BLASTX nr result
ID: Rehmannia29_contig00006988
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00006988
(4800 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GAU34086.1| hypothetical protein TSUD_255820 [Trifolium subt... 296 0.0
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 588 0.0
ref|XP_021836918.1| uncharacterized protein LOC110776679 [Spinac... 575 0.0
gb|PNY01158.1| ribonuclease H, partial [Trifolium pratense] 579 e-180
gb|PNX94516.1| ribonuclease H [Trifolium pratense] 290 e-178
gb|PNY14982.1| ribonuclease H [Trifolium pratense] 291 e-178
gb|PNY09839.1| ribonuclease H [Trifolium pratense] 290 e-171
gb|PNX94875.1| ribonuclease H, partial [Trifolium pratense] 286 e-168
ref|XP_010667704.1| PREDICTED: uncharacterized protein LOC104884... 411 e-167
dbj|GAU23029.1| hypothetical protein TSUD_336770 [Trifolium subt... 296 e-163
dbj|GAU37771.1| hypothetical protein TSUD_102880 [Trifolium subt... 416 e-161
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 268 e-161
ref|XP_019095662.1| PREDICTED: uncharacterized protein LOC104763... 233 e-161
dbj|GAU39028.1| hypothetical protein TSUD_59840 [Trifolium subte... 508 e-161
gb|PNY15111.1| ribonuclease H [Trifolium pratense] 507 e-160
ref|XP_009140393.1| PREDICTED: uncharacterized protein LOC103864... 258 e-158
ref|XP_019149681.1| PREDICTED: uncharacterized protein LOC109146... 407 e-158
ref|XP_019185987.1| PREDICTED: uncharacterized protein LOC109180... 382 e-158
ref|XP_019172068.1| PREDICTED: uncharacterized protein LOC109167... 385 e-155
ref|XP_020874113.1| uncharacterized protein LOC110226516 [Arabid... 262 e-154
>dbj|GAU34086.1| hypothetical protein TSUD_255820 [Trifolium subterraneum]
Length = 1362
Score = 296 bits (757), Expect(7) = 0.0
Identities = 159/394 (40%), Positives = 229/394 (58%), Gaps = 1/394 (0%)
Frame = +1
Query: 2605 PSRGLRQGEKLSPYLFIFCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLFFADDSIIF 2784
P RGLRQG+ LSPYLFI AE +S+I+KA GG +HGI +CR AP VSHL FADD +F
Sbjct: 629 PGRGLRQGDPLSPYLFIIVAEGLTSLIKKAVDGGEIHGIKICRGAPSVSHLLFADDCFLF 688
Query: 2785 GRASEREIDETKNIISSYERASGQRINLEKSKISFSKGIHEAQQESLARRLGVQLVDKQK 2964
RA+ E + I+ YE+ASGQ INL KS++ FS+ A QE L+ +GV+ V
Sbjct: 689 CRANLSETRKLMEILEVYEQASGQEINLTKSEVFFSRNFSRAAQEDLSNMMGVKHVMGTG 748
Query: 2965 IYLGILTEVGH*KKHIFXXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAIPTYLMSCF 3144
YLG+ + VG KK F +W+SR+LS AG I+IK+V QAIP Y+MS +
Sbjct: 749 AYLGLPSMVGRSKKETFAFIKDKIWKRINSWRSRHLSRAGTEIMIKSVLQAIPAYVMSIY 808
Query: 3145 LVPMQTCQRINSIVSNFWWGHKRDERRIHWSS*QDICKSKLEGILGFGDLHCFNLAMLAK 3324
L+P I +++ FWWG + + I W + + + K EG LGF D FN+AMLAK
Sbjct: 809 LLPDSLIDDIERMINAFWWGGGDNNKGIRWLAWKRMACPKEEGGLGFRDFQLFNMAMLAK 868
Query: 3325 QGWHLVQDERSLLSKVLKAKYYPRVYFLQASIGHNPSYVWKSIVASQKILARGIRWNIGD 3504
QGW+L+ + SL++KV KA+Y+P L + +G+NPS+ W+SI S+K+L G RW+IGD
Sbjct: 869 QGWNLINNPNSLVAKVFKARYFPHSSLLDSKLGNNPSFTWRSIWKSRKVLLHGCRWSIGD 928
Query: 3505 GKEVKVWFDPWIPENPTFKPITQVPSNES-RDLMVDDLVSVEGGCGILISLWKGLIQRML 3681
G +KV +PW+ + P N+ +L + L+ + + +R+
Sbjct: 929 GSNIKVMGEPWLRVED--GGWVESPQNQCVYNLSIQQLMLPNSKHWDVDKIHSLFSERVA 986
Query: 3682 NPYYRSPFVLVEEKIGWFWHHSKNGSYVVKSRYQ 3783
N P + + E+ W+ +G Y V+S Y+
Sbjct: 987 NMILAVPLLHLVERDRVVWNEESDGIYSVRSGYR 1020
Score = 140 bits (354), Expect(7) = 0.0
Identities = 78/234 (33%), Positives = 118/234 (50%), Gaps = 1/234 (0%)
Frame = +1
Query: 673 MSCLSWNCRGLRNPLTVRVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLD 852
M LSWNCRGL P + LK + P +FL ET KMENI ++ +D
Sbjct: 1 MIILSWNCRGLSVPSAIPNLKNIAQSHKPDVLFLSETLSKAQKMENIRVMLKYDSCLAVD 60
Query: 853 CDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMI-NNEDKDWQFLGIYGWPVEGEKYL 1029
D R GGL +MWK + + S + + ++ +NE +W+ YG+P + +
Sbjct: 61 VD----GRSGGLAIMWKESVKCTVLNYSRNFINLVVEDNEKGNWRLTCYYGYPERNRRKM 116
Query: 1030 TWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLGFD 1209
W+L+R L + W +GDFN++L +K G F + D L D+ +
Sbjct: 117 AWDLLRELRDMSTLPWCVIGDFNDLLSQEDKRGLLPHPNWLCSGFRSAVNDCDLTDIHLE 176
Query: 1210 GFIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLIQ 1371
G+ +TW + D I+ERLDR L + EW+ IFPN ++ +L SDH P+L+Q
Sbjct: 177 GYPFTWIKSRGTDHVIEERLDRALASSEWLSIFPNAKLINLLSSHSDHSPILLQ 230
Score = 129 bits (325), Expect(7) = 0.0
Identities = 77/197 (39%), Positives = 105/197 (53%)
Frame = +1
Query: 1780 FFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEGPLGAIN 1959
FFH A R I+K++N + V GQ + V +YF+ +F + E L I+
Sbjct: 355 FFHSSATARAKVKKIEKLRNDEDVVVTGQQNLEEVVRKYFQTLFQPKGG-NQEPVLSLIS 413
Query: 1960 LRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDVLDVILN 2139
R++ E N L P +E+ AL QMHP KSPG D F+Q FW L +V
Sbjct: 414 PRVSAEDNAFLEAPITKEEIRTALFQMHPDKSPGPDGFNPAFFQNFWHLCGDEVFAATKE 473
Query: 2140 ILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKLVLPSLI 2319
L P ++N T I LIPK + + V +F PISLCNV++K+++K +ANRLK L I
Sbjct: 474 WLQRGYFPSTLNETNICLIPKCDSPQSVKDFRPISLCNVLYKMVSKLLANRLKHFLDKCI 533
Query: 2320 HHTQSAFVPRRLITDNA 2370
QSAF+ R I DNA
Sbjct: 534 SEEQSAFIEGRSIIDNA 550
Score = 71.2 bits (173), Expect(7) = 0.0
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 8/171 (4%)
Frame = +1
Query: 4135 DSDSHGLFAVLLWNIWDARNKFLFNDKALSHESFFVTATRCMEEYMQS-------HISSP 4293
D G A LLW IW RN ++N+ LS + + A E+ + H
Sbjct: 1134 DKQVAGKTATLLWCIWQNRNSNVWNNNKLSAQQVGIQAVHLWNEWAMAQGMLDEYHSQDQ 1193
Query: 4294 LLQPRRWKEIWSHPEVSSFKINSDASIMDGEGA-GLGVVIRDHRGKVITTLTKFVDVEYE 4470
L R W P+ K N DAS D GA G G +RDH+G+ I T +
Sbjct: 1194 QLLTPRVAVQWQQPQFGIVKCNVDASFYDIAGATGWGWCVRDHQGRYIIAGTNLLQARLN 1253
Query: 4471 INVAEALACREGILMAKRMQLSQIELETDNLSLYHRLARKQEDLSYFGNLI 4623
I EA+A +E + + S + E+D+ + ++ +QE +S F LI
Sbjct: 1254 ILEGEAMAIKEAMEEMLQRGFSHVIFESDSKIVVDAISSRQEGISDFSLLI 1304
Score = 63.9 bits (154), Expect(7) = 0.0
Identities = 30/70 (42%), Positives = 45/70 (64%)
Frame = +3
Query: 2370 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLDINESFVNLVMKCV 2549
L+A EI H +K G A K+D+ KAYD+VE FL+ +++ + +E++V +M CV
Sbjct: 551 LIAIEIIHTLKRRTRGANGELALKIDISKAYDKVEWSFLKSMLIKMGFSETWVRWMMLCV 610
Query: 2550 SSVFFSTLVN 2579
SSV +S LVN
Sbjct: 611 SSVNYSALVN 620
Score = 60.5 bits (145), Expect(7) = 0.0
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Frame = +2
Query: 1421 KFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWER---SHFGNIG 1591
+FRFE+ WL+++ +++V +G W + G I + Q++ +C +L +W R F
Sbjct: 242 EFRFENNWLKEDDIEEVVNEG---WDVGDG-IEITQRLTHCAEKLQRWGRRKKKKFKEEI 297
Query: 1592 IQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKN 1771
++++ E+L ++ S+ I++E W QRA+ +W+KDGD N
Sbjct: 298 MEIEADMERLRNMNDASSSARFTEVQQQHANIL-----IQEEAFWRQRAKMHWLKDGDLN 352
Query: 1772 TAFF 1783
T FF
Sbjct: 353 TKFF 356
Score = 50.1 bits (118), Expect(7) = 0.0
Identities = 24/67 (35%), Positives = 31/67 (46%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCEWADF 4042
W + PPK + LWR KE LPT++ LR R + C C + E H DCE
Sbjct: 1042 WKVHAPPKAKHLLWRICKECLPTRTRLRNRHVQCPIECPFCLVVPEEEWHMFFDCEGHKD 1101
Query: 4043 FWKTCSL 4063
W + L
Sbjct: 1102 AWSSAGL 1108
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 588 bits (1516), Expect(3) = 0.0
Identities = 363/1055 (34%), Positives = 525/1055 (49%), Gaps = 15/1055 (1%)
Frame = +1
Query: 673 MSCLSWNCRGLRNPLTVRVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLD 852
M+ L WNCRGL NP +VR L+ N P +F+ ET + ++E + F
Sbjct: 1 MNILCWNCRGLGNPWSVRQLRSWSNQFAPDIIFVSETMINKIEVEALKSWLGFSNAF--- 57
Query: 853 CDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDKDWQFLGIYGWPVEGEKYLT 1032
+ S R GGL L WK F L S S HH+ + + +K W+F+G+YGW E EK+LT
Sbjct: 58 -GVASVGRAGGLCLYWKEEVMFSLVSFSQHHICGDVEDGNKKWRFVGVYGWAKEEEKHLT 116
Query: 1033 WELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLGFDG 1212
W L+R L + + L GDFNEIL EK GG + +M+ F + L DLG+ G
Sbjct: 117 WSLLRHLCEDTSLPILLGGDFNEILSAAEKEGGANRVRREMINFRDTLDTLALRDLGYVG 176
Query: 1213 FIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLIQWDRIWSE 1392
YTW G++ I+ERLDR L + W+D++P+ H R SDH ++++ R
Sbjct: 177 TWYTWERGRSPSTCIRERLDRYLCSNSWLDLYPDSVPEHTIRYKSDHSAIVLRSQRAGRP 236
Query: 1393 QGPHXXXXXXXXXXXDVASRRIVSKNGATRMRWMGDLYGINWLKAKN**LWG*AAQMGTI 1572
+G D +V ++ W ++ + G A MG
Sbjct: 237 RGKTRRLHFETSWLLDDECEAVVRES---------------WENSEGEVMTGRVASMGQC 281
Query: 1573 PFWEYWHPIKEV*RKAL*TGSTLSHAHAYSEGEATIRR------------GTSRAPYQTR 1716
K + ++ LS A E+ + A + R
Sbjct: 282 LVRWSTKKFKNLSKQIETAEKALSVAQNNPISESACQECVLLEKKLDELHAKHEAYWYLR 341
Query: 1717 TNVASKGSNKLD*RRGQKYGFFFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEY 1896
+ VA + G K +FH A+ RK RN +K + + G W E + +F Y
Sbjct: 342 SRVAEV-------KDGDKNTKYFHHKASQRKKRNFVKGLFDGLGTWREEADHIENIFTSY 394
Query: 1897 FKMIFSAE--TQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDS 2070
F IF++ + L +E + I +T+E N L PF DE++ AL QMHP K+PG D
Sbjct: 395 FSSIFTSSNPSDLSLEAVMSVIEPVVTEEHNLKLLEPFSKDEILAALQQMHPCKAPGPDG 454
Query: 2071 MPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLC 2250
M +FYQ+FW ++ DV I NIL+ H SP +N+T I LIPK KN F PI+LC
Sbjct: 455 MHVIFYQRFWHIVGDDVTSFISNILHGHSSPSCVNNTNIALIPKVKNPTKAAEFRPIALC 514
Query: 2251 NVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDNASWLLKFFIV*RIIKLGNVGL 2430
NV++K+++K I RLK LP +I QSAFVP RLITDNA ++ F + G
Sbjct: 515 NVLYKLMSKAIVMRLKSFLPEIISENQSAFVPGRLITDNALIAMEVFHSMKNRNRSRKGT 574
Query: 2431 SLLNWIC*KPMIGLNVPFYVVSCFHXXXXXXXXXXXXXXXXXXXXXXXXXGQPGVSFSPS 2610
+ K + F G S P+
Sbjct: 575 IAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMEFVSSVTYSFIINGSVCGSVVPA 634
Query: 2611 RGLRQGEKLSPYLFIFCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLFFADDSIIFGR 2790
RGLRQG+ LSPYLFI A+ FS MI++ +LHG R PE+SHLFFADDS++F R
Sbjct: 635 RGLRQGDPLSPYLFIMVADAFSKMIQRKVQDKQLHGAKASRSGPEISHLFFADDSLLFTR 694
Query: 2791 ASEREIDETKNIISSYERASGQRINLEKSKISFSKGIHEAQQESLARRLGVQLVDKQKIY 2970
A+ +E +I++ YE ASGQ+IN EKS++S+S+G+ +Q++ L L ++ VD+ + Y
Sbjct: 695 ANRQECTIIVDILNQYELASGQKINYEKSEVSYSRGVSVSQKDELTNILNMRQVDRHEKY 754
Query: 2971 LGILTEVGH*KKHIFXXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAIPTYLMSCFLV 3150
LGI + G KK IF WK + LS AGK +L+K+V QAIPTYLM +
Sbjct: 755 LGIPSISGRSKKAIFDSLIDRIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKF 814
Query: 3151 PMQTCQRINSIVSNFWWGHKRDERRIHWSS*QDICKSKLEGILGFGDLHCFNLAMLAKQG 3330
P+ Q+I S ++ FWWG +R+IHW + +C K G +GF DL FN A+L +Q
Sbjct: 815 PVFIIQKIQSAMARFWWGSSDTQRKIHWKNWDSMCNLKCFGGMGFKDLTIFNDALLGRQA 874
Query: 3331 WHLVQDERSLLSKVLKAKYYPRVYFLQASIGHNPSYVWKSIVASQKILARGIRWNIGDGK 3510
W L ++ +SLL +V+KAKY+P FL A +GH+ SY W SI +S+ +L G+ W +G+G
Sbjct: 875 WRLTREPQSLLGRVMKAKYFPNCDFLNAPLGHSSSYSWSSIWSSKALLKEGVIWRVGNGS 934
Query: 3511 EVKVWFDPWI-PENPTFKPITQVPSNESRDLMVDDLVSVEGGCGILISLWKGLIQRMLNP 3687
++ +W DPW+ E F +T P R V +L+ + L L +R L
Sbjct: 935 QINMWSDPWVLDEGGRF--LTSTPHASIR--WVSELIDFDRMEWKTSLLESFLNERDLRC 990
Query: 3688 YYRSPFVLVEEKIGWFWHHSKNGSYVVKSRYQVAR 3792
SP W +K+ +Y VK+ Y + +
Sbjct: 991 ILASPLSATPVPDELTWAFTKDATYSVKTAYMIGK 1025
Score = 61.6 bits (148), Expect(3) = 0.0
Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 5/154 (3%)
Frame = +1
Query: 4159 AVLLWNIWDARNKFLFNDKALSHESFFVTATRCMEEYMQSH---ISSPLLQPRRW--KEI 4323
A L W IW RN +FN+K +R +EE SH I PL+ PRR
Sbjct: 1137 AYLAWCIWGERNAKIFNNKTTPSSVLMQRVSRLVEEN-GSHARRIYQPLV-PRRTGSPRQ 1194
Query: 4324 WSHPEVSSFKINSDASIMDGEGAGLGVVIRDHRGKVITTLTKFVDVEYEINVAEALACRE 4503
W P S K+N DAS+ GL V+ R G V+ + V + +AEA A
Sbjct: 1195 WIAPPADSIKLNVDASLAVDGWVGLSVIARRSDGGVLFAAVRRVRAYWAPEIAEAKAVEL 1254
Query: 4504 GILMAKRMQLSQIELETDNLSLYHRLARKQEDLS 4605
+ + +R L ++ LE+D + +RL++ LS
Sbjct: 1255 AVKLGRRYGLQRVILESDCQVVINRLSKNAIFLS 1288
Score = 46.6 bits (109), Expect(3) = 0.0
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICR-RCGLSEETIEHAIRDCEWAD 4039
W+L + PKV+ FLWR LP +S L+ R + D +C CG ET HAI DC
Sbjct: 1040 WSLDVSPKVRHFLWRLCTTSLPVRSLLKHRHLTDDDLCPWGCG-EIETQRHAIFDCPKMR 1098
Query: 4040 FFW 4048
W
Sbjct: 1099 DLW 1101
>ref|XP_021836918.1| uncharacterized protein LOC110776679 [Spinacia oleracea]
Length = 1362
Score = 575 bits (1481), Expect(3) = 0.0
Identities = 364/1085 (33%), Positives = 545/1085 (50%), Gaps = 22/1085 (2%)
Frame = +1
Query: 673 MSCLSWNCRGLRNPLTVRVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDF-EGMHVL 849
M LSWNC+GL NP TV+ L+ + P VFLMET + + +E + F EG+
Sbjct: 1 MKILSWNCQGLGNPWTVKSLQDWCWRERPNVVFLMETMIDSKSLERVRNICGFSEGI--- 57
Query: 850 DCDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDKD--WQFLGIYGWPVEGEK 1023
