BLASTX nr result
ID: Rehmannia29_contig00009402
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00009402
(1523 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011086178.1| RNA pseudouridine synthase 6, chloroplastic ... 776 0.0
gb|PIM98024.1| RNA pseudouridylate synthase [Handroanthus impeti... 757 0.0
ref|XP_012841998.1| PREDICTED: RNA pseudouridine synthase 6, chl... 746 0.0
ref|XP_022878012.1| RNA pseudouridine synthase 6, chloroplastic ... 694 0.0
ref|XP_022878009.1| RNA pseudouridine synthase 6, chloroplastic ... 687 0.0
ref|XP_023922473.1| RNA pseudouridine synthase 6, chloroplastic ... 667 0.0
ref|XP_019078311.1| PREDICTED: RNA pseudouridine synthase 6, chl... 665 0.0
ref|XP_006449066.1| RNA pseudouridine synthase 6, chloroplastic ... 664 0.0
ref|XP_018833481.1| PREDICTED: RNA pseudouridine synthase 6, chl... 664 0.0
ref|XP_008224796.1| PREDICTED: RNA pseudouridine synthase 6, chl... 661 0.0
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl... 661 0.0
ref|XP_007213527.1| RNA pseudouridine synthase 6, chloroplastic ... 660 0.0
ref|XP_021821499.1| RNA pseudouridine synthase 6, chloroplastic ... 659 0.0
ref|XP_022720602.1| RNA pseudouridine synthase 6, chloroplastic-... 657 0.0
gb|OMO76757.1| Pseudouridine synthase, RsuA/RluB/C/D/E/F [Corcho... 657 0.0
ref|XP_010267715.1| PREDICTED: RNA pseudouridine synthase 6, chl... 655 0.0
ref|XP_002304926.2| pseudouridine synthase family protein [Popul... 654 0.0
ref|XP_021597321.1| RNA pseudouridine synthase 6, chloroplastic ... 654 0.0
gb|PNT39135.1| hypothetical protein POPTR_004G019100v3 [Populus ... 653 0.0
ref|XP_019223734.1| PREDICTED: RNA pseudouridine synthase 6, chl... 652 0.0
>ref|XP_011086178.1| RNA pseudouridine synthase 6, chloroplastic [Sesamum indicum]
Length = 484
Score = 776 bits (2005), Expect = 0.0
Identities = 370/455 (81%), Positives = 397/455 (87%)
Frame = -3
Query: 1371 RRNFFIPINLARTLASTHSPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXXXSY 1192
RRNFF INLARTLA+T+ FK+IHKHH + A RNLSCE SY
Sbjct: 30 RRNFFTHINLARTLAATNCRFKNIHKHHTLIAGKRNLSCESTASADISTNSSIHISNNSY 89
Query: 1191 PPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCP 1012
PPYGRLLPCPSQ GPPRVEHLVVS+GGPVLE+IS +LNLPPLFVADLIHFGAVFYALVCP
Sbjct: 90 PPYGRLLPCPSQNGPPRVEHLVVSKGGPVLEYISSALNLPPLFVADLIHFGAVFYALVCP 149
Query: 1011 DPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVHV 832
DPP SATPEQIK FK++TDP +LR+R+SIKGKT+REAQKTFRIT PDEFVE GTYLRVHV
Sbjct: 150 DPPPSATPEQIKTFKEFTDPSVLRKRASIKGKTVREAQKTFRITRPDEFVEAGTYLRVHV 209
Query: 831 HPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAPL 652
HPKRFPRCYEIDWRSRI+AVT+ YV+LDKPAGTSVGGTTDNIEESCATFATRALGL APL
Sbjct: 210 HPKRFPRCYEIDWRSRIVAVTDDYVILDKPAGTSVGGTTDNIEESCATFATRALGLDAPL 269
Query: 651 RTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPVN 472
RTTHQIDNCTEGCVVLARTKEYCSVFHGKIRE APVS+GVITHYMRPVN
Sbjct: 270 RTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVSLGVITHYMRPVN 329
Query: 471 IAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLLT 292
IAPRLIS +FI+GW LCQLEVLECRKVPWPN I+EEKN+IEDCGWP+KDFAYEC+INLLT
Sbjct: 330 IAPRLISGEFINGWHLCQLEVLECRKVPWPNRIIEEKNSIEDCGWPSKDFAYECEINLLT 389
Query: 291 GRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEWI 112
GRTHQIR QLAACGAPLVGDS YMPAA+AEAN PGLNPFGKNKKEY+ DD K LA+EEWI
Sbjct: 390 GRTHQIRAQLAACGAPLVGDSMYMPAAVAEANSPGLNPFGKNKKEYSSDDVKVLAVEEWI 449
Query: 111 AHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
AHHGKEPSVAIGLQAC ISWDDGEH+YEAG PWWR
Sbjct: 450 AHHGKEPSVAIGLQACQISWDDGEHTYEAGCPWWR 484
>gb|PIM98024.1| RNA pseudouridylate synthase [Handroanthus impetiginosus]
Length = 481
Score = 757 bits (1955), Expect = 0.0
Identities = 364/455 (80%), Positives = 389/455 (85%)
Frame = -3
Query: 1371 RRNFFIPINLARTLASTHSPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXXXSY 1192
RR+F+ INL+RTL+ST K IHKHH AV RNLSCE SY
Sbjct: 27 RRSFYTSINLSRTLSSTLYGLKTIHKHHSFIAVNRNLSCESTACADVSTNSSNPTSNNSY 86
Query: 1191 PPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCP 1012
PPYGRLLPCPS+ GPPRVEHLVVSEGGPVLE++SKSLNLP LFVADLIHFGAVFYALVCP
Sbjct: 87 PPYGRLLPCPSENGPPRVEHLVVSEGGPVLEYVSKSLNLPSLFVADLIHFGAVFYALVCP 146
Query: 1011 DPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVHV 832
D P +ATPEQIK FKKYTDP +LR+RSSIKGKTIREAQKTFRIT +EFVE GTYLRVHV
Sbjct: 147 DLPPTATPEQIKLFKKYTDPSVLRKRSSIKGKTIREAQKTFRITHTNEFVEAGTYLRVHV 206
Query: 831 HPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAPL 652
HPKRFPRCYEIDWRSRIIAVTE+YVVLDKPAGTSVGGTTDNIEESCATFATRA GL+APL
Sbjct: 207 HPKRFPRCYEIDWRSRIIAVTENYVVLDKPAGTSVGGTTDNIEESCATFATRAFGLEAPL 266
Query: 651 RTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPVN 472
RTTHQIDNCTEGCVVLARTKEYCSVFHGKIRE AP+ +GVITHYMRPVN
Sbjct: 267 RTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYFALAAAPIPVGVITHYMRPVN 326
Query: 471 IAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLLT 292
IAPRL+SEDFI+GW LCQLEVLEC K+PWPN+I E+K +IEDCGWP+KDFAYECKINLLT
Sbjct: 327 IAPRLVSEDFINGWHLCQLEVLECNKIPWPNNITEKKYSIEDCGWPSKDFAYECKINLLT 386
Query: 291 GRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEWI 112
