BLASTX nr result

ID: Rehmannia29_contig00010124 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00010124
         (728 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN17635.1| hypothetical protein CDL12_09702 [Handroanthus im...    91   7e-20
gb|PIN08233.1| hypothetical protein CDL12_19190 [Handroanthus im...    67   2e-10

>gb|PIN17635.1| hypothetical protein CDL12_09702 [Handroanthus impetiginosus]
          Length = 107

 Score = 91.3 bits (225), Expect = 7e-20
 Identities = 53/92 (57%), Positives = 63/92 (68%)
 Frame = -3

Query: 564 MKHVIWLIAVIPFLSHFPFPTTAYERISKSSNEIRSPFMEQGEQTLDCKQPYCFLNSREM 385
           MK+V   +  +   SHFPFPT A E I K SN+ +S  +EQG+QTLD  QP    NS+EM
Sbjct: 1   MKYVSLCLMALLLFSHFPFPTLARENIPKLSNKTKSHTLEQGKQTLDRDQPR-LTNSQEM 59

Query: 384 VVQIKQRARTVPRAIPGGTRGRTRSSAVRGKT 289
           VVQIK+RA    R IPGGTR RTRSSAVR +T
Sbjct: 60  VVQIKKRA----RMIPGGTRARTRSSAVREQT 87


>gb|PIN08233.1| hypothetical protein CDL12_19190 [Handroanthus impetiginosus]
          Length = 123

 Score = 66.6 bits (161), Expect = 2e-10
 Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = -3

Query: 573 MAQMKHVIWLIAVIPFLSH-FPFPTTAYERISKSSNEIRSPFMEQGEQTLDCKQPYCFLN 397
           M + KH+  L+ +  FL   F   T+AY+ I    NE  SP ++Q +QTL+   P C ++
Sbjct: 16  MTERKHIQSLMIITLFLLPVFSLTTSAYQSIF---NESPSPSLQQEKQTLNITHPCCMMS 72

Query: 396 SREMVVQIKQRARTVPRAIPGGTRGRTRSSA 304
           S+++  QIK+R R +P  +PGGTR RTRSSA
Sbjct: 73  SQKLGFQIKRRGRIIP--VPGGTRARTRSSA 101


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