BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00008006
         (934 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS86833.1| RNA polymerase II second largest subunit, partial...   565   0.0  
emb|CAD92665.1| RNA polymerase II, partial [Erythranthe guttata]      567   0.0  
emb|CAD91516.1| RNA polymerase II second largest subunit, partia...   565   0.0  
emb|CAD89519.1| RNA polymerase II second largest subunit, partia...   558   0.0  
gb|AAS86826.1| RNA polymerase II second largest subunit, partial...   564   0.0  
emb|CAD88602.1| RNA polymerase II second largest subunit, partia...   562   0.0  
gb|AAS86830.1| RPB140, partial [Liquidambar acalycina]                561   0.0  
gb|AAS86834.1| RNA polymerase II second largest subunit, partial...   560   0.0  
emb|CAD92661.1| RNA polymerase II, partial [Lonicera sp. Oxelman...   552   0.0  
emb|CAD98811.2| RNA polymerase II, second largest subunit, parti...   559   0.0  
gb|AFV74909.1| RNA polymerase II second largest subunit, partial...   558   0.0  
gb|AJS14111.1| RNA polymerase II second largest subunit, partial...   555   0.0  
emb|CAD91515.1| RNA polymerase II second largest subunit, partia...   556   0.0  
emb|CAD92460.1| RNA polymerase II, partial [Escallonia sp. Oxelm...   555   0.0  
gb|EOY28254.1| DNA-directed RNA polymerase family protein isofor...   565   0.0  
emb|CAD89106.1| RNA polymerase II, second largest subunit, parti...   554   0.0  
gb|AAS86829.1| RNA polymerase II second largest subunit, partial...   554   0.0  
gb|AJS14107.1| RNA polymerase II second largest subunit, partial...   554   0.0  
gb|AAW22927.1| RNA polymerase II second largest subunit, partial...   553   0.0  
gb|AJS14126.1| RNA polymerase II second largest subunit, partial...   554   0.0  

>gb|AAS86833.1| RNA polymerase II second largest subunit, partial [Rhododendron
           macrophyllum]
          Length = 549

 Score =  565 bits (1455), Expect = 0.0
 Identities = 277/310 (89%), Positives = 282/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRD
Sbjct: 34  EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRD 93

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEKQRLLIK+KDIQALQQRE+P+DGGWHDLVAKG     
Sbjct: 94  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYI 153

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDLVSARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 213

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 274 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 333

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 334 HGSYDKLDDD 343


>emb|CAD92665.1| RNA polymerase II, partial [Erythranthe guttata]
          Length = 629

 Score =  567 bits (1462), Expect = 0.0
 Identities = 280/310 (90%), Positives = 281/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVST       VDVNTEVGVVRD
Sbjct: 34  EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRD 93

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKG     
Sbjct: 94  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGFIEYI 153

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDLVSARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLVSARLNPGEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 213

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           I+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYR E KKMGTLVKEDFGRPDRANTMGMR
Sbjct: 274 ISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRAEXKKMGTLVKEDFGRPDRANTMGMR 333

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 334 HGSYDKLDDD 343


>emb|CAD91516.1| RNA polymerase II second largest subunit, partial [Garrya
           elliptica]
          Length = 576

 Score =  565 bits (1456), Expect = 0.0
 Identities = 277/310 (89%), Positives = 282/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRD
Sbjct: 29  EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRD 88

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESP+DGGWHDLVAKG     
Sbjct: 89  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPEDGGWHDLVAKGFIEYI 148

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDL+SA+LNP +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 149 DTEEEETTMISMTINDLLSAKLNPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 208

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 209 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 268

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 269 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 328

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 329 HGSYDKLDDD 338


>emb|CAD89519.1| RNA polymerase II second largest subunit, partial [Davidia
           involucrata]
          Length = 396

 Score =  558 bits (1437), Expect = 0.0
 Identities = 273/310 (88%), Positives = 280/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRD
Sbjct: 34  EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 93

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQR++P++ GWHDLVAKG     
Sbjct: 94  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRKTPEEVGWHDLVAKGFIEYI 153

