BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00010252
         (684 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ATI24793.1| ribosomal protein L2 (plastid) [Plukenetia volubi...   194   2e-55
gb|OTF84348.1| hypothetical protein HannXRQ_Chr00c0585g0576281 [...    92   8e-27
gb|OTG02756.1| hypothetical protein HannXRQ_Chr13g0416621 [Helia...    92   9e-27
gb|PNT12259.1| hypothetical protein POPTR_011G074400v3 [Populus ...    86   2e-17
gb|OAY24583.1| hypothetical protein MANES_17G026800, partial [Ma...    80   7e-16
ref|YP_009381150.1| hypothetical protein AEK19_MT0752 (mitochond...    79   1e-15
gb|OMO96696.1| 50S ribosomal protein L2, chloroplastic-like prot...    78   1e-15
gb|OMO84071.1| 50S ribosomal protein L2, chloroplastic-like prot...    76   7e-15
gb|PPE00692.1| hypothetical protein GOBAR_DD02271 [Gossypium bar...    71   5e-12
gb|KCW89268.1| hypothetical protein EUGRSUZ_A01563 [Eucalyptus g...    67   4e-11
dbj|BAS71929.1| Os01g0333432 [Oryza sativa Japonica Group]             67   5e-11
gb|AFK37971.1| unknown [Lotus japonicus]                               62   7e-10
gb|PKA59862.1| 30S ribosomal protein S3, chloroplastic [Apostasi...    61   7e-09
gb|KJB15228.1| hypothetical protein B456_002G165900 [Gossypium r...    58   1e-08
gb|AIJ28060.1| ribosomal protein L2 (chloroplast) [Trifolium lup...    65   1e-08
gb|KVH96328.1| Ribosomal protein L2 [Cynara cardunculus var. sco...    60   5e-08
gb|KJB10645.1| hypothetical protein B456_001G213100 [Gossypium r...    62   6e-08
gb|KJB08379.1| hypothetical protein B456_001G079400 [Gossypium r...    61   8e-08
gb|PNT60815.1| hypothetical protein BRADI_5g05657v3 [Brachypodiu...    42   3e-07
gb|PPD92023.1| hypothetical protein GOBAR_DD11055 [Gossypium bar...    58   1e-06

>gb|ATI24793.1| ribosomal protein L2 (plastid) [Plukenetia volubilis]
          Length = 513

 Score =  194 bits (492), Expect = 2e-55
 Identities = 102/131 (77%), Positives = 104/131 (79%)
 Frame = +2

Query: 2   MGNALPLSAV*TIDLRNWK*PIRFTTKPRNRSLIQFEYLYRIDXXXXXXXXXXXXXXXVV 181
           MGNALPLSAV TIDLRNWK PIRFTTKPRNRSLIQ EYLYRID               VV
Sbjct: 127 MGNALPLSAVCTIDLRNWKSPIRFTTKPRNRSLIQIEYLYRIDLNRKLKSNGSKCLSSVV 186

Query: 182 PHIKLLTLEI**YGEDKIVSSTDRTGSAPSFKERRTGYSHFI*WSEAN*KLSSGNSKDSP 361
           PH KLLTLEI  YGEDKIVSSTDRT S P FKERRTGYSHFI WSEAN KLSSGNSKDSP
Sbjct: 187 PHRKLLTLEISSYGEDKIVSSTDRTRSTPCFKERRTGYSHFICWSEANCKLSSGNSKDSP 246

Query: 362 GEK*RCLLRYP 394
           G+K +CLLRYP
Sbjct: 247 GKKSKCLLRYP 257



 Score = 84.7 bits (208), Expect = 3e-15
 Identities = 52/109 (47%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
 Frame = +1

Query: 250 QNRKRPFFQREEDGLFTFHLMVRGELKAKQWEF*RFPGGKIEMSPTLPIT*YVEVST*FH 429
           + R  P F+    G   F        K         PG K +     P   YVEVST FH
Sbjct: 210 RTRSTPCFKERRTGYSHFICWSEANCKLSSGNSKDSPGKKSKCLLRYPS--YVEVSTSFH 267

