAESLAAFHFVLKHKSGKQNQVADALSRRHVLVQEIQAKLTGFDYIREMYA 877

Query: 1270 TDSFFKIILSSLARGDASDFILHDGFLFKGICLCVPMCSLRLRLVAELHS---TGHVGRD 1100
             D  F+ I           + + DGFLF   C+CVP  S+R+ L++E H     GH GRD
Sbjct: 878  EDVDFRDIWEKCQSQAYQFYQIRDGFLFFHNCICVPRGSIRIALISECHDGGLAGHFGRD 937

Query: 1099 RSIDLVRRQYFWPTLRRDVSRFVARCRICQVSKGTSTNAGLYRPLPIPSQPWGALSMDFV 920
            +++ LV+ +++WP + +DV R+V  CRIC+ +K T TNAGLY PLP+P  PW  +SMDFV
Sbjct: 938  KTLALVKEKFYWPAMPKDVGRYVKGCRICRQAKTTGTNAGLYLPLPVPQNPWEDVSMDFV 997

Query: 919  LGLPRTQRGHDSIFVVVDRFSKMVHFIPCKRSADAVHVAQLFFREVYRLHGLPVSIVSDR 740
            LGLPRTQR  DSI VVVDRFSKM HF+ C ++ DA H+  L+F+E+ RLHG+P +I SDR
Sbjct: 998  LGLPRTQRNKDSIMVVVDRFSKMAHFVACNKTLDATHIGDLYFQEIVRLHGIPKTITSDR 1057

Query: 739  DTRFLSHFWRSLWSMANTELHFSSAYHPQTDGQTEVVNRSLGNLLRCLVGDTPRAWDIKL 560
            D +FLSHFW++LW    T L FSS  HPQTDGQTE VNRSLGNLLRC VG   R WD+ L
Sbjct: 1058 DVKFLSHFWKTLWGKLGTRLQFSSVAHPQTDGQTENVNRSLGNLLRCFVGKNLRQWDLIL 1117

Query: 559  SQAEFAHNLALNRSTGLSPFQVVYGFLPRAPVDLLTLPSRTREDRRATDFMADLCQVHAA 380
             Q EFA N + N +T  SPF++VYG  P  P+DL+ + + +           ++ ++H  
Sbjct: 1118 GQVEFAFNRSPNNTTRRSPFEIVYGSNPLTPLDLIPILNSSSYSLDGEQRSIEIKELHKQ 1177

Query: 379  TRAKLVDTTAKYKRAADTHRRQLEFSVGDYVWAVLTKDRYPAHDYHKLSARKIGPVEILE 200
             +A+++   +KY+  A+ HR+ ++F+ GD VW  L K+R+P   + KL  +  GP  +++
Sbjct: 1178 VQAEIIKQNSKYQTRANKHRKSVQFNEGDLVWIRLRKERFPPGSFGKLKPKAEGPFRVIK 1237

Query: 199  KINPNAYRLRLPNHLRTSDVFNVCHLIPY 113
            KIN NAY++ LP     S VFNV  L P+
Sbjct: 1238 KINDNAYQIDLPGDYNVSAVFNVADLTPH 1266


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score = 1224 bits (3168), Expect = 0.0
 Identities = 639/1388 (46%), Positives = 872/1388 (62%), Gaps = 26/1388 (1%)
 Frame = -1

Query: 4123 EHSFKIDIPEFHGTLDADEFLDWMVSVDEILDFKDVPADRRVALVVTRLRGRASAWWQQL 3944
            +   K++IPEF G+L+ D+ L+W+  V++I ++K+    +   + V +L+G AS W+  L
Sbjct: 87   DRHIKVEIPEFSGSLNPDDLLEWIRDVEKIFEYKNYNDVKACKVAVLKLKGYASLWYDNL 146

Query: 3943 KTMRSRQSKPKLTSWDKFKTKLRNEFLPFNYSRTLYQKFQQLRQGSRTIDAYSDEFYQLL 3764
            K  R ++ K  L SW K K K+  +F+  +Y++ L+ K   L+Q  +T++AY  EF QL 
Sbjct: 147  KHQRLKEGKDPLRSWSKLKKKMLAKFVTKDYTQDLFIKLSNLKQKEKTVEAYLREFEQLT 206