C L+S GG+ W+ + + S S HH I ++D W+ +G+YGWP + K
Sbjct: 58 -C-LSSAGNSGGIGFWWRDI-NVSTSSFSSHHFSADICDQDNVAIWRAVGVYGWPEQENK 114
Query: 1024 YLTWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLG 1203
+ TW LM + + L GDFNEIL + EK GG ++ M F + L DLG
Sbjct: 115 HKTWSLMANITASSELPCLFFGDFNEILSSIEKEGGVVREEKWMDAFRGAVDVCGLRDLG 174
Query: 1204 FDGFIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLI----- 1368
+ G +TW G+ + I+ERLDR L + EW ++FP++ V H +SDH P+L+
Sbjct: 175 YKGSCFTWKRGKTPETFIRERLDRFLADTEWCNLFPHFSVRHFPIYSSDHAPILLDASNY 234
Query: 1369 ----------QWDRIW--SEQGPHXXXXXXXXXXXDVASRRIVSKNGATRMRWMGDLYGI 1512
+++ +W SE+ + A +R+ S+ W D +G
Sbjct: 235 YERGGNVKAFKFEALWLSSEECGKVVADAWASCVGEQADQRL-SRCAERLTSWAADYFGS 293
Query: 1513 NWLKAKN**LWG*AAQMGTIPFWEYWHPIKEV*RKAL*TGSTLSHAHAYSEGEATIRRGT 1692
+ K + + HP + + L H E R
Sbjct: 294 IKKRKK--------VVEEQLKIAQARHPDATMFETCSLLSTELDELHRLEESYWHAR--- 342
Query: 1693 SRAPYQTRTNVASKGSNKLD*RRGQKYGFFFHKIANGRKTRNSIKKIKNSKGAWVEGQ*G 1872
+RA N+L R G + +FH A+ R+ N IK + + W +
Sbjct: 343 ARA-------------NEL--RDGDRNTAYFHHKASHRRRVNGIKGLLDDNDKWCSSKDE 387
Query: 1873 VTRVFEEYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTK 2052
+ + YF ++F++ET + + + I +T +MN++ + +E+ +AL QMHP K
Sbjct: 388 LEAIVSNYFSVLFASETPVGFDDAMAGITRVVTCDMNDIFDKEPTAEEIKEALFQMHPNK 447
Query: 2053 SPGSDSMPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF 2232
+PG D M ALF+QKFW ++ DV+ + N N ++N T +VLIPK +N + +T F
Sbjct: 448 APGPDGMHALFFQKFWHILGNDVVVFVKNWWNGSIDLNAVNKTCVVLIPKCENPKRITEF 507
Query: 2233 *PISLCNVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDNASWLLKFFIV*RIIK 2412
PIS CNV++KII+KT+AN+LK L ++I QSAFVP+RLITDNA + F +
Sbjct: 508 RPISCCNVLYKIISKTMANKLKPFLGNIISVNQSAFVPKRLITDNALVAFEIFHSMKRKA 567
Query: 2413 LGNVGLSLLNWIC*KPMIGLNVPFYVVSCFHXXXXXXXXXXXXXXXXXXXXXXXXXGQPG 2592
G G L K + F + G+
Sbjct: 568 GGREGSVALKLDMKKAYDRVEWSFLEQVMYKMGFGDNWVRRIMDCLSSVSFSFKINGRIS 627
Query: 2593 VSFSPSRGLRQGEKLSPYLFIFCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLFFADD 2772
S PSRGLRQG+ +SPYLF+ A+ FS+++ KA R+HGI +C AP+VSHLFFADD
Sbjct: 628 GSVIPSRGLRQGDPISPYLFLIVADAFSTLLSKAARENRIHGIKICNGAPKVSHLFFADD 687
Query: 2773 SIIFGRASEREIDETKNIISSYERASGQRINLEKSKISFSKGIHEAQQESLARRLGVQLV 2952
SI+F +AS E +IIS YERASGQ +NL+K+ + FSK ++ +++ + LGV+ V
Sbjct: 688 SILFAKASVGECSVIADIISKYERASGQSVNLDKTDVVFSKSVNVIRRQEIVTTLGVKEV 747
Query: 2953 DKQKIYLGILTEVGH*KKHIFXXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAIPTYL 3132
+K + YLG+ T +G KK +F WK + LS GK +LIKAVAQAIPTY+
Sbjct: 748 EKHEKYLGLPTIIGKSKKMVFASLKERIWKKLQGWKEKLLSRPGKEVLIKAVAQAIPTYM 807
Query: 3133 MSCFLVPMQTCQRINSIVSNFWWGHKRDERRIHWSS*QDICKSKLEGILGFGDLHCFNLA 3312
MS F +P I+++ + FWWG R++HW S + +CK K G +GF DL FN A
Sbjct: 808 MSIFKIPDGLLDEIHALCARFWWGSDGTNRKMHWHSWETMCKPKAMGGMGFRDLKVFNQA 867
Query: 3313 MLAKQGWHLVQDERSLLSKVLKAKYYPRVYFLQASIGHNPSYVWKSIVASQKILARGIRW 3492
+LAKQ W L + +++ +LKA+Y+ L G +PSY W+S+ ++ +L G+RW
Sbjct: 868 LLAKQMWRLHNNPGTIIHSLLKARYFKNNEVLDTRRGFDPSYSWRSMWGAKSLLLDGVRW 927
Query: 3493 NIGDGKEVKVWFDPWIP-ENPTFKP-ITQVPSNESRDLMVDDLVSVEGGCGILISLWKGL 3666
+G+G+ + VW D W+P N T P + VP DL V DL+ G I + +
Sbjct: 928 RVGNGQSILVWRDNWLPGNNATLSPRSSHVP---DPDLRVSDLLDPVCGEWDSILVQQLF 984
Query: 3667 IQRMLNPYYRSPFVLVEEKIGWFWHHSKNGSYVVKSRYQVARDMRDEEVVAPSTSQSNME 3846
+ ++ P FW SK+G Y V+S Y + R M V + N +
Sbjct: 985 EDEVCEQIFKLPLSCSLPSDSLFWWPSKDGEYTVRSGYWLGR-MGRLRVELDGMDEDNKD 1043
Query: 3847 LWRWI 3861
WR +
Sbjct: 1044 TWRTV 1048
Score = 67.8 bits (164), Expect(3) = 0.0
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 4/165 (2%)
Frame = +1
Query: 4123 RKKVDSDSHGLFAVLLWNIWDARNKFLFNDKALSHESFFVTATRCMEEYMQSHISSPLLQ 4302
R KV + A + W IW RNK +++++ + + + +EE+ ++I +
Sbjct: 1135 RSKVSREELKRIATIAWAIWYCRNKRVYDNEQTNCPMVAASFVKMVEEH-GTYIKNISSY 1193
Query: 4303 PRRWKEI----WSHPEVSSFKINSDASIMDGEGAGLGVVIRDHRGKVITTLTKFVDVEYE 4470
R I WS P KIN DA + AGLGVV+RD GK++ T TK V+
Sbjct: 1194 RRPTMPISAMTWSCPPRGMVKINVDAHVT-ATYAGLGVVVRDEVGKLMLTATKRVNGGLM 1252
Query: 4471 INVAEALACREGILMAKRMQLSQIELETDNLSLYHRLARKQEDLS 4605
+ AEA+A R G ++A+R + + LE D L++ + + LS
Sbjct: 1253 PDAAEAMAARYGAVIARRFGYTNVWLEGDALAVAKAVDANTKGLS 1297
Score = 47.4 bits (111), Expect(3) = 0.0
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCEWADF 4042
W++ PPK+ FLWR + + K L +R I + +C CG+ E+I H + +C A
Sbjct: 1049 WSIGGPPKLGHFLWRACRGSMAVKDVLFRRHIAANDMCGCCGVETESIIHVLFNCTVAKE 1108
Query: 4043 FWK 4051
W+
Sbjct: 1109 TWR 1111
>gb|PNY01158.1| ribonuclease H, partial [Trifolium pratense]
Length = 1068
Score = 579 bits (1492), Expect = e-180
Identities = 352/1035 (34%), Positives = 535/1035 (51%), Gaps = 28/1035 (2%)
Frame = +1
Query: 853 CDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNED--KDWQFLGIYGWPVEGEKY 1026
C R GG+ L W + + S SL+H+ I E+ + W G+YG+P E K
Sbjct: 18 CSGEGRERAGGVALFWNDQINISILSFSLNHIHGRIEGENGXEPWFVTGVYGFPDERRKK 77
Query: 1027 LTWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLGF 1206
TW L+ + A+ + WLC+GD N+ L EK GG + +++ V L+DLGF
Sbjct: 78 DTWALINSFADLATNLWLCLGDLNDTLLAAEKKGGIPRTFDQLTVGRDVTLACGLHDLGF 137
Query: 1207 DGFIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPV-LIQWDRI 1383
+G+ +TW+NG+ G N+Q RLDR L + R ++H P+ ++ R
Sbjct: 138 NGYPFTWSNGREGVENVQCRLDRALAS---------------ERFITEHSPIKVMHLPRY 182
Query: 1384 WSEQGPHXXXXXXXXXXXDVASRRIVSKNGATRMR--WMGD-----LYGINWLKAKN**L 1542
S+ DV S K R W D L W ++
Sbjct: 183 GSDHSA-----ISITTLEDVPSSSRKKKLHVFRFEESWYKDNRCEQLVLAAWSNSRG--- 234
Query: 1543 WG*AAQMGTIPFWE---YWHPIKEV*RKAL*TGSTLSHAHAYSEGEATIRRGTSRAPYQT 1713
++++ +I + H EV ++ + T L +SE +R+ R +T
Sbjct: 235 -NCSSKIDSIKSLDNDFVDHRTSEVRKEIVSTEKLLQDGSLWSESHDDLRK--YRELERT 291
Query: 1714 RTNVASKGSNKLD*RR-------GQKYGFFFHKIANGRKTRNSIKKIKNSKGAWVEGQ*G 1872
N+ K R G K FFH A+ RK N IKK+K+ G W GQ
Sbjct: 292 HANLLQKEETLWRQRSRATWLKDGDKNTKFFHGKASQRKKTNCIKKLKDDDGIWWSGQDN 351
Query: 1873 VTRVFEEYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTK 2052
V +VF YF +FS+ +++E AI R+ + E ++ F +E+ + QMHP K
Sbjct: 352 VEKVFLHYFVDLFSSSNPVDVEQTCEAIQKRLLPDHVEWCNQRFTAEEIKATVDQMHPLK 411
Query: 2053 SPGSDSMPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF 2232
+PG D +PALF+Q++W ++ D++D+ L ILN+ +SP IN TFI LIPK KN F
Sbjct: 412 APGPDGLPALFFQEYWHIVGNDIIDLSLGILNEGKSPEVINKTFIALIPKCKNPSAPKQF 471
Query: 2233 *PISLCNVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDNASWLLKFFIV*RIIK 2412
PISLCNV KI+TKTIANR+K +LP ++ QSAFV RLITDNA ++ F +
Sbjct: 472 RPISLCNVTMKIVTKTIANRIKSILPDVVDEEQSAFVKGRLITDNALIAMECFHWLKKKV 531
Query: 2413 LGNVGLSLLNWIC*KPMIGLNVPFYVVSCFHXXXXXXXXXXXXXXXXXXXXXXXXXGQPG 2592
G G L K + F + GQP
Sbjct: 532 KGKRGTMALKLDMAKAYDRMEWAFIRGVLHNMGFPERFLQLIMSCISTVSYQILINGQPS 591
Query: 2593 VSFSPSRGLRQGEKLSPYLFIFCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLFFADD 2772
SFSP+RG+RQG+ LSPY+FI CA V S ++ K +HGI V R AP+++HL FADD
Sbjct: 592 SSFSPNRGIRQGDPLSPYIFILCANVLSGLLHKEAQSQAIHGIQVARNAPKITHLLFADD 651
Query: 2773 SIIFGRASEREIDETKNIISSYERASGQRINLEKSKISFSKGIHEAQQESLARRLGVQLV 2952
S++F RA++ E + +++ Y+ ASGQ ++ EKS++SFS+ + + ++ + ++ V+ V
Sbjct: 652 SLLFARANQNEANTIIQVLNKYQLASGQMVSYEKSEVSFSRNVPDIEKNIICNKIEVKAV 711
Query: 2953 DKQKIYLGILTEVGH*KKHIFXXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAIPTYL 3132
YLG+ G KK +F WK + LS AGK LIKAVAQAIP+Y+
Sbjct: 712 TSHSRYLGLPVIFGRSKKEVFAFVQDRIWKKVKGWKEKCLSKAGKETLIKAVAQAIPSYI 771
Query: 3133 MSCFLVPMQTCQRINSIVSNFWWGHKRDERRIHWSS*QDICKSKLEGILGFGDLHCFNLA 3312
MSC+ +P +C I S++S FWWG + +IHW S + ++K +G LGF FN A
Sbjct: 772 MSCYKIPEGSCANIESMLSKFWWGSSDQKNKIHWMSWDRLGRAKNKGGLGFRGFSDFNKA 831
Query: 3313 MLAKQGWHLVQDERSLLSKVLKAKYYPRVYFLQASIGHNPSYVWKSIVASQKILARGIRW 3492
+L KQ W L+ +E SLLS+V K+KY+PR FL++ G+ PSY W+S+ ++ ++ G+RW
Sbjct: 832 LLGKQCWRLMSNEDSLLSRVFKSKYFPRSCFLKSKCGYQPSYAWRSLFNAKSVIDLGLRW 891
Query: 3493 NIGDGKEVKVWFDPWIPENPTFKPITQVPSNESRDLMVDDLVSVEGGCGILISLWK-GLI 3669
IG+G++VK+W DPW+PE +FK + V N D +V +L+ V+ + WK L+
Sbjct: 892 TIGNGQQVKIWKDPWLPELSSFKVWSPV-CNLDEDAVVAELIDVD------LKKWKRELV 944
Query: 3670 QRMLNPYYRSPFV-------LVEEKIGWFWHHSKNGSYVVKSRYQVARDMRDEEVVAPST 3828
N + + + L ++K W W +NG+Y V+S Y + ++ ++ PST
Sbjct: 945 MNSFNEFEANQILNIPLSWRLPDDKKVWSW--ERNGNYSVRSAYHLLKEETLRDIPEPST 1002
Query: 3829 SQSNMELWRWILELE 3873
+ N +W+ I +++
Sbjct: 1003 A-GNTGIWKSIWKVQ 1016
Score = 63.9 bits (154), Expect = 3e-06
Identities = 28/64 (43%), Positives = 38/64 (59%)
Frame = +2
Query: 3839 IWSFGDGFWNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAI 4018
IW W ++ P +V++FLWR K ILPT+ L ++G+ LDPIC C EET EH
Sbjct: 1008 IWK---SIWKVQAPQRVKNFLWRVVKRILPTRCRLEQKGVALDPICPLCHDGEETQEHLF 1064
Query: 4019 RDCE 4030
C+
Sbjct: 1065 MHCQ 1068
>gb|PNX94516.1| ribonuclease H [Trifolium pratense]
Length = 1358
Score = 290 bits (743), Expect(7) = e-178
Identities = 157/394 (39%), Positives = 225/394 (57%), Gaps = 1/394 (0%)
Frame = +1
Query: 2605 PSRGLRQGEKLSPYLFIFCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLFFADDSIIF 2784
P RGLRQG+ LSPYLFI AE +S+I+KA G +HG+ +CR AP VSHL FADD +F
Sbjct: 629 PGRGLRQGDPLSPYLFILVAEGLTSLIKKAVAQGDIHGVKICRGAPMVSHLLFADDCFLF 688
Query: 2785 GRASEREIDETKNIISSYERASGQRINLEKSKISFSKGIHEAQQESLARRLGVQLVDKQK 2964
RA+ E + +I+ YE ASGQ INL KS++ FS+ I QE L+R +GV+ V
Sbjct: 689 CRANLSESKKLMDILKIYEDASGQEINLSKSEVFFSRNISREAQEDLSRLMGVRHVLGTG 748
Query: 2965 IYLGILTEVGH*KKHIFXXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAIPTYLMSCF 3144
YLG+ + VG KK+ F +W+SR LS AGK ++IK++ QAIP+Y+MS +
Sbjct: 749 TYLGLPSLVGRSKKNTFAFIKDRIWKKINSWRSRPLSKAGKEVMIKSILQAIPSYVMSIY 808
Query: 3145 LVPMQTCQRINSIVSNFWWGHKRDERRIHWSS*QDICKSKLEGILGFGDLHCFNLAMLAK 3324
L+P + + +++ FWWG + R I W S + SK G LGF D FNLAM+AK
Sbjct: 809 LLPDTLIKELERMINAFWWGGSNNSRGIKWLSWDRMVSSKDRGGLGFRDFQVFNLAMVAK 868
Query: 3325 QGWHLVQDERSLLSKVLKAKYYPRVYFLQASIGHNPSYVWKSIVASQKILARGIRWNIGD 3504
QGW+ + +L+S+ KA+Y+P+ A +G+NPSYVW+SI S+++L G RW IGD
Sbjct: 869 QGWNFITKPHTLVSRTFKARYFPKCSLFDAVLGNNPSYVWRSIWKSRQVLLHGCRWVIGD 928
Query: 3505 GKEVKVWFDPWIPENPTFKPITQVPSNES-RDLMVDDLVSVEGGCGILISLWKGLIQRML 3681
G ++KV DPW+ + P N + +L V L+ + + +
Sbjct: 929 GSKIKVMQDPWL--RSSNNSWVSAPQNYTVHNLKVQQLLLPNQKQWDERKIMSLFPEHTV 986
Query: 3682 NPYYRSPFVLVEEKIGWFWHHSKNGSYVVKSRYQ 3783
P + E+ W NG+Y V+S Y+
Sbjct: 987 KDILAIPLLATTEEDMIIWKEESNGTYSVRSGYK 1020
Score = 139 bits (349), Expect(7) = e-178
Identities = 72/234 (30%), Positives = 122/234 (52%), Gaps = 1/234 (0%)
Frame = +1
Query: 673 MSCLSWNCRGLRNPLTVRVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLD 852
M LSWNCRGL +P + L+ + P +FL ET + KME++ ++ +D
Sbjct: 1 MIVLSWNCRGLSHPSAIPNLRNIARGHRPDVLFLSETLSKSRKMESLRVMLKYDSCLSID 60
Query: 853 CDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDK-DWQFLGIYGWPVEGEKYL 1029
+ R GG+ +MWK ++ + S + + ++ +E+ +W+ YG+P + L
Sbjct: 61 VE----GRSGGIAVMWKDTVKCRIMNYSRNFINIIVEDEEVGEWRLTCYYGYPERSRRRL 116
Query: 1030 TWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLGFD 1209
WE+++ L + + W +GDFN++L +K G F + D L D+ +
Sbjct: 117 AWEMLKDLRDMSHLPWCIIGDFNDLLSQEDKRGVHPHPNWLCSGFRNAVNDCNLTDIHLE 176
Query: 1210 GFIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLIQ 1371
G+ YTW + D +I+ERLDR L N W+ +FPN ++ +L SDH P+L+Q
Sbjct: 177 GYPYTWVKSRGTDHSIEERLDRALANSLWLSLFPNAKLINLLSSHSDHNPILLQ 230
Score = 127 bits (319), Expect(7) = e-178
Identities = 73/197 (37%), Positives = 104/197 (52%)
Frame = +1
Query: 1780 FFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEGPLGAIN 1959
FFH A R I K+ + + V + V YF +F ++ + E L I+
Sbjct: 355 FFHASATARTKIKKIDKLTSDENVIVTSHQDLCEVARNYFDQLFKSKLS-DQEPVLSLIS 413
Query: 1960 LRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDVLDVILN 2139
R++ E NE L P +E+ AL QMHP KSPG D F+Q FW + D+ +
Sbjct: 414 PRISTEDNERLVAPISKEELRSALFQMHPDKSPGPDGFNPAFFQHFWDMCGEDIFQEVKG 473
Query: 2140 ILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKLVLPSLI 2319
L+ P S+N T I LIPK + + ++ PISLCNV++K+++K +ANRLK L +
Sbjct: 474 WLDRGYFPTSMNETNICLIPKCERPNNMKDYRPISLCNVLYKMVSKVLANRLKHCLEKCV 533
Query: 2320 HHTQSAFVPRRLITDNA 2370
QSAF+ R ITDNA
Sbjct: 534 SEEQSAFIEGRYITDNA 550
Score = 65.1 bits (157), Expect(7) = e-178
Identities = 31/70 (44%), Positives = 46/70 (65%)
Frame = +3
Query: 2370 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLDINESFVNLVMKCV 2549
L+A EI H +K +G A K+D+ KAYDRV+ FL+G++L + +E +V +M CV
Sbjct: 551 LIAIEIIHYLKRKSRGLKGELALKIDISKAYDRVDWGFLKGMLLRMGFSEKWVQWMMLCV 610
Query: 2550 SSVFFSTLVN 2579
SSV +S L+N