Query: 430 RVIRSECYMKNISQMTEREDLGCRRSYHE*FGRFGFI*I-STHVVLHCT 573
           RVIRSECYMKNISQM E+EDLGCRR+ HE F RFGF+ I S   + H T
Sbjct: 268 RVIRSECYMKNISQMKEQEDLGCRRASHEPFSRFGFLYIHSCSTLFHFT 316



 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 39/48 (81%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
 Frame = +3

Query: 546 IHPCGTSLYH--IYKIHLYRYHHLHPESRMLWKKLVQFGKGF*LIKKR 683
           IH C T L+H  IYKIHLYRYHHLHPESRMLWKKLVQFGK F LIKK+
Sbjct: 306 IHSCST-LFHFTIYKIHLYRYHHLHPESRMLWKKLVQFGKRFCLIKKK 352


>gb|OTF84348.1| hypothetical protein HannXRQ_Chr00c0585g0576281 [Helianthus annuus]
          Length = 236

 Score = 92.0 bits (227), Expect(2) = 8e-27
 Identities = 43/48 (89%), Positives = 45/48 (93%)
 Frame = -1

Query: 684 SSF*SIKTPSQTVQASSKAYGFLDVDDDIYTDGSYIYGTMKYHMGGYL 541
           SSF SIKTPSQTVQASSKAYGFLDVD DIYTDGSY+YG MKYHMGGY+
Sbjct: 104 SSFLSIKTPSQTVQASSKAYGFLDVDGDIYTDGSYLYGIMKYHMGGYI 151



 Score = 57.0 bits (136), Expect(2) = 8e-27
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = -3

Query: 535 IQICRITHGMIFYILGLPVPSSGLCSSCSI 446
           I+ICRITH MIFYILG PVPSSGLCSSC +
Sbjct: 153 IKICRITHVMIFYILGFPVPSSGLCSSCFV 182



 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = -1

Query: 81  FVVNLIGYFQLRKSIVQTALKGRAFPI 1
           FVVNLIGYFQLRKSIVQTALKGRAFPI
Sbjct: 181 FVVNLIGYFQLRKSIVQTALKGRAFPI 207


>gb|OTG02756.1| hypothetical protein HannXRQ_Chr13g0416621 [Helianthus annuus]
          Length = 150

 Score = 92.0 bits (227), Expect(2) = 9e-27
 Identities = 43/48 (89%), Positives = 45/48 (93%)
 Frame = -1

Query: 684 SSF*SIKTPSQTVQASSKAYGFLDVDDDIYTDGSYIYGTMKYHMGGYL 541
           SSF SIKTPSQTVQASSKAYGFLDVD DIYTDGSY+YG MKYHMGGY+
Sbjct: 16  SSFLSIKTPSQTVQASSKAYGFLDVDGDIYTDGSYLYGIMKYHMGGYI 63



 Score = 57.0 bits (136), Expect(2) = 9e-27
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = -3

Query: 535 IQICRITHGMIFYILGLPVPSSGLCSSCSI 446
           I+ICRITH MIFYILG PVPSSGLCSSC +
Sbjct: 65  IKICRITHVMIFYILGFPVPSSGLCSSCFV 94



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = -1

Query: 81  FVVNLIGYFQLRKSIVQTALKGRAFPI 1
           FVVNLIGYFQLRKSIVQTALKGRAFPI
Sbjct: 93  FVVNLIGYFQLRKSIVQTALKGRAFPI 119


>gb|PNT12259.1| hypothetical protein POPTR_011G074400v3 [Populus trichocarpa]
          Length = 174

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 207 RYSNMEKTKLFQAPTEPEAPLLSKRGGRVIHISFDGQRRIES 332
           RYSNMEKTKLFQAPTEPEAPL+SKRGGRVIHISFDGQRRIES
Sbjct: 133 RYSNMEKTKLFQAPTEPEAPLVSKRGGRVIHISFDGQRRIES 174


>gb|OAY24583.1| hypothetical protein MANES_17G026800, partial [Manihot esculenta]
          Length = 95

 Score = 80.1 bits (196), Expect = 7e-16
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +3

Query: 207 RYSNMEKTKLFQAPTEPEAPLLSKRGGRVIHISFDGQRRIES 332
           RYSNMEK KLF APTEPEAPL+S+RGGR+IHISFDGQRRIES
Sbjct: 54  RYSNMEKIKLFPAPTEPEAPLVSRRGGRIIHISFDGQRRIES 95