Query: 3763 VRSDVRETDDQLVSRYIGGLRLQYQDVLNMFSPSSVSEAHQRAVLYEKQLLRRSPFPLPS 3584
            ++ ++ E  +Q ++R++ GL       + M    S  +    ++  EK    +   P+ +
Sbjct: 207  LQCEINEKSEQRIARFLEGLDKNIAAEVRMQPLWSYDDVVNLSLRVEKMGKTK---PVAT 263

Query: 3583 SGNHFDRSPTGSQIKPAPTLPSGSRAQGDLGFLXXXXXXXXXXXXXXXRCFNCGDPSHLQ 3404
                  R  +  +I   P     S    D G                 +CF C    H +
Sbjct: 264  RPKPVFRPYSSVKINDPPKTTPQSTV--DKGKAPMNPKINPPLSRDKIKCFQCQGFGHFR 321

Query: 3403 SACPKRASTRALYVDDVCDADFSSSPVYDDDIS-----------AQPPEEFLHGDVGQLL 3257
              CP   S R L   +V + +      Y++D +             P +   H D G  L
Sbjct: 322  KDCP---SARTLTAIEVAEWEREGLVEYEEDEALVLEEVESEKETSPDQIVAHPDTGHSL 378

Query: 3256 VLQRVCLTPRREDDDSMQRHKLFESTCTVQGKICRFIIDSGSCENVVAADAIQKLNLSTE 3077
             L RV +  ++   ++ QR  +F S CTVQG++C  II+ GSC NV +   + KL L T+
Sbjct: 379  FLWRV-MHSQQAPLEADQRSMIFRSRCTVQGRVCNLIINGGSCTNVASTTMVSKLGLPTQ 437

Query: 3076 PHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVWCDVV-PMDACHLLLGRPWQYDR 2900
             HP PY L WL +D+ + V ++ +++FSIG  Y D V CDVV PMDACHLLLGRPW+YDR
Sbjct: 438  EHPNPYKLRWLSKDSGVRVDKQCIISFSIGKMYKDEVLCDVVVPMDACHLLLGRPWEYDR 497

Query: 2899 GVIHDGRQNTYSFLFHGVKVTL--LXXXXXXXPTDAHPR----VLSISYSAFARAMDASS 2738
               H G+ N Y F   G KVTL  L        +   P     VL +S +A  + +  + 
Sbjct: 498  NTTHQGKDNVYIFKHQGKKVTLTPLPPNQRDYGSPNVPEEMSGVLFLSEAAMIKEIRQAQ 557

Query: 2737 FVLLLVSRDVSESPN--VPSVVAPLLSEFADIFPDELPPGLPPLRMIQHQIDFIPGAKLP 2564
             VL+L+SR+V++  N  VP+ VAPL+  F ++FPDELP GLPPLR I+H ID +PG+ LP
Sbjct: 558  PVLMLLSREVNQEENTVVPTAVAPLIQRFQEVFPDELPSGLPPLRGIEHHIDLVPGSVLP 617

Query: 2563 NRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPALLIPKKDGAWRMCVDSRALNK 2384
            N+P YR  P+  +EL+ QIEEL+ +G +RESLSPCAVPALL+PKKDG WRMC DSRA+N 
Sbjct: 618  NKPAYRCDPNATKELQHQIEELMAKGFVRESLSPCAVPALLVPKKDGTWRMCTDSRAINN 677

Query: 2383 ITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAFKTREGLFEWLV 2204
            ITV+Y FPIPRLDD+LD+L GA++FSK+DL+ GYHQ+RIR GDEWKTAFKT+ GL+EWLV
Sbjct: 678  ITVKYRFPIPRLDDMLDELSGASIFSKIDLRQGYHQVRIREGDEWKTAFKTKHGLYEWLV 737

