BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00008485
         (734 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081724.1| RNA polymerase sigma factor sigC isoform X2 ...   339   e-111
ref|XP_020550776.1| RNA polymerase sigma factor sigC isoform X1 ...   339   e-110
ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC ...   332   e-108
gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythra...   308   e-100
ref|XP_022872057.1| RNA polymerase sigma factor sigC [Olea europ...   261   1e-80
gb|KZV42013.1| RNA polymerase sigma factor sigC-like [Dorcoceras...   232   2e-70
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ...   234   4e-70
ref|XP_019175902.1| PREDICTED: RNA polymerase sigma factor sigC-...   231   8e-70
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   234   1e-69
ref|XP_019175901.1| PREDICTED: RNA polymerase sigma factor sigC-...   231   5e-69
ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC ...   228   6e-68
ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC ...   228   1e-67
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC ...   226   5e-67
ref|XP_015167787.1| PREDICTED: RNA polymerase sigma factor sigC ...   226   5e-67
ref|XP_015085648.1| PREDICTED: RNA polymerase sigma factor sigC ...   224   2e-66
ref|XP_019263762.1| PREDICTED: RNA polymerase sigma factor sigC ...   224   3e-66
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ...   224   3e-66
ref|XP_016487978.1| PREDICTED: RNA polymerase sigma factor sigC-...   224   4e-66
ref|XP_019184937.1| PREDICTED: RNA polymerase sigma factor sigC-...   219   1e-64
ref|XP_019070929.1| PREDICTED: RNA polymerase sigma factor sigC ...   219   1e-64

>ref|XP_011081724.1| RNA polymerase sigma factor sigC isoform X2 [Sesamum indicum]
          Length = 556

 Score =  339 bits (869), Expect = e-111
 Identities = 182/244 (74%), Positives = 205/244 (84%)
 Frame = -3

Query: 732 LGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 553
           +GKGSSDGL SLL+  I+TSN++DKLAYLTSLQATQ SQF+LLMKNLD+LEDMFSDSN V
Sbjct: 86  VGKGSSDGLSSLLEKHIETSNSEDKLAYLTSLQATQLSQFRLLMKNLDMLEDMFSDSNVV 145

Query: 552 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 373
           RLERDILEQLERLGALRLF+SCLSRTLKSS S DLSNA  E+VEE +VNDSVDNHV +V 
Sbjct: 146 RLERDILEQLERLGALRLFYSCLSRTLKSSTSFDLSNATTELVEEPKVNDSVDNHVGEV- 204

Query: 372 IQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIAR 193
           ++SG                S I  QELP+ TIS+   Q K+ S RR SRSRNKRQ+IAR
Sbjct: 205 VRSGRKELRKLRRKRMLDKESGITTQELPTVTISK---QHKYASARRASRSRNKRQRIAR 261

Query: 192 NEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDEL 13
           NEAEMS+GVK+VAELEK+RTILEEETGQ+ASLSSWAEAAGIKKKELQQ+L+YGWHCRDEL
Sbjct: 262 NEAEMSSGVKLVAELEKVRTILEEETGQVASLSSWAEAAGIKKKELQQNLHYGWHCRDEL 321

Query: 12  LRST 1
           LRST
Sbjct: 322 LRST 325


>ref|XP_020550776.1| RNA polymerase sigma factor sigC isoform X1 [Sesamum indicum]
          Length = 578

 Score =  339 bits (869), Expect = e-110
 Identities = 182/244 (74%), Positives = 205/244 (84%)
 Frame = -3

Query: 732 LGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 553
           +GKGSSDGL SLL+  I+TSN++DKLAYLTSLQATQ SQF+LLMKNLD+LEDMFSDSN V
Sbjct: 86  VGKGSSDGLSSLLEKHIETSNSEDKLAYLTSLQATQLSQFRLLMKNLDMLEDMFSDSNVV 145