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDLVSARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 213

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 274 IACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 333

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 334 HGSYDKLDDD 343


>gb|AAS86826.1| RNA polymerase II second largest subunit, partial [Antirrhinum
           majus]
          Length = 575

 Score =  564 bits (1453), Expect = 0.0
 Identities = 276/310 (89%), Positives = 283/310 (91%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIPQATKIFVNG WVGIHRNPDMLVST       VDVNTEVGVVRD
Sbjct: 34  EEWGTENFEEISPAVIPQATKIFVNGLWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRD 93

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKD+QALQQRESPDDGGWH+LVAKG     
Sbjct: 94  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDVQALQQRESPDDGGWHELVAKGFIEYI 153

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDL+SA++NP+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLLSAKVNPTEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 213

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMR
Sbjct: 274 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMR 333

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 334 HGSYDKLDDD 343


>emb|CAD88602.1| RNA polymerase II second largest subunit, partial [Alangium
           platanifolium]
          Length = 540

 Score =  562 bits (1448), Expect = 0.0
 Identities = 275/310 (88%), Positives = 281/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRD
Sbjct: 34  EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 93

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQRE+P++GGWHDLVAKG     
Sbjct: 94  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQMLQQRETPEEGGWHDLVAKGFIEYI 153

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDLVSAR+NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLVSARINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 213

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 274 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 333

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 334 HGSYDKLDDD 343


>gb|AAS86830.1| RPB140, partial [Liquidambar acalycina]
          Length = 540

 Score =  561 bits (1445), Expect = 0.0
 Identities = 274/310 (88%), Positives = 282/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRD
Sbjct: 34  EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 93

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVE+QRLLIKKKDIQALQQRE+PDDGGWHDLVAKG     
Sbjct: 94  IRLKELRIYTDYGRCSRPLFIVERQRLLIKKKDIQALQQRETPDDGGWHDLVAKGFIEYV 153

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDLVSARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 213

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+RA+TMGMR
Sbjct: 274 IACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRADTMGMR 333

Query: 903 HGSYDKLDDD 932
           HGSY+KLDDD
Sbjct: 334 HGSYEKLDDD 343


>gb|AAS86834.1| RNA polymerase II second largest subunit, partial [Camellia
           japonica]
          Length = 559

 Score =  560 bits (1444), Expect = 0.0
 Identities = 274/310 (88%), Positives = 281/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRD
Sbjct: 53  EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 112

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ+LQQRE+P+DGGWHDLVAKG     
Sbjct: 113 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQSLQQRETPEDGGWHDLVAKGYIEYI 172

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDL++ARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 173 DTEEEETTMISMTINDLITARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 232

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 233 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 292

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG PDRANTMGMR
Sbjct: 293 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGCPDRANTMGMR 352

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 353 HGSYDKLDDD 362


>emb|CAD92661.1| RNA polymerase II, partial [Lonicera sp. Oxelman 2331]
          Length = 349

 Score =  552 bits (1422), Expect = 0.0
 Identities = 272/310 (87%), Positives = 277/310 (89%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRD
Sbjct: 35  EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRD 94

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ RESP+D GW DLV KG     
Sbjct: 95  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQTRESPEDAGWRDLVEKGFIEYI 154

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDLVSAR NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 155 DTEEEETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 214

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 215 NTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 274

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           I+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 275 ISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 334

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 335 HGSYDKLDDD 344


>emb|CAD98811.2| RNA polymerase II, second largest subunit, partial [Gardenia sp.
           Oxelman 2319]
          Length = 545

 Score =  559 bits (1441), Expect = 0.0
 Identities = 275/310 (88%), Positives = 280/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRD
Sbjct: 33  EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRD 92

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ RESPD+ GWHDLVA+G     
Sbjct: 93  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQARESPDECGWHDLVARGFIEYI 152

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDLV+ARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 153 DTEEEETTMISMTINDLVTARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 212

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 213 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 272

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMR
Sbjct: 273 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMR 332

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 333 HGSYDKLDDD 342


>gb|AFV74909.1| RNA polymerase II second largest subunit, partial [Balanophora
           laxiflora]
          Length = 569

