BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00008298
         (435 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020550184.1| pentatricopeptide repeat-containing protein ...   134   1e-34
ref|XP_011082908.1| pentatricopeptide repeat-containing protein ...   134   2e-34
gb|PIN25620.1| hypothetical protein CDL12_01623 [Handroanthus im...   124   1e-30
gb|PIN00610.1| hypothetical protein CDL12_26885 [Handroanthus im...   124   1e-30
ref|XP_012846716.1| PREDICTED: pentatricopeptide repeat-containi...   124   3e-30
gb|KZV19414.1| pentatricopeptide repeat-containing protein chlor...   118   2e-28
ref|XP_022877310.1| pentatricopeptide repeat-containing protein ...   116   1e-27
gb|PHT51755.1| Pentatricopeptide repeat-containing protein, chlo...    95   4e-22
ref|XP_011044784.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-21
ref|XP_017254742.1| PREDICTED: pentatricopeptide repeat-containi...    99   2e-21
ref|XP_019153772.1| PREDICTED: pentatricopeptide repeat-containi...    99   3e-21
ref|XP_009598200.1| PREDICTED: pentatricopeptide repeat-containi...    98   5e-21
ref|XP_024180280.1| pentatricopeptide repeat-containing protein ...    98   5e-21
ref|XP_007048864.2| PREDICTED: pentatricopeptide repeat-containi...    98   7e-21
gb|EOX93021.1| Pentatricopeptide repeat (PPR-like) superfamily p...    98   7e-21
ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi...    98   7e-21
ref|XP_023877683.1| pentatricopeptide repeat-containing protein ...    97   9e-21
ref|XP_023747134.1| pentatricopeptide repeat-containing protein ...    97   9e-21
ref|XP_015880153.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-20
ref|XP_009762871.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-20

>ref|XP_020550184.1| pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic isoform X2 [Sesamum indicum]
          Length = 463

 Score =  134 bits (338), Expect = 1e-34
 Identities = 66/75 (88%), Positives = 69/75 (92%), Gaps = 2/75 (2%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           MPPCF SFNPPSTSISKFISDQPFLSMLETNCH+IKDLKKIHAH+IKTGLAKD +AASRV
Sbjct: 1   MPPCFCSFNPPSTSISKFISDQPFLSMLETNCHTIKDLKKIHAHIIKTGLAKDAVAASRV 60

Query: 395 LAFCATA--RDLDYA 433
           LAFCAT   RDL YA
Sbjct: 61  LAFCATGPDRDLVYA 75


>ref|XP_011082908.1| pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic isoform X1 [Sesamum indicum]
          Length = 520

 Score =  134 bits (338), Expect = 2e-34
 Identities = 66/75 (88%), Positives = 69/75 (92%), Gaps = 2/75 (2%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           MPPCF SFNPPSTSISKFISDQPFLSMLETNCH+IKDLKKIHAH+IKTGLAKD +AASRV
Sbjct: 1   MPPCFCSFNPPSTSISKFISDQPFLSMLETNCHTIKDLKKIHAHIIKTGLAKDAVAASRV 60

Query: 395 LAFCATA--RDLDYA 433
           LAFCAT   RDL YA
Sbjct: 61  LAFCATGPDRDLVYA 75


>gb|PIN25620.1| hypothetical protein CDL12_01623 [Handroanthus impetiginosus]
          Length = 510

 Score =  124 bits (312), Expect = 1e-30
 Identities = 61/75 (81%), Positives = 67/75 (89%), Gaps = 2/75 (2%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           MPPCF  FNPPSTSISKFISDQPFLS+LET C +IKDL+KIHA +IKTGLAKDTIAASR+
Sbjct: 1   MPPCFCCFNPPSTSISKFISDQPFLSLLETKCQTIKDLRKIHAQVIKTGLAKDTIAASRI 60

