BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00008156
         (600 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN07280.1| Heterogeneous nuclear ribonucleoprotein R (RRM su...   103   4e-28
gb|PIN03866.1| Heterogeneous nuclear ribonucleoprotein R (RRM su...   102   7e-28
ref|XP_011077857.1| heterogeneous nuclear ribonucleoprotein R-li...    95   4e-19
ref|XP_021908589.1| LOW QUALITY PROTEIN: heterogeneous nuclear r...    60   3e-07
gb|PHU06432.1| hypothetical protein BC332_22921 [Capsicum chinense]    57   6e-06

>gb|PIN07280.1| Heterogeneous nuclear ribonucleoprotein R (RRM superfamily)
           [Handroanthus impetiginosus]
          Length = 539

 Score =  103 bits (256), Expect(2) = 4e-28
 Identities = 58/114 (50%), Positives = 64/114 (56%)
 Frame = -2

Query: 344 CWRCKMPRTRANAAATKSPEPEKPVETEEHVELGADNDTXXXXXXXXXXXXXXXXXXXXX 165
           CW+ KMPR R +AAA KS E EKPVETEE VELG DNDT                     
Sbjct: 48  CWKHKMPRARGSAAAIKSAEAEKPVETEEQVELGGDNDT---EEEEVEYEEVEEEVEEEE 104

Query: 164 XXXXXXXXXXXXXXXEDDAHRHDTQKESDGDDDMENAEGDEELEKKRSELLALP 3
                          EDD HRHD +KE+D DDDMEN E +EEL+KK SELLALP
Sbjct: 105 EEEVEEEEEEEEEEEEDDGHRHDARKENDCDDDMENVEDEEELKKKHSELLALP 158



 Score = 49.7 bits (117), Expect(2) = 4e-28
 Identities = 25/45 (55%), Positives = 27/45 (60%)
 Frame = -3

Query: 487 MEPILSKFLLWSSXXXXXXXXXXXXXXHSFANASGFCAFLRAALE 353
           MEPI S+FL WSS               SFANASGFCAFLRA +E
Sbjct: 1   MEPIQSRFLCWSSLWPFFLLLPIHIFLLSFANASGFCAFLRAVIE 45


>gb|PIN03866.1| Heterogeneous nuclear ribonucleoprotein R (RRM superfamily)
           [Handroanthus impetiginosus]
          Length = 539

 Score =  102 bits (254), Expect(2) = 7e-28
 Identities = 57/114 (50%), Positives = 63/114 (55%)
 Frame = -2

Query: 344 CWRCKMPRTRANAAATKSPEPEKPVETEEHVELGADNDTXXXXXXXXXXXXXXXXXXXXX 165
           CW+ KMPR R +AAA KS E EKPVETEE VELG DNDT                     
Sbjct: 48  CWKHKMPRARGSAAAIKSAEAEKPVETEEQVELGGDNDT---EEEEVEYEEVEEEVEEEE 104

Query: 164 XXXXXXXXXXXXXXXEDDAHRHDTQKESDGDDDMENAEGDEELEKKRSELLALP 3
                          +DD HRHD +KE D DDDMEN E +EEL+KK SELLALP
Sbjct: 105 EEEVEEEEEEEEEEEDDDGHRHDARKEPDCDDDMENVEDEEELKKKHSELLALP 158



 Score = 49.7 bits (117), Expect(2) = 7e-28
 Identities = 25/45 (55%), Positives = 27/45 (60%)
 Frame = -3

Query: 487 MEPILSKFLLWSSXXXXXXXXXXXXXXHSFANASGFCAFLRAALE 353
           MEPI S+FL WSS               SFANASGFCAFLRA +E
Sbjct: 1   MEPIQSRFLCWSSLWPFFLLSPIHIFLLSFANASGFCAFLRAVIE 45


>ref|XP_011077857.1| heterogeneous nuclear ribonucleoprotein R-like [Sesamum indicum]
 ref|XP_011077858.1| heterogeneous nuclear ribonucleoprotein R-like [Sesamum indicum]
 ref|XP_020549538.1| heterogeneous nuclear ribonucleoprotein R-like [Sesamum indicum]
 ref|XP_020549539.1| heterogeneous nuclear ribonucleoprotein R-like [Sesamum indicum]
          Length = 487

 Score = 94.7 bits (234), Expect = 4e-19
 Identities = 55/113 (48%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
 Frame = -2

Query: 329 MPRTRANAAATKSPEPEKPVETEEHVELGADNDTXXXXXXXXXXXXXXXXXXXXXXXXXX 150
           MPRT  ++AATKS EPE PVETEE VELGADND                           
Sbjct: 1   MPRTTTSSAATKSTEPENPVETEEQVELGADNDMDETLEEEVEYEEVEEEVEEEEDVEEV 60

Query: 149 XXXXXXXXXXED----DAHRHDTQKESDGDDDMENAEGDEELEKKRSELLALP 3
                     E+    D H HD QKE+DGDDDMEN EG+ +LEKK SELLALP
Sbjct: 61  EEEEDVEEVEEEEEEEDGHGHDAQKETDGDDDMENGEGEGDLEKKHSELLALP 113


>ref|XP_021908589.1| LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein Q
           [Carica papaya]
          Length = 489

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
 Frame = -2

Query: 329 MPRTRANAA----ATKSPEPEKPVETEEHVELGADNDTXXXXXXXXXXXXXXXXXXXXXX 162
           MPRTR+ A     + KS EPEKP+E+EE V+L  DND                       
Sbjct: 1   MPRTRSAARDSEFSEKSTEPEKPMESEERVDLDEDNDPEETLEEEVEYEEVEEEIEEEVE 60

Query: 161 XXXXXXXXXXXXXXEDDAHRHDTQKESDGDDDMENAEGDEELEKKRSELLALP 3
                          +  +R D+QK SDGD++M  A  DE  +KK +ELLALP
Sbjct: 61  EVEEEAESEEDNE--EATNRSDSQKGSDGDEEMHTAATDENEKKKHAELLALP 111


>gb|PHU06432.1| hypothetical protein BC332_22921 [Capsicum chinense]
          Length = 483

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 37/109 (33%), Positives = 51/109 (46%)
 Frame = -2

Query: 329 MPRTRANAAATKSPEPEKPVETEEHVELGADNDTXXXXXXXXXXXXXXXXXXXXXXXXXX 150
           MPRTR++AAATKS EPEKPVETEE V+   DN+                           
Sbjct: 1   MPRTRSSAAATKS-EPEKPVETEEQVDFEGDNEEEEEIEYEEVEEEVEMEEEEEEEVEEE 59

Query: 149 XXXXXXXXXXEDDAHRHDTQKESDGDDDMENAEGDEELEKKRSELLALP 3
                     E++ +  D   + +   D++     E++EKK +ELLALP
Sbjct: 60  VEEEEEEEEEEEEENESDGSGDGNSSKDVKMKVDAEDVEKKHAELLALP 108