BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00008800
         (764 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP44486.1| Retrovirus-related Pol polyprotein from transposo...   263   6e-82
gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposo...   263   1e-81
gb|KYP64927.1| Retrovirus-related Pol polyprotein from transposo...   261   2e-81
gb|KYP44480.1| Retrovirus-related Pol polyprotein from transposo...   263   2e-81
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo...   275   5e-81
ref|XP_020233470.1| uncharacterized protein LOC109813654 [Cajanu...   272   2e-80
gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo...   258   2e-79
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   269   3e-79
gb|PNX78102.1| retrovirus-related Pol polyprotein from transposo...   257   3e-79
gb|KYP70746.1| Retrovirus-related Pol polyprotein from transposo...   251   3e-79
gb|KYP42777.1| Retrovirus-related Pol polyprotein from transposo...   255   3e-79
gb|PNX75166.1| retrovirus-related Pol polyprotein from transposo...   256   3e-79
gb|PKI44367.1| hypothetical protein CRG98_035241, partial [Punic...   257   9e-79
gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposo...   256   1e-78
ref|XP_019080407.1| PREDICTED: uncharacterized protein LOC109123...   263   1e-77
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   260   1e-77
gb|PNY12955.1| retrovirus-related Pol polyprotein from transposo...   253   2e-77
gb|KYP62066.1| Retrovirus-related Pol polyprotein from transposo...   248   2e-77
gb|PNX90082.1| retrovirus-related Pol polyprotein from transposo...   249   3e-77
gb|PNX99662.1| retrovirus-related Pol polyprotein from transposo...   262   3e-77

>gb|KYP44486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 513

 Score =  263 bits (673), Expect = 6e-82
 Identities = 133/251 (52%), Positives = 177/251 (70%), Gaps = 1/251 (0%)
 Frame = +1

Query: 7   LSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTI 186
           L+TLPA + +IGC+WVFK KTN+DGS++++KARLVAKG+ Q  GFDF+ETFS VVKP+TI
Sbjct: 63  LTTLPAGRNLIGCRWVFKVKTNSDGSINRHKARLVAKGFHQRDGFDFSETFSPVVKPATI 122

Query: 187 RVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGLK 366
           R++LS+ +S+SW MRQ+D+ NAFLNG+L+ DIYM+QPPGF Q  +K LVCKL KSLYGLK
Sbjct: 123 RIILSIVVSRSWDMRQIDIANAFLNGDLQEDIYMAQPPGFIQ-TDKSLVCKLQKSLYGLK 181

Query: 367 QASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXXX 546
           QA RAW  +L+  L+ IGF+ +K D+ LF R  K+    I+ YVDDIII GS+       
Sbjct: 182 QAPRAWFERLHLSLSRIGFYYAKMDSSLFIRFHKDHITFILVYVDDIIICGSSTSAISSV 241

Query: 547 XXXXXXFFSLKDLGFLHYFLGIEF-KFDKNGAVLTQHKYIEKLLDKAGMKGCRGVATPMV 723
                  F ++DLGF +YFLGI+  +      +LTQ KYI  LL++  M   + + TPMV
Sbjct: 242 VEQLQSEFPVRDLGFPNYFLGIQVDQLPNRTLMLTQTKYINDLLNRTNMHMAKPIKTPMV 301

Query: 724 SSPPLSKFDGT 756
           +   L   +GT
Sbjct: 302 AGLKLQPLEGT 312


>gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 539

 Score =  263 bits (673), Expect = 1e-81
 Identities = 134/248 (54%), Positives = 168/248 (67%), Gaps = 1/248 (0%)
 Frame = +1

Query: 4   TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 183
           TL  LP D+  IGCKWVF+ K N+DGS+++YKARLVAKG+ Q PGFDF ETFS ++KP T
Sbjct: 54  TLVQLPPDRNAIGCKWVFRIKENSDGSVNRYKARLVAKGFLQQPGFDFNETFSPIIKPVT 113

Query: 184 IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGL 363
           IR++L++A+S  W + QLDV+NAFLNG L   +YM QPPGFE  P+  LVCKLNK+LYGL
Sbjct: 114 IRLILTLAISNHWDIHQLDVNNAFLNGSLNETVYMQQPPGFE-VPDSTLVCKLNKALYGL 172

Query: 364 KQASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXX 543
           KQA R W  +L   L   GF  SK D  LF  H +++ V ++ YVDDIIITG++      
Sbjct: 173 KQAPRQWFERLQYTLLQFGFKASKCDPSLFTYHMQSNIVYLLVYVDDIIITGNSFQFTQQ 232

