BLASTX nr result
ID: Rehmannia29_contig00011353
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00011353
(1081 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012847871.1| PREDICTED: methyl-CpG-binding domain-contain... 107 2e-25
ref|XP_012847870.1| PREDICTED: methyl-CpG-binding domain-contain... 107 3e-25
ref|XP_012827978.1| PREDICTED: uncharacterized protein LOC105949... 110 3e-25
gb|OIT03015.1| hypothetical protein A4A49_30779 [Nicotiana atten... 80 9e-14
gb|OMO91254.1| Methyl-CpG DNA binding protein [Corchorus olitorius] 62 2e-07
ref|XP_010541402.1| PREDICTED: methyl-CpG-binding domain-contain... 59 2e-06
ref|XP_010541401.1| PREDICTED: methyl-CpG-binding domain-contain... 59 2e-06
ref|XP_010483558.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-b... 59 3e-06
ref|XP_010443689.1| PREDICTED: methyl-CpG-binding domain-contain... 58 6e-06
ref|WP_071331689.1| hypothetical protein [Staphylococcus sp. LCT... 59 1e-05
>ref|XP_012847871.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like
isoform X2 [Erythranthe guttata]
Length = 95
Score = 107 bits (268), Expect = 2e-25
Identities = 47/71 (66%), Positives = 57/71 (80%)
Frame = +3
Query: 585 GPAKKPTKRRVSDDDSWMPEGWVKKVSQRPQKGKFPGYVDKKYYAPGVARAFRSKAEALR 764
G KKPTK+ DDDSWMPEGWVK+V++RP GKFPGY DK+YYAPGV+RAFRSK +AL+
Sbjct: 15 GATKKPTKKTEVDDDSWMPEGWVKRVNKRPLTGKFPGYEDKRYYAPGVSRAFRSKVKALK 74
Query: 765 YIESLKNAATS 797
YIE +N +
Sbjct: 75 YIEQQQNTTAT 85
>ref|XP_012847870.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like
isoform X1 [Erythranthe guttata]
Length = 98
Score = 107 bits (268), Expect = 3e-25
Identities = 47/71 (66%), Positives = 57/71 (80%)
Frame = +3
Query: 585 GPAKKPTKRRVSDDDSWMPEGWVKKVSQRPQKGKFPGYVDKKYYAPGVARAFRSKAEALR 764
G KKPTK+ DDDSWMPEGWVK+V++RP GKFPGY DK+YYAPGV+RAFRSK +AL+
Sbjct: 15 GATKKPTKKTEVDDDSWMPEGWVKRVNKRPLTGKFPGYEDKRYYAPGVSRAFRSKVKALK 74
Query: 765 YIESLKNAATS 797
YIE +N +
Sbjct: 75 YIEQQQNTTAT 85
>ref|XP_012827978.1| PREDICTED: uncharacterized protein LOC105949229 [Erythranthe
guttata]
ref|XP_012827979.1| PREDICTED: uncharacterized protein LOC105949229 [Erythranthe
guttata]
Length = 203
Score = 110 bits (276), Expect = 3e-25
Identities = 57/121 (47%), Positives = 76/121 (62%), Gaps = 1/121 (0%)
Frame = +3
Query: 438 EPTWMEERMGDGSGVTCGVAEHSSDVNHSLEEPSRTEE-RMGDGSGETSSGPAKKPTKRR 614
+P ER+G+ S + CG PS+ ++ ++G G KKPTK+
Sbjct: 95 QPHKERERVGERSAMPCG--------------PSKQKKAKLG--------GATKKPTKKT 132
Query: 615 VSDDDSWMPEGWVKKVSQRPQKGKFPGYVDKKYYAPGVARAFRSKAEALRYIESLKNAAT 794
DDDSWMPEGWVK+V++RP GKFPGY DK+YYAPGV+RAFRSK +AL+YIE +N
Sbjct: 133 EEDDDSWMPEGWVKRVNKRPLTGKFPGYEDKRYYAPGVSRAFRSKVKALKYIEQQQNTTA 192
Query: 795 S 797
+
Sbjct: 193 T 193
>gb|OIT03015.1| hypothetical protein A4A49_30779 [Nicotiana attenuata]
Length = 240
Score = 80.5 bits (197), Expect = 9e-14
Identities = 44/90 (48%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = +3
Query: 525 LEEPSRTEERMGDGSGETSSGPAKKPTKRRVS--DDDSWMPEGWVKKVSQRPQKGKFPGY 698
++E + E+ G S K+ +R+ S DDDSW+PEGW KKV + GK GY
Sbjct: 102 VQETGQLEQETGQSSNANEEVQKKRRKRRKSSNGDDDSWLPEGW-KKVETCRRNGKTAGY 160
Query: 699 VDKKYYAPGVARAFRSKAEALRYIESLKNA 788
VDK Y APGV RAFRSK AL YIE K A
Sbjct: 161 VDKSYKAPGVGRAFRSKKAALEYIEKQKLA 190
>gb|OMO91254.1| Methyl-CpG DNA binding protein [Corchorus olitorius]
Length = 208
Score = 61.6 bits (148), Expect = 2e-07
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Frame = +3
Query: 516 NHSLEEPSRTEERMGDGSGETSSGPAKKPTKRRVSDDDSWMPEGWVKKVSQRPQKGKFPG 695
+ S E P R + +G + S A+ KRRV ++W+P GW+ + R G G