GRTHQIR QLAAC APLVGDS YMPA IAEANCPGLNPFGKNKKEY DD KA A+EEWI
Sbjct: 387 GRTHQIRVQLAACSAPLVGDSMYMPAVIAEANCPGLNPFGKNKKEYLSDDVKAAAVEEWI 446
Query: 111 AHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
A HGKEP+VAIGLQAC ISWDDGEH+YEAGSPWWR
Sbjct: 447 ACHGKEPTVAIGLQACQISWDDGEHNYEAGSPWWR 481
>ref|XP_012841998.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Erythranthe
guttata]
gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Erythranthe guttata]
Length = 483
Score = 746 bits (1927), Expect = 0.0
Identities = 360/458 (78%), Positives = 384/458 (83%), Gaps = 3/458 (0%)
Frame = -3
Query: 1371 RRNFFIPINLARTLASTHSPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXXXS- 1195
RRNFFIPINLARTLAST S F+HIHKHH+ NA RN SCE +
Sbjct: 26 RRNFFIPINLARTLASTQSSFRHIHKHHICNAAHRNRSCESTASAYVSTDSSISTSNNNS 85
Query: 1194 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 1015
YPPYGRLLPCPSQ GPPRVEH VV+EGGPVL++ISKSLN+P FVADLIHFGAVFYALVC
Sbjct: 86 YPPYGRLLPCPSQNGPPRVEHFVVTEGGPVLDYISKSLNIPSPFVADLIHFGAVFYALVC 145
Query: 1014 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 835
PDPP +ATPEQI FK+YTDP LLR+RSSIKGKT REAQKTFRI+ DEFVETGTYLRVH
Sbjct: 146 PDPPPTATPEQINFFKEYTDPSLLRKRSSIKGKTFREAQKTFRISRTDEFVETGTYLRVH 205
Query: 834 VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAP 655
VHPKRFPRCYE DWRSR+IAV ESYVVLDKPAGTSVGGTTDNIEESC TF TRALGL+AP
Sbjct: 206 VHPKRFPRCYETDWRSRVIAVAESYVVLDKPAGTSVGGTTDNIEESCVTFTTRALGLEAP 265
Query: 654 LRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPV 475
L TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE APVSIGVITHYMRPV
Sbjct: 266 LITTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVSIGVITHYMRPV 325
Query: 474 NIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLL 295
NIAPRL+SED ++GW LCQLEVLECRK+PWP+SI EEKN +EDCGWP+KDFAYECK+NLL
Sbjct: 326 NIAPRLVSEDLVNGWHLCQLEVLECRKIPWPSSIAEEKNRVEDCGWPSKDFAYECKVNLL 385
Query: 294 TGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEW 115
TGRTHQIR Q AACGAPLVGDS YMPAAIAE + P LNPFGKNKKEY DD KA+A+EEW
Sbjct: 386 TGRTHQIRAQFAACGAPLVGDSMYMPAAIAEVDRPELNPFGKNKKEYASDDIKAVAVEEW 445
Query: 114 IAHHGKEPSVAIGLQACHISWDDGE--HSYEAGSPWWR 7
IA HGKEP VAIGLQAC ISWD E HSYEAG PWWR
Sbjct: 446 IARHGKEPIVAIGLQACKISWDSDEEQHSYEAGRPWWR 483
>ref|XP_022878012.1| RNA pseudouridine synthase 6, chloroplastic isoform X2 [Olea europaea
var. sylvestris]
Length = 481
Score = 694 bits (1791), Expect = 0.0
Identities = 337/455 (74%), Positives = 369/455 (81%)
Frame = -3
Query: 1371 RRNFFIPINLARTLASTHSPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXXXSY 1192
R N PINL RTLA T + FK+ +H N R+ SCE Y
Sbjct: 28 RGNLITPINLVRTLAFT-ALFKNTRRHQTFNNRNRSFSCESSAATDISSTSSTSLSNNGY 86
Query: 1191 PPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCP 1012
P Y RLLPCPS GPPRVEHLVVSEGG VLE+I ++L+LPPLFVADLIHFGAVFYALVCP
Sbjct: 87 PIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQALSLPPLFVADLIHFGAVFYALVCP 146
Query: 1011 DPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVHV 832
DPP +ATPEQIK +K+ T+P +LR R+SIKGKTIREAQKTFRIT DEFVE GTYLRVHV
Sbjct: 147 DPPPNATPEQIKVYKEVTNPSVLRTRASIKGKTIREAQKTFRITRIDEFVEAGTYLRVHV 206
Query: 831 HPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAPL 652
HPKRFPRCYEIDWRSRIIAVT+SYVVLDKPAGTSVGGTTDNIEESC TFA+RALGL APL
Sbjct: 207 HPKRFPRCYEIDWRSRIIAVTDSYVVLDKPAGTSVGGTTDNIEESCVTFASRALGLDAPL 266
Query: 651 RTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPVN 472
RTTHQIDNCTEGCVVL+RTKEYCSVFHGKIRE PVSIGVITHYMRP+N
Sbjct: 267 RTTHQIDNCTEGCVVLSRTKEYCSVFHGKIREKKVKKLYLALAADPVSIGVITHYMRPIN 326
Query: 471 IAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLLT 292
IAPRL+SEDF+ GW LC+LEVLEC+KVPWP+++ E+K +IEDCGWP KDFAYECKI+LLT
Sbjct: 327 IAPRLVSEDFVKGWYLCRLEVLECKKVPWPDALTEKKYSIEDCGWPGKDFAYECKIDLLT 386
Query: 291 GRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEWI 112
GRTHQIR QLAACGAPLVGDS YMPAAIAE PGLNPFGK KK Y ++ K L +EEWI
Sbjct: 387 GRTHQIRAQLAACGAPLVGDSMYMPAAIAEMRKPGLNPFGKYKKAYATENDKELHVEEWI 446
Query: 111 AHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
A HGKEPSVAIGLQAC ISWD+GEH YEA SPWWR
Sbjct: 447 ACHGKEPSVAIGLQACQISWDEGEHVYEARSPWWR 481
>ref|XP_022878009.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Olea europaea
var. sylvestris]
ref|XP_022878010.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Olea europaea
var. sylvestris]
ref|XP_022878011.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Olea europaea
var. sylvestris]
Length = 489
Score = 687 bits (1772), Expect = 0.0
Identities = 337/463 (72%), Positives = 369/463 (79%), Gaps = 8/463 (1%)
Frame = -3
Query: 1371 RRNFFIPINLARTLASTHSPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXXXSY 1192
R N PINL RTLA T + FK+ +H N R+ SCE Y
Sbjct: 28 RGNLITPINLVRTLAFT-ALFKNTRRHQTFNNRNRSFSCESSAATDISSTSSTSLSNNGY 86
Query: 1191 PPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCP 1012
P Y RLLPCPS GPPRVEHLVVSEGG VLE+I ++L+LPPLFVADLIHFGAVFYALVCP
Sbjct: 87 PIYSRLLPCPSHNGPPRVEHLVVSEGGSVLEYICQALSLPPLFVADLIHFGAVFYALVCP 146
Query: 1011 DPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVHV 832