>ref|YP_009381150.1| hypothetical protein AEK19_MT0752 (mitochondrion) [Utricularia
           reniformis]
 gb|ART30995.1| hypothetical protein AEK19_MT0752 (mitochondrion) [Utricularia
           reniformis]
          Length = 60

 Score = 78.6 bits (192), Expect = 1e-15
 Identities = 36/40 (90%), Positives = 37/40 (92%)
 Frame = +1

Query: 277 REEDGLFTFHLMVRGELKAKQWEF*RFPGGKIEMSPTLPI 396
           +E DGLFTFHLMVRGELKAKQWEF RFPGGKIEMSP LPI
Sbjct: 12  KERDGLFTFHLMVRGELKAKQWEFERFPGGKIEMSPMLPI 51


>gb|OMO96696.1| 50S ribosomal protein L2, chloroplastic-like protein [Corchorus
           olitorius]
 gb|OMP12908.1| 50S ribosomal protein L2, chloroplastic-like protein [Corchorus
           olitorius]
 gb|OMP12963.1| 50S ribosomal protein L2, chloroplastic-like protein [Corchorus
           olitorius]
          Length = 38

 Score = 77.8 bits (190), Expect = 1e-15
 Identities = 37/38 (97%), Positives = 38/38 (100%)
 Frame = +3

Query: 219 MEKTKLFQAPTEPEAPLLSKRGGRVIHISFDGQRRIES 332
           MEKTKLFQAPTEPEAPL+SKRGGRVIHISFDGQRRIES
Sbjct: 1   MEKTKLFQAPTEPEAPLVSKRGGRVIHISFDGQRRIES 38


>gb|OMO84071.1| 50S ribosomal protein L2, chloroplastic-like protein [Corchorus
           olitorius]
          Length = 38

 Score = 75.9 bits (185), Expect = 7e-15
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = +3

Query: 219 MEKTKLFQAPTEPEAPLLSKRGGRVIHISFDGQRRIES 332
           MEKTKLF APTEPEAPL+SKRGGRVIHISFDGQRRIES
Sbjct: 1   MEKTKLFHAPTEPEAPLVSKRGGRVIHISFDGQRRIES 38


>gb|PPE00692.1| hypothetical protein GOBAR_DD02271 [Gossypium barbadense]
          Length = 126

 Score = 70.9 bits (172), Expect = 5e-12
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = +3

Query: 219 MEKTKLFQAPTEPEAPLLSKRGGRVIHISFDGQRRIES 332
           MEKTKLFQAPTE EA L+SKRGGRVIHISFDGQRRIES
Sbjct: 1   MEKTKLFQAPTELEAALVSKRGGRVIHISFDGQRRIES 38


>gb|KCW89268.1| hypothetical protein EUGRSUZ_A01563 [Eucalyptus grandis]
          Length = 77

 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -3

Query: 535 IQICRITHGMIFYILGLPVPSSGLCSSCSIQTE 437
           IQICRITH MIFYILGLPVPSSGLCSSCSIQT+
Sbjct: 45  IQICRITHVMIFYILGLPVPSSGLCSSCSIQTK 77


>dbj|BAS71929.1| Os01g0333432 [Oryza sativa Japonica Group]
          Length = 85

 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 31/38 (81%), Positives = 35/38 (92%)
 Frame = +3

Query: 207 RYSNMEKTKLFQAPTEPEAPLLSKRGGRVIHISFDGQR 320
           RY NMEKTKLF+A TEPEAPL+SKRGG+VIHI F+GQR
Sbjct: 48  RYGNMEKTKLFEACTEPEAPLVSKRGGQVIHIYFNGQR 85


>gb|AFK37971.1| unknown [Lotus japonicus]
          Length = 27

 Score = 62.4 bits (150), Expect = 7e-10
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +3

Query: 585 IHLYRYHHLHPESRMLWKKLVQFGKGF 665
           +HLYRYHHLHPESRMLWKKLVQFG+GF
Sbjct: 1   MHLYRYHHLHPESRMLWKKLVQFGRGF 27


>gb|PKA59862.1| 30S ribosomal protein S3, chloroplastic [Apostasia shenzhenica]
          Length = 69

 Score = 60.8 bits (146), Expect = 7e-09
 Identities = 31/37 (83%), Positives = 31/37 (83%)
 Frame = +1