Query: 544 XXXXXXXFFSLKDLGFLHYFLGIEFKFDKNGAV-LTQHKYIEKLLDKAGMKGCRGVATPM 720
                   FSLK LG L YFLGIE +  +NG+V LTQ KYI  LL +  M     +++PM
Sbjct: 233 LIDQLNSIFSLKQLGKLDYFLGIEVRHLQNGSVLLTQSKYIRDLLQRTNMLEANAISSPM 292

Query: 721 VSSPPLSK 744
           VSS  LSK
Sbjct: 293 VSSCKLSK 300


>gb|KYP64927.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 470

 Score =  261 bits (667), Expect = 2e-81
 Identities = 133/248 (53%), Positives = 167/248 (67%), Gaps = 1/248 (0%)
 Frame = +1

Query: 4   TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 183
           TL  LP D+  IGCKWVF+ K N+DGS+++YKARLVAKG+ Q PGFDF ETFS V+KP T
Sbjct: 54  TLVQLPPDRNAIGCKWVFRIKENSDGSVNRYKARLVAKGFLQQPGFDFNETFSPVIKPVT 113

Query: 184 IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGL 363
           IR++L++A+S  W + QLDV+NAFLNG L   +YM QPPGFE  P+  LVCK NK+LYGL
Sbjct: 114 IRLILTLAISNHWDIHQLDVNNAFLNGSLNETVYMQQPPGFE-VPDSTLVCKSNKALYGL 172

Query: 364 KQASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXX 543
           KQA R W  +L   L   GF  +K D  LF  H +++ V ++ YVDDIIITG++      
Sbjct: 173 KQAPRQWFERLQYTLLQFGFKANKCDPSLFTYHVQSNIVYLLVYVDDIIITGNSSQFTQQ 232

Query: 544 XXXXXXXFFSLKDLGFLHYFLGIEFKFDKNGAV-LTQHKYIEKLLDKAGMKGCRGVATPM 720
                   FSLK LG L YFLGIE +  +NG+V LTQ KYI  LL +  M     +++PM
Sbjct: 233 LIDQLNSIFSLKQLGKLDYFLGIEVRHLQNGSVLLTQSKYIRDLLQRTNMLEANAISSPM 292

Query: 721 VSSPPLSK 744
           VSS  LSK
Sbjct: 293 VSSCKLSK 300


>gb|KYP44480.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 552

 Score =  263 bits (673), Expect = 2e-81
 Identities = 133/251 (52%), Positives = 177/251 (70%), Gaps = 1/251 (0%)
 Frame = +1

Query: 7   LSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTI 186
           L+TLPA + +IGC+WVFK KTN+DGS++++KARLVAKG+ Q  GFDF+ETFS VVKP+TI
Sbjct: 63  LTTLPAGRNLIGCRWVFKVKTNSDGSINRHKARLVAKGFHQRDGFDFSETFSPVVKPATI 122

Query: 187 RVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGLK 366
           R++LS+ +S+SW MRQ+D+ NAFLNG+L+ DIYM+QPPGF Q  +K LVCKL KSLYGLK
Sbjct: 123 RIILSIVVSRSWDMRQIDIANAFLNGDLQEDIYMAQPPGFIQ-TDKSLVCKLQKSLYGLK 181

Query: 367 QASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXXX 546
           QA RAW  +L+  L+ IGF+ +K D+ LF R  K+    I+ YVDDIII GS+       
Sbjct: 182 QAPRAWFERLHLSLSRIGFYYAKMDSSLFIRFHKDHITFILVYVDDIIICGSSTSAISSV 241

Query: 547 XXXXXXFFSLKDLGFLHYFLGIEF-KFDKNGAVLTQHKYIEKLLDKAGMKGCRGVATPMV 723
                  F ++DLGF +YFLGI+  +      +LTQ KYI  LL++  M   + + TPMV
Sbjct: 242 VEQLQSEFPVRDLGFPNYFLGIQVDQLPNRTLMLTQTKYINDLLNRTNMHMAKPIKTPMV 301

Query: 724 SSPPLSKFDGT 756
           +   L   +GT
Sbjct: 302 AGLKLQPLEGT 312


>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  275 bits (702), Expect = 5e-81
 Identities = 143/254 (56%), Positives = 177/254 (69%), Gaps = 1/254 (0%)
 Frame = +1

Query: 4    TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 183
            TL  LP  ++ IGCKWVF+ K N DGS++KYKARLVAKG+ Q PG DF+ETFS VVKP T
Sbjct: 923  TLVDLPPGRKSIGCKWVFRLKENPDGSINKYKARLVAKGFHQQPGVDFSETFSPVVKPVT 982

