BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00009520
         (469 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012829497.1| PREDICTED: sm-like protein LSM3A [Erythranth...   142   2e-41
ref|XP_022854862.1| sm-like protein LSM3A isoform X2 [Olea europ...   142   3e-41
ref|XP_012839233.1| PREDICTED: sm-like protein LSM3A [Erythranth...   142   3e-41
ref|XP_020083900.1| sm-like protein LSM3A [Ananas comosus] >gi|1...   140   1e-40
gb|EYU17441.1| hypothetical protein MIMGU_mgv1a015297mg [Erythra...   142   2e-40
ref|XP_011074758.1| sm-like protein LSM3A [Sesamum indicum]           140   2e-40
gb|PIM99001.1| Small nuclear ribonucleoprotein (snRNP) LSM3 [Han...   140   3e-40
ref|XP_011101520.1| sm-like protein LSM3A [Sesamum indicum]           140   3e-40
emb|CDP11392.1| unnamed protein product [Coffea canephora]            140   3e-40
gb|KHN15430.1| U6 snRNA-associated Sm-like protein LSm3 [Glycine...   139   5e-40
ref|XP_009402631.1| PREDICTED: sm-like protein LSM3B [Musa acumi...   139   5e-40
ref|XP_019465241.1| PREDICTED: sm-like protein LSM3B [Lupinus an...   139   8e-40
ref|XP_022773387.1| sm-like protein LSM3B [Durio zibethinus]          139   8e-40
gb|AFK35032.1| unknown [Lotus japonicus] >gi|388511495|gb|AFK438...   139   8e-40
gb|KZV16527.1| hypothetical protein F511_11359 [Dorcoceras hygro...   139   8e-40
ref|XP_004290522.1| PREDICTED: sm-like protein LSM3B [Fragaria v...   139   8e-40
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin...   139   8e-40
ref|XP_003607812.1| u6 snRNA-associated-like-Smprotein [Medicago...   139   8e-40
ref|XP_004513701.1| PREDICTED: sm-like protein LSM3A [Cicer arie...   139   8e-40
dbj|GAU51075.1| hypothetical protein TSUD_291110 [Trifolium subt...   139   9e-40

>ref|XP_012829497.1| PREDICTED: sm-like protein LSM3A [Erythranthe guttata]
          Length = 97

 Score =  142 bits (359), Expect = 2e-41
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLRHDRELRGKLHAYDQHLNMILGDVEEIIT+VEIDDETYEEIVRTTKRTVPFLFVRGDG
Sbjct: 27  KLRHDRELRGKLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTKRTVPFLFVRGDG 86

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 87  VILVSPPLRTA 97


>ref|XP_022854862.1| sm-like protein LSM3A isoform X2 [Olea europaea var. sylvestris]
 ref|XP_022894278.1| sm-like protein LSM3A [Olea europaea var. sylvestris]
          Length = 97

 Score =  142 bits (358), Expect = 3e-41
 Identities = 69/71 (97%), Positives = 71/71 (100%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLRHDRELRGKLHAYDQHLNMILGDVEEI+TSVEIDDETYEEIVRTT+RTVPFLFVRGDG
Sbjct: 27  KLRHDRELRGKLHAYDQHLNMILGDVEEIVTSVEIDDETYEEIVRTTRRTVPFLFVRGDG 86

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 87  VILVSPPLRTA 97


>ref|XP_012839233.1| PREDICTED: sm-like protein LSM3A [Erythranthe guttata]
 ref|XP_012839234.1| PREDICTED: sm-like protein LSM3A [Erythranthe guttata]
 gb|EYU36853.1| hypothetical protein MIMGU_mgv1a017018mg [Erythranthe guttata]
 gb|EYU36854.1| hypothetical protein MIMGU_mgv1a017018mg [Erythranthe guttata]
          Length = 97

 Score =  142 bits (358), Expect = 3e-41
 Identities = 69/71 (97%), Positives = 71/71 (100%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLRHDRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDG
Sbjct: 27  KLRHDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDG 86

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 87  VILVSPPLRTA 97


>ref|XP_020083900.1| sm-like protein LSM3A [Ananas comosus]
 gb|OAY70168.1| Sm-like protein LSM3B [Ananas comosus]
 gb|OAY72633.1| Sm-like protein LSM3B [Ananas comosus]
          Length = 97