Query: 2203 MPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHLRAVLSILRTEC 2024
            MPFGLSNAPSTFMR+M + LRP +G   VVYFDDILVYSK+  +HL HL  V  ILR + 
Sbjct: 738  MPFGLSNAPSTFMRLMTEVLRPCLGKFAVVYFDDILVYSKTKGEHLKHLEVVFKILREQK 797

Query: 2023 FYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEVRSFHGLASFYR 1844
             Y    KC F+ E V FLGY +S  GI VD   IAA+Q WP PTT+TEVRSFHGLASFYR
Sbjct: 798  LYGKLEKCTFMVEEVAFLGYLISGRGISVDQENIAAMQSWPTPTTVTEVRSFHGLASFYR 857

Query: 1843 RFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKLTHAPLLALPDFSVPFELHSDA 1664
            RFI +FST++APIT+ M    F W  QA  +F  IK  + + P+L LPDF   FE+  DA
Sbjct: 858  RFIKNFSTVVAPITECMRKGEFQWTEQAQQSFEKIKQLMCNTPILKLPDFDQLFEVECDA 917

Query: 1663 SKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAVVRAIRHWRHYLFHREFILYT 1484
            S VGIGAVL Q   P+AYFSEKLN  + +YSTYD EFYA++RA+ HW HYL  + F+L++
Sbjct: 918  SGVGIGAVLIQSQKPVAYFSEKLNGAKLKYSTYDKEFYAIIRALMHWNHYLKPKPFVLHS 977

Query: 1483 DHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITNKVADALSRRHSLLVDMRIEV 1304
            DHEALK+IN Q  L+ RHA W  FLQ FTF  K++ G  N VADALSRRHSLL  M   V
Sbjct: 978  DHEALKYINGQHKLNFRHAKWVEFLQSFTFSSKYKEGKKNVVADALSRRHSLLSVMSNRV 1037

Query: 1303 PGFDSFRELYATDSFFK---IILSSLARGDASDFILHDGFLFKGICLCVPMCSLRLRLVA 1133
             GF+  +ELY  D  F    I  +   +   S ++L +GFLF+G  LCVP  S R  L+ 
Sbjct: 1038 LGFEFMKELYKEDPDFSEEWITQTEGHKNQGSKYLLQEGFLFQGNKLCVPRGSYRDLLIR 1097

Query: 1132 ELHS---TGHVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRICQVSKGTSTNAGLYRPLP 962
            E+HS    GH G  +++++++ Q++WP +  DV   + RC  CQ+SK +S   G Y PLP
Sbjct: 1098 EVHSGGMGGHFGVQKTLEILQDQFYWPRMMGDVQIILRRCSKCQLSK-SSFQPGPYTPLP 1156

Query: 961  IPSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPCKRSADAVHVAQLFFREV 782
            +PS+PW  LSMDF++ LPRTQRG DS+ VVVDRFSKM HF+ CK++ DAV VA+LF +E+
Sbjct: 1157 VPSKPWEDLSMDFIVALPRTQRGKDSVMVVVDRFSKMAHFVACKKTEDAVSVAELFLKEI 1216

Query: 781  YRLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSAYHPQTDGQTEVVNRSLGNLLR 602
             RLHG+P +IVSDRDT+F+ +FW++LW +  T+L FS+++HPQTDGQTEV NR+LG +LR
Sbjct: 1217 VRLHGVPKTIVSDRDTKFMGYFWKTLWKLLKTKLLFSTSHHPQTDGQTEVTNRTLGRILR 1276

Query: 601  CLVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGFLPRAPVDLLTLPSRTREDRR 422
            CLV  + + WD+KL+ AEFA N A + +TG SPF+VVYG  P  P+DL ++P +   +  
Sbjct: 1277 CLVSKSLKDWDLKLAAAEFAFNRAPSTATGHSPFEVVYGVNPLMPLDLSSVP-KENINLD 1335

Query: 421  ATDFMADLCQVHAATRAKLVDTTAKYKRAADTHRRQLEFSVGDYVWAVLTKDRYPAHDYH 242
            A      L ++H   + ++  T  +Y++     + + EF  GD VW  L K+R+PA   +
Sbjct: 1336 AMKRAEQLLKLHETVKRQIERTNEQYQKHLKVPKGKKEFEPGDLVWIHLRKERFPAKRKN 1395

