BLASTX nr result

ID: Rehmannia29_contig00009213 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00009213
         (545 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV39912.1| replication protein A 70 kDa DNA-binding subunit ...    53   4e-06

>gb|KZV39912.1| replication protein A 70 kDa DNA-binding subunit C-like [Dorcoceras
           hygrometricum]
          Length = 89

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 28/68 (41%), Positives = 40/68 (58%)
 Frame = +1

Query: 91  NNFSAKQHLEI*HLQYKKMAPIMSLIKDINMSKSQWPMKLRLVRFYEKPMYNDNSQIQSM 270
           N  + ++ +E+ H  Y      ++LIK++N SK QW +KLRLVR YE   Y       ++
Sbjct: 4   NTTTLREKIELMHKTYGSS---INLIKEVNPSKMQWALKLRLVRCYELLAYGKGGDF-TL 59

Query: 271 ECVFHDAE 294
           ECVFHD E
Sbjct: 60  ECVFHDKE 67


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