BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00009519
         (465 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012829497.1| PREDICTED: sm-like protein LSM3A [Erythranth...   139   5e-40
ref|XP_022854862.1| sm-like protein LSM3A isoform X2 [Olea europ...   139   8e-40
ref|XP_012839233.1| PREDICTED: sm-like protein LSM3A [Erythranth...   139   8e-40
ref|XP_020083900.1| sm-like protein LSM3A [Ananas comosus] >gi|1...   137   3e-39
gb|EYU17441.1| hypothetical protein MIMGU_mgv1a015297mg [Erythra...   139   4e-39
ref|XP_011074758.1| sm-like protein LSM3A [Sesamum indicum]           137   4e-39
gb|PIM99001.1| Small nuclear ribonucleoprotein (snRNP) LSM3 [Han...   136   6e-39
ref|XP_011101520.1| sm-like protein LSM3A [Sesamum indicum]           136   6e-39
emb|CDP11392.1| unnamed protein product [Coffea canephora]            136   6e-39
gb|KHN15430.1| U6 snRNA-associated Sm-like protein LSm3 [Glycine...   135   1e-38
ref|XP_009402631.1| PREDICTED: sm-like protein LSM3B [Musa acumi...   135   1e-38
ref|XP_019465241.1| PREDICTED: sm-like protein LSM3B [Lupinus an...   135   2e-38
ref|XP_022773387.1| sm-like protein LSM3B [Durio zibethinus]          135   2e-38
gb|AFK35032.1| unknown [Lotus japonicus] >gi|388511495|gb|AFK438...   135   2e-38
gb|KZV16527.1| hypothetical protein F511_11359 [Dorcoceras hygro...   135   2e-38
ref|XP_004290522.1| PREDICTED: sm-like protein LSM3B [Fragaria v...   135   2e-38
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin...   135   2e-38
ref|XP_003607812.1| u6 snRNA-associated-like-Smprotein [Medicago...   135   2e-38
ref|XP_004513701.1| PREDICTED: sm-like protein LSM3A [Cicer arie...   135   2e-38
dbj|GAU51075.1| hypothetical protein TSUD_291110 [Trifolium subt...   135   2e-38

>ref|XP_012829497.1| PREDICTED: sm-like protein LSM3A [Erythranthe guttata]
          Length = 97

 Score =  139 bits (350), Expect = 5e-40
 Identities = 68/69 (98%), Positives = 69/69 (100%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           RHDRELRGKLHAYDQHLNMILGDVEEIIT+VEIDDETYEEIVRTTKRTVPFLFVRGDGVI
Sbjct: 29  RHDRELRGKLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 88

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 89  LVSPPLRTA 97


>ref|XP_022854862.1| sm-like protein LSM3A isoform X2 [Olea europaea var. sylvestris]
 ref|XP_022894278.1| sm-like protein LSM3A [Olea europaea var. sylvestris]
          Length = 97

 Score =  139 bits (349), Expect = 8e-40
 Identities = 67/69 (97%), Positives = 69/69 (100%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           RHDRELRGKLHAYDQHLNMILGDVEEI+TSVEIDDETYEEIVRTT+RTVPFLFVRGDGVI
Sbjct: 29  RHDRELRGKLHAYDQHLNMILGDVEEIVTSVEIDDETYEEIVRTTRRTVPFLFVRGDGVI 88

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 89  LVSPPLRTA 97


>ref|XP_012839233.1| PREDICTED: sm-like protein LSM3A [Erythranthe guttata]
 ref|XP_012839234.1| PREDICTED: sm-like protein LSM3A [Erythranthe guttata]
 gb|EYU36853.1| hypothetical protein MIMGU_mgv1a017018mg [Erythranthe guttata]
 gb|EYU36854.1| hypothetical protein MIMGU_mgv1a017018mg [Erythranthe guttata]
          Length = 97

 Score =  139 bits (349), Expect = 8e-40
 Identities = 67/69 (97%), Positives = 69/69 (100%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           RHDRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVI
Sbjct: 29  RHDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 88

