BLASTX nr result

ID: Rehmannia29_contig00009685 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00009685
         (536 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011097901.1| DNA polymerase I B, chloroplastic/mitochondr...   203   2e-57
gb|PIN15369.1| DNA-directed DNA polymerase [Handroanthus impetig...   186   4e-51
gb|PIN12213.1| DNA-directed DNA polymerase [Handroanthus impetig...   148   4e-38
ref|XP_012841747.1| PREDICTED: DNA polymerase I B, chloroplastic...   146   3e-37
gb|KZV33486.1| DNA polymerase I B, chloroplastic/mitochondrial-l...   132   2e-32
ref|XP_022880760.1| DNA polymerase I A, chloroplastic/mitochondr...   102   6e-22
ref|XP_022888417.1| DNA polymerase I A, chloroplastic/mitochondr...    86   4e-16
gb|EYU33626.1| hypothetical protein MIMGU_mgv1a001192mg [Erythra...    84   1e-15

>ref|XP_011097901.1| DNA polymerase I B, chloroplastic/mitochondrial [Sesamum indicum]
          Length = 1079

 Score =  203 bits (517), Expect = 2e-57
 Identities = 114/177 (64%), Positives = 131/177 (74%)
 Frame = -1

Query: 533 LYAHRSNTSVNLKTLPEEDIAEKAKSGSRKIYKREGSGSSRMEKEYTGNVGQNGLRVSHN 354
           L+A+R+N S NLKTL EED+A KAKSG R IY+REGSG  R EKEYT + G +GLRVSHN
Sbjct: 144 LFAYRNNASANLKTLTEEDVAGKAKSGRRNIYEREGSGLRRAEKEYTQSGGDHGLRVSHN 203

Query: 353 QKSLVQVGSSNISLYTNDDDNKMVVEGRSMTKVASPNGLENKGHRDSITDKDNVFDKKES 174
           Q SLVQ G S +S  TND D K+V +  S+ K   PNGLENKG + SIT+K     KKE+
Sbjct: 204 QMSLVQAGCSTVS-DTNDADKKIVFDSCSVKKGVLPNGLENKGRKGSITNK----VKKEA 258

Query: 173 VSADKKAISSDSFSETLNGKITASGGTELHERLSQVYDKVLVVDSIPAARDVVKMLT 3
             A KK + SD+ SE L+ KITASGGTELHERLSQVYD VLVVDSIPAAR VV  LT
Sbjct: 259 KPAAKKTVLSDTVSEPLSEKITASGGTELHERLSQVYDTVLVVDSIPAARQVVSKLT 315


>gb|PIN15369.1| DNA-directed DNA polymerase [Handroanthus impetiginosus]
          Length = 1079

 Score =  186 bits (471), Expect = 4e-51
 Identities = 105/172 (61%), Positives = 126/172 (73%)
 Frame = -1

Query: 518 SNTSVNLKTLPEEDIAEKAKSGSRKIYKREGSGSSRMEKEYTGNVGQNGLRVSHNQKSLV 339
           S+TS NLKTL EEDIAE+ K+G RKIY  +G+G SR EKEYT NVGQ  L +SHNQ  L 
Sbjct: 146 SSTSANLKTLSEEDIAEETKAGRRKIYG-QGNGLSRKEKEYTRNVGQQQLHISHNQMPLA 204

Query: 338 QVGSSNISLYTNDDDNKMVVEGRSMTKVASPNGLENKGHRDSITDKDNVFDKKESVSADK 159
                N+ L TND DNK+V+E RSM K A PNG E+KG++DSITDKDN F+K  + S ++
Sbjct: 205 HA-RCNVVLDTNDVDNKIVLESRSMKKGAHPNGWESKGNQDSITDKDNAFEKNRTDSNNR 263

Query: 158 KAISSDSFSETLNGKITASGGTELHERLSQVYDKVLVVDSIPAARDVVKMLT 3
           K  +S+S SE  +  + AS G EL ERLSQVYDKVLVVDSI AAR+VV MLT
Sbjct: 264 K--TSNSISEPFSETVAASEGAELRERLSQVYDKVLVVDSIIAAREVVSMLT 313


>gb|PIN12213.1| DNA-directed DNA polymerase [Handroanthus impetiginosus]
          Length = 894

 Score =  148 bits (374), Expect = 4e-38
 Identities = 93/185 (50%), Positives = 121/185 (65%), Gaps = 7/185 (3%)
 Frame = -1