Query: 395 LAFCAT--ARDLDYA 433
           LA CAT  ARD+DYA
Sbjct: 61  LASCATGPARDMDYA 75


>gb|PIN00610.1| hypothetical protein CDL12_26885 [Handroanthus impetiginosus]
          Length = 510

 Score =  124 bits (312), Expect = 1e-30
 Identities = 61/75 (81%), Positives = 67/75 (89%), Gaps = 2/75 (2%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           MPPCF  FNPPSTSISKFISDQPFLS+LET C +IKDL+KIHA +IKTGLAKDTIAASR+
Sbjct: 1   MPPCFCCFNPPSTSISKFISDQPFLSLLETKCQTIKDLRKIHAQVIKTGLAKDTIAASRI 60

Query: 395 LAFCAT--ARDLDYA 433
           LA CAT  ARD+DYA
Sbjct: 61  LASCATGPARDMDYA 75


>ref|XP_012846716.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Erythranthe guttata]
          Length = 611

 Score =  124 bits (311), Expect = 3e-30
 Identities = 66/86 (76%), Positives = 69/86 (80%), Gaps = 6/86 (6%)
 Frame = +2

Query: 194 KVNIYPR---MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGL 364
           KV  YP     PPCF S NP STSISKFISDQPFLS+LETNCH+IKDL KIHA LIKTGL
Sbjct: 80  KVGGYPIPSIKPPCFCSSNPASTSISKFISDQPFLSLLETNCHTIKDLTKIHAQLIKTGL 139

Query: 365 AKDTIAASRVLAFCAT---ARDLDYA 433
           AKDTIA SR+LAFCA    ARDLDYA
Sbjct: 140 AKDTIAVSRILAFCAAPGPARDLDYA 165


>gb|KZV19414.1| pentatricopeptide repeat-containing protein chloroplastic-like
           [Dorcoceras hygrometricum]
          Length = 532

 Score =  118 bits (296), Expect = 2e-28
 Identities = 60/75 (80%), Positives = 65/75 (86%), Gaps = 2/75 (2%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           MPPCF SF+PPSTSISKFIS QPFLSMLET C +I+DLK IHA L+KTGL KDTIAASRV
Sbjct: 1   MPPCFCSFSPPSTSISKFISAQPFLSMLETECSTIQDLKIIHAQLVKTGLVKDTIAASRV 60

Query: 395 LAFCAT--ARDLDYA 433
           LAFCAT  A D+DYA
Sbjct: 61  LAFCATSPACDMDYA 75


>ref|XP_022877310.1| pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Olea europaea var. sylvestris]
          Length = 525

 Score =  116 bits (290), Expect = 1e-27
 Identities = 58/77 (75%), Positives = 64/77 (83%), Gaps = 4/77 (5%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           MPPCF   NPPSTSI+KFISDQP LSMLET C ++KDLK IHAHLIKTGLAKD I ASRV
Sbjct: 1   MPPCFCFCNPPSTSITKFISDQPILSMLETKCKTMKDLKTIHAHLIKTGLAKDIIVASRV 60

Query: 395 LAFCATAR----DLDYA 433
           LAFCAT+R    D++YA
Sbjct: 61  LAFCATSRGGGGDINYA 77


>gb|PHT51755.1| Pentatricopeptide repeat-containing protein, chloroplastic
           [Capsicum baccatum]
          Length = 152

 Score = 95.1 bits (235), Expect = 4e-22
 Identities = 50/76 (65%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           MPP   S NP STSISKFIS QP+L MLET C ++ D+KKIHAHLIK+GL KD IAASRV
Sbjct: 1   MPPSVCSSNPSSTSISKFISKQPYLHMLETKCSTMTDVKKIHAHLIKSGLIKDKIAASRV 60

Query: 395 LAFCATA---RDLDYA 433
           LAF A +    D++YA
Sbjct: 61  LAFSAKSPPNGDINYA 76


>ref|XP_011044784.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Populus euphratica]
 ref|XP_011044785.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Populus euphratica]
          Length = 535