Query: 184  IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGL 363
            IR+VLS+A++  W +RQLD++NAFLNG LE DIYMSQPPGF +   K LVCKL+KSLYGL
Sbjct: 983  IRIVLSLAVTFQWPLRQLDINNAFLNGMLEEDIYMSQPPGFIEPNSKHLVCKLHKSLYGL 1042

Query: 364  KQASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXX 543
            KQA RAW  +L  VL  +GFH SK D  LF   + ++ V ++ YVDDII+TG++      
Sbjct: 1043 KQAPRAWFDRLTSVLLKLGFHKSKCDPSLFIFSTPSAIVYMLIYVDDIILTGNSSSLMQQ 1102

Query: 544  XXXXXXXFFSLKDLGFLHYFLGIEFKFDKNG-AVLTQHKYIEKLLDKAGMKGCRGVATPM 720
                    FSLKDLG L YFLGIE K   NG  +L+QHKYI  LL K  M+  +G++TPM
Sbjct: 1103 FINHLHATFSLKDLGTLDYFLGIEVKSLSNGRLLLSQHKYISDLLTKVKMEDSKGISTPM 1162

Query: 721  VSSPPLSKFDGTRF 762
            +    L+K  GT F
Sbjct: 1163 IGGQQLAK-TGTLF 1175


>ref|XP_020233470.1| uncharacterized protein LOC109813654 [Cajanus cajan]
          Length = 1229

 Score =  272 bits (696), Expect = 2e-80
 Identities = 141/254 (55%), Positives = 176/254 (69%), Gaps = 1/254 (0%)
 Frame = +1

Query: 4    TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 183
            TL  LP  ++ IGCKWVF+ K N DGS++KYKARLV KG+ Q PG DF+ETFS VVKP T
Sbjct: 895  TLVELPPGRKPIGCKWVFRLKENPDGSINKYKARLVVKGFHQQPGVDFSETFSPVVKPVT 954

Query: 184  IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGL 363
            I++VLS+A++  W +RQLD+ NAFLNG LE DIYMSQPPGF +   K LVCKL+KSLYGL
Sbjct: 955  IQIVLSLAVTFQWPLRQLDISNAFLNGMLEEDIYMSQPPGFIEPNSKHLVCKLHKSLYGL 1014

Query: 364  KQASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXX 543
            KQA RAW  +L  VL  +GFH SK D  LF   + ++TV ++ YVDDII+TG++      
Sbjct: 1015 KQAPRAWFDRLTSVLLKLGFHKSKCDPSLFIFSTPSATVYMLIYVDDIILTGNSSSLLQK 1074

Query: 544  XXXXXXXFFSLKDLGFLHYFLGIEFKFDKNG-AVLTQHKYIEKLLDKAGMKGCRGVATPM 720
                    FSLKDLG L YFLGIE K   +G  +L+QHKYI  LL K  M+  +G++TPM
Sbjct: 1075 FIDHLNAIFSLKDLGTLDYFLGIEVKSLSDGRLLLSQHKYISDLLTKVKMEDSKGISTPM 1134

Query: 721  VSSPPLSKFDGTRF 762
            +    L+K  GT F
Sbjct: 1135 IGGQQLAK-TGTLF 1147


>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 538

 Score =  258 bits (658), Expect = 2e-79
 Identities = 132/254 (51%), Positives = 175/254 (68%), Gaps = 1/254 (0%)
 Frame = +1

Query: 4   TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 183
           TL +LP +K  IGCKWVF+ K N+DG+++KYKARLVAKG+ Q  G D+ ETFS VVKP T
Sbjct: 55  TLVSLPPNKTAIGCKWVFRIKENSDGTVNKYKARLVAKGFHQQFGSDYNETFSPVVKPVT 114

Query: 184 IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGL 363
           IR++L++AL+  W+++QLDV+NAFLNG L+ ++YMSQPPGFE   +K LVCKL+K++YGL
Sbjct: 115 IRLILTLALTHHWSIQQLDVNNAFLNGNLQEEVYMSQPPGFES-SDKTLVCKLHKAIYGL 173

Query: 364 KQASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXX 543
           KQA RAW  KL   L  + F  SK D  LF     N+ + I+ YVDDIIITG+N      
Sbjct: 174 KQAPRAWFDKLKTTLFQLNFQISKCDPSLFVYSHDNNVIYILVYVDDIIITGNNSSTLQN 233