Query: 552 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 373
           RLERDILEQLERLGALRLF+SCLSRTLKSS S DLSNA  E+VEE +VNDSVDNHV +V 
Sbjct: 146 RLERDILEQLERLGALRLFYSCLSRTLKSSTSFDLSNATTELVEEPKVNDSVDNHVGEV- 204

Query: 372 IQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIAR 193
           ++SG                S I  QELP+ TIS+   Q K+ S RR SRSRNKRQ+IAR
Sbjct: 205 VRSGRKELRKLRRKRMLDKESGITTQELPTVTISK---QHKYASARRASRSRNKRQRIAR 261

Query: 192 NEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDEL 13
           NEAEMS+GVK+VAELEK+RTILEEETGQ+ASLSSWAEAAGIKKKELQQ+L+YGWHCRDEL
Sbjct: 262 NEAEMSSGVKLVAELEKVRTILEEETGQVASLSSWAEAAGIKKKELQQNLHYGWHCRDEL 321

Query: 12  LRST 1
           LRST
Sbjct: 322 LRST 325


>ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC [Erythranthe guttata]
          Length = 562

 Score =  332 bits (850), Expect = e-108
 Identities = 178/245 (72%), Positives = 198/245 (80%), Gaps = 1/245 (0%)
 Frame = -3

Query: 732 LGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 553
           LGKGSSD LYSLLD+DIQ   N+DKL  LTS+QATQAS+ +LLMKNLD+LEDMF+DSNAV
Sbjct: 88  LGKGSSDSLYSLLDSDIQIPKNEDKLENLTSVQATQASKLRLLMKNLDVLEDMFADSNAV 147

Query: 552 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEE-RRVNDSVDNHVSKV 376
           RLE DILEQLERLGALRLFHSCLSRT+KS  S DLS+ P EIVEE  RVNDSVDNH+ KV
Sbjct: 148 RLEGDILEQLERLGALRLFHSCLSRTIKSYTSFDLSDGPTEIVEECARVNDSVDNHLGKV 207

Query: 375 FIQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIA 196
           F+ SG                S   +QE PS+TIS+D QQ KF    RT RSRNKRQK A
Sbjct: 208 FVHSGKKELRKLRRKRTSDNESPT-IQESPSKTISKDLQQLKFAIAGRTPRSRNKRQKTA 266

Query: 195 RNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDE 16
           RNEA+MS+GVK VAELEK+RT LE+ETGQIASLS+WAEAAGIKKKELQQHL+YGWHCRDE
Sbjct: 267 RNEADMSSGVKRVAELEKIRTKLEQETGQIASLSNWAEAAGIKKKELQQHLHYGWHCRDE 326

Query: 15  LLRST 1
           LLRST
Sbjct: 327 LLRST 331


>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythranthe guttata]
          Length = 478

 Score =  308 bits (790), Expect = e-100
 Identities = 169/244 (69%), Positives = 188/244 (77%)
 Frame = -3

Query: 732 LGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 553
           LGKGSSD LYSLLD+DIQ   N+DKL  LTS+QATQAS+ +LLMKNLD+LEDMF+DSNAV
Sbjct: 16  LGKGSSDSLYSLLDSDIQIPKNEDKLENLTSVQATQASKLRLLMKNLDVLEDMFADSNAV 75

Query: 552 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 373
           RLE DILEQLERLGALRLFHSCLSRT+KS  S DLS+ P EIVEE            KVF
Sbjct: 76  RLEGDILEQLERLGALRLFHSCLSRTIKSYTSFDLSDGPTEIVEE-----------CKVF 124

Query: 372 IQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIAR 193
           + SG                S   +QE PS+TIS+D QQ KF    RT RSRNKRQK AR
Sbjct: 125 VHSGKKELRKLRRKRTSDNESPT-IQESPSKTISKDLQQLKFAIAGRTPRSRNKRQKTAR 183