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 52/74 (70%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           M PC  S  P   SISKFISDQP+LSML+ NC S+KDL+KIHA LIKTGLAKD IAASRV
Sbjct: 1   MIPCCCSLIPSPASISKFISDQPYLSMLDKNCTSMKDLQKIHAQLIKTGLAKDPIAASRV 60

Query: 395 LAFCAT-ARDLDYA 433
           LAFC + A D++YA
Sbjct: 61  LAFCTSPAGDINYA 74


>ref|XP_017254742.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Daucus carota subsp. sativus]
          Length = 542

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 5/78 (6%)
 Frame = +2

Query: 215 MPPCFLSFNPP---STSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAA 385
           MP CF S   P   S++ISKFISD P+L++LET C+S+KDL+KIHA LIKTGL KDTIAA
Sbjct: 1   MPYCFCSSFTPVPSSSNISKFISDNPYLTLLETKCNSMKDLRKIHAQLIKTGLVKDTIAA 60

Query: 386 SRVLAFCAT--ARDLDYA 433
           SRVL+FCAT  A DL+YA
Sbjct: 61  SRVLSFCATSPAGDLNYA 78


>ref|XP_019153772.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Ipomoea nil]
          Length = 532

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 52/75 (69%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           M PCF +  P S SISKFIS+QP+LSMLE  C S+KDLKKIHA LIKTGL  D IAASRV
Sbjct: 1   MAPCFFAVAPSSPSISKFISEQPYLSMLENKCTSMKDLKKIHAQLIKTGLINDPIAASRV 60

Query: 395 LAFCAT--ARDLDYA 433
           LAF AT  A D++YA
Sbjct: 61  LAFSATSPASDINYA 75


>ref|XP_009598200.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Nicotiana tomentosiformis]
          Length = 526

 Score = 98.2 bits (243), Expect = 5e-21
 Identities = 52/75 (69%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           MP  F S+NP STSISKFISDQP+L MLET C +I DLKKIHA LIKTGL KD IA+SRV
Sbjct: 1   MPSYFCSYNPSSTSISKFISDQPYLYMLETKCTTITDLKKIHAQLIKTGLIKDKIASSRV 60

Query: 395 LAFCATA--RDLDYA 433
           LAF A +   D++YA
Sbjct: 61  LAFSAKSPTGDINYA 75


>ref|XP_024180280.1| pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Rosa chinensis]
 gb|PRQ52078.1| putative tetratricopeptide-like helical domain-containing protein
           [Rosa chinensis]
          Length = 542

 Score = 98.2 bits (243), Expect = 5e-21
 Identities = 52/74 (70%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           M PC  SF   STSISKFISD+P LSMLE  C ++KDL+KIHAHLIKTGLA DT+AASRV
Sbjct: 1   MTPCCCSFTS-STSISKFISDKPHLSMLENQCTNMKDLQKIHAHLIKTGLANDTVAASRV 59

Query: 395 LAFCAT-ARDLDYA 433
           LAFCA+ A +++YA
Sbjct: 60  LAFCASPAGNINYA 73


>ref|XP_007048864.2| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Theobroma cacao]
          Length = 538

 Score = 97.8 bits (242), Expect = 7e-21
 Identities = 49/74 (66%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           M  CF S  P   SI+KFISDQP+LS+LE NC S+KDLKK+HA LIKTGL  D IAASRV
Sbjct: 1   MVQCFCSLTPSPASITKFISDQPYLSLLENNCTSMKDLKKLHAQLIKTGLVNDIIAASRV 60

Query: 395 LAFCAT-ARDLDYA 433
           LAFC + A D++YA
Sbjct: 61  LAFCVSPAGDMNYA 74


>gb|EOX93021.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao]
          Length = 538