 Score =  558 bits (1438), Expect = 0.0
 Identities = 273/310 (88%), Positives = 280/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIP ATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRD
Sbjct: 28  EEWGTENFEEISPAVIPTATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 87

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEK+RLLIKKKDIQALQQRESPD+GGWHDLVAKG     
Sbjct: 88  IRLKELRIYTDYGRCSRPLFIVEKKRLLIKKKDIQALQQRESPDEGGWHDLVAKGFIEYI 147

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDLVS R+NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 148 DTEEEETTMISMTINDLVSGRINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 207

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQ+RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 208 NTYQSAMGKQAMGIYVTNYQYRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 267

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+TMGMR
Sbjct: 268 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRADTMGMR 327

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 328 HGSYDKLDDD 337


>gb|AJS14111.1| RNA polymerase II second largest subunit, partial [Lepionurus
           sylvestris]
          Length = 490

 Score =  555 bits (1430), Expect = 0.0
 Identities = 272/310 (87%), Positives = 280/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIPQATKIFVNGCWVG+HR+PDMLV T       VDVNTEVGVVRD
Sbjct: 28  EEWGTENFEEISPAVIPQATKIFVNGCWVGVHRDPDMLVRTLRRLRRRVDVNTEVGVVRD 87

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRES ++GGWHDLVAKG     
Sbjct: 88  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESAEEGGWHDLVAKGYIEYI 147

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDLV+ARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 148 DTEEEETTMISMTINDLVTARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 207

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 208 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 267

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMR
Sbjct: 268 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRMDTMGMR 327

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 328 HGSYDKLDDD 337


>emb|CAD91515.1| RNA polymerase II second largest subunit, partial [Hedera helix]
          Length = 541

 Score =  556 bits (1434), Expect = 0.0
 Identities = 272/310 (87%), Positives = 280/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVI QATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRD
Sbjct: 34  EEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 93

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIV+ QRLLI+KKDIQALQQRESP+DGGWHDLVAKG     
Sbjct: 94  IRLKELRIYTDYGRCSRPLFIVKNQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFIEYI 153

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDL+SAR+NP EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 213

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 274 IACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 333

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 334 HGSYDKLDDD 343


>emb|CAD92460.1| RNA polymerase II, partial [Escallonia sp. Oxelman 2340]
          Length = 543

 Score =  555 bits (1431), Expect = 0.0
 Identities = 272/310 (87%), Positives = 278/310 (89%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIP ATKIFVNGCWVGIHR+PDMLV T        DVNTEVGVVRD
Sbjct: 28  EEWGTENFEEISPAVIPPATKIFVNGCWVGIHRDPDMLVRTLRKLRRRXDVNTEVGVVRD 87

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIV KQRLLIKK DIQALQQRE+P+DGGWHDLVAKG     
Sbjct: 88  IRLKELRIYTDYGRCSRPLFIVNKQRLLIKKADIQALQQRETPEDGGWHDLVAKGYIEYI 147

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDLVSARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 148 DTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 207

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 208 NTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 267

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 268 IACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 327

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 328 HGSYDKLDDD 337


>gb|EOY28254.1| DNA-directed RNA polymerase family protein isoform 2 [Theobroma
            cacao]
          Length = 809

 Score =  565 bits (1455), Expect = 0.0
 Identities = 276/310 (89%), Positives = 281/310 (90%)
 Frame = +3

Query: 3    EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
            EEWGTENFEEISPAVIPQATKIFVNGCWVG+HRNPDMLV+T       VDVNTEVGVVRD
Sbjct: 199  EEWGTENFEEISPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRD 258

Query: 183  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
            IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRESP+DGGWHDLVAKG     
Sbjct: 259  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYI 318

Query: 363  XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                          NDLV AR+NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 319  DTEEEETTMISMTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 378

Query: 543  NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
            NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 379  NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 438

Query: 723  IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
            IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 439  IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 498