DPP +ATPEQIK +K+ T+P +LR R+SIKGKTIREAQKTFRIT DEFVE GTYLRVHV
Sbjct: 147 DPPPNATPEQIKVYKEVTNPSVLRTRASIKGKTIREAQKTFRITRIDEFVEAGTYLRVHV 206
Query: 831 HPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAPL 652
HPKRFPRCYEIDWRSRIIAVT+SYVVLDKPAGTSVGGTTDNIEESC TFA+RALGL APL
Sbjct: 207 HPKRFPRCYEIDWRSRIIAVTDSYVVLDKPAGTSVGGTTDNIEESCVTFASRALGLDAPL 266
Query: 651 RTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPVN 472
RTTHQIDNCTEGCVVL+RTKEYCSVFHGKIRE PVSIGVITHYMRP+N
Sbjct: 267 RTTHQIDNCTEGCVVLSRTKEYCSVFHGKIREKKVKKLYLALAADPVSIGVITHYMRPIN 326
Query: 471 IAPRLISE--------DFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAY 316
IAPRL+SE DF+ GW LC+LEVLEC+KVPWP+++ E+K +IEDCGWP KDFAY
Sbjct: 327 IAPRLVSEVKPDVVQPDFVKGWYLCRLEVLECKKVPWPDALTEKKYSIEDCGWPGKDFAY 386
Query: 315 ECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAK 136
ECKI+LLTGRTHQIR QLAACGAPLVGDS YMPAAIAE PGLNPFGK KK Y ++ K
Sbjct: 387 ECKIDLLTGRTHQIRAQLAACGAPLVGDSMYMPAAIAEMRKPGLNPFGKYKKAYATENDK 446
Query: 135 ALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
L +EEWIA HGKEPSVAIGLQAC ISWD+GEH YEA SPWWR
Sbjct: 447 ELHVEEWIACHGKEPSVAIGLQACQISWDEGEHVYEARSPWWR 489
>ref|XP_023922473.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Quercus
suber]
ref|XP_023922474.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Quercus
suber]
ref|XP_023922475.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Quercus
suber]
ref|XP_023922476.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Quercus
suber]
ref|XP_023922477.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Quercus
suber]
ref|XP_023922479.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Quercus
suber]
gb|POE97925.1| rna pseudouridine synthase 6, chloroplastic [Quercus suber]
Length = 478
Score = 667 bits (1721), Expect = 0.0
Identities = 325/458 (70%), Positives = 363/458 (79%), Gaps = 4/458 (0%)
Frame = -3
Query: 1368 RNFFIPINLARTLASTHSPF-KHIHKHHVVNAVGRNLS---CEXXXXXXXXXXXXXXXXX 1201
R+ P+ L RTLA TH K H H+V A N+S CE
Sbjct: 19 RSISPPVTLVRTLAPTHVALSKKHHNKHLVAAWSSNISAFACESSKSDVIHAATTTSVNG 78
Query: 1200 XSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYAL 1021
YP Y RLLPCPS GPPR+EHLVVS+GGPV E+I K+L+LP LFVADLIHFGAV+YAL
Sbjct: 79 --YPEYHRLLPCPSDNGPPRIEHLVVSKGGPVQEYICKALDLPALFVADLIHFGAVYYAL 136
Query: 1020 VCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLR 841
VCP PP SAT EQI+ FK++T P +LR+R+SIKGKTIREAQKTFRIT D+FVE GTYLR
Sbjct: 137 VCPKPPPSATEEQIRIFKEFTAPSVLRKRASIKGKTIREAQKTFRITHVDQFVEAGTYLR 196
Query: 840 VHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQ 661
VHVHPKRFPRCYEIDW+SRIIAV+ESYVVLDKPAGTSVGGTTDNIEESCATFATRALGL
Sbjct: 197 VHVHPKRFPRCYEIDWKSRIIAVSESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLT 256
Query: 660 APLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMR 481
PL+TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE APV IG+I HYMR
Sbjct: 257 TPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYIALAAAPVPIGIIAHYMR 316
Query: 480 PVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKIN 301
P+N+APRLISEDFI GW LCQLEVLEC++VPWPN+++E+K +EDCGWP++ AYECKIN
Sbjct: 317 PINMAPRLISEDFIKGWNLCQLEVLECKEVPWPNAVIEKKYCVEDCGWPSQHIAYECKIN 376
Query: 300 LLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIE 121
LLTGRTHQIR QLAAC APLVGDS YMPAAIAE PGLNPFGK K+ YT + +A+A+
Sbjct: 377 LLTGRTHQIRAQLAACSAPLVGDSMYMPAAIAEMRSPGLNPFGKYKQNYTSETDEAMAVT 436
Query: 120 EWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
EWI HGKEP+V IGLQAC ISWDDGEH YEAGSPWWR
Sbjct: 437 EWIEQHGKEPNVVIGLQACQISWDDGEHMYEAGSPWWR 474
>ref|XP_019078311.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Vitis vinifera]
emb|CBI23187.3| unnamed protein product, partial [Vitis vinifera]
Length = 472
Score = 665 bits (1717), Expect = 0.0
Identities = 329/453 (72%), Positives = 366/453 (80%)
Frame = -3
Query: 1368 RNFFIPINLARTLASTHSPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXXXSYP 1189
R+F P+ LARTLAS++ F HK V N +C YP
Sbjct: 24 RSFGTPVALARTLASSNV-FSRRHKRVVW--CSNNPTCTRELTASSDSANTSSVNG--YP 78
Query: 1188 PYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCPD 1009
Y RLLPCPSQ GPPRVEHLVVSEGG VL++ISK+L+LPPLFVADLIHFGAV+YALVCP+
Sbjct: 79 EYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPLFVADLIHFGAVYYALVCPE 138
Query: 1008 PPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVHVH 829
PP SATPEQ++ FK+ T P +LR+R SIKGKTIREAQKTFRIT +EFVE GTYLRVHVH
Sbjct: 139 PPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVEAGTYLRVHVH 198
Query: 828 PKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAPLR 649
PKRFPRCYEIDW+SRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGL PLR
Sbjct: 199 PKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTTPLR 258
Query: 648 TTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPVNI 469
TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE AP+ IG++THYMRPVNI
Sbjct: 259 TTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAPMPIGIVTHYMRPVNI 318
Query: 468 APRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLLTG 289
APRLISEDFI GW LCQLEVLEC++VPWP++++EEK IED GWP K+ A++CKINLLTG