Query: 544 XXXXXXXFFSLKDLGFLHYFLGIEFKFDKNGAV-LTQHKYIEKLLDKAGMKGCRGVATPM 720
                   FSLKDLG L +FLGIE K + +G++ LTQ KYI  LL++  M+    +++PM
Sbjct: 234 IIAQLNSAFSLKDLGRLDFFLGIEVKSNTDGSLTLTQSKYIRDLLNRTNMENSNPISSPM 293

Query: 721 VSSPPLSKFDGTRF 762
           VS   LS+    +F
Sbjct: 294 VSGCKLSRTGSEKF 307


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  269 bits (688), Expect = 3e-79
 Identities = 137/249 (55%), Positives = 179/249 (71%), Gaps = 3/249 (1%)
 Frame = +1

Query: 4    TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 183
            +L +LP ++  +GC+WVFK K N DGS+S+YKARLVAKGY+Q PGFDF ETFS VVKP+T
Sbjct: 777  SLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTT 836

Query: 184  IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFE--QFPEKRLVCKLNKSLY 357
            IRVVL++A+S+SW +RQLDV+NAFLNGEL+ ++YM QPPGF+     E++LVCKL+K+LY
Sbjct: 837  IRVVLAIAVSQSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALY 896

Query: 358  GLKQASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXX 537
            GLKQA RAW  KL   L   GF ++K+D  LF R +  S++ ++ YVDDI++TGS+    
Sbjct: 897  GLKQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEI 956

Query: 538  XXXXXXXXXFFSLKDLGFLHYFLGIEFKFDKNGAV-LTQHKYIEKLLDKAGMKGCRGVAT 714
                      FSLKDLG L YFLGIE K   +G + L+Q KYI+ LL K  M G + + T
Sbjct: 957  HELISRLRGLFSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPT 1016

Query: 715  PMVSSPPLS 741
            PM+S   LS
Sbjct: 1017 PMLSGLKLS 1025


>gb|PNX78102.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 535

 Score =  257 bits (657), Expect = 3e-79
 Identities = 125/249 (50%), Positives = 173/249 (69%), Gaps = 1/249 (0%)
 Frame = +1

Query: 4   TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 183
           +L  LP  ++ IGCKW+F+ K N DGS++KYKARLVAKG+ Q+PGFDFTETFS V+KP T
Sbjct: 51  SLVPLPPHRKAIGCKWIFRVKENPDGSINKYKARLVAKGFLQTPGFDFTETFSPVIKPVT 110

Query: 184 IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGL 363
           IR++L++A++  W+++Q+D++NAFLNG L+ ++YM+QPPGFE   +K LVCKL+K+LYGL
Sbjct: 111 IRIILTLAVTYKWSVQQIDINNAFLNGILQEEVYMTQPPGFES-SDKNLVCKLHKALYGL 169

Query: 364 KQASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXX 543
           KQA RAW  +L + L  +GF  S+ D  L   H   +   ++ YVDDI+ITGS       
Sbjct: 170 KQAPRAWYDRLTQTLLQMGFTKSRCDPSLLVHHQNGACTYVLVYVDDILITGSAPHLIKD 229

Query: 544 XXXXXXXFFSLKDLGFLHYFLGIEFKFDKNGAVLT-QHKYIEKLLDKAGMKGCRGVATPM 720
                   F+LK LG + YFLG+E     +G++L  Q KYI+ LL K  M+ C+ + +PM
Sbjct: 230 LIHKLNIKFALKQLGEVDYFLGLEVHHSTSGSILLHQSKYIKDLLCKTKMENCKPIGSPM 289

Query: 721 VSSPPLSKF 747
           VSS  LSKF
Sbjct: 290 VSSCKLSKF 298


>gb|KYP70746.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 324

 Score =  251 bits (640), Expect = 3e-79
 Identities = 135/249 (54%), Positives = 163/249 (65%), Gaps = 3/249 (1%)
 Frame = +1

Query: 7   LSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTI 186
           L +LP+D++ +GCKWVF+ K NADGS+ K KARLVAKG+ Q  GFDF ETFS V+KP TI
Sbjct: 56  LVSLPSDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITI 115

Query: 187 RVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGLK 366
           R++L++AL+ +W + QLDV+NAFLNG LE  IYM QPPGFE   +K LVCKLNK+LYGLK
Sbjct: 116 RIILTLALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFEA-GDKSLVCKLNKALYGLK 174

Query: 367 QA--SRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXX 540
           QA   R W +KL   LT  GF  SK D  LF    +  T+ I+ YVDDIIITGS+     
Sbjct: 175 QAPPPRQWFNKLKLTLTRFGFQASKCDPSLFQYQHQTHTIFILVYVDDIIITGSSSLLIQ 234