Query: 192 NEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDEL 13
           NEA+MS+GVK VAELEK+RT LE+ETGQIASLS+WAEAAGIKKKELQQHL+YGWHCRDEL
Sbjct: 184 NEADMSSGVKRVAELEKIRTKLEQETGQIASLSNWAEAAGIKKKELQQHLHYGWHCRDEL 243

Query: 12  LRST 1
           LRST
Sbjct: 244 LRST 247


>ref|XP_022872057.1| RNA polymerase sigma factor sigC [Olea europaea var. sylvestris]
          Length = 558

 Score =  261 bits (666), Expect = 1e-80
 Identities = 140/243 (57%), Positives = 177/243 (72%)
 Frame = -3

Query: 729 GKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVR 550
           GK S +GLYSL D++IQ S  +DKL +L SLQAT+AS F LLMKNLD LE MFSDS+ + 
Sbjct: 89  GKQSRNGLYSLSDDNIQMSAEEDKLPFLISLQATEASHFSLLMKNLDKLEKMFSDSDVIT 148

Query: 549 LERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFI 370
           LERDIL+QL+RLGALRLFH+CLSR LKSS  +DLS+ P+E+VEE R+N+ V +H  KV +
Sbjct: 149 LERDILQQLKRLGALRLFHTCLSRALKSSTLLDLSDGPMELVEETRINEPVTDHEGKVVV 208

Query: 369 QSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIARN 190
           QSG                +   + E  S+TI  +    K  S RR   +R K+ KI +N
Sbjct: 209 QSGKKEQRRLRRKRALEKGNDSSMLEFSSKTIPGN----KISSRRRHLITRKKKLKITKN 264

Query: 189 EAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELL 10
           EAEMS+GVK+VA+LEK+RT+LEEETGQ+ SL+SWAEAA ++KK LQQ L++GW CRDELL
Sbjct: 265 EAEMSSGVKLVADLEKVRTMLEEETGQVGSLNSWAEAARVEKKTLQQRLHHGWQCRDELL 324

Query: 9   RST 1
           RST
Sbjct: 325 RST 327


>gb|KZV42013.1| RNA polymerase sigma factor sigC-like [Dorcoceras hygrometricum]
          Length = 464

 Score =  232 bits (592), Expect = 2e-70
 Identities = 125/236 (52%), Positives = 162/236 (68%)
 Frame = -3

Query: 708 LYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILE 529
           LY L  +D+Q  N +    YLTSLQATQ S+FKLL++ LD+LEDM++ ++ VRLE DIL+
Sbjct: 9   LYGLHYDDVQVVNKEVDSTYLTSLQATQTSRFKLLVETLDMLEDMYAGTDVVRLEGDILK 68

Query: 528 QLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXX 349
           QLERLGALR FH+CLS T++S         P ++VEE  VNDSV  H SK+   +G    
Sbjct: 69  QLERLGALRYFHACLSSTVQS--------VPAKLVEEPGVNDSVTGHSSKLVFSTGRKEL 120

Query: 348 XXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIARNEAEMSTG 169
                       +   +QE   ETIS + + PK +   R SRSRNKR K+A+NEAE+S+ 
Sbjct: 121 RKLRRKRVSENENDSSMQEFGLETISNNIKPPKLI---RQSRSRNKRLKVAKNEAELSSS 177

Query: 168 VKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLRST 1
           VK+VAELEK+R ILE ET ++A+LSSWAEA G++KKEL  HL+YGWHC DEL+RST
Sbjct: 178 VKLVAELEKIRLILEAETNEVATLSSWAEATGLEKKELLHHLHYGWHCMDELVRST 233


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
 emb|CBI20603.3| unnamed protein product, partial [Vitis vinifera]
          Length = 561

 Score =  234 bits (596), Expect = 4e-70
 Identities = 128/244 (52%), Positives = 165/244 (67%)
 Frame = -3

Query: 732 LGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 553
           +GK S   L+ ++ N  Q    +D  A +  LQA++ASQF LL++NLDILE+MF+DSN V
Sbjct: 89  IGKCSHGDLFKIV-NASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMV 147