Sbjct: 319 APRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWPLKNSAFKCKINLLTG 378
Query: 288 RTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEWIA 109
RTHQIR QLAACGAP+VGDS YMPAAIAE PGLNPFGK KK+YT ++ + A+ EWIA
Sbjct: 379 RTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKYTTENDRETAVAEWIA 438
Query: 108 HHGKEPSVAIGLQACHISWDDGEHSYEAGSPWW 10
HGKEP VAIGLQAC ISWDDGEH Y+AGSPWW
Sbjct: 439 QHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 471
>ref|XP_006449066.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Citrus
clementina]
ref|XP_024046024.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Citrus
clementina]
gb|ESR62306.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
Length = 487
Score = 664 bits (1714), Expect = 0.0
Identities = 322/464 (69%), Positives = 372/464 (80%), Gaps = 10/464 (2%)
Frame = -3
Query: 1368 RNFFIPINLARTLASTH-SPFKHIHKHHVV---NAVGRNLSCEXXXXXXXXXXXXXXXXX 1201
R+ P++L RTLASTH S ++I+K +VV ++ RN CE
Sbjct: 15 RSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTHTDTTATAA 74
Query: 1200 XS------YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFG 1039
+ YP Y RLLPCPSQ PPRVEHLVVSEGGPVLE+I + LNLPPLFVADLIHFG
Sbjct: 75 AATPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFG 134
Query: 1038 AVFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVE 859
AV+YALVCP PP +ATPEQ++ FK+ TDP +L +RSSIKGKT+REAQKTFRIT D+ VE
Sbjct: 135 AVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVE 194
Query: 858 TGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFAT 679
GTYLRVHVHPKRFPRCY+IDW+SRIIAVTES+VVLDKPAGTSVGGTTDNIEESCATFA+
Sbjct: 195 AGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFAS 254
Query: 678 RALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGV 499
RALGL PLRTTHQIDNCTEGCVVLART+EYCS+FH KIRE AP+ +G+
Sbjct: 255 RALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAPLPVGI 314
Query: 498 ITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFA 319
+THYMRP+NIAPRLISEDFI GW LCQLEV+EC+KVPWP++ + + +IEDCGWP++D+A
Sbjct: 315 MTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWPSRDYA 374
Query: 318 YECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDA 139
YECKI LLTGRTHQ+R QLAACGAP+VGDS YMPAAIA+ + PGLNPFGK +KEY DD
Sbjct: 375 YECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEYASDDD 434
Query: 138 KALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
K +A+ EWI+ HGKEPSVAIGLQACHISWDDGE YEA SPWWR
Sbjct: 435 KEMAVIEWISQHGKEPSVAIGLQACHISWDDGECCYEARSPWWR 478
>ref|XP_018833481.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Juglans regia]
Length = 477
Score = 664 bits (1712), Expect = 0.0
Identities = 327/464 (70%), Positives = 364/464 (78%), Gaps = 10/464 (2%)
Frame = -3
Query: 1368 RNFFIPINLARTLASTHSPF-KHIHKHHVV---------NAVGRNLSCEXXXXXXXXXXX 1219
R+F +P+ L RTLA+TH+ F KH HV + GR +C
Sbjct: 15 RSFSLPMALVRTLATTHAAFGKHYDNKHVTAWSSSSGCSQSNGRVFACASSSSGVTTAAA 74
Query: 1218 XXXXXXXSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFG 1039
YP Y RLLPCPSQ GPPRVEHLVVSEG PVLE+I K+L+LPPLFVADLIHFG
Sbjct: 75 AKC-----YPEYDRLLPCPSQNGPPRVEHLVVSEGVPVLEYICKALDLPPLFVADLIHFG 129
Query: 1038 AVFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVE 859
AV+YALVCP PP SATPEQI+ F++ T P +LR+R+SIKGKTIREAQKTFRIT +FVE
Sbjct: 130 AVYYALVCPKPPPSATPEQIRIFEEVTAPSVLRKRASIKGKTIREAQKTFRITHIHQFVE 189
Query: 858 TGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFAT 679
GTYLRVHVHPKRFPRCYEIDW+SRIIAV ESYVVLDKPAGTSVGGTTDNIEESCATFAT
Sbjct: 190 AGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCATFAT 249
Query: 678 RALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGV 499
RALGL PL TTHQIDNCTEGCV+LARTK+YCSVFHGKIRE A V IGV
Sbjct: 250 RALGLTTPLLTTHQIDNCTEGCVLLARTKDYCSVFHGKIREKKVKKLYLALAAASVPIGV 309
Query: 498 ITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFA 319
ITHYMRP+N+APRLISEDFI GW CQLEVLEC++VPWPN+++E + IEDCGWP+ D A
Sbjct: 310 ITHYMRPINMAPRLISEDFIKGWNFCQLEVLECKEVPWPNAVIENQYCIEDCGWPSNDIA 369
Query: 318 YECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDA 139
YECKINLLTGRTHQIR QLAACGAPLVGDS YMPAAIAE N PGLNPFGK KK Y +
Sbjct: 370 YECKINLLTGRTHQIRAQLAACGAPLVGDSMYMPAAIAEMNNPGLNPFGKYKKHYASETD 429
Query: 138 KALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
+A+A+ EWI+ HGKEP VAIGLQAC ISWD+GE Y+AGSPWWR
Sbjct: 430 EAMAVMEWISRHGKEPKVAIGLQACQISWDEGELMYKAGSPWWR 473
>ref|XP_008224796.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Prunus mume]
Length = 469
Score = 661 bits (1706), Expect = 0.0
Identities = 313/461 (67%), Positives = 364/461 (78%), Gaps = 7/461 (1%)
Frame = -3
Query: 1368 RNFFIPINLARTLASTH-------SPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXX 1210
R+F P+ L RTLA TH + +KH+ + + +
Sbjct: 7 RSFSAPVALVRTLALTHVALSEHANNYKHVKVACFSRSSKKRTTFACKSLKQDVTQPTAV 66
Query: 1209 XXXXSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVF 1030
YP Y RLLPCPS GPPRVEHLVVSEGGPVLE+I K+L+LPP FVADLIHFGAV+
Sbjct: 67 SSVNGYPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTLDLPPQFVADLIHFGAVY 126
Query: 1029 YALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGT 850
YALVCP PP +ATPEQ++ FK+ T+P +L++R+SIKGKT+REAQKTFRIT DEFVE GT