Query: 241  KLSARKIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCHLIPYHGENSFGDETDFDSRAN 62
            KL  R  GP E++EKI P+AY++ LP        FNV  L PY+ ++  GDE     R +
Sbjct: 1396 KLMPRSDGPFEVVEKIGPSAYKIDLPGDYGVHGTFNVGDLSPYYEDS--GDEEVTGLRTS 1453

Query: 61   HLQEGKND 38
             +Q G  D
Sbjct: 1454 PVQPGGVD 1461


>gb|PKU64373.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1546

 Score = 1222 bits (3161), Expect = 0.0
 Identities = 633/1367 (46%), Positives = 858/1367 (62%), Gaps = 25/1367 (1%)
 Frame = -1

Query: 4123 EHSFKIDIPEFHGTLDADEFLDWMVSVDEILDFKDVPADRRVALVVTRLRGRASAWWQQL 3944
            E   K+DIP F G L  +++LDW  SV+   D+ ++ A+++V  V  RL+G ASAWW QL
Sbjct: 176  EFKVKLDIPFFDGRLHIEDYLDWERSVENFFDYMEIEAEKQVKYVACRLKGGASAWWTQL 235

Query: 3943 KTMRSRQSKPKLTSWDKFKTKLRNEFLPFNYSRTLYQKFQQLRQGSRTIDAYSDEFYQLL 3764
               R R+ +  + SW + K  LR  FLP +Y + LY K+Q   QG+R+++ Y+++FY L 
Sbjct: 236  LQSRRREGRGPVRSWTRMKQLLRGHFLPTDYEQMLYLKYQHCTQGNRSVNEYTEDFYNLS 295

Query: 3763 VRSDVRETDDQLVSRYIGGLRLQYQDVLNMFSPSSVSEAHQRAVLYEKQLLR-------R 3605
             R+D+ ET +QLV+RYIGGL+   QD L + S  S+S+A   A+  E QL R       R
Sbjct: 296  ARNDLNETTNQLVARYIGGLKDSIQDKLELNSVWSLSQAVNFALKAELQLGRHLRSGSHR 355

Query: 3604 SPFPLPSSGNHFDRSPTGSQIKPAPTLPSGSRAQGDLGFLXXXXXXXXXXXXXXXR---- 3437
              F    SG  F + P     K  P   +G  A                           
Sbjct: 356  RQFA--DSGAEFSKQPGTVMRKTPPVADNGGLANPVRSTSDPKAPVKPKLPFKENPYPRP 413

Query: 3436 ----CFNCGDPSHLQSACPKRASTRALYVDDVCDADFSSSPVYDDDISAQPPEEFLHGDV 3269
                CF C  P H  + CP R   + +  +   D +   + +       +   E + GD 
Sbjct: 414  QGLKCFRCFQPGHKSNECPNRQQLQLMDGETEEDVELLEAEL-------EAEIEDVVGDE 466

Query: 3268 GQ--LLVLQRVCLTPRREDDDSMQRHKLFESTCTVQGKICRFIIDSGSCENVVAADAIQK 3095
            G+  + VL+++ L PR++   S QRH +F++ CT+  K+C  +IDSG  ENVV+   +Q 
Sbjct: 467  GEPVVCVLEKLLLAPRKQV--SSQRHSIFKTKCTIASKVCDLLIDSGCTENVVSKALVQA 524

Query: 3094 LNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVWCDVVPMDACHLLLGRP 2915
            L L T  H  PY ++W++R  EI+VT    + FSIG  YT  V CDVV MD CHL+LGRP
Sbjct: 525  LQLKTSKHSQPYKISWVKRGMEISVTDTCRVQFSIGKHYTCEVLCDVVEMDVCHLILGRP 584

Query: 2914 WQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXPTD--AHPRVLSISYSAFARAMDAS 2741
            WQ+D G I+DGR NTY+  +   ++ LL              P +  ++ +    +   +
Sbjct: 585  WQFDVGAIYDGRANTYTLEWKNKRLRLLPHSAGTGDKSESVSPALHVVNGNGLIASWKEN 644

