BLASTX nr result
ID: Rehmannia29_contig00009922
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00009922
(711 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_022847296.1| probable U6 snRNA-associated Sm-like protein... 186 3e-57
gb|KOM34891.1| hypothetical protein LR48_Vigan02g104100 [Vigna a... 185 4e-57
gb|KJB49936.1| hypothetical protein B456_008G146200 [Gossypium r... 185 4e-57
gb|KJB49937.1| hypothetical protein B456_008G146200 [Gossypium r... 185 6e-57
gb|KVI03986.1| Like-Sm (LSM) domain-containing protein, partial ... 186 7e-57
gb|PKI32190.1| hypothetical protein CRG98_047426 [Punica granatum] 185 7e-57
ref|XP_011079681.1| sm-like protein LSM4 [Sesamum indicum] 186 9e-57
ref|XP_021611647.1| sm-like protein LSM4 isoform X1 [Manihot esc... 186 9e-57
gb|PIN22635.1| Small nuclear ribonucleoprotein (snRNP) [Handroan... 186 1e-56
ref|XP_002523061.1| PREDICTED: sm-like protein LSM4 [Ricinus com... 186 1e-56
ref|XP_012082737.1| sm-like protein LSM4 [Jatropha curcas] 186 1e-56
ref|XP_022847298.1| probable U6 snRNA-associated Sm-like protein... 186 1e-56
dbj|GAV87175.1| LSM domain-containing protein [Cephalotus follic... 186 1e-56
ref|XP_015891977.1| PREDICTED: probable U6 snRNA-associated Sm-l... 186 1e-56
ref|XP_010259597.1| PREDICTED: probable U6 snRNA-associated Sm-l... 186 1e-56
ref|XP_024027712.1| probable U6 snRNA-associated Sm-like protein... 186 1e-56
dbj|GAY56629.1| hypothetical protein CUMW_173370 [Citrus unshiu] 186 1e-56
ref|XP_010038199.1| PREDICTED: probable U6 snRNA-associated Sm-l... 186 1e-56
gb|KCW50019.1| hypothetical protein EUGRSUZ_K03467 [Eucalyptus g... 186 1e-56
ref|XP_006444300.1| probable U6 snRNA-associated Sm-like protein... 186 1e-56
>ref|XP_022847296.1| probable U6 snRNA-associated Sm-like protein LSm4 [Olea europaea
var. sylvestris]
Length = 111
Score = 186 bits (473), Expect = 3e-57
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>gb|KOM34891.1| hypothetical protein LR48_Vigan02g104100 [Vigna angularis]
Length = 90
Score = 185 bits (470), Expect = 4e-57
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSR+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRT 87
>gb|KJB49936.1| hypothetical protein B456_008G146200 [Gossypium raimondii]
gb|KJB49939.1| hypothetical protein B456_008G146200 [Gossypium raimondii]
Length = 90
Score = 185 bits (470), Expect = 4e-57
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSR+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRA 87
>gb|KJB49937.1| hypothetical protein B456_008G146200 [Gossypium raimondii]
Length = 101
Score = 185 bits (470), Expect = 6e-57
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSR+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRA 87
>gb|KVI03986.1| Like-Sm (LSM) domain-containing protein, partial [Cynara
cardunculus var. scolymus]
Length = 135
Score = 186 bits (473), Expect = 7e-57
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>gb|PKI32190.1| hypothetical protein CRG98_047426 [Punica granatum]
Length = 103
Score = 185 bits (470), Expect = 7e-57
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSR+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRA 87
>ref|XP_011079681.1| sm-like protein LSM4 [Sesamum indicum]
Length = 144
Score = 186 bits (473), Expect = 9e-57
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>ref|XP_021611647.1| sm-like protein LSM4 isoform X1 [Manihot esculenta]
gb|OAY49530.1| hypothetical protein MANES_05G063400 [Manihot esculenta]
Length = 146
Score = 186 bits (473), Expect = 9e-57
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>gb|PIN22635.1| Small nuclear ribonucleoprotein (snRNP) [Handroanthus
impetiginosus]
gb|PIN26688.1| Small nuclear ribonucleoprotein (snRNP) [Handroanthus
impetiginosus]
Length = 147
Score = 186 bits (473), Expect = 1e-56
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>ref|XP_002523061.1| PREDICTED: sm-like protein LSM4 [Ricinus communis]
gb|EEF39246.1| Small nuclear ribonucleoprotein SM D3, putative [Ricinus communis]
Length = 147
Score = 186 bits (473), Expect = 1e-56
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>ref|XP_012082737.1| sm-like protein LSM4 [Jatropha curcas]
Length = 148
Score = 186 bits (473), Expect = 1e-56
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>ref|XP_022847298.1| probable U6 snRNA-associated Sm-like protein LSm4 [Olea europaea
var. sylvestris]
Length = 149
Score = 186 bits (473), Expect = 1e-56
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>dbj|GAV87175.1| LSM domain-containing protein [Cephalotus follicularis]
Length = 149
Score = 186 bits (473), Expect = 1e-56
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>ref|XP_015891977.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
[Ziziphus jujuba]
ref|XP_015891978.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
[Ziziphus jujuba]
Length = 149
Score = 186 bits (473), Expect = 1e-56
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>ref|XP_010259597.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
isoform X1 [Nelumbo nucifera]
Length = 149
Score = 186 bits (473), Expect = 1e-56
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>ref|XP_024027712.1| probable U6 snRNA-associated Sm-like protein LSm4 [Morus notabilis]
ref|XP_024027718.1| probable U6 snRNA-associated Sm-like protein LSm4 [Morus notabilis]
Length = 150
Score = 186 bits (473), Expect = 1e-56
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>dbj|GAY56629.1| hypothetical protein CUMW_173370 [Citrus unshiu]
Length = 150
Score = 186 bits (473), Expect = 1e-56
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>ref|XP_010038199.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
[Eucalyptus grandis]
ref|XP_010038200.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
[Eucalyptus grandis]
gb|KCW50020.1| hypothetical protein EUGRSUZ_K03467 [Eucalyptus grandis]
gb|KCW50021.1| hypothetical protein EUGRSUZ_K03467 [Eucalyptus grandis]
Length = 150
Score = 186 bits (473), Expect = 1e-56
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>gb|KCW50019.1| hypothetical protein EUGRSUZ_K03467 [Eucalyptus grandis]
Length = 150
Score = 186 bits (473), Expect = 1e-56
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
>ref|XP_006444300.1| probable U6 snRNA-associated Sm-like protein LSm4 isoform X1
[Citrus clementina]
ref|XP_006479932.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
isoform X1 [Citrus sinensis]
gb|ESR57540.1| hypothetical protein CICLE_v10022685mg [Citrus clementina]
gb|KDO87271.1| hypothetical protein CISIN_1g031941mg [Citrus sinensis]
dbj|GAY40930.1| hypothetical protein CUMW_055570 [Citrus unshiu]
Length = 150
Score = 186 bits (473), Expect = 1e-56
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 5 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 184
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 185 IRGNTIKYLRVPDEVIDKVQEETKSRS 265
IRGNTIKYLRVPDEVIDKVQEETKSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87