Sbjct: 30 DRSFETPKRPNGSISNGGADKSPSSAEPKAKRRVVPPETWLPAGWLVEDRVR-TSGATAG 88
Query: 696 YVDKKYYAPGVARAFRSKAEALRYIES----LKNAATSS 800
VDK Y P R FRSK E L Y+E+ K A TSS
Sbjct: 89 SVDKYYVDPSSGRKFRSKNEVLYYLETGTKRKKGAGTSS 127
>ref|XP_010541402.1| PREDICTED: methyl-CpG-binding domain-containing protein 5-like
isoform X2 [Tarenaya hassleriana]
Length = 222
Score = 58.9 bits (141), Expect = 2e-06
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Frame = +3
Query: 462 MGDGSGVTCGVAEHSSDVNHSLEE---PSRTEERMGDGSGETSSGPA--KKPTKRRVSDD 626
+ GS ++ ++ + +++H ++ P R+ G + ++ PA K KR D
Sbjct: 18 LSSGSFISSNISTDAGNLDHGVKRQPIPPRSGMSSGADPPKNTAQPAVESKTRKRAAPGD 77
Query: 627 DSWMPEGWVKKVSQRPQ-KGKFPGYVDKKYYAPGVARAFRSKAEALRYIE 773
++W+P GW +V R + G G VDK Y+ PG R FRSK E + Y+E
Sbjct: 78 NNWLPPGW--RVEDRVRTSGATAGSVDKYYHEPGTGRKFRSKTEVMYYLE 125
>ref|XP_010541401.1| PREDICTED: methyl-CpG-binding domain-containing protein 5-like
isoform X1 [Tarenaya hassleriana]
Length = 223
Score = 58.9 bits (141), Expect = 2e-06
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Frame = +3
Query: 462 MGDGSGVTCGVAEHSSDVNHSLEE---PSRTEERMGDGSGETSSGPA--KKPTKRRVSDD 626
+ GS ++ ++ + +++H ++ P R+ G + ++ PA K KR D
Sbjct: 18 LSSGSFISSNISTDAGNLDHGVKRQPIPPRSGMSSGADPPKNTAQPAVESKTRKRAAPGD 77
Query: 627 DSWMPEGWVKKVSQRPQ-KGKFPGYVDKKYYAPGVARAFRSKAEALRYIE 773
++W+P GW +V R + G G VDK Y+ PG R FRSK E + Y+E
Sbjct: 78 NNWLPPGW--RVEDRVRTSGATAGSVDKYYHEPGTGRKFRSKTEVMYYLE 125
>ref|XP_010483558.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding
domain-containing protein 6-like [Camelina sativa]
Length = 234
Score = 58.5 bits (140), Expect = 3e-06
Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Frame = +3
Query: 465 GDGSGVTCGVAEHSSDVNHSLEEPSRTEERMGDGSGETSSGPAKKPTKRRVSDDDSWMPE 644
G G V G+A + +N SL D SG+ A+ +++R + D+W+P
Sbjct: 47 GSGESVRIGMANGTDQMNPSL-----------DSSGQQ----AESKSRKRAAPGDNWLPS 91
Query: 645 GWVKKVSQRPQKGKFPGYVDKKYYAPGVARAFRSKAEALRYIE---SLKNAATSSN 803
GW + R G G VDK YY P R FRS+ E L Y+E S K A + N
Sbjct: 92 GWRVEDKVRTS-GATAGSVDKYYYEPNTGRKFRSRTEVLYYLEHGTSKKGAKKAEN 146
>ref|XP_010443689.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like
isoform X1 [Camelina sativa]
ref|XP_010443690.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like
isoform X2 [Camelina sativa]
Length = 237
Score = 57.8 bits (138), Expect = 6e-06
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Frame = +3
Query: 465 GDGSGVTCGVAEHSSDVNHSLEEPSRTEERMGDGSGETSSGPAKKPTKRRVSDDDSWMPE 644
G G V G+A + +N SL+ +S A+ +++R + D+W+P
Sbjct: 47 GSGESVRIGMANGTDQMNPSLD---------------SSGHQAESKSRKRAAPGDNWLPS 91
Query: 645 GWVKKVSQRPQKGKFPGYVDKKYYAPGVARAFRSKAEALRYIE---SLKNAATSSN 803
GW + R G G VDK YY P R FRS+ E L Y+E S K A + N
Sbjct: 92 GWRVEDKVRTS-GATAGSVDKYYYEPNTGRKFRSRTEVLYYLEHGTSKKGAKKAEN 146
>ref|WP_071331689.1| hypothetical protein [Staphylococcus sp. LCT-H4]
gb|OIJ29312.1| hypothetical protein BK821_11400 [Staphylococcus sp. LCT-H4]
Length = 723
Score = 58.9 bits (141), Expect = 1e-05
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Frame = +3
Query: 162 KVADNGMEPLPNHQ--LQPPSQVLQIDAANSEEISRMQERIEDGSGVTSAAAEDSFDVNQ 335
KV +GM NH ++ P+QV+ + + + + I D TS + + D +
Sbjct: 69 KVNSSGM----NHPRLVEDPAQVVSAVSGSDKT-----KNITD----TSQSNDTDQDNSD 115
Query: 336 FLEEPTWMEERMGDGSGVTSAAAEHSFDVNEFLEEPTWMEERMGDGSGVTCGVAEHSSDV 515
EEPT + R DG+G TS + D ++ EEPT + R DG+G T + D
Sbjct: 116 GTEEPTQPDNRSDDGAGDTSQPDDTDQDNSDGTEEPTQPDNRSDDGAGDTSQPDDTDQDN 175
Query: 516 NHSLEEPSRTEERMGDGSGETS 581
+ EEP++ + R DG+G+TS
Sbjct: 176 SDGTEEPTQPDNRSDDGAGDTS 197