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 89  LVSPPLRTA 97


>ref|XP_020083900.1| sm-like protein LSM3A [Ananas comosus]
 gb|OAY70168.1| Sm-like protein LSM3B [Ananas comosus]
 gb|OAY72633.1| Sm-like protein LSM3B [Ananas comosus]
          Length = 97

 Score =  137 bits (345), Expect = 3e-39
 Identities = 65/69 (94%), Positives = 69/69 (100%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           RHDRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTT+RT+PFLFVRGDGVI
Sbjct: 29  RHDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTIPFLFVRGDGVI 88

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 89  LVSPPLRTA 97


>gb|EYU17441.1| hypothetical protein MIMGU_mgv1a015297mg [Erythranthe guttata]
          Length = 162

 Score =  139 bits (350), Expect = 4e-39
 Identities = 68/69 (98%), Positives = 69/69 (100%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           RHDRELRGKLHAYDQHLNMILGDVEEIIT+VEIDDETYEEIVRTTKRTVPFLFVRGDGVI
Sbjct: 94  RHDRELRGKLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 153

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 154 LVSPPLRTA 162


>ref|XP_011074758.1| sm-like protein LSM3A [Sesamum indicum]
          Length = 98

 Score =  137 bits (344), Expect = 4e-39
 Identities = 66/69 (95%), Positives = 69/69 (100%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           RHDRELRGKLHAYDQHLNMILGDVEEIIT++EIDDETYEEIVRTT+RTVPFLFVRGDGVI
Sbjct: 29  RHDRELRGKLHAYDQHLNMILGDVEEIITTMEIDDETYEEIVRTTRRTVPFLFVRGDGVI 88

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 89  LVSPPLRTA 97


>gb|PIM99001.1| Small nuclear ribonucleoprotein (snRNP) LSM3 [Handroanthus
           impetiginosus]
          Length = 97

 Score =  136 bits (343), Expect = 6e-39
 Identities = 65/69 (94%), Positives = 69/69 (100%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           RHDRELRGKLHAYDQHLNMILGDVEEI+T++EIDDETYEEIVRTT+RTVPFLFVRGDGVI
Sbjct: 29  RHDRELRGKLHAYDQHLNMILGDVEEIVTTMEIDDETYEEIVRTTRRTVPFLFVRGDGVI 88

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 89  LVSPPLRTA 97


>ref|XP_011101520.1| sm-like protein LSM3A [Sesamum indicum]
          Length = 97

 Score =  136 bits (343), Expect = 6e-39
 Identities = 65/69 (94%), Positives = 69/69 (100%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           RHDRELRGKLHAYDQHLNMILGDVEEI+T++EIDDETYEEIVRTT+RTVPFLFVRGDGVI
Sbjct: 29  RHDRELRGKLHAYDQHLNMILGDVEEIVTTLEIDDETYEEIVRTTRRTVPFLFVRGDGVI 88

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 89  LVSPPLRTA 97


>emb|CDP11392.1| unnamed protein product [Coffea canephora]
          Length = 98

 Score =  136 bits (343), Expect = 6e-39
 Identities = 65/69 (94%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           RHDRELRGKLHAYDQHLNMILGDVEE++T+VEIDDETYEEIVRTTKR VPFLFVRGDGVI
Sbjct: 30  RHDRELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETYEEIVRTTKRNVPFLFVRGDGVI 89

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 90  LVSPPLRTA 98


>gb|KHN15430.1| U6 snRNA-associated Sm-like protein LSm3 [Glycine soja]
 gb|KRH70311.1| hypothetical protein GLYMA_02G082300 [Glycine max]
          Length = 97

 Score =  135 bits (341), Expect = 1e-38
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           R DRELRGKLHAYDQHLNMILGDVEEIIT+VEIDDETYEEIVRTTKRTVPFLFVRGDGVI
Sbjct: 29  RSDRELRGKLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 88

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 89  LVSPPLRTA 97


>ref|XP_009402631.1| PREDICTED: sm-like protein LSM3B [Musa acuminata subsp.
           malaccensis]
          Length = 97

 Score =  135 bits (341), Expect = 1e-38
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           R DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTT+RTVPFLFVRGDGVI
Sbjct: 29  RSDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTRRTVPFLFVRGDGVI 88

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 89  LVSPPLRTA 97


>ref|XP_019465241.1| PREDICTED: sm-like protein LSM3B [Lupinus angustifolius]
 gb|OIV98878.1| hypothetical protein TanjilG_21709 [Lupinus angustifolius]
          Length = 96

 Score =  135 bits (340), Expect = 2e-38
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           R DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVI
Sbjct: 28  RSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 87

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 88  LVSPPLRTA 96


>ref|XP_022773387.1| sm-like protein LSM3B [Durio zibethinus]
          Length = 97

 Score =  135 bits (340), Expect = 2e-38
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           R DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVI
Sbjct: 29  RSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 88

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 89  LVSPPLRTA 97


>gb|AFK35032.1| unknown [Lotus japonicus]
 gb|AFK43809.1| unknown [Lotus japonicus]
          Length = 97

 Score =  135 bits (340), Expect = 2e-38
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           R DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVI
Sbjct: 29  RSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 88

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 89  LVSPPLRTA 97


>gb|KZV16527.1| hypothetical protein F511_11359 [Dorcoceras hygrometricum]
          Length = 97

 Score =  135 bits (340), Expect = 2e-38
 Identities = 65/69 (94%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           RHDRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTT+R VPFLFVRGDGVI
Sbjct: 29  RHDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRMVPFLFVRGDGVI 88

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 89  LVSPPLRTA 97


>ref|XP_004290522.1| PREDICTED: sm-like protein LSM3B [Fragaria vesca subsp. vesca]
 ref|XP_024162124.1| sm-like protein LSM3B [Rosa chinensis]
 gb|PRQ24723.1| putative sm-like protein Lsm3 [Rosa chinensis]
          Length = 97

 Score =  135 bits (340), Expect = 2e-38
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           R DRELRGKLHAYDQHLNMILGDVEEI+TSVEIDDETYEEIVRTTKRTVP+LFVRGDGVI
Sbjct: 29  RSDRELRGKLHAYDQHLNMILGDVEEIVTSVEIDDETYEEIVRTTKRTVPYLFVRGDGVI 88

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 89  LVSPPLRTA 97


>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
 ref|XP_014506299.1| sm-like protein LSM3A [Vigna radiata var. radiata]
 ref|XP_017438868.1| PREDICTED: sm-like protein LSM3A [Vigna angularis]
 ref|XP_020238104.1| sm-like protein LSM3A [Cajanus cajan]
 gb|ACU13588.1| unknown [Glycine max]
 gb|KHN41267.1| U6 snRNA-associated Sm-like protein LSm3 [Glycine soja]
 gb|KOM55421.1| hypothetical protein LR48_Vigan10g131300 [Vigna angularis]
 gb|KRH08702.1| hypothetical protein GLYMA_16G167900 [Glycine max]
 dbj|BAU02053.1| hypothetical protein VIGAN_11146700 [Vigna angularis var.
           angularis]
 gb|KYP43948.1| U6 snRNA-associated Sm-like protein LSm3 [Cajanus cajan]
 gb|PON76226.1| LSM domain/archaea-type [Parasponia andersonii]
 gb|PON83050.1| LSM domain/archaea-type [Trema orientalis]
          Length = 97

 Score =  135 bits (340), Expect = 2e-38
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           R DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVI
Sbjct: 29  RSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 88

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 89  LVSPPLRTA 97


>ref|XP_003607812.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
 gb|AES90009.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
          Length = 98

 Score =  135 bits (340), Expect = 2e-38
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           R DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVI
Sbjct: 30  RSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 89

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 90  LVSPPLRTA 98


>ref|XP_004513701.1| PREDICTED: sm-like protein LSM3A [Cicer arietinum]
          Length = 98

 Score =  135 bits (340), Expect = 2e-38
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           R DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVI
Sbjct: 30  RSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 89

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 90  LVSPPLRTA 98


>dbj|GAU51075.1| hypothetical protein TSUD_291110 [Trifolium subterraneum]
          Length = 101

 Score =  135 bits (340), Expect = 2e-38
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   RHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 180
           R DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVI
Sbjct: 30  RSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVI 89

Query: 181 LVSPPLRTA 207
           LVSPPLRTA
Sbjct: 90  LVSPPLRTA 98