Query: 536 RLYAHRSNTSVNLKTLPEEDIAEKAKSGSRKI-------YKREGSGSSRMEKEYTGNVGQ 378
           +L+AH +  S NLK LPEEDIAEK+ SG R         Y+ E +  SR E+ +TGNV Q
Sbjct: 143 KLFAHSNRISANLKILPEEDIAEKSYSGGRNTKDCFVSQYEGERNVLSRKEEVHTGNVAQ 202

Query: 377 NGLRVSHNQKSLVQVGSSNISLYTNDDDNKMVVEGRSMTKVASPNGLENKGHRDSITDKD 198
            GLRV  NQ + VQVG + +S YTN  DN +V++  SM KVA   GL+  G++DS+ D D
Sbjct: 203 QGLRVPLNQTAPVQVGYNRVS-YTNGGDNTIVLDSNSMMKVA---GLD--GYQDSLMDMD 256

Query: 197 NVFDKKESVSADKKAISSDSFSETLNGKITASGGTELHERLSQVYDKVLVVDSIPAARDV 18
           +VFDKKE+ +ADK ++S++   ET   KI     +EL + LS+VYD VLVVDSIP AR V
Sbjct: 257 SVFDKKETHTADKISVSNEIVDETRIEKI-PDEASELRQTLSEVYDWVLVVDSIPVARQV 315

Query: 17  VKMLT 3
           V  LT
Sbjct: 316 VGKLT 320


>ref|XP_012841747.1| PREDICTED: DNA polymerase I B, chloroplastic/mitochondrial
           [Erythranthe guttata]
          Length = 1078

 Score =  146 bits (368), Expect = 3e-37
 Identities = 90/183 (49%), Positives = 116/183 (63%), Gaps = 5/183 (2%)
 Frame = -1

Query: 536 RLYAHRSNTSVNLKTLPEEDIAEKAKSGSRKIYKR-EGSGSSRMEKEYTGNVGQNGLRVS 360
           RL+ H ++TS NL+T+ +E IAEK  S  +KIY+  EGSG SR E+E+ GN GQNG  V 
Sbjct: 141 RLFTHGNSTSANLRTVQDEAIAEKVNSNGKKIYEGGEGSGLSRNEREFAGNGGQNGYNVF 200

Query: 359 HNQKSLVQVGSSNISLYTNDDDNKMVVEGRSMTKVASPNGLENKGHRDSITDKDNVFDK- 183
           H+Q  LV+  S+ +  YTN DD           K+A    LEN+G RDSI  KDNV  K 
Sbjct: 201 HSQMPLVKDRSNRVP-YTNGDD-----------KIA----LENEGDRDSINVKDNVVVKI 244

Query: 182 ---KESVSADKKAISSDSFSETLNGKITASGGTELHERLSQVYDKVLVVDSIPAARDVVK 12
               +S SA+KK +S D+ SE  + ++  S  TELHERLSQ+YDKVLVVD +  AR VV 
Sbjct: 245 KTASKSGSANKKTVSCDNISELPSKRVATSEVTELHERLSQIYDKVLVVDDVTEARRVVS 304

Query: 11  MLT 3
           +LT
Sbjct: 305 LLT 307


>gb|KZV33486.1| DNA polymerase I B, chloroplastic/mitochondrial-like [Dorcoceras
           hygrometricum]
          Length = 1078

 Score =  132 bits (333), Expect = 2e-32
 Identities = 75/172 (43%), Positives = 108/172 (62%), Gaps = 1/172 (0%)
 Frame = -1

Query: 515 NTSVNLKTLPEEDIAEKAKSGSRKIYKREGSGSSRMEKEYTGNVG-QNGLRVSHNQKSLV 339
           N S N++ L ++ IA+K KSG   +Y+ EG G S+ E+EY GN+G   G  VSH++ S++
Sbjct: 134 NRSANIEILRQDKIADKDKSGRSNVYEGEGEGLSKKEREYVGNLGLARGTCVSHDRASVI 193

Query: 338 QVGSSNISLYTNDDDNKMVVEGRSMTKVASPNGLENKGHRDSITDKDNVFDKKESVSADK 159
            V     S YTND + K+V + + M +    N L+N GH+ SIT  D++ D+K+    + 
Sbjct: 194 HVRRDPES-YTNDSEKKVVKQSQLMPQ--GVNSLKNYGHKGSITCMDSIPDEKDPDMTNG 250

Query: 158 KAISSDSFSETLNGKITASGGTELHERLSQVYDKVLVVDSIPAARDVVKMLT 3
           K++S D + E +   I  +  TEL +RLS+VYDKVLVVDSI AA  VV MLT
Sbjct: 251 KSVSCDGYDEIITENIATAEATELRKRLSKVYDKVLVVDSITAAEQVVNMLT 302