Query: 2740 SFVLLLVSRDVSESPNVP--SVVAPLLSEFADIFPDELPPGLPPLRMIQHQIDFIPGAKL 2567
            + +  LV R+ +   +    SV+  L  +F D+F +E+   LPPLR +QHQID +PG+ L
Sbjct: 645  TILFALVLREAAPRCDAGDRSVIGKLQEQFQDLFSEEVT-NLPPLRSLQHQIDLVPGSTL 703

Query: 2566 PNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPALLIPKKDGAWRMCVDSRALN 2387
            PN PH+R+SP EH+ L++ +++LL    I+ SLSPCAVPALL+PKKDG+WRMC+DSRA+N
Sbjct: 704  PNLPHHRLSPKEHQVLQQIVDDLLKNNLIQPSLSPCAVPALLVPKKDGSWRMCMDSRAIN 763

Query: 2386 KITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAFKTREGLFEWL 2207
            KITV++ FP+PR+++LL++L GA +FSKLDL+SGYHQIRIRPGDEWKT FKTR GL+EW 
Sbjct: 764  KITVKFRFPVPRVEELLEKLSGAAIFSKLDLRSGYHQIRIRPGDEWKTTFKTRHGLYEWK 823

Query: 2206 VMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHLRAVLSILRTE 2027
            VMPFGL NAPSTFMR+M + L+P +    V YFDDILV+S ++ DHL HL  + ++LR  
Sbjct: 824  VMPFGLCNAPSTFMRLMTEVLKPFLNISCVAYFDDILVFSSTLDDHLKHLTDIFNVLRQN 883

Query: 2026 CFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEVRSFHGLASFY 1847
              Y  PSKC F    V FLG+ VSA G+ VD  KI AI+ W  P T T+VRSFHGLA+FY
Sbjct: 884  QLYLNPSKCDFAVTTVHFLGFVVSAAGVQVDRRKIDAIESWTTPKTFTDVRSFHGLANFY 943

Query: 1846 RRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKLTHAPLLALPDFSVPFELHSD 1667
            RRFI +FS++MAPITD +  K F W  +   +F +IK  L+ AP+LALP+F  PF + +D
Sbjct: 944  RRFIKNFSSVMAPITDCLKMKQFHWTVEQDRSFEEIKQALSTAPMLALPNFDKPFHVDTD 1003

Query: 1666 ASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAVVRAIRHWRHYLFHREFILY 1487
            AS +GIGAVLSQ   P+ +FSEKL  +R ++S Y+ E YAVVRA++ W  YL H+EFIL 
Sbjct: 1004 ASCIGIGAVLSQENRPVEFFSEKLCPSRQKWSVYEQELYAVVRALKQWEPYLLHQEFILC 1063

Query: 1486 TDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITNKVADALSRRHSLLVDMRIE 1307
            +DH AL+ IN Q  ++  HA W  FLQ+F+FV+KH++G  N VADALSRR+ L+  ++ E
Sbjct: 1064 SDHWALQFINKQKHINRMHARWVLFLQRFSFVLKHKTGKQNVVADALSRRNLLITQLQTE 1123

Query: 1306 VPGFDSFRELYATDSFFKIILSSLARGDAS-DFILHDGFLFKGICLCVPMCSLRLRLVAE 1130
            + G +  +ELY  D  F  I +   R +++ DF +   FLFK   LC+P  S R +L+ E
Sbjct: 1124 ITGLECLKELYPADPDFGEIWAECQRDNSNIDFSVRHEFLFKRNLLCIPDSSWRPQLIKE 1183

Query: 1129 LHSTG---HVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRICQVSKGTSTNAGLYRPLPI 959
            +H  G   HVGR  +   ++ ++FWP L RDV RFV RC +CQ  K     +GLY PLP 
Sbjct: 1184 VHCGGLAAHVGRTNTYLQLQSRFFWPHLHRDVMRFVERCSVCQSYKSGGQLSGLYLPLPT 1243