Query: 552 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 373
           RLERDI+ QL RLGAL+LF  CLSRTLK+S S DL +AP E + E + N +VD+H+ KV 
Sbjct: 148 RLERDIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVV 207

Query: 372 IQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIAR 193
           ++SG                  IY   LPS+TI +   +P   + +RT  SR KR   A+
Sbjct: 208 VRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAK 267

Query: 192 NEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDEL 13
           NEAEMS GVK+VA LE++R  LEEE G +ASLS+WAEAAG+ KK LQQ L +GW+CRDEL
Sbjct: 268 NEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDEL 327

Query: 12  LRST 1
           LRST
Sbjct: 328 LRST 331


>ref|XP_019175902.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
           [Ipomoea nil]
          Length = 471

 Score =  231 bits (588), Expect = 8e-70
 Identities = 121/244 (49%), Positives = 170/244 (69%)
 Frame = -3

Query: 732 LGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 553
           +G+GS  GLY+   N++  S  +DKL +L S   ++A  F  LM+NL++LE +F+DS+ V
Sbjct: 3   IGRGSQSGLYTRTCNNVDMSVQEDKLPFLES---SKAKHFGFLMQNLEMLEHIFADSDGV 59

Query: 552 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 373
           RLERDIL QLER+GAL LFH+CL RTLKSS S +L++ P+E+VEE + +  V+ +V K F
Sbjct: 60  RLERDILVQLERIGALELFHTCLERTLKSSTSSNLTDVPIELVEEIQEDGLVNVNVDKSF 119

Query: 372 IQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIAR 193
           + SG                  + ++ LP      D +QPK  S ++   SRN+RQ IA+
Sbjct: 120 VSSGKRQERESRRKRQPKNTRGVKVELLPKRF--EDPRQPKLSSGKKLGNSRNRRQSIAK 177

Query: 192 NEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDEL 13
           NE EMS G+K+VAELE+LR++LEEETG++AS S+WA+AAG+ +K LQQ L++GW+CRDEL
Sbjct: 178 NEIEMSIGIKVVAELERLRSVLEEETGRVASSSAWAKAAGLSQKILQQRLHFGWYCRDEL 237

Query: 12  LRST 1
           LRST
Sbjct: 238 LRST 241


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  234 bits (596), Expect = 1e-69
 Identities = 128/244 (52%), Positives = 165/244 (67%)
 Frame = -3

Query: 732 LGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 553
           +GK S   L+ ++ N  Q    +D  A +  LQA++ASQF LL++NLDILE+MF+DSN V
Sbjct: 139 IGKCSHGDLFKIV-NASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMV 197

Query: 552 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 373
           RLERDI+ QL RLGAL+LF  CLSRTLK+S S DL +AP E + E + N +VD+H+ KV 
Sbjct: 198 RLERDIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVV 257

Query: 372 IQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIAR 193
           ++SG                  IY   LPS+TI +   +P   + +RT  SR KR   A+
Sbjct: 258 VRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAK 317

Query: 192 NEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDEL 13
           NEAEMS GVK+VA LE++R  LEEE G +ASLS+WAEAAG+ KK LQQ L +GW+CRDEL
Sbjct: 318 NEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDEL 377

Query: 12  LRST 1
           LRST
Sbjct: 378 LRST 381


>ref|XP_019175901.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1
           [Ipomoea nil]
          Length = 553

 Score =  231 bits (588), Expect = 5e-69
 Identities = 121/244 (49%), Positives = 170/244 (69%)
 Frame = -3

Query: 732 LGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 553
           +G+GS  GLY+   N++  S  +DKL +L S   ++A  F  LM+NL++LE +F+DS+ V
Sbjct: 85  IGRGSQSGLYTRTCNNVDMSVQEDKLPFLES---SKAKHFGFLMQNLEMLEHIFADSDGV 141