Sbjct: 127 YALVCPKPPPTATPEQMRVFKEVTEPSVLKKRASIKGKTVREAQKTFRITQADEFVEAGT 186
Query: 849 YLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRAL 670
YLRVHVHPKRFPRCYEIDW+SRIIAV+E +VVLDKPAGT+VGGTTDNIEESCATFATRAL
Sbjct: 187 YLRVHVHPKRFPRCYEIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESCATFATRAL 246
Query: 669 GLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITH 490
GL PL TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE APV G+ITH
Sbjct: 247 GLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVPTGIITH 306
Query: 489 YMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYEC 310
YMRP+N+APRLISEDFI W LCQLEV+EC++VPWPN+++EEK +EDCGWP+KD+AYEC
Sbjct: 307 YMRPINVAPRLISEDFIERWSLCQLEVMECKEVPWPNAVVEEKYCVEDCGWPSKDYAYEC 366
Query: 309 KINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKAL 130
KINLLTGRTHQ+R QLAACGAP+VGDS YMPAA+AE PGLNPFG+ KK YT ++ K
Sbjct: 367 KINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQYKKHYTTENDKET 426
Query: 129 AIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
A+ +WIA HGKEP+VAIGLQAC ISWDDG+H++EA +PWWR
Sbjct: 427 AVAKWIARHGKEPNVAIGLQACQISWDDGKHTFEARAPWWR 467
>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Citrus sinensis]
ref|XP_006468003.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Citrus sinensis]
Length = 487
Score = 661 bits (1706), Expect = 0.0
Identities = 320/464 (68%), Positives = 371/464 (79%), Gaps = 10/464 (2%)
Frame = -3
Query: 1368 RNFFIPINLARTLASTH-SPFKHIHKHHVV---NAVGRNLSCEXXXXXXXXXXXXXXXXX 1201
R+ P++L RTLASTH S ++I+K +VV ++ RN CE
Sbjct: 15 RSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTHTDTAAIAA 74
Query: 1200 XS------YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFG 1039
+ YP Y RLLPCPSQ PPRVEHLVVSEGGPVLE+I + LNLPPLFVADLIHFG
Sbjct: 75 ATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFG 134
Query: 1038 AVFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVE 859
AV+YALVCP PP +ATPEQ++ FK+ TDP +L +RSSIKGKT+REAQKTFRIT D+ VE
Sbjct: 135 AVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVE 194
Query: 858 TGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFAT 679
GTYLRVHVHPKRFPRCY+IDW SRIIAVTES+VVLDKPAGTSVGGTTDNIEESCATFA+
Sbjct: 195 AGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFAS 254
Query: 678 RALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGV 499
RALGL PLRTTHQIDNCTEGCVVLART+EYCS+FH KIRE AP+ +G+
Sbjct: 255 RALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTTAPLPVGI 314
Query: 498 ITHYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFA 319
+THYMRP+NIAPRL+SEDFI+GW LCQLEV+EC+KVPWP++ + + +IEDCGWP++D+A
Sbjct: 315 MTHYMRPINIAPRLVSEDFITGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWPSRDYA 374
Query: 318 YECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDA 139
YECKI LLTGRTHQ+R QLAACGAP+VGDS YMPAAIA+ + PGLNPFGK +KEY DD
Sbjct: 375 YECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEYASDDD 434
Query: 138 KALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
K +A+ EWI+ HG EPSVAIGLQACHISWDDGE YEA SPWWR
Sbjct: 435 KEMAVIEWISQHGMEPSVAIGLQACHISWDDGECCYEARSPWWR 478
>ref|XP_007213527.1| RNA pseudouridine synthase 6, chloroplastic [Prunus persica]
gb|ONI10035.1| hypothetical protein PRUPE_4G024200 [Prunus persica]
Length = 477
Score = 660 bits (1704), Expect = 0.0
Identities = 317/463 (68%), Positives = 365/463 (78%), Gaps = 9/463 (1%)
Frame = -3
Query: 1368 RNFFIPINLARTLASTH---SPFKHIHKHHVVNAVGRN------LSCEXXXXXXXXXXXX 1216
R+F P+ L RTLA TH S + +KH V R+ +CE
Sbjct: 15 RSFSAPVALVRTLALTHVALSEHANNYKHVKVACFSRSSKKRTTFACESLKQGVTQPTSV 74
Query: 1215 XXXXXXSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGA 1036
YP Y RLLPCPS GPPRVEHLVVSEGGPVLE+I K+L+LPP FVADLIHFGA
Sbjct: 75 SSVNG--YPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTLDLPPQFVADLIHFGA 132
Query: 1035 VFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVET 856
V+YALVCP PP +ATPEQ++ FK+ T P +L+ R+SIKGKT+REAQKTFRIT DEFVE
Sbjct: 133 VYYALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHADEFVEA 192
Query: 855 GTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATR 676
GTYLRVHVHPKRFPRCY+IDW+SRIIAV+E +VVLDKPAGT+VGGTTDNIEESCATFATR
Sbjct: 193 GTYLRVHVHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESCATFATR 252
Query: 675 ALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVI 496
ALGL PL TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE APV G+I
Sbjct: 253 ALGLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVPTGII 312
Query: 495 THYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAY 316
THYMRP+N+APRLISEDFI W LCQLEV+EC+++PWPN+++EEK +EDCGWP+KD+AY
Sbjct: 313 THYMRPINVAPRLISEDFIERWSLCQLEVMECKEIPWPNAVVEEKYCVEDCGWPSKDYAY 372
Query: 315 ECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAK 136
ECKINLLTGRTHQ+R QLAACGAP+VGDS YMPAA+AE PGLNPFG+ KK YT ++ K
Sbjct: 373 ECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQYKKHYTTENDK 432
Query: 135 ALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
A+ EWIA HGKEP+VAIGLQAC ISWDDG+H++EA +PWWR
Sbjct: 433 ETAVAEWIARHGKEPNVAIGLQACQISWDDGKHTFEARAPWWR 475