 Score = 97.8 bits (242), Expect = 7e-21
 Identities = 49/74 (66%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           M  CF S  P   SI+KFISDQP+LS+LE NC S+KDLKK+HA LIKTGL  D IAASRV
Sbjct: 1   MVQCFCSLTPSPASITKFISDQPYLSLLENNCTSMKDLKKLHAQLIKTGLVNDIIAASRV 60

Query: 395 LAFCAT-ARDLDYA 433
           LAFC + A D++YA
Sbjct: 61  LAFCVSPAGDMNYA 74


>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Fragaria vesca subsp. vesca]
          Length = 550

 Score = 97.8 bits (242), Expect = 7e-21
 Identities = 52/74 (70%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           M PC  SF   STSISKFISD+P L MLE  C ++KDL+KIHAHLIKTGLA DT+AASRV
Sbjct: 1   MTPCCCSFTS-STSISKFISDKPHLFMLENQCTNMKDLQKIHAHLIKTGLANDTVAASRV 59

Query: 395 LAFCAT-ARDLDYA 433
           LAFCA+ A D++YA
Sbjct: 60  LAFCASPAGDINYA 73


>ref|XP_023877683.1| pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Quercus suber]
          Length = 539

 Score = 97.4 bits (241), Expect = 9e-21
 Identities = 50/71 (70%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
 Frame = +2

Query: 224 CFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRVLAF 403
           C L+    STSISKFISDQP+L+MLE  C ++KDL+KIHA+LIKTGLAKDTIAASR+LAF
Sbjct: 7   CSLTSLSSSTSISKFISDQPYLTMLEKQCTNMKDLQKIHANLIKTGLAKDTIAASRILAF 66

Query: 404 CAT-ARDLDYA 433
           CA+ A D++YA
Sbjct: 67  CASPAGDMNYA 77


>ref|XP_023747134.1| pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Lactuca sativa]
 gb|PLY63691.1| hypothetical protein LSAT_9X67160 [Lactuca sativa]
          Length = 542

 Score = 97.4 bits (241), Expect = 9e-21
 Identities = 52/78 (66%), Positives = 61/78 (78%), Gaps = 5/78 (6%)
 Frame = +2

Query: 215 MPPCFLSFNP---PSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAA 385
           M PCF S NP    STSIS+FISDQP+LS+LET C +IKDL+ IHA +IKTGL KDTIAA
Sbjct: 1   MAPCFCSLNPLPSSSTSISQFISDQPYLSILETKCSTIKDLQIIHAQIIKTGLIKDTIAA 60

Query: 386 SRVLAFCAT--ARDLDYA 433
           SR+L+F AT  A D+ YA
Sbjct: 61  SRLLSFAATSPAADISYA 78


>ref|XP_015880153.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Ziziphus jujuba]
          Length = 525

 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 50/74 (67%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           M PC  S  P STSISKFISDQP+L+MLE +C ++ DL+KIHA  IK GLAKDTIAASR+
Sbjct: 1   MIPCCCSQTPSSTSISKFISDQPYLTMLEKHCTTMTDLQKIHAQFIKIGLAKDTIAASRL 60

Query: 395 LAFCAT-ARDLDYA 433
           LAFCA+ A ++DYA
Sbjct: 61  LAFCASPAGNMDYA 74


>ref|XP_009762871.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Nicotiana sylvestris]
          Length = 525

 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 51/75 (68%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
 Frame = +2

Query: 215 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHSIKDLKKIHAHLIKTGLAKDTIAASRV 394
           MP  F S+NP STSISKFISDQP+L +LET C +I DLKKIHA LIKTGL KD IA+SRV
Sbjct: 1   MPSYFCSYNPSSTSISKFISDQPYLYLLETKCKTITDLKKIHAQLIKTGLIKDKIASSRV 60

Query: 395 LAFCA--TARDLDYA 433
           LAF A     D++YA
Sbjct: 61  LAFSAKFPTGDINYA 75