Query: 552 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 373
           RLERDIL QLER+GAL LFH+CL RTLKSS S +L++ P+E+VEE + +  V+ +V K F
Sbjct: 142 RLERDILVQLERIGALELFHTCLERTLKSSTSSNLTDVPIELVEEIQEDGLVNVNVDKSF 201

Query: 372 IQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIAR 193
           + SG                  + ++ LP      D +QPK  S ++   SRN+RQ IA+
Sbjct: 202 VSSGKRQERESRRKRQPKNTRGVKVELLPKRF--EDPRQPKLSSGKKLGNSRNRRQSIAK 259

Query: 192 NEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDEL 13
           NE EMS G+K+VAELE+LR++LEEETG++AS S+WA+AAG+ +K LQQ L++GW+CRDEL
Sbjct: 260 NEIEMSIGIKVVAELERLRSVLEEETGRVASSSAWAKAAGLSQKILQQRLHFGWYCRDEL 319

Query: 12  LRST 1
           LRST
Sbjct: 320 LRST 323


>ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
           sylvestris]
 ref|XP_016482950.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
           [Nicotiana tabacum]
          Length = 554

 Score =  228 bits (581), Expect = 6e-68
 Identities = 126/245 (51%), Positives = 169/245 (68%), Gaps = 1/245 (0%)
 Frame = -3

Query: 732 LGKGSSDGLYSLLDND-IQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNA 556
           +G+GS   +Y  + +D    S + +K +YL++   T+A  F LLMKN+D+LE+MF+DS  
Sbjct: 85  IGRGSPSNIYGDIGSDKTGISPDGEKPSYLST---TRAPHFSLLMKNIDLLENMFADSEM 141

Query: 555 VRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKV 376
            RLE DIL QLE+LGAL  FHS LSRTL S+ S ++ + P E+VEE   +D V N + KV
Sbjct: 142 SRLENDILVQLEKLGALEFFHSRLSRTLHST-SPEVLDVPRELVEEIEKDDLVGNGIDKV 200

Query: 375 FIQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIA 196
            ++S                 + I      ++ I  D QQPKF S +RT  SRNKRQKIA
Sbjct: 201 VVRSRKKQERNSRRNRASGIANDIITVHPHTKNIQEDMQQPKFYSGKRTHASRNKRQKIA 260

Query: 195 RNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDE 16
           +NEAEMS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQ HL++GW+CRDE
Sbjct: 261 KNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLHFGWYCRDE 320

Query: 15  LLRST 1
           LL+ST
Sbjct: 321 LLKST 325


>ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
           sylvestris]
 ref|XP_016482949.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1
           [Nicotiana tabacum]
          Length = 584

 Score =  228 bits (581), Expect = 1e-67
 Identities = 126/245 (51%), Positives = 169/245 (68%), Gaps = 1/245 (0%)
 Frame = -3

Query: 732 LGKGSSDGLYSLLDND-IQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNA 556
           +G+GS   +Y  + +D    S + +K +YL++   T+A  F LLMKN+D+LE+MF+DS  
Sbjct: 115 IGRGSPSNIYGDIGSDKTGISPDGEKPSYLST---TRAPHFSLLMKNIDLLENMFADSEM 171

Query: 555 VRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKV 376
            RLE DIL QLE+LGAL  FHS LSRTL S+ S ++ + P E+VEE   +D V N + KV
Sbjct: 172 SRLENDILVQLEKLGALEFFHSRLSRTLHST-SPEVLDVPRELVEEIEKDDLVGNGIDKV 230

Query: 375 FIQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIA 196
            ++S                 + I      ++ I  D QQPKF S +RT  SRNKRQKIA
Sbjct: 231 VVRSRKKQERNSRRNRASGIANDIITVHPHTKNIQEDMQQPKFYSGKRTHASRNKRQKIA 290

Query: 195 RNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDE 16
           +NEAEMS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQ HL++GW+CRDE
Sbjct: 291 KNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLHFGWYCRDE 350