>ref|XP_021821499.1| RNA pseudouridine synthase 6, chloroplastic [Prunus avium]
Length = 477
Score = 659 bits (1699), Expect = 0.0
Identities = 318/463 (68%), Positives = 363/463 (78%), Gaps = 9/463 (1%)
Frame = -3
Query: 1368 RNFFIPINLARTLASTH---SPFKHIHKHHVVNAVGRN------LSCEXXXXXXXXXXXX 1216
RNF P+ L RTLA TH S + +KH V R+ +CE
Sbjct: 15 RNFSAPVALVRTLALTHVALSEHANNYKHVKVACFSRSSKKRTTFACESLKQDVTQPTAV 74
Query: 1215 XXXXXXSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGA 1036
YP Y RLLPCPS GPPRVEHLVVSEGGPVLE+I K+L+LPP FVADLIHFGA
Sbjct: 75 SSVNG--YPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTLDLPPQFVADLIHFGA 132
Query: 1035 VFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVET 856
V+YALVCP PP +ATPEQ++ FK+ T P +L+ R+SIKGKT+REAQKTFRIT DEFVE
Sbjct: 133 VYYALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITQADEFVEA 192
Query: 855 GTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATR 676
GTYLRVHVHPKRFPRCYEIDW+SRIIAV+E +VVLDKPAGT+VGGTTDNIEESCATFATR
Sbjct: 193 GTYLRVHVHPKRFPRCYEIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESCATFATR 252
Query: 675 ALGLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVI 496
ALGL PL TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE APV G+I
Sbjct: 253 ALGLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKVYLALAAAPVPTGII 312
Query: 495 THYMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAY 316
THYMRP+N+APRLISEDFI W LCQLEV+EC++VPWPN+++EEK +EDCGWP+KD+AY
Sbjct: 313 THYMRPINVAPRLISEDFIERWSLCQLEVMECKEVPWPNAVVEEKYCVEDCGWPSKDYAY 372
Query: 315 ECKINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAK 136
ECKINLLTGRTHQ+R QLAACGAP+VGDS YMPAA+AE PGLNPFG+ KK YT ++ K
Sbjct: 373 ECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQYKKHYTTENDK 432
Query: 135 ALAIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
A+ WIA HGKEP+VAIGLQAC ISWDD +H++EA +PWWR
Sbjct: 433 ETAVAGWIARHGKEPNVAIGLQACQISWDDEKHTFEARAPWWR 475
>ref|XP_022720602.1| RNA pseudouridine synthase 6, chloroplastic-like [Durio zibethinus]
Length = 479
Score = 657 bits (1695), Expect = 0.0
Identities = 325/457 (71%), Positives = 363/457 (79%), Gaps = 8/457 (1%)
Frame = -3
Query: 1353 PINLARTLASTHSPFKHIH-----KHHVVNAVG---RNLSCEXXXXXXXXXXXXXXXXXX 1198
P+ L R LAST+ H H K V++ + R LSC
Sbjct: 23 PVPLLRMLASTNVSALHRHDKSNNKSTVLSCLSSSKRELSC---LSSKVDIAQTATTSVN 79
Query: 1197 SYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALV 1018
SYP Y RL+PCPS GPPRVEHLV+SEGGPVLE+I ++L+LPP FVADLIHFGAV+YALV
Sbjct: 80 SYPEYNRLVPCPSHNGPPRVEHLVISEGGPVLEYICRALDLPPSFVADLIHFGAVYYALV 139
Query: 1017 CPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRV 838
CP PP SATPEQI+ FK+ T+P +LR+R+SIKGKT+REAQKTFRIT D+FVE GTYLRV
Sbjct: 140 CPQPPPSATPEQIRIFKEVTEPSVLRKRASIKGKTVREAQKTFRITHADQFVEAGTYLRV 199
Query: 837 HVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQA 658
HVHPKRFPRCYEIDW+SRIIAVT+SYVVLDKPAGTSVGGTTDNIEESC TFATRALG
Sbjct: 200 HVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDNIEESCVTFATRALGFST 259
Query: 657 PLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRP 478
PL+TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE APV IG+ITHYMRP
Sbjct: 260 PLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALTAAPVPIGLITHYMRP 319
Query: 477 VNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINL 298
+NIAPRL+SEDFI GW LCQLEV+EC++VPWP+S ++E IED GWP+KD AYECKINL
Sbjct: 320 INIAPRLVSEDFIKGWYLCQLEVMECKEVPWPDSSIQENYCIEDSGWPSKDHAYECKINL 379
Query: 297 LTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEE 118
LTGRTHQ+R QLAACGAP+VGDS YMPAAIAE PGLNPFGK KK YT D+ K +AI E
Sbjct: 380 LTGRTHQVRAQLAACGAPIVGDSMYMPAAIAEVANPGLNPFGKCKK-YTSDNDKEMAITE 438
Query: 117 WIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
WIA +GKEPSVAIGLQAC ISWDDGEH YEA SPWWR
Sbjct: 439 WIAQYGKEPSVAIGLQACQISWDDGEHFYEARSPWWR 475
>gb|OMO76757.1| Pseudouridine synthase, RsuA/RluB/C/D/E/F [Corchorus capsularis]
Length = 475
Score = 657 bits (1694), Expect = 0.0
Identities = 323/461 (70%), Positives = 367/461 (79%), Gaps = 7/461 (1%)
Frame = -3
Query: 1368 RNFFIPINLARTLASTH-SPFKHIHKHH------VVNAVGRNLSCEXXXXXXXXXXXXXX 1210
R+ P++L RTLAS++ S + K++ +++ R LSC
Sbjct: 16 RSLSAPVSLLRTLASSNASSLYKLRKNNSKTVLSCLSSSKRGLSC--LSSKVDVAQTAST 73
Query: 1209 XXXXSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVF 1030
YP Y RLLPCPS+ GPPRVEHLVVSEGGPVLE+I K+L+LPPLFVADLIHFGAV+
Sbjct: 74 STVNGYPEYHRLLPCPSENGPPRVEHLVVSEGGPVLEYICKALDLPPLFVADLIHFGAVY 133
Query: 1029 YALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGT 850
YALVCP PP SATPEQ+K FK+ T P +L +R+SIKGKT+REAQKTFRIT D+FVE GT
Sbjct: 134 YALVCPQPPPSATPEQVKIFKEVTAPSVLSKRASIKGKTVREAQKTFRITHVDQFVEAGT 193
Query: 849 YLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRAL 670
YLRVHVHPKRFPRCY IDW+SRIIAVT+SYVVLDKPAGTSVGGTTDNIEESCATFATRAL
Sbjct: 194 YLRVHVHPKRFPRCYAIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDNIEESCATFATRAL 253
Query: 669 GLQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITH 490
G PL+TTHQIDNCTEGCVV ARTKEYCSVFHGKIRE APV G+ITH
Sbjct: 254 GFSIPLKTTHQIDNCTEGCVVFARTKEYCSVFHGKIREKKVKKLYLALAAAPVPTGIITH 313