Query: 541 XXXXXXXXFFSLKDLGFLHYFLGIEFK-FDKNGAVLTQHKYIEKLLDKAGMKGCRGVATP 717
                    FSLK LG L YFLGIE K       VLTQ KYI  LL K  +    G  +P
Sbjct: 235 QITNQLDSIFSLKQLGSLDYFLGIEVKHLPDKSLVLTQSKYIRDLLFKTNLAEAHGAPSP 294

Query: 718 MVSSPPLSK 744
           M S+  LS+
Sbjct: 295 MFSNCKLSR 303


>gb|KYP42777.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 459

 Score =  255 bits (651), Expect = 3e-79
 Identities = 131/247 (53%), Positives = 167/247 (67%), Gaps = 1/247 (0%)
 Frame = +1

Query: 7   LSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTI 186
           L TLP ++QV+GCKWVF+ K NADGS++KYKARLVAKG+ Q PGFDF ETFS V+KP+T+
Sbjct: 56  LVTLPPNRQVVGCKWVFRIKENADGSINKYKARLVAKGFHQVPGFDFHETFSPVIKPTTL 115

Query: 187 RVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGLK 366
           R++L++AL+  W +  LDV+NAFLNG LE  ++M QPPGFE   +K LVC+LNK+LYGLK
Sbjct: 116 RIILTLALTNGWDLLHLDVNNAFLNGLLEETVFMVQPPGFES-ADKSLVCRLNKALYGLK 174

Query: 367 QASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXXX 546
           QA R W  +L   L   GF   K+D  LF    +  TV ++ YVDDII+TGS+       
Sbjct: 175 QAPRQWFDRLKTTLLQFGFSACKSDPSLFTYTLQQQTVYLLVYVDDIILTGSSQSLIQQL 234

Query: 547 XXXXXXFFSLKDLGFLHYFLGIEFK-FDKNGAVLTQHKYIEKLLDKAGMKGCRGVATPMV 723
                  F+LK LG L YFLGIE K F     ++TQ KYI  LL K  M   + +++PMV
Sbjct: 235 TTQLNARFALKQLGLLDYFLGIEVKYFTDKSILMTQSKYIRDLLHKTKMAEAQPISSPMV 294

Query: 724 SSPPLSK 744
           SS  LSK
Sbjct: 295 SSCKLSK 301


>gb|PNX75166.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 499

 Score =  256 bits (654), Expect = 3e-79
 Identities = 127/249 (51%), Positives = 170/249 (68%), Gaps = 1/249 (0%)
 Frame = +1

Query: 4   TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 183
           TL  LP  K+ IGCKW+F+ K N DGS++KYKARLVAKG+ Q+PGFDFTETFS V+KP T
Sbjct: 15  TLVPLPPHKKAIGCKWIFRVKENPDGSINKYKARLVAKGFLQTPGFDFTETFSPVIKPVT 74

Query: 184 IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGL 363
           +R++L++A++  W+++Q+D++NAFLNG L+ ++YMSQP GFE   +K LVCKL+KSLYGL
Sbjct: 75  VRLILTLAITYKWSVQQIDINNAFLNGLLQEEVYMSQPAGFEN-SDKTLVCKLHKSLYGL 133

Query: 364 KQASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXX 543
           KQA RAW  +L   L  +GF  S+ D  L   H   +   ++ YVDDI+ITGS+      
Sbjct: 134 KQAPRAWYERLTHTLLQMGFVKSRCDPSLLVHHKHGACTYVLVYVDDILITGSDSHLVKD 193

Query: 544 XXXXXXXFFSLKDLGFLHYFLGIEFKFDKNGAVLT-QHKYIEKLLDKAGMKGCRGVATPM 720
                   F+LK LG L YFLGIE     +G +L  Q KY++ LL K  M  C+ + +PM
Sbjct: 194 LIHKLNVKFALKQLGELDYFLGIEVHHKPSGGLLLHQTKYVKDLLIKTNMDNCKPIGSPM 253

Query: 721 VSSPPLSKF 747
           VSS  L+KF
Sbjct: 254 VSSCRLTKF 262


>gb|PKI44367.1| hypothetical protein CRG98_035241, partial [Punica granatum]
          Length = 584

 Score =  257 bits (657), Expect = 9e-79
 Identities = 129/253 (50%), Positives = 167/253 (66%), Gaps = 2/253 (0%)
 Frame = +1