 Score =  140 bits (354), Expect = 1e-40
 Identities = 67/71 (94%), Positives = 71/71 (100%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLRHDRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTT+RT+PFLFVRGDG
Sbjct: 27  KLRHDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTIPFLFVRGDG 86

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 87  VILVSPPLRTA 97


>gb|EYU17441.1| hypothetical protein MIMGU_mgv1a015297mg [Erythranthe guttata]
          Length = 162

 Score =  142 bits (359), Expect = 2e-40
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLRHDRELRGKLHAYDQHLNMILGDVEEIIT+VEIDDETYEEIVRTTKRTVPFLFVRGDG
Sbjct: 92  KLRHDRELRGKLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTKRTVPFLFVRGDG 151

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 152 VILVSPPLRTA 162


>ref|XP_011074758.1| sm-like protein LSM3A [Sesamum indicum]
          Length = 98

 Score =  140 bits (353), Expect = 2e-40
 Identities = 68/71 (95%), Positives = 71/71 (100%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLRHDRELRGKLHAYDQHLNMILGDVEEIIT++EIDDETYEEIVRTT+RTVPFLFVRGDG
Sbjct: 27  KLRHDRELRGKLHAYDQHLNMILGDVEEIITTMEIDDETYEEIVRTTRRTVPFLFVRGDG 86

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 87  VILVSPPLRTA 97


>gb|PIM99001.1| Small nuclear ribonucleoprotein (snRNP) LSM3 [Handroanthus
           impetiginosus]
          Length = 97

 Score =  140 bits (352), Expect = 3e-40
 Identities = 67/71 (94%), Positives = 71/71 (100%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLRHDRELRGKLHAYDQHLNMILGDVEEI+T++EIDDETYEEIVRTT+RTVPFLFVRGDG
Sbjct: 27  KLRHDRELRGKLHAYDQHLNMILGDVEEIVTTMEIDDETYEEIVRTTRRTVPFLFVRGDG 86

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 87  VILVSPPLRTA 97


>ref|XP_011101520.1| sm-like protein LSM3A [Sesamum indicum]
          Length = 97

 Score =  140 bits (352), Expect = 3e-40
 Identities = 67/71 (94%), Positives = 71/71 (100%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLRHDRELRGKLHAYDQHLNMILGDVEEI+T++EIDDETYEEIVRTT+RTVPFLFVRGDG
Sbjct: 27  KLRHDRELRGKLHAYDQHLNMILGDVEEIVTTLEIDDETYEEIVRTTRRTVPFLFVRGDG 86

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 87  VILVSPPLRTA 97


>emb|CDP11392.1| unnamed protein product [Coffea canephora]
          Length = 98

 Score =  140 bits (352), Expect = 3e-40
 Identities = 67/71 (94%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLRHDRELRGKLHAYDQHLNMILGDVEE++T+VEIDDETYEEIVRTTKR VPFLFVRGDG
Sbjct: 28  KLRHDRELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETYEEIVRTTKRNVPFLFVRGDG 87

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 88  VILVSPPLRTA 98


>gb|KHN15430.1| U6 snRNA-associated Sm-like protein LSm3 [Glycine soja]
 gb|KRH70311.1| hypothetical protein GLYMA_02G082300 [Glycine max]
          Length = 97

 Score =  139 bits (350), Expect = 5e-40
 Identities = 69/71 (97%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLR DRELRGKLHAYDQHLNMILGDVEEIIT+VEIDDETYEEIVRTTKRTVPFLFVRGDG
Sbjct: 27  KLRSDRELRGKLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTKRTVPFLFVRGDG 86

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 87  VILVSPPLRTA 97


>ref|XP_009402631.1| PREDICTED: sm-like protein LSM3B [Musa acuminata subsp.
           malaccensis]
          Length = 97

 Score =  139 bits (350), Expect = 5e-40
 Identities = 69/71 (97%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLR DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTT+RTVPFLFVRGDG
Sbjct: 27  KLRSDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTRRTVPFLFVRGDG 86

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 87  VILVSPPLRTA 97


>ref|XP_019465241.1| PREDICTED: sm-like protein LSM3B [Lupinus angustifolius]
 gb|OIV98878.1| hypothetical protein TanjilG_21709 [Lupinus angustifolius]
          Length = 96