Query: 489 YMRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYEC 310
YMRP+N+APRL+SEDFI GW LCQLEVLEC++VPWP+S+++E IED GWP+KD+AYEC
Sbjct: 314 YMRPINMAPRLVSEDFIKGWYLCQLEVLECKEVPWPDSVVQENYCIEDSGWPSKDYAYEC 373
Query: 309 KINLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKAL 130
KINLLTGRTHQIR QLAACGAP+VGDS YMPA IAE PGLNPFGK KK YT +D K +
Sbjct: 374 KINLLTGRTHQIRAQLAACGAPIVGDSMYMPATIAEMANPGLNPFGKYKK-YTTEDDKEI 432
Query: 129 AIEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
AI+EWIA +GKEPSVAIGLQAC ISWD+GEH YEA SPWWR
Sbjct: 433 AIKEWIAQYGKEPSVAIGLQACQISWDEGEHCYEARSPWWR 473
>ref|XP_010267715.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Nelumbo
nucifera]
Length = 484
Score = 655 bits (1689), Expect = 0.0
Identities = 306/396 (77%), Positives = 342/396 (86%)
Frame = -3
Query: 1194 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 1015
YP Y RLLPCP Q GPPR+EHLVVSEGGPVLE+ISK+L+LPPLFVADLIHFGAV+YALVC
Sbjct: 89 YPEYTRLLPCPLQNGPPRIEHLVVSEGGPVLEYISKALDLPPLFVADLIHFGAVYYALVC 148
Query: 1014 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 835
P+PP +A PEQI+ +K+ T P +L+ R SIKGKTIREAQKTFRIT +EFVE GTYLRVH
Sbjct: 149 PEPPPNAMPEQIRVYKEVTAPSVLKNRLSIKGKTIREAQKTFRITHINEFVEAGTYLRVH 208
Query: 834 VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAP 655
VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGT+DNIEESC TFATRALGL P
Sbjct: 209 VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTSDNIEESCVTFATRALGLTIP 268
Query: 654 LRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPV 475
L+TTHQIDNCTEGCVVLARTKEYCS+FHGKIRE APV +G ITH+MRP+
Sbjct: 269 LKTTHQIDNCTEGCVVLARTKEYCSIFHGKIREKKVKKLYLALAAAPVPVGTITHHMRPI 328
Query: 474 NIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLL 295
NIAPRLIS+DFI GW LC+LEVLEC++VPWPNS +E++ I+DCGWP KD AYECKINLL
Sbjct: 329 NIAPRLISKDFIKGWHLCKLEVLECKEVPWPNSNIEKEYCIDDCGWPQKDVAYECKINLL 388
Query: 294 TGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEW 115
TGRTHQ+R QLAACGAP+VGDS YMPAA+AE PGLNPFG+ +YT+DD + AIEEW
Sbjct: 389 TGRTHQVRAQLAACGAPIVGDSMYMPAALAEMTNPGLNPFGEYGMKYTNDDNRTKAIEEW 448
Query: 114 IAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
I HHGKEP +AIGLQAC ISWD+GEH YEAGSPWWR
Sbjct: 449 IVHHGKEPRIAIGLQACQISWDEGEHFYEAGSPWWR 484
>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
Length = 470
Score = 654 bits (1687), Expect = 0.0
Identities = 315/456 (69%), Positives = 365/456 (80%), Gaps = 2/456 (0%)
Frame = -3
Query: 1368 RNFFIPINLARTLASTHSPFKHIHKHHVV--NAVGRNLSCEXXXXXXXXXXXXXXXXXXS 1195
R+F P+ L RTLA T + ++K +V + R LSCE
Sbjct: 15 RSFSAPVTLLRTLAFTRA--YSLNKKALVWCSLSKRKLSCESLKQDIACTTATSSVNG-- 70
Query: 1194 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 1015
YP Y RLLPCPS PPR+EHLVVSE GPVL++I K+L+LPPLFVADLIHFGAV YALVC
Sbjct: 71 YPEYTRLLPCPSHNSPPRIEHLVVSEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVC 130
Query: 1014 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 835
P PPR+ATPEQI+ F++ T P +L++R+SIKGKT+REAQKTFRIT D+F+E G YLRVH
Sbjct: 131 PQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFRITHVDQFLEAGMYLRVH 190
Query: 834 VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAP 655
VHPKRFPRCY+IDW+SRII VTES+VVLDKPAGTSVGGTTDNIEESCATFATRALGL AP
Sbjct: 191 VHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNIEESCATFATRALGLTAP 250
Query: 654 LRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPV 475
LRTTHQIDNCTEGCVVLART+E CSVFHGKIRE +PV IGV+ HYMRP+
Sbjct: 251 LRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKTVKKLYIALAASPVPIGVVNHYMRPI 310
Query: 474 NIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLL 295
N+APRL+SE+FI GW LCQLEV+EC++VPWP+++MEEK ++DCGWP+KD AYECKINLL
Sbjct: 311 NMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVMEEKYCVQDCGWPSKDHAYECKINLL 370
Query: 294 TGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEW 115
TGRTHQIR QLAA GAPLVGDS YMPAA+AE PG NPFGK KK+YT +D KA+A+EEW
Sbjct: 371 TGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSPGCNPFGKYKKQYTSEDDKAIAVEEW 430
Query: 114 IAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
+ HGKEP+VAIGLQAC ISWDDG+H Y AGSPWWR
Sbjct: 431 VLCHGKEPNVAIGLQACQISWDDGKHIYNAGSPWWR 466
>ref|XP_021597321.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Manihot
esculenta]
gb|OAY25963.1| hypothetical protein MANES_16G010400 [Manihot esculenta]
Length = 475
Score = 654 bits (1686), Expect = 0.0
Identities = 317/460 (68%), Positives = 361/460 (78%), Gaps = 6/460 (1%)
Frame = -3
Query: 1368 RNFFIPINLARTLASTHSPFKHIHKHHVVNAVG------RNLSCEXXXXXXXXXXXXXXX 1207
R+F P+ RTLASTH+ +KH N++ R +
Sbjct: 15 RSFGAPVTALRTLASTHTYL--FNKHQNNNSLAWFSLSSRKGTFSYASSGAEVTCTTTSS 72
Query: 1206 XXXSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFY 1027
Y Y RLLPCPS PPRVEHLVV E GPVL++I K+LNLP LFVADLIHFGAV Y
Sbjct: 73 SANGYLDYDRLLPCPSHNRPPRVEHLVVLEEGPVLDYICKALNLPHLFVADLIHFGAVHY 132
Query: 1026 ALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTY 847
ALVCP PP +ATPEQ+ FKK+T P +L++R+SIKGKT+REAQKTFRIT D+F+E G+Y
Sbjct: 133 ALVCPQPPPTATPEQVSLFKKFTAPSVLKKRASIKGKTVREAQKTFRITHVDQFLEAGSY 192
Query: 846 LRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALG 667