Query: 4   TLSTLPADKQ--VIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKP 177
           T   +PA K+  +IGCKWVF+ K NADGS+++YKARLVAKG+ Q PG D+TETFS V+KP
Sbjct: 142 TWDLVPASKRQNIIGCKWVFRIKRNADGSINRYKARLVAKGFHQRPGLDYTETFSPVIKP 201

Query: 178 STIRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLY 357
           +TIRVVLS+A+S  W +RQLDV NAFL+G ++ ++YM QPPGF        VC+L K+LY
Sbjct: 202 TTIRVVLSLAVSSGWPIRQLDVSNAFLHGSIDEEVYMVQPPGFVDSNHPTHVCRLRKALY 261

Query: 358 GLKQASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXX 537
           GLKQA RAW   L   L   GF TSK+D  LF   S N+ +  + YVDD+++TG++    
Sbjct: 262 GLKQAPRAWYRALKNFLMDYGFMTSKSDASLFVFTSGNTWIYFLVYVDDLLVTGNDSTAV 321

Query: 538 XXXXXXXXXFFSLKDLGFLHYFLGIEFKFDKNGAVLTQHKYIEKLLDKAGMKGCRGVATP 717
                     FS+KDLG LHYFLG+E      G  L+QHKYI +LL++  M G + V TP
Sbjct: 322 QQLINALSSRFSIKDLGMLHYFLGVEAAPTSTGLFLSQHKYIRELLERTDMAGAKEVNTP 381

Query: 718 MVSSPPLSKFDGT 756
           M  S  L   DG+
Sbjct: 382 MSCSASLLLHDGS 394


>gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 539

 Score =  256 bits (653), Expect = 1e-78
 Identities = 135/247 (54%), Positives = 163/247 (65%), Gaps = 1/247 (0%)
 Frame = +1

Query: 7   LSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTI 186
           L +LP+D++ +GCKWVF+ K NADGS+ K KARLVAKG+ Q  GFDF ETFS V+KP TI
Sbjct: 56  LVSLPSDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITI 115

Query: 187 RVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGLK 366
           R++L++AL+ +W + QLDV+NAFLNG LE  IYM QPPGFE   +K LVCKLNK+LYGLK
Sbjct: 116 RIILTLALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFEA-GDKSLVCKLNKALYGLK 174

Query: 367 QASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXXX 546
           QA R W +KL   LT  GF  SK D  LF    +  T+ I+ YVDDIIITGS+       
Sbjct: 175 QAPRQWFNKLKLTLTRFGFQASKCDPSLFQYQHQTHTIFILVYVDDIIITGSSSLLIQQI 234

Query: 547 XXXXXXFFSLKDLGFLHYFLGIEFK-FDKNGAVLTQHKYIEKLLDKAGMKGCRGVATPMV 723
                  FSLK LG L YFLGIE K       VLTQ KYI  LL K  +    G  +PM 
Sbjct: 235 TNQLDSIFSLKQLGSLDYFLGIEVKHLPDKSLVLTQSKYIRDLLFKTNLAEAHGAPSPMF 294

Query: 724 SSPPLSK 744
           S+  LS+
Sbjct: 295 SNCKLSR 301


>ref|XP_019080407.1| PREDICTED: uncharacterized protein LOC109123862 [Vitis vinifera]
          Length = 1018

 Score =  263 bits (671), Expect = 1e-77
 Identities = 130/250 (52%), Positives = 169/250 (67%)
 Frame = +1

Query: 4    TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 183
            +L  LPA +Q IGCKWV+KTK N DG++ KYKARLVAKG+ Q  GFDFTETFS VVKPST
Sbjct: 530  SLVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFDFTETFSPVVKPST 589

Query: 184  IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGL 363
            +RVV ++ALS++W ++QLDV+NAFLNG+L+ +++M QP GF       LVC+L+K+LYGL
Sbjct: 590  VRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEQNPNLVCRLHKALYGL 649

Query: 364  KQASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXX 543
            KQA RAW  KL++ L S GF ++K+D  LF R + N    ++ YVDDI++ GS+      
Sbjct: 650  KQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDILVIGSDTAAITS 709

Query: 544  XXXXXXXFFSLKDLGFLHYFLGIEFKFDKNGAVLTQHKYIEKLLDKAGMKGCRGVATPMV 723
                    FSLKDLG +HYFLGI+     NG  L+Q KYI  LL K  M  C+   TP+ 
Sbjct: 710  LIAQLNSEFSLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLP 769