Sbjct: 611 SSVNYSVLMN 620
Score = 48.9 bits (115), Expect(7) = e-178
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCEWADF 4042
W +K P K + LWR K+ LPT+ LR ++ C C ++E H +CE +
Sbjct: 1042 WKIKAPQKAKHLLWRICKDCLPTRVRLRNHFVNCPLDCPFCSHNDEDERHLFFECEGSKE 1101
Query: 4043 FWKTCSL------RLQFSDN 4084
W L RLQ DN
Sbjct: 1102 AWIVMGLDSVINQRLQHFDN 1121
Score = 47.4 bits (111), Expect(7) = e-178
Identities = 30/120 (25%), Positives = 55/120 (45%)
Frame = +2
Query: 1424 FRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGIQLK 1603
F+FE+ WLQ+E ++V G W + +K+ C L KW + ++
Sbjct: 243 FKFENCWLQEEDLAEVVEAG---WREERDA-EVVEKLACCAESLQKWGKRKKVKFQEEVA 298
Query: 1604 KSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKNTAFF 1783
+ E ++ +L +++ +++E W QRA+ +W+K+GD NT FF
Sbjct: 299 EYEAEMGRLRGEYDAYSMTRFNELRHQHAKVL--VQEESFWKQRAKMHWLKEGDLNTKFF 356
Score = 47.0 bits (110), Expect(7) = e-178
Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 4/162 (2%)
Frame = +1
Query: 4150 GLFAVLLWNIWDARNKFLFNDKALSHESFFVTATRCMEEYMQSHISSPLLQPRRWKE--- 4320
G A+LLW +W RN +++ + S A EE+ L Q +
Sbjct: 1139 GRMAILLWTLWKNRNNWVWKELRASARQSGFEAQHLWEEWHSVTTLGTLEQQQEHDHSLI 1198
Query: 4321 IWSHPEVSSFKINSDASIMDG-EGAGLGVVIRDHRGKVITTLTKFVDVEYEINVAEALAC 4497
W P K N DAS + G G +R G+ I + + + I EA+A
Sbjct: 1199 TWQPPPQGMLKCNVDASFHSNIDACGWGWCLRGCNGQYIVAGSNVLYKKLNIMEGEAMAV 1258
Query: 4498 REGILMAKRMQLSQIELETDNLSLYHRLARKQEDLSYFGNLI 4623
+E I + +Q+ E+D+ + + + +S F +I
Sbjct: 1259 KEAICETIQRGFTQVIFESDSKIVVDAILSRNVGVSEFWCII 1300
>gb|PNY14982.1| ribonuclease H [Trifolium pratense]
Length = 1316
Score = 291 bits (745), Expect(7) = e-178
Identities = 158/406 (38%), Positives = 227/406 (55%), Gaps = 4/406 (0%)
Frame = +1
Query: 2605 PSRGLRQGEKLSPYLFIFCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLFFADDSIIF 2784
P RGLRQG+ LSPYLFI E +S+I+KA G LHG+ +CR AP VSHL FADD IF
Sbjct: 586 PGRGLRQGDPLSPYLFIMVTEGLTSLIKKAVASGDLHGVKICRGAPMVSHLLFADDCFIF 645
Query: 2785 GRASEREIDETKNIISSYERASGQRINLEKSKISFSKGIHEAQQESLARRLGVQLVDKQK 2964
R++ E + I+ YE ASGQ INL KS++ FS+ I A QE L+ +GV+ V
Sbjct: 646 CRSNLSETRKIMEILKIYEDASGQEINLSKSEVFFSRNISPAAQEDLSNLMGVRHVLGTG 705
Query: 2965 IYLGILTEVGH*KKHIFXXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAIPTYLMSCF 3144
YLG+ + VG KK F +W+SR+LS AGK ++IK+V QAIP+Y+MS +
Sbjct: 706 TYLGMPSMVGRSKKATFAYIKDRIWRKINSWRSRHLSKAGKEVMIKSVLQAIPSYVMSIY 765
Query: 3145 LVPMQTCQRINSIVSNFWWGHKRDERRIHWSS*QDICKSKLEGILGFGDLHCFNLAMLAK 3324
++P T I ++++FWWG + + I W S + + +K EG LGF D FN+AM+AK
Sbjct: 766 IIPDTTMNEIERMLNSFWWGGGSNNKGIRWLSWERLACAKGEGGLGFRDFKAFNMAMVAK 825
Query: 3325 QGWHLVQDERSLLSKVLKAKYYPRVYFLQASIGHNPSYVWKSIVASQKILARGIRWNIGD 3504
QGW ++ +L++K+ KA+Y+P ++A++G NPSYVW S+ S +L G RWNIGD
Sbjct: 826 QGWKIMARPETLVAKIFKARYFPHSSLIEANLGSNPSYVWSSLWKSCNVLRLGCRWNIGD 885
Query: 3505 GKEVKVWFDPWIPENPTFKPITQVPSNE----SRDLMVDDLVSVEGGCGILISLWKGLIQ 3672
G +KV D W+ + P +DLM+D + ++ +
Sbjct: 886 GSNIKVMDDSWLRGKERGRVSAPQPEGVYNLCVKDLMLDGVKQWN-----MVRISNLFTH 940
Query: 3673 RMLNPYYRSPFVLVEEKIGWFWHHSKNGSYVVKSRYQVARDMRDEE 3810
P + ++ W +NG Y VKS Y++ EE
Sbjct: 941 DAATDILSIPLLREVKEDKLVWQEEQNGEYTVKSGYRLLMQKIKEE 986
Score = 132 bits (331), Expect(7) = e-178
Identities = 79/197 (40%), Positives = 108/197 (54%)
Frame = +1
Query: 1780 FFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEGPLGAIN 1959
FFH R I+K+ N + V Q + V +YF+ +F + + E L I+
Sbjct: 312 FFHMSTTARAKVKKIEKLMNDENETVTDQQNLGDVVRKYFQELFKPKGGTQ-EPVLSLIS 370
Query: 1960 LRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDVLDVILN 2139
R+T E N +L P +E+ AL QMHP KSPG D F+Q+FW L DV +
Sbjct: 371 PRITTEDNVMLEAPITKEEIRTALFQMHPDKSPGPDGFNPAFFQQFWHLCGDDVFTATKD 430
Query: 2140 ILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKLVLPSLI 2319
L P S+N T I LIPK ++ + +F PISLCNV++K+++K +ANRLKLV+ I
Sbjct: 431 WLQRGYFPSSLNETNICLIPKCESPITMKDFRPISLCNVLYKMVSKVLANRLKLVIEKCI 490
Query: 2320 HHTQSAFVPRRLITDNA 2370
QSAFV R I DNA
Sbjct: 491 SEEQSAFVEGRSIIDNA 507
Score = 106 bits (265), Expect(7) = e-178
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Frame = +1
Query: 802 MENILKDTDFEGMHVLDCDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDK-D 978
MENI + +D + R GGL +MWK ++ + S + + ++ + +K D
Sbjct: 1 MENIRVMLKYHSCLSIDVE----GRSGGLSVMWKESVKCRVMNYSRNFINIIVEDREKGD 56
Query: 979 WQFLGIYGWPVEGEKYLTWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKML 1158
W+ YG+P + + WEL+R L + + W +GDFN++L +K G
Sbjct: 57 WRLTCYYGYPERSRRRMAWELLRELRDMSSLPWCVIGDFNDLLSQEDKKGRLPHPNWLCS 116
Query: 1159 EFHKVIQDARLNDLGFDGFIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNR 1338
F + D L D+ +G+ +TW D I+ERLDR L + EW+ FPN ++ +L
Sbjct: 117 GFRSAVNDCDLTDIHLEGYPFTWIKSGGTDHVIEERLDRALVSTEWLAKFPNAKLTNLLS 176
Query: 1339 VASDHCPVLIQ 1371
SDH P+L+Q
Sbjct: 177 SHSDHSPILLQ 187
Score = 67.4 bits (163), Expect(7) = e-178
Identities = 31/70 (44%), Positives = 46/70 (65%)
Frame = +3
Query: 2370 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLDINESFVNLVMKCV 2549
L+A EI H +K +G A K+D+ KAYD+VE FL+GV++ + ++ +V +M CV
Sbjct: 508 LIAIEIIHALKRRTRGAKGELALKIDISKAYDKVEWSFLKGVLMRMGFSDKWVQWIMLCV 567
Query: 2550 SSVFFSTLVN 2579
SSV +S LVN
Sbjct: 568 SSVNYSALVN 577
Score = 63.9 bits (154), Expect(7) = e-178
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Frame = +2
Query: 1415 RKKFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGI 1594
+ +F+FE+ WL++E +++V +G W L + QK+ +C V+L +W R
Sbjct: 197 KHEFKFENSWLKEEDIEEVVNEG---WKHGENL-EIMQKLTHCAVKLQRWGRRKKRRFKD 252
Query: 1595 QLKKSEEKL----YKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDG 1762
++K+ EE++ YK D + + I++E W QRA+ +W+KDG
Sbjct: 253 EIKEYEEEMERTRYKGDSSN------MSRFQEAQQQHAKVLIQEEAFWRQRAKMHWLKDG 306
Query: 1763 DKNTAFF 1783
D NT FF
Sbjct: 307 DLNTKFF 313
Score = 55.1 bits (131), Expect(7) = e-178
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCEWADF 4042
W ++ PPKV+ LWR ++ LPT++ L+ + IC C + E H + DCE +
Sbjct: 999 WQIRAPPKVKHLLWRICRDCLPTRTRLQHHHVQCPAICELCRGANEDSRHVLFDCEESKN 1058
Query: 4043 FWKTCSL 4063
W L
Sbjct: 1059 CWNVAGL 1065
Score = 48.1 bits (113), Expect(7) = e-178
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Frame = +1
Query: 4129 KVDSDSHGLFAVLLWNIWDARNKFLFNDKALSHESFFVTATRCMEEY--MQSHISSPLLQ 4302
K D G A+ +W IW+ RN++++N + + V A+ E+ +Q+ SS +
Sbjct: 1089 KESKDVAGRVAMTIWLIWNNRNQWIWNHEKRNALQLGVQASHMWNEWYEIQNFSSSRGGE 1148
Query: 4303 PRRWKEI-WSHPEVSSFKINSDASI-MDGEGAGLGVVIRDHRGKVITTLTKFVDVEYEIN 4476
+ +++ W P K N DA DG G +R+ RG+ I + + + + I
Sbjct: 1149 EQVQQQLQWVPPRQGWLKCNVDAGFHNDGRITSGGWCLRNERGQFIRAGSYWKNGAHSIL 1208
Query: 4477 VAEALACREGILMAKRMQLSQIELETDN 4560
AEALA E + A M I E+D+
Sbjct: 1209 EAEALALLEAMKAACTMNRQHITFESDS 1236
>gb|PNY09839.1| ribonuclease H [Trifolium pratense]
Length = 1316
Score = 290 bits (741), Expect(7) = e-171
Identities = 157/408 (38%), Positives = 243/408 (59%), Gaps = 10/408 (2%)
Frame = +1
Query: 2605 PSRGLRQGEKLSPYLFIFCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLFFADDSIIF 2784
P RGLRQG+ LSPYLFI E +++I+++ G LHG+ +CR AP VSHL FADD +F
Sbjct: 586 PGRGLRQGDPLSPYLFILVTEGLTTLIKRSLASGELHGVKICRGAPSVSHLLFADDCFLF 645
Query: 2785 GRASEREIDETKNIISSYERASGQRINLEKSKISFSKGIHEAQQESLARRLGVQLVDKQK 2964
R++ E++ +I+ +YE A+GQ I+L KS++ FS+ + A QE L++ +GV+ V
Sbjct: 646 CRSTLDEVNHLMSILKTYEAAAGQEIHLTKSEVYFSRNLSTADQEDLSKIMGVRHVLGTG 705
Query: 2965 IYLGILTEVGH*KKHIFXXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAIPTYLMSCF 3144
YLG+ + +G KK +F +W+ R LS AGK ++IK+V QAIP+Y+MS +
Sbjct: 706 NYLGLPSMIGRKKKQVFAYIKDRVWKRINSWRGRALSRAGKEVMIKSVLQAIPSYVMSVY 765
Query: 3145 LVPMQTCQRINSIVSNFWWGHKRDERRIHWSS*QDICKSKLEGILGFGDLHCFNLAMLAK 3324
L+P T + I ++++FWWG + I W + + K +G +GF DLH FNLAM+AK
Sbjct: 766 LLPDSTIKDIERMMNSFWWGGGAHNKGIRWLAWDRMTYPKTQGGMGFRDLHSFNLAMIAK 825
Query: 3325 QGWHLVQDERSLLSKVLKAKYYPRVYFLQASIGHNPSYVWKSIVASQKILARGIRWNIGD 3504
QGW ++ SLL+K+ KA+Y+P+ F +A +GHNPSY W+ I +++IL G RW++G+
Sbjct: 826 QGWKIMTQAHSLLAKLYKARYFPKTSFFEAKLGHNPSYAWRGIWEARRILMNGCRWSVGN 885
Query: 3505 GKEVKVWFDPWIPENPTF---KPITQVPSN-ESRDLMVD-----DLVSVEGGCGILISLW 3657
G +KV +PW+ + P Q N +DLM+ D +E + I+
Sbjct: 886 GATIKVMQEPWLRDAAGAWLPSPHDQSVHNFNVKDLMIPNRKMWDKEKIESIFPLHIT-- 943
Query: 3658 KGLIQRMLN-PYYRSPFVLVEEKIGWFWHHSKNGSYVVKSRYQVARDM 3798
R+L P + +L E+K+ W + NG Y VKS Y++ ++
Sbjct: 944 ----NRILAIPLFD---MLEEDKLTWI--DNSNGLYSVKSGYKLMMNL 982
Score = 125 bits (313), Expect(7) = e-171
Identities = 76/197 (38%), Positives = 104/197 (52%)
Frame = +1
Query: 1780 FFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEGPLGAIN 1959
FFH A+ R+ I K+ N+ V Q + V +YF +F + L I
Sbjct: 312 FFHMSASSRQRAKKIDKLLNNDNTAVTTQPELREVALDYFNQLFKPNPT-NHDPVLSLIT 370
Query: 1960 LRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDVLDVILN 2139
++T E N+ L P +E+ +AL +MHP K+PG D FYQ FW+L D+ +
Sbjct: 371 PKITQEDNDKLVLPITKEELKEALFEMHPDKAPGPDGFNPAFYQHFWNLCGNDIFEAAQE 430
Query: 2140 ILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKLVLPSLI 2319
L P S+N T IVLIPK N + + PISLCNV++K+I+K +ANRLK L +
Sbjct: 431 WLERGYFPSSLNETNIVLIPKCDNPISMKDLRPISLCNVLYKMISKLLANRLKGCLGKCV 490
Query: 2320 HHTQSAFVPRRLITDNA 2370
QSAFV R I DNA
Sbjct: 491 SEEQSAFVEGRSILDNA 507
Score = 106 bits (264), Expect(7) = e-171
Identities = 50/167 (29%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Frame = +1
Query: 874 RRGGL*LMWKSMFDFKLWSDSLHHLGRMINN-EDKDWQFLGIYGWPVEGEKYLTWELMRT 1050
R GGL +MW+ ++ + S + + ++ E+++W+ YG+P G + W+L+R
Sbjct: 21 RSGGLAVMWRDTIKCRVMNYSRNFINLIVQEKEEEEWRLTCYYGYPERGRRRQAWDLLRQ 80
Query: 1051 LANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLGFDGFIYTWT 1230
+ + + W +GDFN++L +K G F + D L D+ +G+ YTW
Sbjct: 81 MRDMSDLPWCIIGDFNDLLAQDDKKGMHPHPNWLCNGFRHAVCDCDLTDIHLEGYPYTWV 140
Query: 1231 NGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLIQ 1371
+ I+ERLDR + N +W+ +FPN ++ +L SDH P+L+Q
Sbjct: 141 KSRGSPNVIEERLDRAMANSKWLLVFPNVKLVNLLTSHSDHSPILLQ 187
Score = 62.4 bits (150), Expect(7) = e-171
Identities = 29/70 (41%), Positives = 45/70 (64%)
Frame = +3
Query: 2370 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLDINESFVNLVMKCV 2549
L+A E+ H +K +G A K+D+ KAYD+V+ FLRGV+ L + +++ +M CV
Sbjct: 508 LIAIEVLHALKRRTRGMKGELALKIDISKAYDKVDWGFLRGVLERLGFSNRWIHWMMLCV 567
Query: 2550 SSVFFSTLVN 2579
SSV +S L+N
Sbjct: 568 SSVNYSVLMN 577
Score = 60.1 bits (144), Expect(7) = e-171
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 5/181 (2%)
Frame = +1
Query: 4126 KKVDSDSHGLFAVLLWNIWDARNKFLFNDKALSHESFFVTATRCMEEYMQS----HISSP 4293
K DS + G FA+L+W IW+ RN ++ND + + A EE++ + H
Sbjct: 1088 KNEDSSTAGRFAMLVWVIWNNRNNIVWNDTSEPGGRLGLKAKHLWEEWLSAQQLKHSRPH 1147
Query: 4294 LLQPRRWKEIWSHPEVSSFKINSDASI-MDGEGAGLGVVIRDHRGKVITTLTKFVDVEYE 4470
Q ++ W P K N DA +D G +RD G+ + T +++
Sbjct: 1148 ATQQQQQIPKWQKPSNGWLKCNIDAGFHVDMHKTSAGWCLRDDLGRFVMAETTWMEGNCS 1207
Query: 4471 INVAEALACREGILMAKRMQLSQIELETDNLSLYHRLARKQEDLSYFGNLIQEY*WQNVC 4650
I E++A + + ++ LS + ETD+ S+ ++ S F +I +C
Sbjct: 1208 IVEGESIALLKALQALEQRGLSHVIFETDSKSVVDAISHLSGGSSEFSFIISHINSILLC 1267
Query: 4651 N 4653
N
Sbjct: 1268 N 1268
Score = 54.3 bits (129), Expect(7) = e-171
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Frame = +2
Query: 1388 QNKGHIDGGRKK-FRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKW 1564
QN I GR FRFE+ WLQ++ ++V +G W G + + K C +L W
Sbjct: 187 QNSPMICNGRTHTFRFENSWLQEDDIGEVVEEG---WGKERG-VDIISKTSRCAEKLKGW 242
Query: 1565 ERSHFGNIGIQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRART 1744
R +K+ E++ +L + +++E W QRA+
Sbjct: 243 GRRKRMRFKQDIKECGEEMERL--RGCLDLSNSRRFREVQEKHARLLVQEEAYWRQRAKM 300
Query: 1745 NWIKDGDKNTAFF 1783
+W+K+GD NT FF
Sbjct: 301 HWLKEGDLNTKFF 313
Score = 44.7 bits (104), Expect(7) = e-171
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCEWADF 4042
W++ P K + LWR +KE LP++ L+++ + +C C E H + +CE +
Sbjct: 999 WSICAPSKAKHLLWRISKECLPSRVRLQEKHVPCPVLCPVCNHDREDDWHVLFECETSFQ 1058
Query: 4043 FWKTCSL------RLQFSDN 4084
+T L RLQ S N
Sbjct: 1059 ACQTAGLAATVESRLQHSSN 1078
>gb|PNX94875.1| ribonuclease H, partial [Trifolium pratense]
Length = 1291
Score = 286 bits (733), Expect(7) = e-168
Identities = 159/424 (37%), Positives = 242/424 (57%), Gaps = 8/424 (1%)
Frame = +1
Query: 2605 PSRGLRQGEKLSPYLFIFCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLFFADDSIIF 2784
P RGLRQG+ LSPYLF+ E S++I+K G LHG+ +CR AP VSHL FADD +F
Sbjct: 586 PGRGLRQGDPLSPYLFLLVTEGLSTLIKKYVASGDLHGVQICRGAPAVSHLLFADDCFLF 645