LRVHVHPKRFPRCYEIDW+SRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALG
Sbjct: 193 LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALG 252
Query: 666 LQAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHY 487
L PL+TTHQIDNCTEGCVVLARTKEYCSVFHGKIRE +PV +GVITHY
Sbjct: 253 LPTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAASPVPVGVITHY 312
Query: 486 MRPVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECK 307
MRPVNIAPR++SE+FI GW LCQLEVLEC+KVPWP++I EE ++EDCGWP+KD+AYECK
Sbjct: 313 MRPVNIAPRIVSEEFIKGWNLCQLEVLECKKVPWPDAITEETYSVEDCGWPSKDYAYECK 372
Query: 306 INLLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALA 127
INLLTGRTHQIR QLAACGAPLVGDS YMPAAIAE PG+NPFGK +K+ T ++ ++LA
Sbjct: 373 INLLTGRTHQIRAQLAACGAPLVGDSMYMPAAIAEIASPGVNPFGKFQKQCTSEEDQSLA 432
Query: 126 IEEWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
EW+ HGKEPSVAIGLQAC ISWDDG+H Y AGSPWWR
Sbjct: 433 TAEWVLQHGKEPSVAIGLQACQISWDDGKHIYNAGSPWWR 472
>gb|PNT39135.1| hypothetical protein POPTR_004G019100v3 [Populus trichocarpa]
gb|PNT39136.1| hypothetical protein POPTR_004G019100v3 [Populus trichocarpa]
gb|PNT39137.1| hypothetical protein POPTR_004G019100v3 [Populus trichocarpa]
gb|PNT39138.1| hypothetical protein POPTR_004G019100v3 [Populus trichocarpa]
Length = 470
Score = 653 bits (1684), Expect = 0.0
Identities = 314/456 (68%), Positives = 365/456 (80%), Gaps = 2/456 (0%)
Frame = -3
Query: 1368 RNFFIPINLARTLASTHSPFKHIHKHHVV--NAVGRNLSCEXXXXXXXXXXXXXXXXXXS 1195
R+F P+ L RTLA T + ++K +V + + LSCE
Sbjct: 15 RSFSAPVTLLRTLAFTRA--YSLNKKALVWCSLSKKKLSCESLKQDIACTTATSSVNG-- 70
Query: 1194 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 1015
YP Y RLLPCPS PPR+EHLVVSE GPVL++I K+L+LPPLFVADLIHFGAV YALVC
Sbjct: 71 YPEYTRLLPCPSHNSPPRIEHLVVSEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVC 130
Query: 1014 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 835
P PPR+ATPEQI+ F++ T P +L++R+SIKGKT+REAQKTFRIT D+F+E G YLRVH
Sbjct: 131 PQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFRITHVDQFLEAGMYLRVH 190
Query: 834 VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQAP 655
VHPKRFPRCY+IDW+SRII VTES+VVLDKPAGTSVGGTTDNIEESCATFATRALGL AP
Sbjct: 191 VHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNIEESCATFATRALGLTAP 250
Query: 654 LRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMRPV 475
LRTTHQIDNCTEGCVVLART+E CSVFHGKIRE +PV IGV+ HYMRP+
Sbjct: 251 LRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKTVKKLYIALAASPVPIGVVNHYMRPI 310
Query: 474 NIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKINLL 295
N+APRL+SE+FI GW LCQLEV+EC++VPWP+++MEEK ++DCGWP+KD AYECKINLL
Sbjct: 311 NMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVMEEKYCVQDCGWPSKDHAYECKINLL 370
Query: 294 TGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIEEW 115
TGRTHQIR QLAA GAPLVGDS YMPAA+AE PG NPFGK KK+YT +D KA+A+EEW
Sbjct: 371 TGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSPGCNPFGKYKKQYTSEDDKAIAVEEW 430
Query: 114 IAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
+ HGKEP+VAIGLQAC ISWDDG+H Y AGSPWWR
Sbjct: 431 VLCHGKEPNVAIGLQACQISWDDGKHIYNAGSPWWR 466
>ref|XP_019223734.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Nicotiana attenuata]
gb|OIT05735.1| rna uridine synthase 6, chloroplastic [Nicotiana attenuata]
Length = 483
Score = 652 bits (1682), Expect = 0.0
Identities = 315/458 (68%), Positives = 360/458 (78%), Gaps = 3/458 (0%)
Frame = -3
Query: 1371 RRNFFIPINLARTLASTHSPFKHIHKHH---VVNAVGRNLSCEXXXXXXXXXXXXXXXXX 1201
R F P+ L TLAS+ S H+ V ++ R C+
Sbjct: 27 RNGFVSPVTLLHTLASSRSRLLKNKNHYQDLVFSSCSRGFRCQSTALSDVNSTSHTVSSN 86
Query: 1200 XSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYAL 1021
+ YGRLLPCP Q PPRVEHLVV++ GPVL++ISK+L+LPPL+V DLI FGAV+YAL
Sbjct: 87 G-HLMYGRLLPCPLQNSPPRVEHLVVTKEGPVLDYISKALDLPPLYVEDLIQFGAVYYAL 145
Query: 1020 VCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLR 841
VCP PP +AT EQIK +++ TDP +LR+R+SIKGKT+REAQKTFRIT DE VETGTYLR
Sbjct: 146 VCPKPPPTATAEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRADEIVETGTYLR 205
Query: 840 VHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLQ 661
VHVHPKRFPRCYEIDW+SRIIAVT+ YV+LDKPAGTSVGGTTDNIEESCATFATRALG
Sbjct: 206 VHVHPKRFPRCYEIDWKSRIIAVTDDYVILDKPAGTSVGGTTDNIEESCATFATRALGFS 265
Query: 660 APLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREXXXXXXXXXXXXAPVSIGVITHYMR 481
APL+TTHQIDNCTEGCVVLAR+KEYCSVFHGKIRE APV IG++THYMR
Sbjct: 266 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAAPVPIGILTHYMR 325
Query: 480 PVNIAPRLISEDFISGWRLCQLEVLECRKVPWPNSIMEEKNNIEDCGWPTKDFAYECKIN 301
P+N+APRL+SEDF+ GW LCQLEVLEC+KV WP S +E NIEDCGWP KDFAYEC+IN
Sbjct: 326 PINMAPRLVSEDFVKGWYLCQLEVLECKKVAWPRSEIESTYNIEDCGWPLKDFAYECQIN 385
Query: 300 LLTGRTHQIRTQLAACGAPLVGDSAYMPAAIAEANCPGLNPFGKNKKEYTDDDAKALAIE 121
LLTGRTHQIR QLAAC AP+VGD+ YMPAAIAE PG NP GKNKK+YT+++ K+LAI+
Sbjct: 386 LLTGRTHQIRAQLAACSAPVVGDAMYMPAAIAEMVSPGSNPLGKNKKKYTNENDKSLAID 445
Query: 120 EWIAHHGKEPSVAIGLQACHISWDDGEHSYEAGSPWWR 7
EWIA HGKEPSVAIGLQAC ISWDDGEH YEA SPWWR
Sbjct: 446 EWIAQHGKEPSVAIGLQACQISWDDGEHCYEARSPWWR 483