Query: 958  PSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPCKRSADAVHVAQLFFREVY 779
            P   W  LS+DFV+GLPRT+RGHDSI VVVDRFSKM HFIPCK++ DA++VA++FF E+ 
Sbjct: 1244 PETIWEDLSLDFVMGLPRTKRGHDSIMVVVDRFSKMAHFIPCKKTFDALNVARIFFAEIV 1303

Query: 778  RLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSAYHPQTDGQTEVVNRSLGNLLRC 599
            RLHGLP S+ SDRD +F+SHFW+ LW    T++  SSAYHPQTDGQTEV+NR+LGN+LRC
Sbjct: 1304 RLHGLPRSLTSDRDVKFISHFWKELWKRLQTDIKLSSAYHPQTDGQTEVINRTLGNMLRC 1363

Query: 598  LVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGFLPRAPVDLLTLPSRTREDRRA 419
            +V + PR WD  L QAEFA+N   NRSTG SPF +VY   P   VDL  LP      + A
Sbjct: 1364 VVQEHPRLWDELLGQAEFAYNSMTNRSTGRSPFSIVYTKNPNHTVDLAVLPK--CNSKTA 1421

Query: 418  TDFMADLCQVHAATRAKLVDTTAKYKRAADTHRRQLEFSVGDYVWAVLTKDRYPAHDYHK 239
             DF +    +    R KL+++ AKYK  AD  RR+  F  GD V   + ++R+P   Y K
Sbjct: 1422 ADFASQFTAMLQEVRDKLLESNAKYKERADKKRRERSFKPGDLVMIRVRRERFPPGTYSK 1481

Query: 238  LSARKIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCHLIPYHGENS 98
            LS  KIGP  +L +INPNAY + LP H  TS  FN+  L  YH  +S
Sbjct: 1482 LSPHKIGPFSVLRQINPNAYIVDLPKHYNTSTTFNIGDLTAYHPPDS 1528


>gb|PKU62072.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1511

 Score = 1221 bits (3158), Expect = 0.0
 Identities = 632/1378 (45%), Positives = 877/1378 (63%), Gaps = 34/1378 (2%)
 Frame = -1

Query: 4141 DDSRRWEHSF--KIDIPEFHGTLDADEFLDWMVSVDEILDFKDVPADRRVALVVTRLRGR 3968
            D +RR +  F  K+DIP F G L  +++LDW  SV+   ++ D+  D++V  V  RL+G 
Sbjct: 126  DFNRRPQGEFRVKLDIPFFDGRLHIEDYLDWERSVETFFEYMDIAPDKQVKYVACRLKGG 185

Query: 3967 ASAWWQQLKTMRSRQSKPKLTSWDKFKTKLRNEFLPFNYSRTLYQKFQQLRQGSRTIDAY 3788
            ASAWW QL   R R+ +  + SW + K  LR+++LP +Y + LY K+Q   QG+RT+  Y
Sbjct: 186  ASAWWLQLLQARRREDRGIVRSWSRMKQLLRSQYLPTDYEQILYHKYQHCSQGNRTVSEY 245

Query: 3787 SDEFYQLLVRSDVRETDDQLVSRYIGGLRLQYQDVLNMFSPSSVSEAHQRAVLYEKQLLR 3608
            ++EF++L  R+D+ E  + LV+RYIGGL+   QD L M S  S+S+A   A+  E QL R
Sbjct: 246  TEEFHRLSARNDLNENANHLVARYIGGLKEAIQDKLEMNSVWSLSQAVNFALKAEIQLNR 305

Query: 3607 RSPFPLPSSG------NHFDRSPTGS------QIKPAPTL-PSGSRAQGDLGFLXXXXXX 3467
                  P SG      +H + + + +      Q+  + T  P  + A G  G +      
Sbjct: 306  AYK---PYSGRRMAADHHLENTRSSNLQGKSTQVGSSATASPPAAVASGLPGAIADSKVQ 362