Query: 2785 GRASEREIDETKNIISSYERASGQRINLEKSKISFSKGIHEAQQESLARRLGVQLVDKQK 2964
R++ E + +I+ +YE ASGQ IN KS++ FS+ + A QE L++ +GV+ V
Sbjct: 646 CRSTIVETNTLMSILKTYESASGQEINFTKSEVFFSRNLSIAAQEDLSKIMGVKHVLGTG 705
Query: 2965 IYLGILTEVGH*KKHIFXXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAIPTYLMSCF 3144
YLG+ + +G KK +F +WK R LS AGK ++IK+V QAIP Y+MS +
Sbjct: 706 NYLGLPSMIGRKKKQVFAYIKDRIWKRINSWKGRALSRAGKEVMIKSVLQAIPAYVMSIY 765
Query: 3145 LVPMQTCQRINSIVSNFWWGHKRDERRIHWSS*QDICKSKLEGILGFGDLHCFNLAMLAK 3324
L+P + I +++ FWWG + + I W + + K +G +GF DLH FNLAM+AK
Sbjct: 766 LLPDSIIKDIERMMNAFWWGGGTNHKGIRWLAWDRMTHPKAKGGMGFRDLHYFNLAMIAK 825
Query: 3325 QGWHLVQDERSLLSKVLKAKYYPRVYFLQASIGHNPSYVWKSIVASQKILARGIRWNIGD 3504
QGW+++ +LL+K+ KA+Y+P ++ +GHNPSY W+ I +++IL G RW++G
Sbjct: 826 QGWNIMTRPNTLLAKLYKARYFPNSSLFESKLGHNPSYAWRGIWKARQILMNGCRWSVGT 885
Query: 3505 GKEVKVWFDPWI-PENPTFKPITQVPSNES-RDLMVDDLVSVEGGCGILISLW-KGLIQR 3675
G +K+ +PW+ E+ + P P N+ + V+DL + LW K I+
Sbjct: 886 GTNIKIMSEPWLRGEHGAWLP---SPQNQGVNNFFVNDLFLPN------LKLWDKEKIES 936
Query: 3676 ML-----NPYYRSPFVLVEEKIGWFWHHSKNGSYVVKSRYQVARDMRDEEVVAPSTSQSN 3840
+ N + P + E+ W S NG+Y VKS Y++ ++ + A + N
Sbjct: 937 IFPMYIANRIFEVPLFDMIEEDKLIWTDSTNGNYSVKSGYKLIMNITGKIDAADAQKDWN 996
Query: 3841 MELW 3852
LW
Sbjct: 997 -SLW 999
Score = 131 bits (329), Expect(7) = e-168
Identities = 75/197 (38%), Positives = 105/197 (53%)
Frame = +1
Query: 1780 FFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEGPLGAIN 1959
FFH A R+ I K+ N V Q G+ V YF +F + + + L +
Sbjct: 312 FFHMTATSRRRAKKIGKLLNDDNIAVTTQSGLCEVAVSYFNQLFQSNPTVH-DPILSLVT 370
Query: 1960 LRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDVLDVILN 2139
+++ E N+ L RP +E+ +AL QMHP K+PG D FYQ FW+L D+ +
Sbjct: 371 PKISPEDNDALVRPITKEELKEALFQMHPDKAPGPDGFNPAFYQHFWNLCSDDIFEAASE 430
Query: 2140 ILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKLVLPSLI 2319
L P S+N T I LIPK +N + + PISLCNV++K+I+K +ANRLK L +
Sbjct: 431 WLERGYFPSSLNETNICLIPKVENPISMKDLRPISLCNVLYKMISKLLANRLKSYLDKCV 490
Query: 2320 HHTQSAFVPRRLITDNA 2370
QSAF+ R I DNA
Sbjct: 491 SEEQSAFIEGRSILDNA 507
Score = 105 bits (262), Expect(7) = e-168
Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 1/191 (0%)
Frame = +1
Query: 802 MENILKDTDFEGMHVLDCDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINN-EDKD 978
ME + F +D + R GGL ++WK ++ + S + + ++ E+++
Sbjct: 1 MERLRVSMKFSSCLTVDVE----GRSGGLSVLWKDTISCRVMNYSRNFINLIVQEKEEEE 56
Query: 979 WQFLGIYGWPVEGEKYLTWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKML 1158
W+ YG+P + W L+R L + + W VGDFN++L +K G
Sbjct: 57 WRLTCYYGYPERDRRRQAWNLLRELRDMSDLPWCIVGDFNDLLAQEDKKGNHPHPNWLCN 116
Query: 1159 EFHKVIQDARLNDLGFDGFIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNR 1338
F + D L D+ +G+ +TWT + I+ERLDR + N +W+ I+PN ++ +L
Sbjct: 117 GFRDAVCDCDLTDIYLEGYPFTWTKSRGSPNVIEERLDRAMANSKWLMIYPNVKLVNLLT 176
Query: 1339 VASDHCPVLIQ 1371
SDH P+L+Q
Sbjct: 177 SHSDHSPILLQ 187
Score = 60.8 bits (146), Expect(7) = e-168
Identities = 27/70 (38%), Positives = 44/70 (62%)
Frame = +3
Query: 2370 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLDINESFVNLVMKCV 2549
L+A E+ H +K +G A K+D+ KAYD+V+ F+RG++ L + ++ +M C+
Sbjct: 508 LIAIEVLHALKRRTRGYKGELALKIDISKAYDKVDWGFMRGMLERLGFSNKWIQWMMLCI 567
Query: 2550 SSVFFSTLVN 2579
SSV +S LVN
Sbjct: 568 SSVNYSVLVN 577
Score = 55.5 bits (132), Expect(7) = e-168
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 4/177 (2%)
Frame = +1
Query: 4135 DSDSHGLFAVLLWNIWDARNKFLFNDKALSHESFFVTATRCMEEY---MQSHISSPLLQP 4305
D + GLFA+L+W IW+ RN ++N S + A E++ QS S Q
Sbjct: 1091 DKEQAGLFAMLIWVIWNNRNNKVWNMANESGRNLGFKARHLWEDWFVVQQSRHGSQQEQQ 1150
Query: 4306 RRWKEIWSHPEVSSFKINSDASI-MDGEGAGLGVVIRDHRGKVITTLTKFVDVEYEINVA 4482
++ W P +K N DA + G +RDH G+ + T +++ +
Sbjct: 1151 QQHIMRWQKPSFGWYKCNVDAGFHKELNKTSTGWCLRDHMGRFVMAETTWMEGNFSTLEG 1210
Query: 4483 EALACREGILMAKRMQLSQIELETDNLSLYHRLARKQEDLSYFGNLIQEY*WQNVCN 4653
E++A + + S + +E+D+ S+ + S F LI +CN
Sbjct: 1211 ESIAVLNALEALGQRGFSHVIIESDSKSVVDATHHLRAGSSEFSLLINHINNVLICN 1267
Score = 49.7 bits (117), Expect(7) = e-168
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 1424 FRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGIQLK 1603
FRFE+ WL+++ ++V DGW + + + K C +L W R ++
Sbjct: 200 FRFENSWLKEDDIGEVVE---DGWG-GVEDVDVTLKTARCAEKLKGWGRRKRMRFKQEVL 255
Query: 1604 KSEEKLYKL-DQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKNTAF 1780
+ E++ ++ D H + I++E W QRA+T+W+K+GD NT F
Sbjct: 256 ECSEEMERMRDCHDPSTS---WRYKEVQEKHARLLIQEEAYWRQRAKTHWLKEGDLNTKF 312
Query: 1781 F 1783
F
Sbjct: 313 F 313
Score = 43.5 bits (101), Expect(7) = e-168
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 3854 DGFWNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCE 4030
+ W++ PPK + LWR +K LPT+ L+ R + C C +E H + C+
Sbjct: 996 NSLWSIHAPPKAKHLLWRISKGCLPTRLRLQDRRVTCSTXCPICEQHDEDEWHVLFGCD 1054
>ref|XP_010667704.1| PREDICTED: uncharacterized protein LOC104884717 [Beta vulgaris subsp.
vulgaris]
Length = 1578
Score = 411 bits (1056), Expect(4) = e-167
Identities = 248/706 (35%), Positives = 363/706 (51%), Gaps = 6/706 (0%)
Frame = +1
Query: 1762 GQKYGFFFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEG 1941
G + FFH+ A+GRK RN+I+K+K+ + G V R+ +YF+ +F+ +E
Sbjct: 633 GDRNSKFFHQRASGRKWRNTIRKLKDDEDNEHVGVREVGRIAMDYFRNMFTFTNPPMIEQ 692
Query: 1942 PLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDV 2121
L R+T MNE L RP+ DE+ AL
Sbjct: 693 ALIDFEPRVTGVMNEALRRPYNEDEIRLALMSQ--------------------------- 725
Query: 2122 LDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKL 2301
+L ILN P +N T+I LIPKK NA+ ++ F PI+LCNVV+K+++K +ANRLK+
Sbjct: 726 --TVLGILNGGNIPHYLNRTYITLIPKKSNADHMSQFRPIALCNVVYKLVSKVLANRLKI 783
Query: 2302 VLPSLIHHTQSAFVPRRLITDNASWLLKFFIV*RIIKLGNVGLSLLNWIC*KPMIGLNVP 2481
L ++ QSAF P LITDN F + +K+ G + K +
Sbjct: 784 FLNEIVSVNQSAFTPGHLITDNILVAFDMFHHMKNLKIRE-GCMAMKLDMSKAYDRIEWN 842
Query: 2482 FYVVSCFHXXXXXXXXXXXXXXXXXXXXXXXXXGQPGVSFSPSRGLRQGEKLSPYLFIFC 2661
F G+P F+P RG+RQG+ LSPYLFI C
Sbjct: 843 FLEAVLRRFGFDSGWRCRVMDCVRSVSFSILVNGKPTNDFTPHRGIRQGDPLSPYLFILC 902
Query: 2662 AEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLFFADDSIIFGRASEREIDETKNIISSYE 2841
AEVFS ++RKA+ L GI V AP V HL FADD I+F RAS R+ + + ++ YE
Sbjct: 903 AEVFSHLLRKAEERNSLKGIKVAPSAPSVDHLLFADDCIVFFRASMRDAEAIQEALTIYE 962
Query: 2842 RASGQRINLEKSKISFSKGIHEAQQESLARRLGVQLVDKQKIYLGILTEVGH*KKHIFXX 3021
+SGQ++N +K+ ISFS+G+ + ++ ++A L V+ VD YLG+ T VG KK I
Sbjct: 963 LSSGQKVNFDKTNISFSRGVPQDRRNAVAVHLRVREVDIHDRYLGLPTVVGRSKKVITRG 1022
Query: 3022 XXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAIPTYLMSCFLVPMQTCQRINSIVSNFWW 3201
WK LS AG+ ++IK VAQ++PTY MS F P C I S++S FWW
Sbjct: 1023 VKEKLWKKLQGWKGMVLSKAGREVMIKVVAQSLPTYAMSVFKFPSSLCDEIRSLISQFWW 1082
Query: 3202 GHKRDERRIHWSS*QDICKSKLEGILGFGDLHCFNLAMLAKQGWHLVQDERSLLSKVLKA 3381
G KR ER+IHW + + +C+ K+EG LGF D+ FN A+L KQ W L SL+ ++ +A
Sbjct: 1083 GQKRGERKIHWVAWKKLCRPKVEGGLGFRDMKLFNWALLGKQAWRLTLQNGSLIEQIWRA 1142
Query: 3382 KYYPRVYFLQASIGHNPSYVWKSIVASQKILARGIRWNIGDGKEVKVWFDPWIPENPTFK 3561
+YYP F+ +++G PSY W+ I ++ +L RG+RW +GDG+ +++W D WIP + + K
Sbjct: 1143 RYYPNSNFMDSNLGATPSYTWRGIWEAKWVLRRGVRWRVGDGESIRIWKDAWIPGSQSRK 1202
Query: 3562 PITQVPSNESRDLMVDDLVSVEGGCGILISLWK-GLIQRMLNPY--YRSPFVLVEEKI-- 3726
I N + D V L+ + WK L+ + P+ R + + ++
Sbjct: 1203 -IISPRGNANVDAEVGALIDP------ITKSWKEDLVADLFLPFEAARVLSIPISHRLPA 1255
Query: 3727 -GWFWHHSKNGSYVVKSRYQVARDMRDEEVVAPSTSQSNMELWRWI 3861
W K+G Y VKS Y + D + S + +LW I
Sbjct: 1256 DTLCWDLEKDGCYSVKSAYNALSN--DTWQLNEGPSLCSKDLWNII 1299
Score = 142 bits (358), Expect(4) = e-167
Identities = 81/224 (36%), Positives = 124/224 (55%), Gaps = 3/224 (1%)
Frame = +1
Query: 718 TVRVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLDCDLNSGSRRGGL*LM 897
+V L+ LI + P +FL ETKL ++D F H L D R GGL L+
Sbjct: 299 SVTSLRDLIRREAPSLIFLSETKLSVEFSR--IRDR-FGDFHSLAVDFVG--RSGGLALL 353
Query: 898 WKSMFDFKLWSDSLHHLGRMINNE--DKDWQFLGIYGWPVEGEKYLTWELMRTLANNMNS 1071
WK L S S+HH+ ++ + +W+ G YGWP ++L+W L+ TLA +
Sbjct: 354 WKKDVVADLISMSVHHIDVKMSEGLWEAEWRSTGFYGWPETNNRHLSWSLLATLATQSDL 413
Query: 1072 QWLCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLGFDGFIYTWTNGQNGDG 1251
W+C+GDFNEIL+ EK GG + ++ F +V+ + L+D+ + G+ +T+ NG+
Sbjct: 414 PWVCIGDFNEILFHHEKKGGNDRADWQINNFRRVVDECGLSDVPYSGYEFTYDNGRELVE 473
Query: 1252 NIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPV-LIQWDR 1380
N+Q RLDR L W +IFP ++HL+R SDH P+ L+ W +
Sbjct: 474 NVQCRLDRALVTTTWWEIFPEGFLHHLDREWSDHAPIKLLLWKK 517
Score = 61.2 bits (147), Expect(4) = e-167
Identities = 32/124 (25%), Positives = 56/124 (45%)
Frame = +2
Query: 1412 GRKKFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIG 1591
G K FRFE +W + C+ ++ + +G L K++ C +L W FG +
Sbjct: 524 GPKPFRFEHLWATEGECEGVIE------IAWLGGYSLDSKLEMCASDLKDWSARKFGKVF 577
Query: 1592 IQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKN 1771
+LKK + L +L++ + + +E W QR+R W+ +GD+N
Sbjct: 578 AELKKKRKALQRLNKGGLTEAQLNRRRKLLGEIAELMSV-EEVYWKQRSRVLWLAEGDRN 636
Query: 1772 TAFF 1783
+ FF
Sbjct: 637 SKFF 640
Score = 52.0 bits (123), Expect(4) = e-167
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCEWADF 4042
W+ + P+V+ F WR + LPT+ L KR ++ C CG EE+ HA+ DC A
Sbjct: 1300 WSATVLPRVKLFAWRAYLDALPTRLGLHKRMCSMEASCSLCGAREESAFHALFDCGLAQS 1359
Query: 4043 FW 4048
W
Sbjct: 1360 VW 1361
Score = 62.8 bits (151), Expect = 9e-06
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Frame = +1
Query: 4324 WSHPEVSSFKINSDASIMDGEGAGLGVVIRDHRGKVITTLTKFVDVEYEINVAEALACRE 4503
W+ P+ KIN DA + +GLG V RD G V+ L+ V +E+ +AEA A E
Sbjct: 1419 WTAPKADWVKINVDAGQVGEFCSGLGAVCRDEGGVVLGCLSVQSLVAWELRIAEAKAALE 1478
Query: 4504 GILMAKRMQLSQIELETDNLSLYHRLARK----------QEDLSYFGNLIQEY*WQNVCN 4653
GI MA R SQ+ +E+D L L L ED+ + + + W V
Sbjct: 1479 GIKMAIRGGYSQVIIESDCLLLIQALRNPVVGASNFHLVVEDILFLSSQLDAVIWSFVKR 1538
Query: 4654 S--RLAFSLRCIQPV-------VGDLPDSLVDLANSKII 4743
S ++A L QPV V D+P+++V LA+ ++
Sbjct: 1539 SGNKVAHVLAHFQPVEIGHRYWVHDVPENIVQLASIDLL 1577
>dbj|GAU23029.1| hypothetical protein TSUD_336770 [Trifolium subterraneum]
Length = 1478
Score = 296 bits (757), Expect(7) = e-163
Identities = 158/403 (39%), Positives = 237/403 (58%), Gaps = 9/403 (2%)
Frame = +1
Query: 2605 PSRGLRQGEKLSPYLFIFCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLFFADDSIIF 2784
P RGLRQG+ LSPYLFI E +++I+ G LHGI +CR AP+VSHL FADD +F
Sbjct: 851 PGRGLRQGDPLSPYLFILVTEGLTALIKNYVARGDLHGIQICRGAPKVSHLLFADDCFLF 910
Query: 2785 GRASEREIDETKNIISSYERASGQRINLEKSKISFSKGIHEAQQESLARRLGVQLVDKQK 2964
R++ E ++ +I+ YE ASGQ INL KS++ FS+ + A QE L+R +GV+ V
Sbjct: 911 CRSTLEETNQLMSILKIYEEASGQEINLTKSEVFFSRNLSVAAQEDLSRIMGVKHVLGTG 970
Query: 2965 IYLGILTEVGH*KKHIFXXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAIPTYLMSCF 3144
YLG+ + +G KK +F +W+ R LS AGK I+IK+V QAIP+Y+MS +
Sbjct: 971 SYLGLPSMIGRRKKEVFAYLKDRVWKRINSWRGRALSKAGKEIMIKSVLQAIPSYVMSIY 1030
Query: 3145 LVPMQTCQRINSIVSNFWWGHKRDERRIHWSS*QDICKSKLEGILGFGDLHCFNLAMLAK 3324
L+P T + I +++++WWG + + I W + + K G +GF DLH FNLAM+AK
Sbjct: 1031 LLPESTIKDIERMLNSYWWGGGGNNKGIRWLAWDRMTHPKAFGGMGFRDLHAFNLAMIAK 1090
Query: 3325 QGWHLVQDERSLLSKVLKAKYYPRVYFLQASIGHNPSYVWKSIVASQKILARGIRWNIGD 3504
QGW+++ +L+SK+ KA+Y+P L + IGHNPSYVW+ I ++ IL G RW+IG+
Sbjct: 1091 QGWNIMTKPHTLVSKLYKARYFPNSSLLDSQIGHNPSYVWRGIWKARHILMHGCRWSIGN 1150
Query: 3505 GKEVKVWFDPWIPENPTFKPITQVPSNESR---DLMVDDLVSVEGGCGILISLWKGLIQR 3675
G +K+ +PW+ + K +PS + + ++ V+DL+ + + +W
Sbjct: 1151 GTSIKIMSEPWLRD----KGDAWIPSPQVQGVYNMTVNDLMKIN------VKMWNTDKID 1200
Query: 3676 MLNPYYRS------PFVLVEEKIGWFWHHSKNGSYVVKSRYQV 3786
L P + + P E+ W W S +G Y VKS Y +
Sbjct: 1201 SLFPLHIANRITDIPLFEAVEEDKWIWMDSLHGHYSVKSGYNL 1243
Score = 130 bits (326), Expect(7) = e-163
Identities = 78/197 (39%), Positives = 105/197 (53%)
Frame = +1
Query: 1780 FFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEGPLGAIN 1959
FFH A+ R+ I+K+ N V Q + V YF +F A+T + L +
Sbjct: 577 FFHMSASSRQRAKKIEKLMNEDNMAVTTQPELCEVARNYFDQLFKAKTAAH-DSILALMV 635
Query: 1960 LRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDVLDVILN 2139
++T E N L P +E+ AL QMHP KSPG D FYQ FW L D+ + +
Sbjct: 636 PKITIEDNARLVAPITKEELKAALFQMHPDKSPGPDGFNPAFYQHFWELCGNDIYEAVQE 695
Query: 2140 ILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKLVLPSLI 2319
LN P S+N T I LIPK +N + + PISLCNV++K+++K +ANRLK L +
Sbjct: 696 WLNRGFFPSSLNETNICLIPKCENPISMKDMRPISLCNVLYKVVSKLLANRLKGCLDKCV 755