Query: 724  SSPPLSKFDG 753
            +   L   DG
Sbjct: 770  TGLKLRVGDG 779


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 839

 Score =  260 bits (664), Expect = 1e-77
 Identities = 134/254 (52%), Positives = 172/254 (67%), Gaps = 1/254 (0%)
 Frame = +1

Query: 4    TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 183
            TL  LP+ +  IGCKWVF+ K N DG++ K+KARLVAKG+ Q  GFD+TETFS VVKP T
Sbjct: 568  TLVPLPSHRTAIGCKWVFRIKENPDGTVHKHKARLVAKGFHQQFGFDYTETFSPVVKPVT 627

Query: 184  IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGL 363
            IR++L++AL+  W+++QLDV+NAFLNG LE ++YMSQPPGFE   +K LVCKL+K++YGL
Sbjct: 628  IRLILTLALTHHWSIQQLDVNNAFLNGNLEEEVYMSQPPGFES-SDKSLVCKLHKAIYGL 686

Query: 364  KQASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXX 543
            KQA RAW  KL   L  + F  SK D  LF     N+ + I+ YVDDIIITG+N      
Sbjct: 687  KQAPRAWFDKLKATLFHLNFQISKCDPSLFVYSHANNVIYILVYVDDIIITGNNTTFLRN 746

Query: 544  XXXXXXXFFSLKDLGFLHYFLGIEFKFDKNGA-VLTQHKYIEKLLDKAGMKGCRGVATPM 720
                    FSLKDLG L YFLGIE   + +G+ +LTQ KYI  LL++  M+    + +PM
Sbjct: 747  IVSQLNSAFSLKDLGKLDYFLGIEVNSNSDGSLILTQSKYIRDLLNRTNMENSNSITSPM 806

Query: 721  VSSPPLSKFDGTRF 762
            VS   LSK    +F
Sbjct: 807  VSGCKLSKSGSDKF 820


>gb|PNY12955.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 535

 Score =  253 bits (645), Expect = 2e-77
 Identities = 127/249 (51%), Positives = 170/249 (68%), Gaps = 1/249 (0%)
 Frame = +1

Query: 4   TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 183
           +L  LP  K+ IGCKW+F+ K N+DG+++K+KARLVAKG+ Q+PGFDFTETFS V+KP T
Sbjct: 51  SLVPLPPHKKAIGCKWIFRVKENSDGTVNKFKARLVAKGFLQTPGFDFTETFSPVIKPIT 110

Query: 184 IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGL 363
           IRV+L++A++  W ++Q+DV+NAFLNG L+ ++YM QP GFE   +K LVCKL+KSLYGL
Sbjct: 111 IRVILTLAVTYKWPVQQIDVNNAFLNGWLQEEVYMKQPAGFES-SDKSLVCKLHKSLYGL 169

Query: 364 KQASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXX 543
           KQA RAW  +L + L  +GF TSK D  L   + + +   ++ YVDDI+ITGS       
Sbjct: 170 KQAPRAWYERLTQALLQMGFVTSKCDPSLLIHYQQGACTYVLIYVDDILITGSAPHLIKD 229

Query: 544 XXXXXXXFFSLKDLGFLHYFLGIE-FKFDKNGAVLTQHKYIEKLLDKAGMKGCRGVATPM 720
                   F+LK LG + YFLGIE       G +L Q KYI  LL +  M+ C+ + +PM
Sbjct: 230 LIHKLNSQFALKQLGEVDYFLGIEVHHMPSGGLLLNQSKYIRDLLCRTNMENCKPIGSPM 289

Query: 721 VSSPPLSKF 747
           VSS  LSKF
Sbjct: 290 VSSCRLSKF 298


>gb|KYP62066.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 373

 Score =  248 bits (632), Expect = 2e-77
 Identities = 131/253 (51%), Positives = 166/253 (65%), Gaps = 1/253 (0%)
 Frame = +1

Query: 7   LSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTI 186
           L  LP+++Q +GCKWVF+ K NADGS++K+KARLVAKG+ Q  GFDF ETFS V+KP TI
Sbjct: 9   LVPLPSNRQAVGCKWVFRVKENADGSINKFKARLVAKGFHQVHGFDFHETFSPVIKPITI 68

Query: 187 RVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGLK 366
           R+++++AL+ +W + QLDV+NAFLNG LE  +YM QPPGFE   +K LVCKLNK+LYGLK
Sbjct: 69  RIIITLALTYNWHLFQLDVNNAFLNGILEETVYMVQPPGFE-VEDKSLVCKLNKALYGLK 127