Query: 903  HGSYDKLDDD 932
            HGSYDKLDDD
Sbjct: 499  HGSYDKLDDD 508


>emb|CAD89106.1| RNA polymerase II, second largest subunit, partial [Tephrosia
           purpurea]
          Length = 550

 Score =  554 bits (1428), Expect = 0.0
 Identities = 271/310 (87%), Positives = 279/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIPQATKIFVNGCW+GIHR+PDMLV T       VDVNTEVGVVRD
Sbjct: 33  EEWGTENFEEISPAVIPQATKIFVNGCWLGIHRDPDMLVKTLRNLRRRVDVNTEVGVVRD 92

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI ALQQRESP++GGWHDLV+KG     
Sbjct: 93  IRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIIALQQRESPEEGGWHDLVSKGFIEYI 152

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDL+ ARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 153 DTEEEETTMISMTINDLIQARLNPGEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 212

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 213 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 272

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDF RPDR+NTMGMR
Sbjct: 273 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFCRPDRSNTMGMR 332

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 333 HGSYDKLDDD 342


>gb|AAS86829.1| RNA polymerase II second largest subunit, partial [Astilbe
           chinensis]
          Length = 540

 Score =  554 bits (1427), Expect = 0.0
 Identities = 272/310 (87%), Positives = 279/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIP+ATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRD
Sbjct: 34  EEWGTENFEEISPAVIPEATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 93

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRE+P+DGGWHDLVAKG     
Sbjct: 94  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPEDGGWHDLVAKGFIEYV 153

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDLVSARLNP EAYS+ YTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLVSARLNPEEAYSEYYTHCEIHPSLILGVCASIIPFPDHNQSPR 213

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TM MR
Sbjct: 274 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRNDTMNMR 333

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 334 HGSYDKLDDD 343


>gb|AJS14107.1| RNA polymerase II second largest subunit, partial [Exocarpos
           cupressiformis]
          Length = 569

 Score =  554 bits (1428), Expect = 0.0
 Identities = 272/310 (87%), Positives = 280/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIPQ+TKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRD
Sbjct: 28  EEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRD 87

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRE+ ++GGWHDLVAKG     
Sbjct: 88  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETAEEGGWHDLVAKGFIEYI 147

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDLVSARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 148 DTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 207

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 208 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 267

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMR
Sbjct: 268 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRMDTMGMR 327

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 328 HGSYDKLDDD 337


>gb|AAW22927.1| RNA polymerase II second largest subunit, partial [Dianthus sp.
           UWG]
          Length = 540

 Score =  553 bits (1425), Expect = 0.0
 Identities = 272/310 (87%), Positives = 279/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEW TENFEEISPAVIPQATKIFVNG WVGIHR+PD+LV T       VDVNTEVGVVRD
Sbjct: 34  EEWSTENFEEISPAVIPQATKIFVNGGWVGIHRDPDLLVKTLRELRRRVDVNTEVGVVRD 93

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI+ALQQRE+P+DGGWHDLVAKG     
Sbjct: 94  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRETPEDGGWHDLVAKGFIEYI 153

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDLVSARLNP E+YS TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLVSARLNPEESYSGTYTHCEIHPSLILGVCASIIPFPDHNQSPR 213

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMR
Sbjct: 274 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMR 333

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 334 HGSYDKLDDD 343


>gb|AJS14126.1| RNA polymerase II second largest subunit, partial [Ptychopetalum
           petiolatum]
          Length = 569

 Score =  554 bits (1427), Expect = 0.0
 Identities = 271/310 (87%), Positives = 280/310 (90%)
 Frame = +3

Query: 3   EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
           EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRD
Sbjct: 28  EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRD 87

Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
           IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRE+ ++GGWHDLVAKG     
Sbjct: 88  IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETAEEGGWHDLVAKGFIEYI 147

Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
                         NDLV+AR+NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 148 DTEEEETTMISMTINDLVTARINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 207

Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
           NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 208 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 267

Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
           IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMR
Sbjct: 268 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRTDTMGMR 327

Query: 903 HGSYDKLDDD 932
           HGSYDKLDDD
Sbjct: 328 HGSYDKLDDD 337