Query: 2320 HHTQSAFVPRRLITDNA 2370
QSAFV R I DNA
Sbjct: 756 SEEQSAFVEGRSILDNA 772
Score = 97.4 bits (241), Expect(7) = e-163
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
Frame = +1
Query: 802 MENILKDTDFEGMHVLDCDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDK-D 978
ME++ + F +D + R GGL +MW+ ++ + S + + ++ ++ +
Sbjct: 266 MEHVRVNLKFNSCLSVDVE----GRSGGLSVMWRDTISCRVMNYSRNFINLIVADKGNVE 321
Query: 979 WQFLGIYGWPVEGEKYLTWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKML 1158
W+ YG+P G + W+++R L + W VGDFN++L +K G
Sbjct: 322 WRLTCYYGYPERGRRKQAWDMLRDLRDMSYLPWCIVGDFNDLLSQADKKGFHPHPNWLCN 381
Query: 1159 EFHKVIQDARLNDLGFDGFIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNR 1338
F + D L ++ +G+ YTW I+ERLDR + N +W+ +PN ++ +L
Sbjct: 382 GFRSAVSDCDLTNIYLEGYPYTWIKSGGTPYVIEERLDRAMANSKWLMNYPNAKLLNLLA 441
Query: 1339 VASDHCPVLIQWDRIWSEQGPH 1404
SDH P+L+Q + PH
Sbjct: 442 SHSDHSPILLQNSPMIRNGSPH 463
Score = 62.4 bits (150), Expect(7) = e-163
Identities = 29/70 (41%), Positives = 44/70 (62%)
Frame = +3
Query: 2370 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLDINESFVNLVMKCV 2549
L+A E+ H +K ++G A K+D+ KAYD+V+ FLRG++ L ++ +M CV
Sbjct: 773 LIAIEVIHALKRRTRGRKGELALKIDISKAYDKVDWGFLRGMLERLGFANQWIQWMMLCV 832
Query: 2550 SSVFFSTLVN 2579
SSV +S LVN
Sbjct: 833 SSVNYSVLVN 842
Score = 49.7 bits (117), Expect(7) = e-163
Identities = 32/126 (25%), Positives = 54/126 (42%)
Frame = +2
Query: 1406 DGGRKKFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGN 1585
+G FRFE+ WL+++ +V +G W G + K C L +W R
Sbjct: 459 NGSPHSFRFENSWLKEDDIDLVVEEG---WGRERGT-DITFKTSRCAETLKEWGRKKRMR 514
Query: 1586 IGIQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGD 1765
++ + +++ +L T I++E W QRA+ +W+K+GD
Sbjct: 515 FKQEVLECSDEMERLTGRH--DTTSAGRYREVAEKHARLLIQEETYWRQRAKMHWLKEGD 572
Query: 1766 KNTAFF 1783
NT FF
Sbjct: 573 LNTNFF 578
Score = 41.6 bits (96), Expect(7) = e-163
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDC 4027
W ++ PPK + LWR K LPT++ L++R + C C + E H + C
Sbjct: 1264 WKIQAPPKAKHLLWRICKGCLPTRNRLQERRVSCLLSCPLCDHNNENDWHILFYC 1318
Score = 37.4 bits (85), Expect(7) = e-163
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 4135 DSDSHGLFAVLLWNIWDARNKFLFNDKALSHESFFVTATRCMEEY 4269
D + GLFAVLLW +W+ RN ++ND S + A EE+
Sbjct: 1356 DMQTAGLFAVLLWVLWNNRNNSVWNDTREPGRSLGIKARLMWEEW 1400
>dbj|GAU37771.1| hypothetical protein TSUD_102880 [Trifolium subterraneum]
Length = 1688
Score = 416 bits (1069), Expect(5) = e-161
Identities = 263/681 (38%), Positives = 364/681 (53%), Gaps = 14/681 (2%)
Frame = +1
Query: 1780 FFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEGPLGAIN 1959
FFH +A+ RK RN I K+++ G +E Q + V + YF +FS +T E L +
Sbjct: 732 FFHAMASTRKKRNMIMKLQSENGEVMEKQEDLCNVAKTYFDTLFSNDTGTS-ESILNYVP 790
Query: 1960 LRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDVLDVILN 2139
+ +E N +L PF +E AL QM+ KSPG D FY++FW + ++ +
Sbjct: 791 EAINEEDNNMLMAPFVKEEFRIALFQMNSDKSPGPDGFNPAFYKRFWDISGDEIFRTGVM 850
Query: 2140 ILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKLVLPSLI 2319
L P + T IVLIPKK N + +F PISLCNV++KII+K +ANRLKL+LP I
Sbjct: 851 WLEQCAFPLQVVETNIVLIPKKDNPVTMKDFRPISLCNVLYKIISKVLANRLKLLLPKCI 910
Query: 2320 HHTQSAFVPRRLITDN---ASWLLKFFIV*RIIKLGNVGLSL--------LNWIC*KPMI 2466
QSAFV R I DN AS +L ++G V L + +NW K M+
Sbjct: 911 SQEQSAFVENRSIIDNVMVASEILHHMKCKTRGRVGEVALKIDISKAYDRVNWGYVKNMM 970
Query: 2467 GLNVPFYVVSCFHXXXXXXXXXXXXXXXXXXXXXXXXXGQPGVSFSPSRGLRQGEKLSPY 2646
+H G +P RGLRQG+ LSPY
Sbjct: 971 RK-------MGYHEKWVNWMGLCMESVQYHVQVNGERVGLQ----TPGRGLRQGDPLSPY 1019
Query: 2647 LFIFCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLFFADDSIIFGRASEREIDETKNI 2826
LFI CAE S ++++ + G +HG+ VCR AP ++HL FADD +F RA ERE
Sbjct: 1020 LFIICAEGLSILLKRLESRGEIHGVKVCRGAPILTHLLFADDCFLFCRAEEREATILVEA 1079
Query: 2827 ISSYERASGQRINLEKSKISFSKGIHEAQQESLARRLGVQLVDKQKIYLGILTEVGH*KK 3006
+ YE ASGQ IN++KS+I FSK +E + L V YLG+ + VG KK
Sbjct: 1080 LKKYEEASGQAINMQKSEILFSKNTSGELKEKVQNILQVTESMGSNKYLGLPSMVGRKKK 1139
Query: 3007 HIFXXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAIPTYLMSCFLVPMQTCQRINSIV 3186
IF NW ++LS AG+ +LIK+VAQ+IPTY MS FL+P + I ++
Sbjct: 1140 AIFNYIRDRIWKRIQNWSGKHLSKAGREVLIKSVAQSIPTYCMSVFLLPTTLGEEIQRML 1199
Query: 3187 SNFWWGHKRDE-RRIHWSS*QDICKSKLEGILGFGDLHCFNLAMLAKQGWHLVQDERSLL 3363
++FWWG R+ R I+W S + K G +GF L+ FNLAML KQGW L + +++
Sbjct: 1200 NSFWWGSNRNNGRGINWLSWDKLTMRKEHGGMGFRHLYGFNLAMLGKQGWKLATNHDTIV 1259
Query: 3364 SKVLKAKYYPRVYFLQASIGHNPSYVWKSIVASQKILARGIRWNIGDGKEVKVWFDPWIP 3543
+++ KA+YYPR FL+A++GHNPS++W+SI SQ I+ GIRW +GDGK ++VW D W+
Sbjct: 1260 ARIFKARYYPRGNFLEANLGHNPSFIWRSIHTSQVIVKGGIRWRLGDGKSIRVWRDAWL- 1318
Query: 3544 ENPTFKPITQVPSNESRDLMVDDLVSVEGGCGILISLWKGLI-QRMLNPYYRSP-FVLVE 3717
N +T D+ V DL+ EGG SL G +R +P F V+
Sbjct: 1319 RNEANSYVTTPMILGREDMCVHDLIE-EGGREWRRSLIMGSFNERDARCILSTPLFGDVQ 1377
Query: 3718 EKIGWFWHHSKNGSYVVKSRY 3780
E + W HS+NG Y VKS Y
Sbjct: 1378 EDVP-SWKHSRNGEYSVKSAY 1397
Score = 124 bits (310), Expect(5) = e-161
Identities = 70/217 (32%), Positives = 111/217 (51%), Gaps = 1/217 (0%)
Frame = +1
Query: 721 VRVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLDCDLNSGSRRGGL*LMW 900
V L+ LI P +FL ET + K+E + F+G +D R GGL +W
Sbjct: 396 VPTLRDLIRKYKPDVIFLCETLVHANKIEEVRVRLGFDGSFAVD----KIGRSGGLACLW 451
Query: 901 KSMFDFKLWSDSLHHLGRMINNED-KDWQFLGIYGWPVEGEKYLTWELMRTLANNMNSQW 1077
KS F+ L + S + + I ++ W+F G YG P + +W+L+RTLA + + W
Sbjct: 452 KSPFEGHLINYSTYFINMEIRHQQIPTWRFTGFYGIPEGERRRDSWDLLRTLAQDNSLPW 511
Query: 1078 LCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLGFDGFIYTWTNGQNGDGNI 1257
+GDFN+IL EK ++ F + IQD L D+ G+ +TW + +
Sbjct: 512 CIMGDFNDILSNEEKRSKVDHPPWRIRGFREAIQDCNLIDIPLQGYPFTWIRRRGKPDMV 571
Query: 1258 QERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLI 1368
+E+LDR + W+D+FPN ++ +L SDH P+L+
Sbjct: 572 EEKLDRAMATERWIDLFPNSKLSNLIADRSDHSPILL 608
Score = 52.0 bits (123), Expect(5) = e-161
Identities = 24/67 (35%), Positives = 35/67 (52%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCEWADF 4042
W LKIP K++ FLWR A+ LPT+ L+++G++ C C + E H C A
Sbjct: 1420 WELKIPQKMKVFLWRAARGCLPTRYRLQQKGVNCPHTCAYCQNNFENDWHVFFGCVKAQE 1479
Query: 4043 FWKTCSL 4063
W+ L
Sbjct: 1480 IWEEAGL 1486
Score = 45.1 bits (105), Expect(5) = e-161
Identities = 30/123 (24%), Positives = 53/123 (43%)
Frame = +2
Query: 1415 RKKFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGI 1594
++ FRFE+ WL++ Q +V W L L +K++ C +L +W +
Sbjct: 619 KRSFRFENAWLKENELQDVVTSC---WRRDEELEVL-EKLNQCREDLERWGKQMRLRFKK 674
Query: 1595 QLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKNT 1774
+ + +L L + A H +++ W QRA+ +W++ GD NT
Sbjct: 675 DIDQCRVELEALREAEAFHEEYTITRNKMSLLLS----QEDAFWRQRAKVHWLQGGDSNT 730
Query: 1775 AFF 1783
FF
Sbjct: 731 KFF 733
Score = 31.2 bits (69), Expect(5) = e-161
Identities = 36/164 (21%), Positives = 58/164 (35%), Gaps = 29/164 (17%)
Frame = +1
Query: 4153 LFAVLLWNIWDARNKFLFNDKALSHESFFVTATRCMEEYMQSHIS--------------- 4287
LF W IW RN+ ++ D L A+ + ++ + S
Sbjct: 1518 LFVAAFWCIWKRRNQKIWEDIELHPSVSLQLASDIIYQWKTAQTSHQRQQTSAAILPHSA 1577
Query: 4288 ----------SPLLQPRRWKEIWSHPEVSSFKINSDASIMDGEGA-GLGVVIRDHRGKVI 4434
S + + IW+ P K N DA+I + G G+ +RD +G I
Sbjct: 1578 ATRNASGEERSVSVTTSAVRVIWTPPVQGMLKCNVDAAIFKEQNCFGAGMCLRDDKGNFI 1637
Query: 4435 ---TTLTKFVDVEYEINVAEALACREGILMAKRMQLSQIELETD 4557
TT + YE AEA + I + + + +E D
Sbjct: 1638 RAQTTWNYGNPLPYE---AEAWGLKAAISWLRNLGYVNVVIELD 1678
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 268 bits (686), Expect(6) = e-161
Identities = 147/434 (33%), Positives = 236/434 (54%), Gaps = 10/434 (2%)
Frame = +1
Query: 2581 GQPGVSFSPSRGLRQGEKLSPYLFIFCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLF 2760
GQP P+RG+RQG+ LSP LF+ C E ++ KA+ G++ GI + V+HL
Sbjct: 620 GQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAGKITGIQFQDKKVSVNHLL 679
Query: 2761 FADDSIIFGRASEREIDETKNIISSYERASGQRINLEKSKISFSKGIHEAQQESLARRLG 2940
FADD+++ +A+++E +E +S Y + SGQ INL KS I+F K + ++ + R G
Sbjct: 680 FADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAITFGKNVDIQIKDWIKSRSG 739
Query: 2941 VQLVDKQKIYLGILTEVGH*KKHIFXXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAI 3120
+ L YLG+ + K+ +F W ++ LS GK +L+K++A A+
Sbjct: 740 ISLEGGTGKYLGLPECLSGSKRDLFGFIKEKLQSRLTGWYAKTLSQGGKEVLLKSIALAL 799
Query: 3121 PTYLMSCFLVPMQTCQRINSIVSNFWWGHKRDERRIHWSS*QDICKSKLEGILGFGDLHC 3300
P Y+MSCF +P CQ++ +++ +FWW + +R+IHW S Q + K +G GF DL C
Sbjct: 800 PVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRKIHWLSWQRLTLPKDQGGFGFKDLQC 859
Query: 3301 FNLAMLAKQGWHLVQDERSLLSKVLKAKYYPRVYFLQASIGHNPSYVWKSIVASQKILAR 3480
FN A+LAKQ W ++Q++ SL S+V +++Y+ FL A+ G PSY W+SI+ +++L +
Sbjct: 860 FNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSATRGSRPSYAWRSILFGRELLMQ 919
Query: 3481 GIRWNIGDGKEVKVWFDPWIPENPTFKPITQVPSNESRDLMVDDLVSVEGGCGILISLWK 3660
G+R IG+G++ VW D W+ + +P+ N R + VD + V W
Sbjct: 920 GLRTVIGNGQKTFVWTDKWLHDGSNRRPL-----NRRRFINVD--LKVSQLIDPTSRNWN 972
Query: 3661 GLIQRMLNPYYRSPFVLVEEKI-----GWFWHHSKNGSYVVKSRY-----QVARDMRDEE 3810
+ R L P+ +L + + + W HS NG Y VK+ Y QV + E
Sbjct: 973 LNMLRDLFPWKDVEIILKQRPLFFKEDSFCWLHSHNGLYSVKTGYEFLSKQVHHRLYQEA 1032
Query: 3811 VVAPSTSQSNMELW 3852
V PS + ++W
Sbjct: 1033 KVKPSVNSLFDKIW 1046
Score = 139 bits (350), Expect(6) = e-161
Identities = 74/231 (32%), Positives = 120/231 (51%)
Frame = +1
Query: 682 LSWNCRGLRNPLTVRVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLDCDL 861
+SWNC+GLRNP T+R LK + D P +FLMETK + + ++ +H ++ +
Sbjct: 3 ISWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETKNSQDFVYKVFCWLGYDFIHTVEPE- 61
Query: 862 NSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDKDWQFLGIYGWPVEGEKYLTWEL 1041
R GGL + WKS + + + + +++ +K W +YG PV + WE
Sbjct: 62 ---GRSGGLAIFWKSHLEIEFLYADKNLMDLQVSSRNKVWFISCVYGLPVTHMRPKLWEH 118
Query: 1042 MRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLGFDGFIY 1221
+ ++ W +GDFN+I EK GG ++ + F ++ + +++LG G +
Sbjct: 119 LNSIGLKRAEAWCLIGDFNDIRSNDEKLGGPRRSPSSFQCFEHMLLNCSMHELGSTGNSF 178
Query: 1222 TWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLIQW 1374
TW G D +Q +LDRC GN W IFPN + L + SDH PVL+++
Sbjct: 179 TW-GGNRNDQWVQCKLDRCFGNPAWFSIFPNAHQWFLEKFGSDHRPVLVKF 228
Score = 119 bits (298), Expect(6) = e-161
Identities = 66/202 (32%), Positives = 106/202 (52%)
Frame = +1
Query: 1762 GQKYGFFFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEG 1941
G K FFH + + +N + + + ++ +F+ +F++ L
Sbjct: 347 GDKNTGFFHATVHSERLKNELSFLLDENDQEFTRNSDKGKIASSFFENLFTSTYILTHNN 406
Query: 1942 PLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDV 2121
L + ++T EMN L + EV A+ ++ +PG D ALF+Q+ W L+K +
Sbjct: 407 HLEGLQAKVTSEMNHNLIQEVTELEVYNAVFSINKESAPGPDGFTALFFQQHWDLVKHQI 466
Query: 2122 LDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKL 2301
L I P NHT I LIPK + + +++ PISLC+V++KII+K + RLK
Sbjct: 467 LTEIFGFFETGVLPQDWNHTHICLIPKITSPQRMSDLRPISLCSVLYKIISKILTQRLKK 526
Query: 2302 VLPSLIHHTQSAFVPRRLITDN 2367
LP+++ TQSAFVP+RLI+DN
Sbjct: 527 HLPAIVSTTQSAFVPQRLISDN 548
Score = 68.9 bits (167), Expect(6) = e-161
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = +3
Query: 2370 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLDINESFVNLVMKCV 2549
L+A E+ H ++ N + AFK DM KAYDRVE PFL +M L N +++ +M CV
Sbjct: 550 LVAHEMIHSLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISWIMNCV 609
Query: 2550 SSVFFSTLVNG 2582
+SV +S L+NG
Sbjct: 610 TSVSYSVLING 620
Score = 56.2 bits (134), Expect(6) = e-161
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +2
Query: 3845 SFGDGFWNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRD 4024
S D WNL PK++ FLW+ +P + LR RGI D C C ETI H + +
Sbjct: 1040 SLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFE 1099
Query: 4025 CEWADFFW 4048
C A W
Sbjct: 1100 CPLARQVW 1107
Score = 36.6 bits (83), Expect(6) = e-161
Identities = 26/123 (21%), Positives = 49/123 (39%)
Frame = +2
Query: 1415 RKKFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGI 1594
R +FR++ D C +++ + + +S G + C + W+ S N
Sbjct: 236 RGQFRYDKRLDDDPYCIEVIHRSWNS-AMSQGTHSSFFSLIECRRAISVWKHSSDTNAQS 294
Query: 1595 QLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKNT 1774
++K+ + L D ++ + +E W Q++R W+ GDKNT
Sbjct: 295 RIKRLRKDL---DAEKSIQIPCWPRIEYIKDQLSLAYGDEELFWRQKSRQKWLAGGDKNT 351
Query: 1775 AFF 1783
FF
Sbjct: 352 GFF 354