Query: 226 RQNCFKHRQNRKRPFFQREEDGLFTFHLMVRGELKAK 336
           RQNC K  QN KRP FQRE DGLFTFHLMVRGELKAK
Sbjct: 34  RQNCLKRPQNWKRPPFQRE-DGLFTFHLMVRGELKAK 69


>gb|KJB15228.1| hypothetical protein B456_002G165900 [Gossypium raimondii]
          Length = 171

 Score = 57.8 bits (138), Expect(2) = 1e-08
 Identities = 32/50 (64%), Positives = 33/50 (66%)
 Frame = +3

Query: 219 MEKTKLFQAPTEPEAPLLSKRGGRVIHISFDGQRRIES*AVGILKIPRGK 368
           M  TKLFQAP EPEA L+SKR GRVIHISFDGQR            PRGK
Sbjct: 1   MGMTKLFQAPIEPEASLVSKREGRVIHISFDGQR-----------FPRGK 39



 Score = 30.0 bits (66), Expect(2) = 1e-08
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +1

Query: 352 RFPGGKIEMSPTLPI 396
           RFP GKIEMSP LPI
Sbjct: 34  RFPRGKIEMSPILPI 48


>gb|AIJ28060.1| ribosomal protein L2 (chloroplast) [Trifolium lupinaster]
          Length = 317

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = +3

Query: 567 LYHIYKIHLYRYHHLHPESRMLWKKLVQFGKGF*LIKKR 683
           L +I  IH+YRY++ HPESRMLWKKLVQFGKGF LIKK+
Sbjct: 130 LSYIRSIHVYRYYNRHPESRMLWKKLVQFGKGFCLIKKK 168


>gb|KVH96328.1| Ribosomal protein L2 [Cynara cardunculus var. scolymus]
          Length = 114

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = +3

Query: 582 KIHLYRYHHLHPESRMLWKKLVQFGKGF*LIKK 680
           K+   RYHHLHPE RMLWKKLVQFGKGF LIKK
Sbjct: 10  KVGHLRYHHLHPEIRMLWKKLVQFGKGFWLIKK 42


>gb|KJB10645.1| hypothetical protein B456_001G213100 [Gossypium raimondii]
          Length = 236

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = +3

Query: 219 MEKTKLFQAPTEPEAPLLSKRGGRVIHISFD 311
           MEKTKLFQAPT+PEAPL+SKRGGR+IHISFD
Sbjct: 1   MEKTKLFQAPTKPEAPLVSKRGGRLIHISFD 31


>gb|KJB08379.1| hypothetical protein B456_001G079400 [Gossypium raimondii]
          Length = 184

 Score = 60.8 bits (146), Expect = 8e-08
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +3

Query: 219 MEKTKLFQAPTEPEAPLLSKRGGRVIHISFD 311
           MEKTKLFQ+P EPEAPL+SK+GGRVIHISFD
Sbjct: 1   MEKTKLFQSPAEPEAPLISKKGGRVIHISFD 31


>gb|PNT60815.1| hypothetical protein BRADI_5g05657v3 [Brachypodium distachyon]
          Length = 179

 Score = 41.6 bits (96), Expect(2) = 3e-07
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -2

Query: 269 KGRFRFCRCLKQFCLLHIT 213
           +GRFRFC C KQFCLLHIT
Sbjct: 106 EGRFRFCACFKQFCLLHIT 124



 Score = 41.2 bits (95), Expect(2) = 3e-07
 Identities = 22/34 (64%), Positives = 23/34 (67%)
 Frame = -1

Query: 102 ISDRFLGFVVNLIGYFQLRKSIVQTALKGRAFPI 1
           + DRFLGFVVNLIGYFQLR          RAFPI
Sbjct: 127 LDDRFLGFVVNLIGYFQLR----------RAFPI 150


>gb|PPD92023.1| hypothetical protein GOBAR_DD11055 [Gossypium barbadense]
          Length = 186

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +3

Query: 219 MEKTKLFQAPTEPEAPLLSKRGGRVIHISFD 311
           MEKTKLFQAPTE EAP +SKRGG+VIHISFD
Sbjct: 1   MEKTKLFQAPTELEAPFVSKRGGQVIHISFD 31