Query: 367 QASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXXX 546
           QA R W  +L   L   GF  SK D  LF    ++  + ++ YVDDIIITGS+       
Sbjct: 128 QAPRQWFDRLKFTLLQFGFQASKCDPSLFMYKHQDQIIFLLVYVDDIIITGSSSQFIQQI 187

Query: 547 XXXXXXFFSLKDLGFLHYFLGIEFKFDKNGAVL-TQHKYIEKLLDKAGMKGCRGVATPMV 723
                  FSLK LG L YFLGIE K   N ++L TQ KYI  LL K  M     +++ M+
Sbjct: 188 TDQLNSTFSLKQLGQLDYFLGIEIKHLPNKSLLMTQSKYIRDLLHKTSMVEAHPISSSML 247

Query: 724 SSPPLSKFDGTRF 762
           S   LSKF    F
Sbjct: 248 SGYKLSKFGADLF 260


>gb|PNX90082.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 446

 Score =  249 bits (637), Expect = 3e-77
 Identities = 124/253 (49%), Positives = 170/253 (67%), Gaps = 2/253 (0%)
 Frame = +1

Query: 4   TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 183
           TL    A+  ++GCKW+F+ K N DGS+++YKARLVAKG+TQ+PG DF ETF+ VVKP T
Sbjct: 7   TLVPRQANTNLVGCKWLFRIKRNPDGSVARYKARLVAKGFTQTPGLDFKETFAPVVKPQT 66

Query: 184 IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGF--EQFPEKRLVCKLNKSLY 357
           I+VVL++AL++ W++ Q+DV+NAFL G+L  D+YM QPPGF   +FP+   VCKL K++Y
Sbjct: 67  IKVVLTLALAQGWSLHQMDVNNAFLQGKLTEDVYMQQPPGFIHAEFPQH--VCKLKKAIY 124

Query: 358 GLKQASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXX 537
           GL+QA RAW   L   + S+GF TS +D  LF    +     ++ YVDD+++TG++    
Sbjct: 125 GLRQAPRAWHDSLKAFVLSVGFCTSLSDPSLFVYTKQGVQAFLLVYVDDLLLTGNDTTFL 184

Query: 538 XXXXXXXXXFFSLKDLGFLHYFLGIEFKFDKNGAVLTQHKYIEKLLDKAGMKGCRGVATP 717
                     FSLK LGF HYFLGIE    K+G +L+QH YI +LL+K  M G + V TP
Sbjct: 185 QHFMTELSTKFSLKQLGFPHYFLGIELIPTKDGLLLSQHGYIRELLNKFNMAGAKSVHTP 244

Query: 718 MVSSPPLSKFDGT 756
           +  S PL   DG+
Sbjct: 245 LCMSTPLKLNDGS 257


>gb|PNX99662.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1046

 Score =  262 bits (669), Expect = 3e-77
 Identities = 133/249 (53%), Positives = 175/249 (70%), Gaps = 1/249 (0%)
 Frame = +1

Query: 4    TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 183
            +L  LPA ++ IGCKWVF+ K N DGS++KYKARLVAKG++Q  GFD+TETFS VVKP T
Sbjct: 565  SLVPLPAHRRAIGCKWVFRIKENPDGSVNKYKARLVAKGFSQEHGFDYTETFSPVVKPVT 624

Query: 184  IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKRLVCKLNKSLYGL 363
            IR++L++A+S  W ++Q+DV+NAFLNG L  ++YM QPPGF    +K LVCKL+K+LYGL
Sbjct: 625  IRIILTLAISFKWDIQQIDVNNAFLNGILHEEVYMVQPPGFVS-TDKTLVCKLHKALYGL 683

Query: 364  KQASRAWSSKLNKVLTSIGFHTSKADTCLFYRHSKNSTVIIMAYVDDIIITGSNDXXXXX 543
            KQA RAW  +L + L   GFH SK D  LF  + K+ T+ ++ YVDDI++TGS+      
Sbjct: 684  KQAPRAWYERLTQALLHFGFHASKCDPSLFVYNHKDVTLYVLVYVDDILLTGSSSALLHD 743

Query: 544  XXXXXXXFFSLKDLGFLHYFLGIEFKFDKNGAV-LTQHKYIEKLLDKAGMKGCRGVATPM 720
                    F+LK +G   YFLGIE K   NG++ LTQ KYI  LL +A M   +G++TPM
Sbjct: 744  LILKLNSQFALKHMGKPDYFLGIEVKHLHNGSILLTQSKYIRDLLHRANMAEAKGISTPM 803

Query: 721  VSSPPLSKF 747
            VSS  LS+F
Sbjct: 804  VSSLKLSRF 812