>ref|XP_019095662.1| PREDICTED: uncharacterized protein LOC104763574 [Camelina sativa]
Length = 1802
Score = 233 bits (593), Expect(7) = e-161
Identities = 141/439 (32%), Positives = 227/439 (51%), Gaps = 14/439 (3%)
Frame = +1
Query: 2581 GQPGVSFSPSRGLRQGEKLSPYLFIFCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLF 2760
G P P+RGLRQG+ LSPYLF+ C E+ M+ KA+ G++ G+ + AP +SHL
Sbjct: 1064 GVPYRDIQPTRGLRQGDPLSPYLFVICTEMLVRMLNKAEEEGKITGLKIASGAPSISHLL 1123
Query: 2761 FADDSIIFGRASEREIDETKNIISSYERASGQRINLEKSKISFSKGIHEAQQESLARRLG 2940
FADDS+ + R E EI++ II Y ASGQR+N +KS I F K I E + + +LG
Sbjct: 1124 FADDSLFYCRKEEEEINQMVRIIEEYSLASGQRVNYQKSSIYFGKLIPEETRGEIKHKLG 1183
Query: 2941 VQLVDKQKIYLGILTEVGH*KKHIFXXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAI 3120
+ + IYLG+ K I W++ +LS GK +L+KAV A+
Sbjct: 1184 ISKEGGEGIYLGLPEAFKGSKVTILSYLKERLNQRVNGWQTMFLSQGGKEVLLKAVVMAL 1243
Query: 3121 PTYLMSCFLVPMQTCQRINSIVSNFWWGHKRDERRIHWSS*QDICKSKLEGILGFGDLHC 3300
PTY M+CF +P N++ S + D+ +K G + F D+
Sbjct: 1244 PTYTMTCFKLPR------NALASM----GRADQ-------------AKSRGGIEFRDIEA 1280
Query: 3301 FNLAMLAKQGWHLVQDERSLLSKVLKAKYYPRVYFLQASIGHNPSYVWKSIVASQKILAR 3480
FN A+L KQ W ++ + SL+++V K++Y+ + L A +G+ PSY W+S+ A+Q++L +
Sbjct: 1281 FNDALLGKQLWRIITQKESLVARVFKSRYFRKSDPLTAPLGYRPSYAWRSLQAAQELLRQ 1340
Query: 3481 GIRWNIGDGKEVKVWFDPWIPENPT--FKPITQVP----SNESRDLMVDDLVSVEG---G 3633
G R +G+GKE+ +W W+ P + Q+P S+ ++ + V DL+ +G
Sbjct: 1341 GARAVVGNGKEINIWQHQWLQSKPARGLSRVKQIPPGFQSSVAQLVTVKDLLGPDGREWN 1400
Query: 3634 CGILISLWKGLIQRMLNPYYRSPFVLVEEKIGWFWHHSKNGSYVVKSRYQVARDM----- 3798
+L ++ ++ + F + K G+ W ++K+G Y VKS Y V +
Sbjct: 1401 RDLLSLAFENEDKQCIEEIRPGGF---QTKDGYTWDYTKSGLYSVKSGYWVVLKVIRQRG 1457
Query: 3799 RDEEVVAPSTSQSNMELWR 3855
R + V PS ++W+
Sbjct: 1458 RAQVVDQPSLDALYQQIWK 1476
Score = 143 bits (360), Expect(7) = e-161
Identities = 78/206 (37%), Positives = 122/206 (59%), Gaps = 4/206 (1%)
Frame = +1
Query: 1762 GQKYGFFFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQ----L 1929
G K FFH R+ +N I+ +++ G + + RV E YFKM++++E
Sbjct: 791 GDKNTKFFHAATKNRRAQNRIQVLEDKDGIEWFAEEDLGRVAESYFKMLYTSEDVGYRLQ 850
Query: 1930 EMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLI 2109
EME ++ EMNE+LS ++EV +A+ +++P K PG D + F+Q+FW +
Sbjct: 851 EMEQGTNTVST----EMNEMLSAEVSLEEVKEAVFEINPNKCPGPDGLTGFFFQQFWERV 906
Query: 2110 KLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIAN 2289
D+ +++ + + IN T I LIPKK A + +F PISLCNVV+KI++K +A+
Sbjct: 907 GEDITEMVRSFMRTGRLEEEINRTNICLIPKKMKASKLQDFRPISLCNVVYKIVSKLLAS 966
Query: 2290 RLKLVLPSLIHHTQSAFVPRRLITDN 2367
RLK +LP++I TQ+AFV RLI+DN
Sbjct: 967 RLKRILPNIISETQAAFVKGRLISDN 992
Score = 119 bits (298), Expect(7) = e-161
Identities = 65/217 (29%), Positives = 112/217 (51%)
Frame = +1
Query: 715 LTVRVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLDCDLNSGSRRGGL*L 894
L VR L+ + P+ +FL ETK + +EN++ + +H ++ + GGL L
Sbjct: 458 LMVRHLREICGQYFPEVIFLCETKNKRSYLENVVGHLGYHDLHTVE----PLGKSGGLAL 513
Query: 895 MWKSMFDFKLWSDSLHHLGRMINNEDKDWQFLGIYGWPVEGEKYLTWELMRTLANNMNSQ 1074
MWK K+ + + +DK++ IYG PV GE+ WE + +
Sbjct: 514 MWKEEVHIKVLHSDKRTIDVQVKWQDKEFFLSCIYGDPVRGERGKVWERLTRIGIERRGP 573
Query: 1075 WLCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLGFDGFIYTWTNGQNGDGN 1254
W+ GDFNE++ EK GG + +EF +++ L ++ G+ ++W +N +
Sbjct: 574 WMMTGDFNELVDPSEKKGGPVRSMATCVEFQQMLSACGLWEVRHKGYQFSWFGNRN-EEL 632
Query: 1255 IQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVL 1365
+Q RLDR + N EW+++FP Q +L +V+SDH P++
Sbjct: 633 VQCRLDRTVANQEWMELFPEAQAVYLKKVSSDHSPLI 669
Score = 56.6 bits (135), Expect(7) = e-161
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +3
Query: 2370 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLDINESFVNLVMKCV 2549
L+A E+ H + + A K D+ KAYDRVE FL M L + S++ LVM+CV
Sbjct: 994 LIAHEMLHALSSRNKCAENFIAIKTDISKAYDRVEWSFLGNAMTYLGFSGSWIRLVMECV 1053
Query: 2550 SSVFFSTLVNG 2582
+V + L+NG
Sbjct: 1054 KTVEYQVLING 1064
Score = 53.5 bits (127), Expect(7) = e-161
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 5/140 (3%)
Frame = +1
Query: 4165 LLWNIWDARNKFLFNDKALSHESFFVTATRCMEEYMQSHISSPLLQPR----RWKEIWSH 4332
+LW +W +RN+ FN K + E EE+ ++ L+P + W
Sbjct: 1580 VLWRLWKSRNELCFNGKDIGVERLIKLVEEDAEEWRGREENTGRLRPNPSALSLEVRWRP 1639
Query: 4333 PEVSSFKINSDASI-MDGEGAGLGVVIRDHRGKVITTLTKFVDVEYEINVAEALACREGI 4509
P + K N D + +G+ +G+G V+RDH+G V+ + + + E A R +
Sbjct: 1640 PPLEWVKCNMDGAWPREGDRSGVGWVLRDHQGSVLWMGARALPRTRSVLEVETEALRWAM 1699
Query: 4510 LMAKRMQLSQIELETDNLSL 4569
+ R Q ++ E+D+ L
Sbjct: 1700 VSVARFQYKKVIFESDSQDL 1719
Score = 51.6 bits (122), Expect(7) = e-161
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCEWADF 4042
W L+ PPK+ F+W+C L L I + +C RC ET+ H C +A
Sbjct: 1475 WKLEAPPKIHHFVWKCLSNCLSVNGNLAYPHISKEALCIRCPNCTETVNHLFFQCPYARV 1534
Query: 4043 FWKTCSL 4063
W S+
Sbjct: 1535 VWAVSSV 1541
Score = 50.4 bits (119), Expect(7) = e-161
Identities = 25/120 (20%), Positives = 57/120 (47%)
Frame = +2
Query: 1424 FRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGIQLK 1603
F+++ W+Q E +++ + + L +K+ C E+ W+R + N ++++
Sbjct: 683 FKYDQRWVQREGFCDFMKETWESEKVKQSN-SLVEKLTRCRKEISGWKRRNKPNSSLRIQ 741
Query: 1604 KSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKNTAFF 1783
+ ++ + Q S + ++++E+ W Q++R W+ +GDKNT FF
Sbjct: 742 ELHSRIDRATQQSPFS---IEEVRRLKSELNKEYVQEEKFWQQKSRFIWLNNGDKNTKFF 798
>dbj|GAU39028.1| hypothetical protein TSUD_59840 [Trifolium subterraneum]
Length = 1626
Score = 508 bits (1307), Expect(3) = e-161
Identities = 273/708 (38%), Positives = 404/708 (57%), Gaps = 8/708 (1%)
Frame = +1
Query: 1762 GQKYGFFFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEG 1941
G K FFH A+ RK N+IKK+K+ G W GQ V V ++F +F++ +
Sbjct: 617 GDKNTKFFHGKASQRKKTNAIKKLKDEDGIWWHGQDKVDGVLIDFFSNLFTSSNPTNTDH 676
Query: 1942 PLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDV 2121
A+N ++D+ + SRP+ ++EV +A+ QMHP K+PG D +PALF+QK+W ++ D+
Sbjct: 677 VCEAVNKTLSDDQKDWCSRPYNLEEVKEAVDQMHPLKAPGPDGLPALFFQKYWYIVGKDI 736
Query: 2122 LDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKL 2301
+ +L+ILND+ SP S+N TF+ LIPK KN +F PISLCNV+ K++TK +ANR+K
Sbjct: 737 CEKVLSILNDNCSPESLNRTFVALIPKCKNPGSPNHFRPISLCNVMMKMVTKCVANRMKC 796
Query: 2302 VLPSLIHHTQSAFVPRRLITDNASWLLKFFIV*RIIKLGNVGLSLLNWIC*KPMIGLNVP 2481
+LP ++ QSAFV RLITDNA ++ F + G G+ L K + P
Sbjct: 797 ILPEVVDEEQSAFVKGRLITDNALIAMECFHWLKKKTKGKKGMMALKLDMAKAYDRMEWP 856
Query: 2482 FYVVSCFHXXXXXXXXXXXXXXXXXXXXXXXXXGQPGVSFSPSRGLRQGEKLSPYLFIFC 2661
F + GQP SF P RG+RQG+ LSPY+FI C
Sbjct: 857 FIRSALQAIGFPLTMVNLIMNCISTVSYQLLVNGQPSRSFKPERGIRQGDPLSPYVFILC 916
Query: 2662 AEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLFFADDSIIFGRASEREIDETKNIISSYE 2841
A V SSMI K +HGI V R AP+++HL FADDS++F RA+++E + NI+ +Y+
Sbjct: 917 ANVLSSMIHKGARNNEIHGIQVARNAPKITHLLFADDSLLFARANQKESEVILNILQTYQ 976
Query: 2842 RASGQRINLEKSKISFSKGIHEAQQESLARRLGVQLVDKQKIYLGILTEVGH*KKHIFXX 3021
ASGQ ++LEKS++SFS+ + ++ + ++ V+ V YL + G KK IF
Sbjct: 977 TASGQLVSLEKSEVSFSRNLPTIEKNMICNKIDVKAVTSHSKYLVLPVIFGRSKKEIFAN 1036
Query: 3022 XXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAIPTYLMSCFLVPMQTCQRINSIVSNFWW 3201
WK + LS AGK LIK+VAQAIP YLMSC+ +P C I ++++ FWW
Sbjct: 1037 VQERIWKKIKGWKEKCLSRAGKETLIKSVAQAIPNYLMSCYKLPTGCCDNIEAMLAKFWW 1096
Query: 3202 GHKRDERRIHWSS*QDICKSKLEGILGFGDLHCFNLAMLAKQGWHLVQDERSLLSKVLKA 3381
G +R+IHW S + K+K +G LGF FN A+L KQ W L+Q+ SLL+KV K+
Sbjct: 1097 GTTEKQRKIHWVSWNKLGKAKSKGGLGFRSFEDFNKALLGKQCWRLLQNPDSLLAKVFKS 1156
Query: 3382 KYYPRVYFLQASIGHNPSYVWKSIVASQKILARGIRWNIGDGKEVKVWFDPWIPENPTFK 3561
+Y+PR F+ AS+G+ PSY W+S+ +++++ G RW IG+G++V +W D W+PE FK
Sbjct: 1157 RYFPRSNFMDASVGYQPSYAWRSLCNAREVIDMGARWLIGNGQDVHIWNDKWLPEQDKFK 1216
Query: 3562 PITQVPSNESRDLMVDDLVSVEGGCGILISLW-KGLIQRMLNPYYRSPFVLVEEKIGW-- 3732
+ V SN + MV DL++ + W K LI +P+ + + I W
Sbjct: 1217 VWSPV-SNLVPNAMVSDLINP------VTKAWDKNLILNCFSPFEAEQILNI--PISWRL 1267
Query: 3733 -----FWHHSKNGSYVVKSRYQVARDMRDEEVVAPSTSQSNMELWRWI 3861
WH KNG + V+S Y + + R++ S+S+ + LW+ I
Sbjct: 1268 PADKLIWHWEKNGEFSVRSAYHMLSEDRNKNSPEASSSRDQL-LWKTI 1314
Score = 58.9 bits (141), Expect(3) = e-161
Identities = 28/74 (37%), Positives = 38/74 (51%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCEWADF 4042
W + +P +++FLWR AK ILPT+ L K+GI LD C C E EH C +
Sbjct: 1315 WKVNVPNCIKNFLWRVAKAILPTRGRLEKKGITLDTTCPLCFNDIECNEHLFMQCPLSKQ 1374
Query: 4043 FWKTCSLRLQFSDN 4084
W + L L +N
Sbjct: 1375 VWFSSPLGLHAPNN 1388
Score = 55.8 bits (133), Expect(3) = e-161
Identities = 31/116 (26%), Positives = 49/116 (42%)
Frame = +1
Query: 4153 LFAVLLWNIWDARNKFLFNDKALSHESFFVTATRCMEEYMQSHISSPLLQPRRWKEIWSH 4332
LF+ LW IW RNK +F ++ ++ + E+ S + W H
Sbjct: 1409 LFSTTLWMIWKGRNKLIFKNEKFCPIYVAAASSDFVAEFNSGTCSFENIPSCDNPGKWEH 1468
Query: 4333 PEVSSFKINSDASIMDGEGAGLGVVIRDHRGKVITTLTKFVDVEYEINVAEALACR 4500
PE K+N DA G G+++R+H G V T ++ +AE +A R
Sbjct: 1469 PEQGKLKVNIDAGCFSNGTTGWGMIMRNHLGMVEFAATHLEKIKVSSTLAETMALR 1524
>gb|PNY15111.1| ribonuclease H [Trifolium pratense]
Length = 1334
Score = 507 bits (1306), Expect(3) = e-160
Identities = 275/706 (38%), Positives = 404/706 (57%), Gaps = 4/706 (0%)
Frame = +1
Query: 1756 RRGQKYGFFFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEM 1935
+ G K FFH A+ RK N+IKK+K+S G W G+ V R+ +YF IFS + +
Sbjct: 321 KEGDKNTKFFHGKASQRKKVNNIKKLKDSHGVWWHGEDNVERLLIDYFADIFSTSDPVNV 380
Query: 1936 EGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKL 2115
+ + ++T+E E S F +EV +A+ QMHP K+PG D +PALF+QK+W ++
Sbjct: 381 DSTCDVVRGKLTEEHKEFCSSLFSAEEVKEAIFQMHPLKAPGPDGLPALFFQKYWHIVGR 440
Query: 2116 DVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRL 2295
DV ++L ILN+ SP IN TFI LIPK K+ + ++ PISLCNVV KI+TK IANR+
Sbjct: 441 DVQRLVLQILNNDRSPEDINRTFIALIPKVKSPQAPKDYRPISLCNVVMKIVTKVIANRI 500
Query: 2296 KLVLPSLIHHTQSAFVPRRLITDNASWLLKFFIV*RIIKLGNVGLSLLNWIC*KPMIGLN 2475
K +LP ++ QSAFV RLITDNA ++ F + K G G L K +
Sbjct: 501 KPILPDIVDEEQSAFVQGRLITDNALIAMECFHWMKKKKRGKKGTMALKLDMSKAYDRIE 560
Query: 2476 VPFYVVSCFHXXXXXXXXXXXXXXXXXXXXXXXXXGQPGVSFSPSRGLRQGEKLSPYLFI 2655
F + GQP F+P RGLRQG+ LSPYLFI
Sbjct: 561 WTFVKATLNSMGFPCKLVDLIMKCICTVSYQILINGQPSKLFTPERGLRQGDPLSPYLFI 620
Query: 2656 FCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLFFADDSIIFGRASEREIDETKNIISS 2835
CA+V S +++K G +HGI + R+AP++SHLFFADDS++F RAS E N+++
Sbjct: 621 LCADVLSGLVKKQAETGSMHGIQIARQAPKISHLFFADDSLLFARASAAEAGVILNVLAE 680
Query: 2836 YERASGQRINLEKSKISFSKGIHEAQQESLARRLGVQLVDKQKIYLGILTEVGH*KKHIF 3015
Y++ASGQ +NL+KS++SFS+ + ++ + R+GV+ VD YLG+ G KK IF
Sbjct: 681 YQKASGQVVNLDKSEVSFSQNVRNEDKDMIRNRMGVKTVDTHSKYLGLPVVFGRSKKIIF 740
Query: 3016 XXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAIPTYLMSCFLVPMQTCQRINSIVSNF 3195
WK + LS AGK ILIKAVAQAIP Y+M C+ +P CQ I ++++ F
Sbjct: 741 SFVIDRVWKKLKGWKEKCLSRAGKEILIKAVAQAIPNYIMGCYKLPNSCCQEIETMLAKF 800
Query: 3196 WWGHKRDERRIHWSS*QDICKSKLEGILGFGDLHCFNLAMLAKQGWHLVQDERSLLSKVL 3375
WWG K ER+IHW S + + K+K +G +GF ++ FN A+L K W L+ E SL+ ++
Sbjct: 801 WWGSKGGERKIHWMSWERLSKTKKDGGMGFRGINNFNKALLGKHCWRLMTGEESLMGRIF 860
Query: 3376 KAKYYPRVYFLQASIGHNPSYVWKSIVASQKILARGIRWNIGDGKEVKVWFDPWIPENPT 3555
K++Y+PR FL+A IG+ PSY W+SI ++ ++ G RW IG+G+ VK+ D W+P
Sbjct: 861 KSRYFPRTSFLEAKIGYQPSYAWRSIQSATDVMKLGTRWRIGNGESVKIREDRWLPNQVG 920
Query: 3556 FKPITQVPSNESRDL---MVDDLVSVEGGCGILISLWKGLIQRMLN-PYYRSPFVLVEEK 3723
FK ++ E+ L ++D ++ + + +++L+ P + L +K
Sbjct: 921 FKVWSRGEELENGALVSALIDPDTKQWNRQLVVQTFYPDEAKQILSIPISQR---LPADK 977
Query: 3724 IGWFWHHSKNGSYVVKSRYQVARDMRDEEVVAPSTSQSNMELWRWI 3861
I WH+ ++G Y V+S + + + +V A S Q N LWR I
Sbjct: 978 I--IWHYERDGEYSVRSAHHLLKQHNSRDVAASSGQQMN-NLWREI 1020
Score = 60.5 bits (145), Expect(3) = e-160
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCEWADF 4042
W +P +V++FLWR K ILPT++ L ++G+ ++ +C +C + ETI+H C
Sbjct: 1021 WKAPVPNRVRNFLWRLGKNILPTRANLVRKGVQIENLCPQCHSAPETIDHLFLHCHLTQL 1080
Query: 4043 FW 4048
W
Sbjct: 1081 TW 1082
Score = 53.1 bits (126), Expect(3) = e-160
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Frame = +1
Query: 4135 DSDSHGLFAVLLWNIWDARNKFLFNDKALSHESFFVTATRCMEEYMQS---HISSPLLQP 4305
D+ LF VL+W IW+ARN +FN+K + + A M+E S H ++P+
Sbjct: 1109 DTRGAQLFCVLMWKIWNARNNLVFNNKLVDPIAIAQEAMYFMQELSPSPHEHNATPMQDA 1168
Query: 4306 -RRWKEIWSHPEVSSFKINSDASIMDGEGAGLGVVIRDHRGKVITTLTKFVDVEYEINVA 4482
+ + S P V DA G G G+VI + G+V+ + + ++ E +A
Sbjct: 1169 VLAAQPMPSAPHV----FYVDAGCFSGNATGWGMVIYNQSGRVVLSACRKELIDVEPVLA 1224
Query: 4483 EALACREGILMAKRMQLSQIELETD 4557