Query: 15  LLRST 1
           LL+ST
Sbjct: 351 LLKST 355


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Solanum
           tuberosum]
          Length = 555

 Score =  226 bits (575), Expect = 5e-67
 Identities = 123/244 (50%), Positives = 166/244 (68%), Gaps = 1/244 (0%)
 Frame = -3

Query: 729 GKGSSDGLYSLL-DNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 553
           G+GS   +Y  +  + I  S + +K  YL +   T++  F LLMKNLD+LE+MF+DS   
Sbjct: 86  GRGSPSNVYGDIGSHKIGISPDGEKPTYLNT---TKSLHFSLLMKNLDLLENMFADSEMS 142

Query: 552 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 373
           RLERDIL QLE+LGAL  FH+CLSRT  SS    + + P E+++E   +D V N + KV 
Sbjct: 143 RLERDILVQLEKLGALEFFHTCLSRTHHSSTFPKVLDVPRELIKEVEKDDLVGNAIDKVV 202

Query: 372 IQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIAR 193
           ++S                 + I   +  ++ I  D QQPKF S +RT  SRNKRQKIA+
Sbjct: 203 VRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFYSGKRTQASRNKRQKIAK 262

Query: 192 NEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDEL 13
           NEAEMS GVK+VA+LE++R+ILEEETG++A+ SSWAEAAGI++KELQQ L++GW+CRDEL
Sbjct: 263 NEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEAAGIEQKELQQRLHFGWYCRDEL 322

Query: 12  LRST 1
           L+ST
Sbjct: 323 LKST 326


>ref|XP_015167787.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Solanum
           tuberosum]
          Length = 560

 Score =  226 bits (575), Expect = 5e-67
 Identities = 123/244 (50%), Positives = 166/244 (68%), Gaps = 1/244 (0%)
 Frame = -3

Query: 729 GKGSSDGLYSLL-DNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 553
           G+GS   +Y  +  + I  S + +K  YL +   T++  F LLMKNLD+LE+MF+DS   
Sbjct: 91  GRGSPSNVYGDIGSHKIGISPDGEKPTYLNT---TKSLHFSLLMKNLDLLENMFADSEMS 147

Query: 552 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 373
           RLERDIL QLE+LGAL  FH+CLSRT  SS    + + P E+++E   +D V N + KV 
Sbjct: 148 RLERDILVQLEKLGALEFFHTCLSRTHHSSTFPKVLDVPRELIKEVEKDDLVGNAIDKVV 207

Query: 372 IQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIAR 193
           ++S                 + I   +  ++ I  D QQPKF S +RT  SRNKRQKIA+
Sbjct: 208 VRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFYSGKRTQASRNKRQKIAK 267

Query: 192 NEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDEL 13
           NEAEMS GVK+VA+LE++R+ILEEETG++A+ SSWAEAAGI++KELQQ L++GW+CRDEL
Sbjct: 268 NEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEAAGIEQKELQQRLHFGWYCRDEL 327

Query: 12  LRST 1
           L+ST
Sbjct: 328 LKST 331


>ref|XP_015085648.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum pennellii]
          Length = 551

 Score =  224 bits (570), Expect = 2e-66
 Identities = 116/215 (53%), Positives = 153/215 (71%)
 Frame = -3

Query: 645 TSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKS 466
           T +  T++  F LLMKNLD+LE+MF+DS   RLERDIL QLE+LGAL  FH+CLSRT  S
Sbjct: 108 TYINTTKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHS 167

Query: 465 SDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELP 286
           S    + + P E+++E   +D V N + KV ++S                 + I   +  
Sbjct: 168 STFPKVLDVPRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPH 227

Query: 285 SETISRDFQQPKFVSPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQI 106
           ++ I  D QQPKF S +RT  SRNKRQKIA+NEAEMS GVK+VA+LE++R+ILEEETG++
Sbjct: 228 TKNIQEDLQQPKFYSGKRTHASRNKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGRV 287