>ref|XP_022880760.1| DNA polymerase I A, chloroplastic/mitochondrial-like [Olea europaea
           var. sylvestris]
          Length = 1093

 Score =  102 bits (254), Expect = 6e-22
 Identities = 75/191 (39%), Positives = 104/191 (54%), Gaps = 14/191 (7%)
 Frame = -1

Query: 533 LYAHRSNTSVNLKTLPEEDIAEKAKSG-------SRKIYKREGSGSSRMEKEYTGNVGQN 375
           L+AH+ N +VNL+TLPEED A+ AK G         K YK +GS +   E EY+ NVGQ+
Sbjct: 149 LFAHKENIAVNLRTLPEEDTAKGAKLGVIEHSSECIKRYKGDGSRTISKEMEYSVNVGQD 208

Query: 374 GLRVSHNQKSLVQVGSSNISLYTNDDDNKMVVEGRSMTKVASPNGL------ENKGHRDS 213
              V H    +  V S  +  Y N+ D  M ++ +S+ + A PN L      EN     S
Sbjct: 209 RPDVYHGPSFVDGVRSDKV--YVNNGDGSMSLQNQSLLEGALPNRLFLEDSVENGKDEVS 266

Query: 212 ITDKDNVFDKKESVSADKKAISSDSFS-ETLNGKITASGGTELHERLSQVYDKVLVVDSI 36
               + V D+ ++ +AD+K I +D    ET+  +        + ERL  VYDKVLVVDSI
Sbjct: 267 KIGNELVIDEIKNGAADRKCIVADRTQIETITHE-----SKNIFERLRTVYDKVLVVDSI 321

Query: 35  PAARDVVKMLT 3
            AAR+VV +LT
Sbjct: 322 SAAREVVGLLT 332


>ref|XP_022888417.1| DNA polymerase I A, chloroplastic/mitochondrial-like [Olea europaea
           var. sylvestris]
          Length = 1093

 Score = 85.9 bits (211), Expect = 4e-16
 Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 13/190 (6%)
 Frame = -1

Query: 533 LYAHRSNTSVNLKTLPEEDIAEKAKSG-------SRKIYKREGSGSSRMEKEYTGNVGQN 375
           L+AH+   +VNL+TLPE + AE AK G         K+YK +GS     E EY  NVGQ 
Sbjct: 150 LFAHKEKIAVNLRTLPE-NTAEGAKLGVIEESSECIKMYKGDGSRPISKEMEYRVNVGQF 208

Query: 374 GLRVSHNQKSLVQVGSSNISLYTNDDDNKMVVEGRSMTKVASPNGL------ENKGHRDS 213
              V HN  S+  V S+ + ++  +D+  M ++ +S+ + A PN L      EN     S
Sbjct: 209 RSPVLHNPLSIDDVRSNKVCMH--NDNGSMSLQNQSLLEGALPNRLLLEDNVENGKDEVS 266

Query: 212 ITDKDNVFDKKESVSADKKAISSDSFSETLNGKITASGGTELHERLSQVYDKVLVVDSIP 33
               +   ++ ++ +AD K + +D+ + T   +IT      L + L  VYDKVLVV+SI 
Sbjct: 267 KIVNELAVNEIKNGAADHKCVIADTANGTRIEQITHEPKNIL-KGLCSVYDKVLVVNSIT 325

Query: 32  AARDVVKMLT 3
           AAR+VV +LT
Sbjct: 326 AAREVVGLLT 335


>gb|EYU33626.1| hypothetical protein MIMGU_mgv1a001192mg [Erythranthe guttata]
          Length = 869

 Score = 84.3 bits (207), Expect = 1e-15
 Identities = 55/112 (49%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
 Frame = -1

Query: 326 SNISLYTNDDDNKMVVEGRSMTKVASPNGLENKGHRDSITDKDNVFDK----KESVSADK 159
           SN   YTN DD           K+A    LEN+G RDSI  KDNV  K     +S SA+K
Sbjct: 8   SNRVPYTNGDD-----------KIA----LENEGDRDSINVKDNVVVKIKTASKSGSANK 52

Query: 158 KAISSDSFSETLNGKITASGGTELHERLSQVYDKVLVVDSIPAARDVVKMLT 3
           K +S D+ SE  + ++  S  TELHERLSQ+YDKVLVVD +  AR VV +LT
Sbjct: 53  KTVSCDNISELPSKRVATSEVTELHERLSQIYDKVLVVDDVTEARRVVSLLT 104


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