EA+ R + A + ++ I + +D
Sbjct: 1225 EAIGVRWCLQKAIELNMTDIVIVSD 1249
Score = 128 bits (322), Expect(2) = 2e-37
Identities = 69/200 (34%), Positives = 110/200 (55%), Gaps = 2/200 (1%)
Frame = +1
Query: 775 METKLVTAKMENILKDTDFEGMHVLDCDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHL-- 948
MET+L +ME I + F +DC + R GG+ L+W + S S +H+
Sbjct: 1 METRLKEDEMEKIKRRCGFSFGISVDCRGSGRERAGGISLLWSDQVSLSVISYSFNHILC 60
Query: 949 GRMINNEDKDWQFLGIYGWPVEGEKYLTWELMRTLANNMNSQWLCVGDFNEILYTFEKTG 1128
++ +W GIYG+P E K+ TW+L+ L+ + S+W+C GD N++L + EK G
Sbjct: 61 SCADGDDGANWFLSGIYGFPEEFNKWKTWQLVNQLSTQVGSRWVCFGDLNDVLSSEEKMG 120
Query: 1129 GRQKDANKMLEFHKVIQDARLNDLGFDGFIYTWTNGQNGDGNIQERLDRCLGN*EWVDIF 1308
G + N++ + + D L D GF+G+ +TW+NG+ + NIQ RLDR L ++ + F
Sbjct: 121 GVARTQNQLGLGRQCMADCGLLDPGFEGYPFTWSNGRQNEENIQCRLDRTLVTIDFQNRF 180
Query: 1309 PNYQVYHLNRVASDHCPVLI 1368
+V HL R SDH ++I
Sbjct: 181 SPIRVVHLPRYGSDHAALMI 200
Score = 60.1 bits (144), Expect(2) = 2e-37
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Frame = +2
Query: 1418 KKFRFESMWLQDESCQKMVRQG*DGW----VISMGLIGLKQKIDNCGVELLKWERSHFGN 1585
K FRFE +W +D+ C+ VR+ W + + +G +++D +E N
Sbjct: 215 KLFRFEQVWTKDDRCEDEVRRV---WHKAETMCVAKLGSIKQLDKV------FEDYQISN 265
Query: 1586 IGIQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGD 1765
+ ++K EE+L + + +A I I +E +W QR+R W+K+GD
Sbjct: 266 VRKEIKSIEEELKEFNAWAANPEEITRYKDREKRHGELLQI-EEIIWRQRSRAVWLKEGD 324
Query: 1766 KNTAFFFTKLLMEGRRVILSRKLKIPRGLGW 1858
KNT FF K + ++V +KLK G+ W
Sbjct: 325 KNTKFFHGK-ASQRKKVNNIKKLKDSHGVWW 354
>ref|XP_009140393.1| PREDICTED: uncharacterized protein LOC103864388 [Brassica rapa]
Length = 1377
Score = 258 bits (660), Expect(7) = e-158
Identities = 150/424 (35%), Positives = 224/424 (52%), Gaps = 1/424 (0%)
Frame = +1
Query: 2581 GQPGVSFSPSRGLRQGEKLSPYLFIFCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLF 2760
GQ F+P RG+RQG+ LSP+LFI CAE + KA+ G L G+ + P V HL
Sbjct: 629 GQSYGHFTPERGIRQGDPLSPFLFILCAEALVHTMSKAEQEGVLTGMKLAPSCPAVQHLL 688
Query: 2761 FADDSIIFGRASEREIDETKNIISSYERASGQRINLEKSKISFSKGIHEAQQESLARRLG 2940
FADDS RAS E E + Y +SGQ IN +KS I+F GI + LA L
Sbjct: 689 FADDSFFLCRASLAECTEFLRRLKLYGDSSGQMINFQKSAITFGAGIDPIMRRVLAELLN 748
Query: 2941 VQLVDKQKIYLGILTEVGH*KKHIFXXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAI 3120
++ YLG+ K+ + W ++ LS GK +L+K++A A+
Sbjct: 749 IEKEGGDGKYLGLPECFSGSKQQLLAFIGEKMSKRLKGWFAKKLSFGGKEVLLKSIAMAL 808
Query: 3121 PTYLMSCFLVPMQTCQRINSIVSNFWWGHKRDERRIHWSS*QDICKSKLEGILGFGDLHC 3300
P Y MSCF + CQ+I S +++FWW ++++IHW S + +C SK G LGF D+
Sbjct: 809 PVYAMSCFRLTKHLCQKIMSAMASFWWDENDEKKKIHWISWKKLCISKENGGLGFRDIED 868
Query: 3301 FNLAMLAKQGWHLVQDERSLLSKVLKAKYYPRVYFLQASIGHNPSYVWKSIVASQKILAR 3480
FN A+LAKQ W L+ D SL++++ K +Y+ F+ + G+ PSY W+SI+ +++L +
Sbjct: 869 FNQALLAKQAWRLLNDPTSLIARIYKGRYFASSDFMNSGKGYRPSYAWRSILFGRELLNK 928
Query: 3481 GIRWNIGDGKEVKVWFDPWIPENPTFKPITQVPSNESRDLMVDDLVSVEGGCGILISLWK 3660
G+ +IG+G VW WI + +PI + P + +L V L+ +G + L
Sbjct: 929 GLMKSIGNGNSTFVWSHNWILDETPRRPINKQPEIDI-NLRVSSLIGDDGQWDV-NKLQC 986
Query: 3661 GLIQRMLNPYYRSPFVLVEEKIGWFWHHSKNGSYVVKSRYQVARDMRD-EEVVAPSTSQS 3837
Q + + P V ++ W +S NGSY VKS Y+VA ++ EV A S
Sbjct: 987 RFPQNEVTRIRQLPVGDVPDRD--IWAYSPNGSYTVKSGYKVATQAKETAEVQAMSLKPG 1044
Query: 3838 NMEL 3849
+EL
Sbjct: 1045 VLEL 1048
Score = 126 bits (316), Expect(7) = e-158
Identities = 74/237 (31%), Positives = 112/237 (47%), Gaps = 7/237 (2%)
Frame = +1
Query: 673 MSCLSWNCRGLRNPLTVRVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLD 852
M+ L WNCRGLR+ LTVR L+ + + P F+FL+ETK + + + F+ +++D
Sbjct: 1 MTTLVWNCRGLRSNLTVRRLEEMCREHLPDFLFLLETKNSSDHVIKLWSSLGFDHCYLVD 60
Query: 853 CDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDKDWQFLGIYGWPVEGEKYLT 1032
GGL L WK + K+ S S + + + +YG PV +
Sbjct: 61 ----PVGLSGGLALFWKKKHEVKILSASARIIDTEVKLGAVVFYMSFVYGDPVRQRRIAV 116
Query: 1033 WELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLGFDG 1212
W ++ +A N W GDFNE++ EK GG + + +F + +D RL ++ G
Sbjct: 117 WNELKVIALNRTGGWFLAGDFNELMNNSEKVGGPPRQESSFFDFRAMARDCRLKEIPSSG 176
Query: 1213 FIYTW-------TNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPV 1362
+W NG +Q RLDR GN EW IFP +L + SDH P+
Sbjct: 177 NRLSWGGVREIMENGVKEKVWVQCRLDRAFGNAEWFRIFPQSHTVYLEKTGSDHRPI 233
Score = 119 bits (298), Expect(7) = e-158
Identities = 65/202 (32%), Positives = 110/202 (54%)
Frame = +1
Query: 1762 GQKYGFFFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEG 1941
G K FH R+ +N I + ++ G + + +V EYF+ +F + ++
Sbjct: 356 GDKNTKVFHGWVESRRMKNKIHSLIDNAGIEQFSEDEMGKVAVEYFQELFHSTGSADVSE 415
Query: 1942 PLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDV 2121
L + R+T+ MN L +P E+ +A+ ++ +PG D M F+QKFW+++ V
Sbjct: 416 LLDGMAPRVTESMNIGLIKPISDAEIRRAVKEIKSDSTPGVDGMTGQFFQKFWNIVGPQV 475
Query: 2122 LDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKL 2301
+ +D P N+T + L+PK +N + + PISLC+VV+KI++K + +RLK+
Sbjct: 476 THEVRRFFDDGLLPVDWNYTELCLLPKVQNPNQMKDLRPISLCSVVYKIVSKVLCDRLKV 535
Query: 2302 VLPSLIHHTQSAFVPRRLITDN 2367
VLP ++ Q AFV RLI+DN
Sbjct: 536 VLPHIVSPAQGAFVAGRLISDN 557
Score = 64.3 bits (155), Expect(7) = e-158
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 2370 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLDINESFVNLVMKCV 2549
L+A E+ H ++ N A K A K DM KAYDRVE FL + L L ++ +V+ +M CV
Sbjct: 559 LIAHEMVHGLRTNPACKSDFIAIKTDMSKAYDRVEWDFLEALFLKLGFHQRWVSWIMLCV 618
Query: 2550 SSVFFSTLVNGPTWC*FFP 2606
SV +S ++NG ++ F P
Sbjct: 619 RSVSYSVILNGQSYGHFTP 637
Score = 53.5 bits (127), Expect(7) = e-158
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCEWADF 4042
W + PK+++FLWR A L L RG++LD C+ C + E+IEH + C A
Sbjct: 1053 WKVATLPKIRNFLWRAASGALAVAERLNTRGLNLDLRCKICKAATESIEHVLFKCSLAHE 1112
Query: 4043 FWKTCSLR 4066
W + +
Sbjct: 1113 AWSSAGFQ 1120
Score = 50.4 bits (119), Expect(7) = e-158
Identities = 29/121 (23%), Positives = 59/121 (48%)
Frame = +2
Query: 1421 KFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGIQL 1600
+F F+ W Q +++R+G IS G + ++I +C EL KW+R N + +
Sbjct: 247 RFMFDKRWCQKPEITEVIRRGWCSNFIS-GQGSVSERIKSCRQELCKWKRHANVNSSVTI 305
Query: 1601 KKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKNTAF 1780
++ +L ++++ L++ + ++E W Q+ + +W++ GDKNT
Sbjct: 306 RRLRREL-EVEESKRWPNLLILPSLRLDLEKA--YDEEEAFWKQKCKNSWLQVGDKNTKV 362
Query: 1781 F 1783
F
Sbjct: 363 F 363
Score = 27.7 bits (60), Expect(7) = e-158
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 8/98 (8%)
Frame = +1
Query: 4165 LLWNIWDARNKFLFNDKALSHESFFVTATRCMEEYMQSHISSP-------LLQPRRWKEI 4323
+LW IW RN L+ A + S + + +EE H + + +
Sbjct: 1157 ILWTIWKNRNMLLY---AETQVSITIQIKQALEEACTWHELNKKAVSLENITGLNEETKR 1213
Query: 4324 WSHPEVSSFKINSDASIMDGE-GAGLGVVIRDHRGKVI 4434
W P K N A+ + +G+ ++RD RG V+
Sbjct: 1214 WDPPLAGYVKCNFHANWRNAALHSGVAFIVRDQRGNVL 1251
>ref|XP_019149681.1| PREDICTED: uncharacterized protein LOC109146487 [Ipomoea nil]
Length = 1255
Score = 407 bits (1046), Expect(3) = e-158
Identities = 238/658 (36%), Positives = 346/658 (52%), Gaps = 6/658 (0%)
Frame = +1
Query: 1828 KIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQ 2007
K +S G W+EG +T +Y++ IF++ T + G+I R+T+ NE L RPF+
Sbjct: 356 KFYHSDGDWIEGD-AMTNEILDYYRGIFNSSTPTIDDEFFGSIQSRVTNIQNESLLRPFE 414
Query: 2008 VDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFI 2187
EV AL M+P K+PG D M FYQ FW ++ DV ILN LN P +N T I
Sbjct: 415 EKEVKAALFSMYPDKAPGPDGMNPGFYQHFWDVVGSDVSTYILNCLNTRSIPGKLNETNI 474
Query: 2188 VLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDN 2367
+LIPKKK E+V+N+ PI+L NV+++++ K I R+K ++ S+I +QSAF+ RLITDN
Sbjct: 475 ILIPKKKTPEMVSNYRPIALSNVIYRVMAKIITARMKPLMESIISESQSAFISGRLITDN 534
Query: 2368 ASWLLKFFIV*RIIKLGNVGLSLLNWIC*KPMIGLNVPFYVVSCFHXXXXXXXXXXXXXX 2547
+ + G G L K + PF
Sbjct: 535 ILIAAEVGHFLNRKQCGLAGWGALKLDMAKAYDRMEWPFLEGMLRALGFDERWIELLMMC 594
Query: 2548 XXXXXXXXXXXGQPGVSFSPSRGLRQGEKLSPYLFIFCAEVFSSMIRKAKMGGRLHGILV 2727
G +P+RGLRQG+ LSPYLFI CAE S ++++A+ G +HG V
Sbjct: 595 VTTVSYSVLVNGSTTDQITPTRGLRQGDPLSPYLFIICAEGLSMLLQQAQARGEIHGCRV 654
Query: 2728 CRRAPEVSHLFFADDSIIFGRASEREIDETKNIISSYERASGQRINLEKSKISFSKGIHE 2907
R AP ++HLFFADDS+ F +A+ +E K +S YE+ SGQ +N KS I +SK
Sbjct: 655 ARGAPSITHLFFADDSLFFFKANTQEAGVVKRCLSEYEKMSGQAVNYHKSNICYSKNTRS 714
Query: 2908 AQQESLARRLGVQLVDKQKIYLGILTEVGH*KKHIFXXXXXXXXXXXXNWKSRYLSMAGK 3087
+E +A LGV YLG+ + VG +K F +W + LS AGK
Sbjct: 715 EIREEIADMLGVMQAQNFGKYLGLPSFVGRNRKVAFSYIEDKIRQRIDSWNKKLLSQAGK 774
Query: 3088 SILIKAVAQAIPTYLMSCFLVPMQTCQRINSIVSNFWWGHKRDERRIHWSS*QDICKSKL 3267
+L+K+VAQ++P + MS FL+PM C I ++ +WW RD + IHW + +C K
Sbjct: 775 EVLLKSVAQSMPIFSMSVFLLPMTLCTAIERTMNRYWW-RSRDGQGIHWKAWDKLCIPKE 833
Query: 3268 EGILGFGDLHCFNLAMLAKQGWHLVQDERSLLSKVLKAKYYPRVYFLQASIGHNPSYVWK 3447
G LGF +L FNLAML KQ W + SL+S+V KA+YYP F +A +G+NPS+ W+
Sbjct: 834 YGGLGFKELRAFNLAMLGKQAWRFLTQPNSLVSRVYKARYYPTNSFYEACLGNNPSFCWR 893
Query: 3448 SIVASQKILARGIRWNIGDGKEVKVWFDPWIPENPTFKPITQVPSNESRDLMVDDLVSVE 3627
SI+A+Q ++ G+R IG+GK +W PW+ + + IT+ P ++ V
Sbjct: 894 SILAAQDLVCGGVRRRIGNGKSTLIWDHPWLQDVSHPRIITERPPQLAQ-------AKVM 946
Query: 3628 GGCGILISLW-KGLIQRMLNP-----YYRSPFVLVEEKIGWFWHHSKNGSYVVKSRYQ 3783
G W + ++ +LNP + P E + W+W+ G Y VKS Y+
Sbjct: 947 GLMDQQTGTWDQEILTDILNPEDVERVLKIPVSPDYEDL-WYWYGDPKGEYSVKSGYR 1003
Score = 147 bits (370), Expect(3) = e-158
Identities = 79/228 (34%), Positives = 130/228 (57%), Gaps = 1/228 (0%)
Frame = +1
Query: 673 MSCLSWNCRGLRNPLTVRVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLD 852
MS LSWNCRGL NP TVR ++ +++ K P F+FLMETK+ E + FEG+ +D
Sbjct: 1 MSTLSWNCRGLGNPRTVREIEDVVSRKKPDFIFLMETKVNRDHAERLRIKLGFEGLLNVD 60
Query: 853 CDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDKD-WQFLGIYGWPVEGEKYL 1029
N+G GGL L+W++ ++ S +H+ +++ D W+ G YG+ ++
Sbjct: 61 ---NTGLS-GGLALLWRTNETARIMGYSNNHIDVVVSVPGFDKWRMTGFYGFSKRPQRRE 116
Query: 1030 TWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLGFD 1209
+W+L+R+LA+ + W+ +GDFN++LY +EK GG + + F + I++ L L
Sbjct: 117 SWDLIRSLASRSDLPWVIIGDFNDLLYQYEKRGGNPHPDSLLRGFGETIEECGLTQLPMS 176
Query: 1210 GFIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDH 1353
G+ YTW G+ I+ERLD+ L + W ++ + V ++ SDH
Sbjct: 177 GYPYTWEKGKGTPNWIEERLDKVLASQTWRELVADANVQNILTRKSDH 224
Score = 60.5 bits (145), Expect(3) = e-158
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Frame = +2
Query: 1394 KGHIDGGRKKFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERS 1573
+G G R+ FRF+ WL DE C+++V + W GL++ + CG L +W
Sbjct: 235 RGRRGGRRRGFRFQMAWLHDEGCREVVEKS---WGEGRSR-GLQECVTLCGDRLTRWGED 290
Query: 1574 HFGNIG---IQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRART 1744
F G + L+K + +L + ++ ++++ W QRA+
Sbjct: 291 RFHKFGEKILNLRKEQLRLRRCTDPVSLAEF-----RRLDECLARIELQEDTYWRQRAKQ 345
Query: 1745 NWIKDGDKNTAFF 1783
+W+KD D NT F+
Sbjct: 346 HWLKDADLNTKFY 358
>ref|XP_019185987.1| PREDICTED: uncharacterized protein LOC109180732 [Ipomoea nil]
Length = 1155
Score = 382 bits (980), Expect(4) = e-158
Identities = 236/693 (34%), Positives = 350/693 (50%), Gaps = 1/693 (0%)
Frame = +1
Query: 1780 FFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEGPLGAIN 1959
F+H+ A+ R+ +N I +IK++ WVEG + V +Y+ IF++ +
Sbjct: 356 FYHRYASARRKKNLIVRIKDNDDLWVEGD-KMKAVIVDYYTNIFTSNNSSCSYPLFEDFS 414
Query: 1960 LRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDVLDVILN 2139
R+T E N +L RP++ DEV +A+ M P K+ G D M FYQ FWS++ DV I++
Sbjct: 415 PRVTQEHNALLVRPYEADEVKEAVYSMFPDKALGPDGMNPGFYQHFWSVVGDDVTHFIID 474
Query: 2140 ILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKLVLPSLI 2319
LN P +N T IVLIPKK E V + PI+L NVV+KI+ K IANR+K ++ +I
Sbjct: 475 ALNSGALPEGLNDTNIVLIPKKTLPETVADMRPIALSNVVYKIMAKMIANRMKPLMGGII 534
Query: 2320 HHTQSAFVPRRLITDNASWLLKFFIV*RIIKLGNVGLSLLNWIC*KPMIGLNVPFYVVSC 2499
+QS F+P RLITDN + + G G S L K + PF
Sbjct: 535 SKSQSPFIPGRLITDNILVAAEVGHYLHRKQCGRAGWSALKLDMSKAYDRMEWPFLKKMM 594
Query: 2500 FHXXXXXXXXXXXXXXXXXXXXXXXXXGQPGVSFSPSRGLRQGEKLSPYLFIFCAEVFSS 2679
G+ G +P+RGLRQG+ LSPYLFI CAEV S
Sbjct: 595 TVIGFDEHWIRLIMLCVTTVRYSIMINGEVGGCVTPTRGLRQGDPLSPYLFIICAEVLSM 654
Query: 2680 MIRKAKMGGRLHGILVCRRAPEVSHLFFADDSIIFGRASEREIDETKNIISSYERASGQR 2859
++++A+M G +HG V R AP VSHLFFADDS++F +A+ +E K + YE+ SGQ
Sbjct: 655 LLQRAQMDGAIHGCRVARGAPPVSHLFFADDSLLFFKANIQEAAVVKQCLIRYEKLSGQM 714
Query: 2860 INLEKSKISFSKGIHEAQQESLARRLGVQLVDKQKIYLGILTEVGH*KKHIFXXXXXXXX 3039
++ KS I FS+ AQ++ +A LGV+L YLG+ + +G KK +F