Query: 105 ASLSSWAEAAGIKKKELQQHLYYGWHCRDELLRST 1
           A+ SSWAEAAGI++KELQQHL++GW+CRDELL+ST
Sbjct: 288 ATFSSWAEAAGIEQKELQQHLHFGWYCRDELLKST 322


>ref|XP_019263762.1| PREDICTED: RNA polymerase sigma factor sigC [Nicotiana attenuata]
 gb|OIT36910.1| rna polymerase sigma factor sigc [Nicotiana attenuata]
          Length = 555

 Score =  224 bits (570), Expect = 3e-66
 Identities = 123/245 (50%), Positives = 168/245 (68%), Gaps = 1/245 (0%)
 Frame = -3

Query: 732 LGKGSSDGLYSLLDND-IQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNA 556
           +G+GS   +Y  + +D I  S + +K  YL +   T+A  F LLMKN+D+LE+MF+DS  
Sbjct: 86  IGRGSPSNIYGDIGSDKIGISPDGEKPLYLNT---TRAPHFSLLMKNIDLLENMFADSEM 142

Query: 555 VRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKV 376
            RLE +IL QLE+LGAL  FHS LSRTL S+   ++ + P +++EE   +D V N ++KV
Sbjct: 143 SRLENNILVQLEKLGALEFFHSRLSRTLHSTFP-EVLDVPRDLIEEIEKDDLVGNGINKV 201

Query: 375 FIQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIA 196
            ++S                 + I      ++ I  D QQPKF S +RT  SRNKRQKIA
Sbjct: 202 VVRSRKKQERKSRRNRASGIANDIITVHPHTKNIQEDMQQPKFYSGKRTHASRNKRQKIA 261

Query: 195 RNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDE 16
           +NEAEMS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQ HL++GW+CRDE
Sbjct: 262 KNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLHFGWYCRDE 321

Query: 15  LLRST 1
           LL+ST
Sbjct: 322 LLKST 326


>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC [Nicotiana
           tomentosiformis]
          Length = 572

 Score =  224 bits (571), Expect = 3e-66
 Identities = 123/246 (50%), Positives = 163/246 (66%), Gaps = 2/246 (0%)
 Frame = -3

Query: 732 LGKGSSDGLYSLLDNDIQTSNNKDKL--AYLTSLQATQASQFKLLMKNLDILEDMFSDSN 559
           +G+GS   +Y     DI +  N   L     T L  T+A  F LLMKNLD+LE+MF+DS 
Sbjct: 102 IGRGSPTNIYG----DIGSPKNVISLDGEKPTYLNTTRALHFSLLMKNLDLLENMFADSE 157

Query: 558 AVRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSK 379
             RLERDI+ QL++LGAL  FH+CLSRT   S   ++ + P E++EE   +  V N + K
Sbjct: 158 VSRLERDIMVQLDKLGALEFFHTCLSRTNHCSTFPEVLDVPRELIEEIEKDGLVGNGIDK 217

Query: 378 VFIQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKI 199
           V ++S                 + I   +  ++ I  D QQPKF S +RT  SRNKRQKI
Sbjct: 218 VVVRSKKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFFSGKRTHTSRNKRQKI 277

Query: 198 ARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRD 19
           A+NEAEMS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQQ L++GW+CRD
Sbjct: 278 AKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQQRLHFGWYCRD 337

Query: 18  ELLRST 1
           ELL+ST
Sbjct: 338 ELLKST 343


>ref|XP_016487978.1| PREDICTED: RNA polymerase sigma factor sigC-like [Nicotiana
           tabacum]
          Length = 572

 Score =  224 bits (570), Expect = 4e-66
 Identities = 122/247 (49%), Positives = 162/247 (65%), Gaps = 3/247 (1%)
 Frame = -3