 Score =  139 bits (349), Expect = 8e-40
 Identities = 68/71 (95%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLR DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDG
Sbjct: 26  KLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDG 85

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 86  VILVSPPLRTA 96


>ref|XP_022773387.1| sm-like protein LSM3B [Durio zibethinus]
          Length = 97

 Score =  139 bits (349), Expect = 8e-40
 Identities = 68/71 (95%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLR DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDG
Sbjct: 27  KLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDG 86

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 87  VILVSPPLRTA 97


>gb|AFK35032.1| unknown [Lotus japonicus]
 gb|AFK43809.1| unknown [Lotus japonicus]
          Length = 97

 Score =  139 bits (349), Expect = 8e-40
 Identities = 68/71 (95%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLR DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDG
Sbjct: 27  KLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDG 86

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 87  VILVSPPLRTA 97


>gb|KZV16527.1| hypothetical protein F511_11359 [Dorcoceras hygrometricum]
          Length = 97

 Score =  139 bits (349), Expect = 8e-40
 Identities = 67/71 (94%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLRHDRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTT+R VPFLFVRGDG
Sbjct: 27  KLRHDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRMVPFLFVRGDG 86

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 87  VILVSPPLRTA 97


>ref|XP_004290522.1| PREDICTED: sm-like protein LSM3B [Fragaria vesca subsp. vesca]
 ref|XP_024162124.1| sm-like protein LSM3B [Rosa chinensis]
 gb|PRQ24723.1| putative sm-like protein Lsm3 [Rosa chinensis]
          Length = 97

 Score =  139 bits (349), Expect = 8e-40
 Identities = 68/71 (95%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLR DRELRGKLHAYDQHLNMILGDVEEI+TSVEIDDETYEEIVRTTKRTVP+LFVRGDG
Sbjct: 27  KLRSDRELRGKLHAYDQHLNMILGDVEEIVTSVEIDDETYEEIVRTTKRTVPYLFVRGDG 86

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 87  VILVSPPLRTA 97


>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
 ref|XP_014506299.1| sm-like protein LSM3A [Vigna radiata var. radiata]
 ref|XP_017438868.1| PREDICTED: sm-like protein LSM3A [Vigna angularis]
 ref|XP_020238104.1| sm-like protein LSM3A [Cajanus cajan]
 gb|ACU13588.1| unknown [Glycine max]
 gb|KHN41267.1| U6 snRNA-associated Sm-like protein LSm3 [Glycine soja]
 gb|KOM55421.1| hypothetical protein LR48_Vigan10g131300 [Vigna angularis]
 gb|KRH08702.1| hypothetical protein GLYMA_16G167900 [Glycine max]
 dbj|BAU02053.1| hypothetical protein VIGAN_11146700 [Vigna angularis var.
           angularis]
 gb|KYP43948.1| U6 snRNA-associated Sm-like protein LSm3 [Cajanus cajan]
 gb|PON76226.1| LSM domain/archaea-type [Parasponia andersonii]
 gb|PON83050.1| LSM domain/archaea-type [Trema orientalis]
          Length = 97

 Score =  139 bits (349), Expect = 8e-40
 Identities = 68/71 (95%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLR DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDG
Sbjct: 27  KLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDG 86

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 87  VILVSPPLRTA 97


>ref|XP_003607812.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
 gb|AES90009.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
          Length = 98

 Score =  139 bits (349), Expect = 8e-40
 Identities = 68/71 (95%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLR DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDG
Sbjct: 28  KLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDG 87

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 88  VILVSPPLRTA 98


>ref|XP_004513701.1| PREDICTED: sm-like protein LSM3A [Cicer arietinum]
          Length = 98

 Score =  139 bits (349), Expect = 8e-40
 Identities = 68/71 (95%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLR DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDG
Sbjct: 28  KLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDG 87

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 88  VILVSPPLRTA 98


>dbj|GAU51075.1| hypothetical protein TSUD_291110 [Trifolium subterraneum]
          Length = 101

 Score =  139 bits (349), Expect = 9e-40
 Identities = 68/71 (95%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   KLRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDG 180
           KLR DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDG
Sbjct: 28  KLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDG 87

Query: 181 VILVSPPLRTA 213
           VILVSPPLRTA
Sbjct: 88  VILVSPPLRTA 98