Sbjct: 715 VSYNKSSICFSRNTQMAQRQQVAWCLGVELASNFGKYLGLPSFIGRNKKAVFAYIEDKIR 774
Query: 3040 XXXXNWKSRYLSMAGKSILIKAVAQAIPTYLMSCFLVPMQTCQRINSIVSNFWWGHKRDE 3219
+W + LS AGK C I ++ +WWG D
Sbjct: 775 QRIGSWNKKLLSQAGKE------------------------CLSIQRTMNKYWWGTGAD- 809
Query: 3220 RRIHWSS*QDICKSKLEGILGFGDLHCFNLAMLAKQGWHLVQDERSLLSKVLKAKYYPRV 3399
R IHW +C K G LGF DL FNLAML KQ W + + +L++++ KA+YYP
Sbjct: 810 RGIHWKGWDKLCIPKKYGRLGFKDLRAFNLAMLGKQAWRFLTEPTTLVARIYKARYYPTT 869
Query: 3400 YFLQASIGHNPSYVWKSIVASQKILARGIRWNIGDGKEVKVWFDPWIPENPTFKPITQVP 3579
+ A+IG++PS+ W+SI+A+ ++ G+R IG+G++ +W PW+ ++P+ T +P
Sbjct: 870 TSIDATIGNSPSHCWRSIMATHDLVCAGVRRRIGNGRDTLIWGHPWLSDDPSPLVQTHMP 929
Query: 3580 SNESRDLMVDDLVSVEGGCGILISLWKGLIQRMLNPYYRSPFVLVEEKIGWFWHHSKNGS 3759
E R +V L+ + G L I +N P + + W+W G
Sbjct: 930 -EELRQAVVSGLIDQDTGTWDPHILNDLFIPEDVNRISIIP-ISPDYDDTWYWKGDTQGI 987
Query: 3760 YVVKSRY-QVARDMRDEEVVAPSTSQSNMELWR 3855
Y VK+ Y ++ D D+ P + LW+
Sbjct: 988 YTVKNAYRRIMGDYSDD----PGAFDKWVTLWK 1016
Score = 136 bits (343), Expect(4) = e-158
Identities = 81/227 (35%), Positives = 113/227 (49%)
Frame = +1
Query: 673 MSCLSWNCRGLRNPLTVRVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLD 852
MS LSWNC GL NP TVR + L + K P FVFLMETK+ E I +E + +D
Sbjct: 1 MSTLSWNCCGLGNPQTVRHIVDLGSRKKPDFVFLMETKVARIHAERIRVSLGYEWLFYVD 60
Query: 853 CDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDKDWQFLGIYGWPVEGEKYLT 1032
D SG G+ L+WK +L S S +H+ + + K W+ YG+P EK +
Sbjct: 61 NDRMSG----GMALLWKKNNTVQLLSYSKNHVDVGVQIDGKRWRMTCFYGFPKWNEKRDS 116
Query: 1033 WELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLGFDG 1212
W L+ TL W+ GDFN +L+ EK GG + + F + I + L + G
Sbjct: 117 WNLLHTLKGRSTLPWVVAGDFNNLLFQHEKRGGNLYPDSLLRGFWEAIDECGLAQMPMRG 176
Query: 1213 FIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDH 1353
+TW G+ I+ERLD+ L W DI N + ++ SDH
Sbjct: 177 HQFTWEKGKGTQNWIEERLDKVLTTTSWNDINRNAWLENIRTRTSDH 223
Score = 62.8 bits (151), Expect(4) = e-158
Identities = 32/99 (32%), Positives = 50/99 (50%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCEWADF 4042
W L++ PK + FLWR ILPT L + +++DPIC CG ++E I HA+ C+++
Sbjct: 1015 WKLRVTPKWKIFLWRAMSGILPTTDNLIVKRVEVDPICPMCGNTQENIMHALILCDYSKM 1074
Query: 4043 FWKTCSLRLQFSDNRDRHKTHD*LELVERRWIVIVMDCL 4159
W L + + L + + W + VMD L
Sbjct: 1075 VWNISGLPVT-----------NILTNIFQSWFIGVMDSL 1102
Score = 53.9 bits (128), Expect(4) = e-158
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Frame = +2
Query: 1409 GGRKKFRFESMWLQDESCQKMVRQG*-DGWVISMGLIGLKQKIDNCGVELLKW--ERSH- 1576
G + FRFE WL D C++++ DG + GL+G ++ CG L++W ER H
Sbjct: 239 GNPRGFRFEMAWLLDGGCKEVMETAWQDGK--TEGLLGCQRY---CGERLMRWGGERFHK 293
Query: 1577 FGNIGIQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIK 1756
FG QL++ +E + H+A+ +++ W QRA+ +W++
Sbjct: 294 FGKRIDQLRRRQESIRNRRDHAALAEF-----RQIDDQLNLLEAQEDVFWRQRAKQHWLR 348
Query: 1757 DGDKNTAFF 1783
D NT F+
Sbjct: 349 GADANTKFY 357
>ref|XP_019172068.1| PREDICTED: uncharacterized protein LOC109167502 [Ipomoea nil]
Length = 1362
Score = 385 bits (988), Expect(5) = e-155
Identities = 232/676 (34%), Positives = 344/676 (50%), Gaps = 2/676 (0%)
Frame = +1
Query: 1762 GQKYGFFFHKIANGRKTRNSIKKIKNSKGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEG 1941
G FFHK R+ N I K+K+S G WVEG + + YF +F + + M
Sbjct: 362 GDTNSSFFHKSVRRRQQANRITKLKDSNGNWVEGGTALDSLITSYFHDLFCSSLDI-MNA 420
Query: 1942 PLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDV 2121
I + N LSR EV AL M P KSPG D + F+Q FW +I ++
Sbjct: 421 AADCIVPLINASHNASLSRTVTFQEVKDALFDMKPDKSPGPDGLNPGFFQHFWDIIGSEL 480
Query: 2122 LDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKL 2301
+ + P S+N T+IVLIPKK + + + PI+LCN ++K+++K +ANR+K
Sbjct: 481 HHFCSDFFRTGKLPVSLNSTYIVLIPKKTKPDSMGDLRPIALCNTLYKLLSKVLANRIKP 540
Query: 2302 VLPSLIHHTQSAFVPRRLITDNASWLLKFFIV*RIIKLGNVGLSLLNWIC*KPMIGLNVP 2481
+L ++I +QSAFVP RLI+DN + + GN G + K +N
Sbjct: 541 LLANIISESQSAFVPGRLISDNIMLAFELNHYLKRKSQGNTGYVGVKLDMSKAFDRVNWY 600
Query: 2482 FYVVSCFHXXXXXXXXXXXXXXXXXXXXXXXXXGQPGVSFSPSRGLRQGEKLSPYLFIFC 2661
F + G+ + P+RGLRQG+ +SPYLFI
Sbjct: 601 FLLKVMEKMGFSSHFVNLIREMISTVRYTILLEGRAIGTVIPNRGLRQGDPMSPYLFILI 660
Query: 2662 AEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLFFADDSIIFGRASEREIDETKNIISSYE 2841
E +I+K++ G LHGI + RRAP +++LFFADD IF +A+ E KNI+ ++
Sbjct: 661 LESLHLLIQKSQTSGLLHGISIARRAPTITNLFFADDCYIFCKATPSEAAALKNILETFT 720
Query: 2842 RASGQRINLEKSKISFSKGIHEAQQESLARRLGVQLVDKQKIYLGILTEVGH*KKHIFXX 3021
ASGQ +N KS +SFS+ + + +G++ + YLG+ + +G K+ I
Sbjct: 721 SASGQSVNYTKSTLSFSRNTCTNSKTAFCNIMGIREGNLNGSYLGLPSIIGRNKREILGF 780
Query: 3022 XXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAIPTYLMSCFLVPMQTCQRINSIVSNFWW 3201
+W ++LS AGK IL+K V QAIPT+ MS FL+P++ + I +++FWW
Sbjct: 781 IKDKVVGRIKSWTHKFLSRAGKEILLKNVIQAIPTFAMSVFLLPIEMGKDIERTMNSFWW 840
Query: 3202 GHKRDERR-IHWSS*QDICKSKLEGILGFGDLHCFNLAMLAKQGWHLVQDERSLLSKVLK 3378
G D + I W S + + K G +GF + FN+AML KQ W LVQ SLLS+V +
Sbjct: 841 GCTGDRNKGIRWKSWERLSIPKKWGGMGFKRIREFNIAMLGKQAWRLVQQPNSLLSRVYR 900
Query: 3379 AKYYPRVYFLQASIGHNPSYVWKSIVASQKILARGIRWNIGDGKEVKVWFDPWIPENPTF 3558
AKYYP F A +G NPS++W+SI+ +Q L G RW IGDG V +W DPW+P +
Sbjct: 901 AKYYPNSSFFDAQLGSNPSFIWRSILEAQHTLKMGCRWRIGDGNSVNIWTDPWLPNSEFP 960
Query: 3559 KPITQVPSNESRDLMVDDLVSVEGGC-GILISLWKGLIQRMLNPYYRSPFVLVEEKIGWF 3735
+T +P + + + +V+ LI + R L P +KI
Sbjct: 961 FILTSMPDHPLVTSVASLINAVDHSWNATLIGSTFSQVDRDLILSIPLPNSPTNDKI--I 1018
Query: 3736 WHHSKNGSYVVKSRYQ 3783
W H + G + V+S Y+
Sbjct: 1019 WMHDEKGKFTVRSCYK 1034
Score = 107 bits (267), Expect(5) = e-155
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Frame = +1
Query: 880 GGL*LMWKSMFDFKLWSDSLHHLGRMI--NNEDKDWQFLGIYGWPVEGEKYLTWELMRTL 1053
GGL L WK + + S S HH+ ++ N D W+F G YG P E+ +W L++ L
Sbjct: 78 GGLALFWKDGTEVTIRSYSKHHIDAIVSLNAGDSIWRFTGFYGAPDRHERQQSWSLLKRL 137
Query: 1054 ANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLGFDGFIYTWTN 1233
A + W+ +GDFN++L+ EK GG + + F + ++ + L D FDG+ +TW
Sbjct: 138 ATSSTLPWVVMGDFNDVLHPEEKRGGNPQPMRLIRGFREAVETSGLKDYAFDGYQFTWER 197
Query: 1234 GQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLIQ 1371
+ I+ +LDR L W ++F + + + SDH P+ +Q
Sbjct: 198 SKGTPTWIEAKLDRILVTDSWCEMFTSAKACSVTTPKSDHMPLHLQ 243
Score = 53.1 bits (126), Expect(5) = e-155
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Frame = +1
Query: 4153 LFAVLLWNIWDARNKFLFNDKALSHESFFVTATRCMEEYMQSHISSPLLQPRRWKEI--W 4326
L + W +W+ARN+ L+N L+ ++ + E+ + + + + R + W
Sbjct: 1145 LIISICWKLWEARNEKLWNHTILNASFICLSVKNFIFEWPKVNAYT-VSNTRSTDSLTSW 1203
Query: 4327 SHPEVSSFKINSDASIMDG-EGAGLGVVIRDHRGKVITTLTKFVDVEYEINVAEALACRE 4503
+ P K+N DA++ + G G ++RDH G ++ ++ N AEA+A RE
Sbjct: 1204 TRPPHGMLKLNVDAALDSANKRMGFGFILRDHTGALVAARRLPWFSLHKPNEAEAIAVRE 1263
Query: 4504 GILMAKRMQLSQIELETDNLSLYHRLARKQEDLSYFGNLIQE 4629
+ + + + LETD L + + ++ S F L+ +
Sbjct: 1264 ALKWIRGTNIDNVLLETDCLQVVNSISVSHAFNSSFDLLVND 1305
Score = 50.1 bits (118), Expect(5) = e-155
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Frame = +2
Query: 1421 KFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGIQL 1600
++RFE++WL++ C++++ D W S G L ++ CG + W ++ + +L
Sbjct: 255 RYRFENLWLREAHCREVMI---DSWSKSHGQ-DLMNRVGRCGKAIWIWGKNFARDFQRRL 310
Query: 1601 ----KKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDK 1768
++ E ++ DQ L + +Q W QRA+ W+KDGD
Sbjct: 311 DFWRRRMESTKHRRDQ------LGISQFSEAQAQYLRVLQQQSDYWRQRAKQFWLKDGDT 364
Query: 1769 NTAFF 1783
N++FF
Sbjct: 365 NSSFF 369
Score = 49.7 bits (117), Expect(5) = e-155
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCEWADF 4042
W L +PPK++ FLW+ LPT LR R + + C+ C + ET H C A
Sbjct: 1052 WKLNLPPKIKSFLWQLCSSSLPTCDNLRSRHVQIPDSCQICNVVGETDFHLFVICPLARN 1111
Query: 4043 FW 4048
W
Sbjct: 1112 CW 1113
>ref|XP_020874113.1| uncharacterized protein LOC110226516 [Arabidopsis lyrata subsp.
lyrata]
Length = 1569
Score = 262 bits (670), Expect(5) = e-154
Identities = 144/404 (35%), Positives = 212/404 (52%)
Frame = +1
Query: 2581 GQPGVSFSPSRGLRQGEKLSPYLFIFCAEVFSSMIRKAKMGGRLHGILVCRRAPEVSHLF 2760
GQP P RGLRQG+ LSPYLFI C EV + IRKA+ + GI V +P +SHL
Sbjct: 621 GQPRGLIVPERGLRQGDPLSPYLFILCTEVLIANIRKAERDKLITGIKVATASPSISHLL 680
Query: 2761 FADDSIIFGRASEREIDETKNIISSYERASGQRINLEKSKISFSKGIHEAQQESLARRLG 2940
FADDS+ F +A++ + I+ YE SGQ+IN KS I F + + +E + LG
Sbjct: 681 FADDSLFFCKANKDQCGVILGILKQYEAVSGQQINYSKSSIQFGHKVDDGVKEDIKSTLG 740
Query: 2941 VQLVDKQKIYLGILTEVGH*KKHIFXXXXXXXXXXXXNWKSRYLSMAGKSILIKAVAQAI 3120
+ + YLG+ +G K IF W +++LS GK ++IK+VA A+
Sbjct: 741 ISNIGGMGSYLGLPESLGGSKTKIFSFVRDRLQTRINGWSAKFLSKGGKEVMIKSVAAAL 800
Query: 3121 PTYLMSCFLVPMQTCQRINSIVSNFWWGHKRDERRIHWSS*QDICKSKLEGILGFGDLHC 3300
PTY+MSCF +P ++ S V+NFWW R +HW + +C +K EG +GF ++
Sbjct: 801 PTYVMSCFRLPKTITSKLTSAVANFWWSSNGASRGMHWMAWDKLCINKSEGGIGFRNVDD 860
Query: 3301 FNLAMLAKQGWHLVQDERSLLSKVLKAKYYPRVYFLQASIGHNPSYVWKSIVASQKILAR 3480
FN A+LAKQ W L+ SL ++V K +YY + L+ ++PSY W+SI +++ ++ +
Sbjct: 861 FNSALLAKQLWRLITVPDSLFARVFKGRYYRKSNPLENIKSYSPSYGWRSICSARSLVNK 920
Query: 3481 GIRWNIGDGKEVKVWFDPWIPENPTFKPITQVPSNESRDLMVDDLVSVEGGCGILISLWK 3660
G+ +G G + VW DPWIP +P S L V+ L+ + L
Sbjct: 921 GLIKRVGSGNSISVWEDPWIPAQFP-RPAKSNGSINDPSLKVNMLIDSRSNFWDIDLLKA 979
Query: 3661 GLIQRMLNPYYRSPFVLVEEKIGWFWHHSKNGSYVVKSRYQVAR 3792
Q + P ++ WH +K+G Y VKS Y AR
Sbjct: 980 VFDQEDVELISALPVGAPTKEDTLGWHFTKSGKYSVKSGYHTAR 1023
Score = 236 bits (601), Expect(5) = e-154
Identities = 183/587 (31%), Positives = 272/587 (46%), Gaps = 22/587 (3%)
Frame = +1
Query: 673 MSCLSWNCRGLRNPLTVRVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLD 852
M LSWNC+GL N T+ L+ L P F+FL ETK ++ ME + ++ + +D
Sbjct: 1 MKVLSWNCQGLGNKATIGYLRDLWKQHRPDFLFLSETKQSSSFMEKFVGHFGYKNLKTVD 60
Query: 853 ---CDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDKDWQFLGIYGWPVEGEK 1023
C GGL L + + + + S + N + K +YG PV ++
Sbjct: 61 PIGCS-------GGLALFFNNDYHVSVLFASNRVIDIEANYKGKVIYLTFVYGDPVPSKR 113
Query: 1024 YLTWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHKVIQDARLNDLG 1203
WE + + +S W +GDFNE+ EK GG+ + A+ + F+ +IQ+ L +
Sbjct: 114 EQVWERLTRTGLSRDSPWFLIGDFNELTGNHEKRGGKLRHASSFIPFNLMIQNCGLLEFP 173
Query: 1204 FDGFIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVL------ 1365
+ G +W G I+ RLDR L N +W ++F N V +L VASDH PVL
Sbjct: 174 YIGDWLSW-RGWRDKKPIRCRLDRALANEDWHELFYNTFVEYLQMVASDHSPVLATIADK 232
Query: 1366 -------IQWDRIW-SEQGPHXXXXXXXXXXXDVASRRIVSKNGATR---MRWMGDL--Y 1506
++D+ W ++G + + V K R +W +L Y
Sbjct: 233 MPRGKHTFRFDKRWIGKEGLLETIADGWNFDSEPGDGKFVEKLTNCRRAISQWRRELTPY 292
Query: 1507 GINWLKAKN**LWG*AAQMGTIPFWEYWHPIKEV*RKAL*TGSTLSHAHAYSEGEATIRR 1686
G ++ L+ AAQ + +E+ T TL AY + E +
Sbjct: 293 GRQTIEDLKSELY--AAQR------DDRRSREEI------TDLTLRLKEAYRDEELYWHQ 338
Query: 1687 GTSRAPYQTRTNVASKGSNKLD*RRGQKYGFFFHKIANGRKTRNSIKKIKNSKGAWVEGQ 1866
++R+++ G N KY FH + R+ RN I + + G W+
Sbjct: 339 -------KSRSSLMQLGDN------NSKY---FHALTKQRRARNRITGLHDENGTWLTED 382
Query: 1867 *GVTRVFEEYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHP 2046
V + YFK +F+ E L + +TD+ N+ L P EV AL MHP
Sbjct: 383 KEVQNIAVSYFKTLFTTTKPEVFEDALEEVQSLITDQNNDFLIAPATEGEVRAALFMMHP 442
Query: 2047 TKSPGSDSMPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVT 2226
K+PG D M ALF+QK W+ IK+D+L ++ + L D +N T I LIPK + +T
Sbjct: 443 EKAPGPDGMTALFFQKAWATIKVDLLCLVNSFLEDGNFDKRLNTTNICLIPKTERPTRMT 502
Query: 2227 NF*PISLCNVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDN 2367
PISLCNV +KII+K + RLK VLP LI TQSAFV RLI+DN
Sbjct: 503 ELRPISLCNVGYKIISKILCQRLKTVLPKLISETQSAFVEGRLISDN 549
Score = 63.5 bits (153), Expect(5) = e-154
Identities = 26/62 (41%), Positives = 35/62 (56%)
Frame = +2
Query: 3863 WNLKIPPKVQDFLWRCAKEILPTKSELRKRGIDLDPICRRCGLSEETIEHAIRDCEWADF 4042
W ++ PP+++ FLW+ +P LRKRGID D C RCG EET+ H + C A
Sbjct: 1046 WKVQCPPRIRHFLWQILTGCVPVTENLRKRGIDCDTGCARCGALEETVNHTLFQCHPARQ 1105
Query: 4043 FW 4048
W
Sbjct: 1106 VW 1107
Score = 56.2 bits (134), Expect(5) = e-154
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +3
Query: 2370 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLDINESFVNLVMKCV 2549
L+A E+FH ++ N + K A K DM KAYDRVE F+ V+ L E +++ +M C+
Sbjct: 551 LIAQEMFHGLRTNPSCKGKFMAIKTDMSKAYDRVEWIFVEKVLTKLGFCEKWISWIMWCI 610
Query: 2550 SSVFFSTLVNG 2582
++V + L+NG
Sbjct: 611 TTVQYRVLLNG 621
Score = 25.0 bits (53), Expect(5) = e-154
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 4156 FAVLLWNIWDARNKFLFND 4212
F ++W IW ARN+ LF +
Sbjct: 1144 FPWIIWYIWKARNEKLFEN 1162