Query: 3466 XXXXXXXXXR---------CFNCGDPSHLQSACPKRASTRALYVDDVCDADFSSSPVYDD 3314
                               CF C    H  + CP R   +      +  A+       +D
Sbjct: 363  PKWKPPVRDNPYAKPSTIKCFRCFQVGHKSNECPSRPQLQ------IASAENEEIREEND 416

Query: 3313 DISAQPPEEFLHGDVGQLLV--LQRVCLTPRREDDDSMQRHKLFESTCTVQGKICRFIID 3140
            D +A+  EE +  D G+ LV  ++++ L PR++ +   QR+ +F++ CT+ GK+C  +ID
Sbjct: 417  DPNAELEEE-ISPDSGEPLVCVMEKILLAPRQQQNS--QRNAVFKTRCTINGKVCDLLID 473

Query: 3139 SGSCENVVAADAIQKLNLSTEPHPTPYSLAWLQRDNEITVTRRVLLTFSIGGKYTDSVWC 2960
            SG  ENV+A   +Q L L T     PY ++W+++  +I VT    + FSIG  Y   V C
Sbjct: 474  SGCTENVIARSVVQALQLKTTKSSHPYKISWVKKGMDIAVTDMCRVNFSIGKHYVCEVLC 533

Query: 2959 DVVPMDACHLLLGRPWQYDRGVIHDGRQNTYSFLFHGVKVTLLXXXXXXXPTDAHPRVLS 2780
            DV+ MD CH++LGRPWQ+D G  +DGR N+YSF + G K+ L+               L 
Sbjct: 534  DVLDMDVCHIILGRPWQFDVGATYDGRANSYSFDWKGRKLKLVPYPVDSREPQKQKVSLM 593

Query: 2779 --ISYSAFARAMDASSFVLLLVSRDVSE--SPNVPSVVAPLLSEFADIFPDELPPGLPPL 2612
              +S +A   A   SS +L LV R+ S   +P     +  LL +F+ + P+ LP  LPPL
Sbjct: 594  HMVSATALINAGKESSTLLALVIREQSTPIAPLKSPEIQQLLEKFSGLAPETLPAILPPL 653

Query: 2611 RMIQHQIDFIPGAKLPNRPHYRMSPSEHEELRRQIEELLHRGHIRESLSPCAVPALLIPK 2432
            R +QHQID +PGA LPN PHYR+SP EH  L++ ++ELL +  I+ SLSPCAVPALL+PK
Sbjct: 654  RALQHQIDLVPGANLPNLPHYRLSPKEHSTLQQLVDELLEKQLIQPSLSPCAVPALLVPK 713

Query: 2431 KDGAWRMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDE 2252
            KDG+WRMC+DSRA+NKIT+++ FPIPRLD+LL++L G+T+FSKLDL+SGYHQIRIRPGDE
Sbjct: 714  KDGSWRMCMDSRAINKITIKFRFPIPRLDELLEKLAGSTIFSKLDLRSGYHQIRIRPGDE 773

Query: 2251 WKTAFKTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHD 2072
            WKTAFKTR+GL+EW VMPFGL NAP+TFMR+MN+ L+P +    VVYFDDIL++SK+  +
Sbjct: 774  WKTAFKTRQGLYEWKVMPFGLCNAPATFMRLMNEILKPFLNRFCVVYFDDILIFSKTRDE 833

Query: 2071 HLAHLRAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPT 1892
            H+ HL  V  +L+    Y   SKC F   +  FLGY +SA G+ VD AK+ AI DWP P 
Sbjct: 834  HMQHLEQVFDVLQNNKLYLNLSKCEFAASSTYFLGYIISAEGVLVDPAKVKAIIDWPTPQ 893

Query: 1891 TLTEVRSFHGLASFYRRFIPHFSTIMAPITDLMHGKSFSWPTQAATAFTDIKHKLTHAPL 1712
            +  ++RSFHGLA+FYRRFI  FS + AP+TD +  K F W      +F  +K  L+ AP+
Sbjct: 894  SFFDIRSFHGLANFYRRFIKGFSVLAAPLTDCLKAKQFVWTESQNDSFLAVKRALSTAPV 953