Query: 732 LGKGSSDGLYSLLD---NDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDS 562
           +G+GS   +Y  +    N I     K      T L  T+A  F LLMKNLD+LE+MF+DS
Sbjct: 102 IGRGSPTNIYGDIGSPKNGITLDGEKP-----TYLNTTRALHFSLLMKNLDLLENMFADS 156

Query: 561 NAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVS 382
              RLERDI+ QL++LGAL  FH+CLSRT   S   ++ + P E++EE   +  V N + 
Sbjct: 157 EVSRLERDIMVQLDKLGALEFFHTCLSRTNHCSTFPEVLDVPRELIEEIEKDGLVGNGID 216

Query: 381 KVFIQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQK 202
           KV ++S                 + I   +  ++ I  D QQPKF S +RT  SRNKRQK
Sbjct: 217 KVVVRSKKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFFSGKRTHTSRNKRQK 276

Query: 201 IARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCR 22
           IA+NEAEMS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQQ L++GW+CR
Sbjct: 277 IAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQQRLHFGWYCR 336

Query: 21  DELLRST 1
           DELL+ST
Sbjct: 337 DELLKST 343


>ref|XP_019184937.1| PREDICTED: RNA polymerase sigma factor sigC-like [Ipomoea nil]
          Length = 555

 Score =  219 bits (559), Expect = 1e-64
 Identities = 120/244 (49%), Positives = 160/244 (65%)
 Frame = -3

Query: 732 LGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 553
           +G GS   LY ++ N+ +    +DKL +L S   ++  QF LLMKNLD+LE++F+DS  V
Sbjct: 85  IGVGSHSSLYDVIGNNREVLTEEDKLKFLKS---SKGKQFSLLMKNLDLLENIFADSCVV 141

Query: 552 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 373
            LERDIL QLERLGAL LF++ LSR  KS    DL+N P E+V E + ND ++ H++K+ 
Sbjct: 142 GLERDILAQLERLGALELFNTFLSRGQKSFPFSDLTNRPTELVHETQENDLLNIHMNKIV 201

Query: 372 IQSGXXXXXXXXXXXXXXXXSAIYLQELPSETISRDFQQPKFVSPRRTSRSRNKRQKIAR 193
           + SG                S ++   L  +T   + + P   S +     RN R+KIA 
Sbjct: 202 VTSGKKQERELRRRKRSDTNSDVFTLHLQPKTSKLESKYPNISSGKTWRNFRNTREKIAS 261

Query: 192 NEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDEL 13
           +EAEMS GVK+VAELE +RTILEEETG++AS SSWAEAAG+ +K LQQ L+YGW+CRDEL
Sbjct: 262 SEAEMSKGVKVVAELESIRTILEEETGRVASFSSWAEAAGLSQKVLQQRLHYGWYCRDEL 321

Query: 12  LRST 1
           LRST
Sbjct: 322 LRST 325


>ref|XP_019070929.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Solanum
           lycopersicum]
          Length = 529

 Score =  219 bits (557), Expect = 1e-64
 Identities = 115/215 (53%), Positives = 151/215 (70%)
 Frame = -3

Query: 645 TSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKS 466
           T L  T++  F LLMKNLD+LE+MF+DS   RLERDIL QLE+LGAL  FH+CLSRT  S
Sbjct: 86  TYLNTTKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHS 145

Query: 465 SDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELP 286
           S    + + P E+++E   +D V N + KV ++S                 + I   +  
Sbjct: 146 SSFPKVLDVPRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPH 205

Query: 285 SETISRDFQQPKFVSPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQI 106
           ++ I  D QQ KF S +RT  SR KRQKIA+NEAEMS GVK+VA+LE++R+ILEEETGQ+
Sbjct: 206 TKNIQEDLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQV 265

Query: 105 ASLSSWAEAAGIKKKELQQHLYYGWHCRDELLRST 1
           A+ SSWA+AAGI++KELQQHL++GW+CRDELL+ST
Sbjct: 266 ATFSSWAKAAGIEQKELQQHLHFGWYCRDELLKST 300