Query: 1711 LALPDFSVPFELHSDASKVGIGAVLSQHGHPIAYFSEKLNATRGRYSTYDIEFYAVVRAI 1532
            LALPDF  PF + +DAS  G+GAVL Q   P+ YFSEKL   R ++S Y+ E YAVVRA+
Sbjct: 954  LALPDFEKPFVVETDASLTGVGAVLMQLDRPVEYFSEKLCPARQKWSVYEQELYAVVRAL 1013

Query: 1531 RHWRHYLFHREFILYTDHEALKHINSQDSLSARHAAWSAFLQQFTFVVKHQSGITNKVAD 1352
            + W HYL H++F+L++DH+AL++IN+Q  L+  HA W  FLQ+FTFV+KH+SG  N+VAD
Sbjct: 1014 KQWEHYLLHQDFVLHSDHKALQYINNQKLLNRMHARWIMFLQRFTFVLKHKSGSQNRVAD 1073

Query: 1351 ALSRRHSLLVDMRIEVPGFDSFRELYATDSFFKIILSSLARGDASD-FILHDGFLFKGIC 1175
            ALSR+ SLLV ++ E+ G    +ELY +D  F  + ++     + D + +  G+LF+   
Sbjct: 1074 ALSRQSSLLVQLKTEITGLQCLQELYPSDKDFSQVWAACKEQPSVDHYAIRHGYLFRQHA 1133

Query: 1174 LCVPMCSLRLRLVAELHSTG---HVGRDRSIDLVRRQYFWPTLRRDVSRFVARCRICQVS 1004
            LC+P  S R +L+ E+HS G   HVGRD++I+ ++ ++FWP LR+DV++F+ RC +CQ  
Sbjct: 1134 LCIPDSSWRQQLIREIHSGGLAAHVGRDKTIEQLQLRFFWPHLRKDVTKFIERCSVCQSY 1193

Query: 1003 KGTSTNAGLYRPLPIPSQPWGALSMDFVLGLPRTQRGHDSIFVVVDRFSKMVHFIPCKRS 824
            K     AGLY PLP+P+  W  LS+DF+LGLPRT++G+DSI VVVDRFSKM HFI CK++
Sbjct: 1194 KSGGQTAGLYLPLPVPASIWEDLSLDFILGLPRTKKGNDSIMVVVDRFSKMAHFIACKKT 1253

Query: 823  ADAVHVAQLFFREVYRLHGLPVSIVSDRDTRFLSHFWRSLWSMANTELHFSSAYHPQTDG 644
             DA+++A LFFRE+ RLHG+P S+ SDRD +F+SHFWR LW    T+++ SSAYHPQ+DG
Sbjct: 1254 FDALNIAHLFFREIVRLHGIPRSLTSDRDVKFVSHFWRELWRRLQTDINLSSAYHPQSDG 1313

Query: 643  QTEVVNRSLGNLLRCLVGDTPRAWDIKLSQAEFAHNLALNRSTGLSPFQVVYGFLPRAPV 464
            QTEVVNR+LGN+LRCLV + P  WD  LSQAEFA+N   +RSTG SPF +VY   P   V
Sbjct: 1314 QTEVVNRTLGNMLRCLVQEHPNRWDELLSQAEFAYNSMPSRSTGTSPFHIVYTKAPNHTV 1373

Query: 463  DLLTLPSRTREDRRATDFMADLCQVHAATRAKLVDTTAKYKRAADTHRRQLEFSVGDYVW 284
            D+  LP  T   + A        ++    R KLV++  +YK A D HRR+  F  G+ V 
Sbjct: 1374 DVAVLPKCT--SKTAVKTAEQFAKLLQDVRLKLVESNEQYKAAVDLHRRKRIFKPGELVM 1431

Query: 283  AVLTKDRYPAHDYHKLSARKIGPVEILEKINPNAYRLRLPNHLRTSDVFNVCHLIPYH 110
              L ++R P   Y KL  RK+GP  IL+KIN NAY + LP    T+  FNV  + PY+
Sbjct: 1432 IRLRRERLPPGKYSKLGRRKVGPFPILQKINDNAYVIDLPPDFGTASTFNVADIHPYY 1489