BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00006672
         (905 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD89596.1| RNA polymerase II, second largest subunit, parti...   491   e-173
dbj|BAF12684.1| Os03g0646800, partial [Oryza sativa Japonica Group]   486   e-170
emb|CAD92662.1| RNA polymerase II, partial [Solanum lycopersicum]     486   e-170
gb|PNX72224.1| DNA-directed RNA polymerase ii subunit rpb2-like ...   483   e-169
emb|CAD91516.1| RNA polymerase II second largest subunit, partia...   490   e-169
emb|CAD92665.1| RNA polymerase II, partial [Erythranthe guttata]      492   e-169
gb|PIN19739.1| DNA-directed RNA polymerase [Handroanthus impetig...   486   e-168
gb|ACN34912.1| unknown [Zea mays]                                     478   e-167
emb|CAD88980.1| DNA-directed RNA polymerase subunit B, partial [...   479   e-167
emb|CAD92461.1| RNA polymerase II, partial [Valeriana officinalis]    474   e-166
gb|AQK64165.1| DNA-directed RNA polymerase II subunit 2 [Zea mays]    478   e-165
gb|PNT39532.1| hypothetical protein POPTR_004G043200v3 [Populus ...   485   e-165
gb|AJS14109.1| RNA polymerase II second largest subunit, partial...   476   e-165
gb|AAS86826.1| RNA polymerase II second largest subunit, partial...   479   e-165
gb|KDO44202.1| hypothetical protein CISIN_1g000996mg [Citrus sin...   488   e-164
gb|AJS14105.1| RNA polymerase II second largest subunit, partial...   473   e-164
gb|KFK41237.1| hypothetical protein AALP_AA2G103600, partial [Ar...   482   e-164
gb|KDP20966.1| hypothetical protein JCGZ_21437 [Jatropha curcas]      485   e-163
dbj|GAU30945.1| hypothetical protein TSUD_143930 [Trifolium subt...   468   e-163
gb|AJS14113.1| RNA polymerase II second largest subunit, partial...   476   e-163

>emb|CAD89596.1| RNA polymerase II, second largest subunit, partial [Myoporum
           insulare]
          Length = 350

 Score =  491 bits (1264), Expect = e-173
 Identities = 238/245 (97%), Positives = 243/245 (99%)
 Frame = -1

Query: 905 YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
           YDKLDDDGLAPPGTRVSGEDVIIGKTTPI P++AQGQAARYTKRDHSTSLRHSETG+VDQ
Sbjct: 66  YDKLDDDGLAPPGTRVSGEDVIIGKTTPINPEDAQGQAARYTKRDHSTSLRHSETGIVDQ 125

Query: 725 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
           VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGI PDII
Sbjct: 126 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDII 185

Query: 545 VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
           VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 186 VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 245

Query: 365 MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 186
           MYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG
Sbjct: 246 MYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 305

Query: 185 EMERD 171
           EMERD
Sbjct: 306 EMERD 310


>dbj|BAF12684.1| Os03g0646800, partial [Oryza sativa Japonica Group]
          Length = 368

 Score =  486 bits (1250), Expect = e-170
 Identities = 234/245 (95%), Positives = 241/245 (98%)
 Frame = -1

Query: 905 YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
           YDKLDDDGLAPPGTRVSGEDVIIGKT+PI  D+AQGQA RYTKRDHSTSLRHSE+GMVDQ
Sbjct: 31  YDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQ 90

Query: 725 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
           VLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 91  VLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDII 150

Query: 545 VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
           VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 151 VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 210

Query: 365 MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 186
           MYNGHTGRKLT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG
Sbjct: 211 MYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 270

Query: 185 EMERD 171
           EMERD
Sbjct: 271 EMERD 275



 Score =  107 bits (267), Expect = 5e-23
 Identities = 49/51 (96%), Positives = 51/51 (100%)
 Frame = -3

Query: 153 CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAP 1
           CE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAP
Sbjct: 302 CEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAP 352


>emb|CAD92662.1| RNA polymerase II, partial [Solanum lycopersicum]
          Length = 396

 Score =  486 bits (1250), Expect = e-170
 Identities = 233/245 (95%), Positives = 243/245 (99%)
 Frame = -1

Query: 905 YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
           YDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHSETGMVDQ
Sbjct: 106 YDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQ 165

Query: 725 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
           VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 166 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDII 225

Query: 545 VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
           VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 226 VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 285

Query: 365 MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 186
           MYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG
Sbjct: 286 MYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 345

Query: 185 EMERD 171
           EMERD
Sbjct: 346 EMERD 350


>gb|PNX72224.1| DNA-directed RNA polymerase ii subunit rpb2-like protein [Trifolium
           pratense]
          Length = 354

 Score =  483 bits (1242), Expect = e-169
 Identities = 232/245 (94%), Positives = 242/245 (98%)
 Frame = -1

Query: 905 YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
           YDKLDDDGLAPPGTRVSGEDVIIGKTTP++ +EAQGQAARY+KRDHS SLRHSETG+VDQ
Sbjct: 50  YDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEAQGQAARYSKRDHSISLRHSETGIVDQ 109

Query: 725 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
           VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 110 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDII 169

Query: 545 VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
           VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 170 VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 229

Query: 365 MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 186
           MYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG
Sbjct: 230 MYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 289

Query: 185 EMERD 171
           EMERD
Sbjct: 290 EMERD 294



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = -3

Query: 96  RGCKNKTDIVQVHIPYACKLLFQELMSMAIAP 1
           RGCKNKTDIVQV IPYACKLLFQELM+MAIAP
Sbjct: 308 RGCKNKTDIVQVFIPYACKLLFQELMAMAIAP 339


>emb|CAD91516.1| RNA polymerase II second largest subunit, partial [Garrya elliptica]
          Length = 576

 Score =  490 bits (1262), Expect = e-169
 Identities = 236/245 (96%), Positives = 243/245 (99%)
 Frame = -1

Query: 905  YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
            YDKLDDDGLAPPGTRVSGEDVIIGKTTPIA D++QGQA+RYTKRDHSTSLRHSETGMVDQ
Sbjct: 332  YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDSQGQASRYTKRDHSTSLRHSETGMVDQ 391

Query: 725  VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
            VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGT+GMTYTQEDMPWTLEGI PDII
Sbjct: 392  VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTIGMTYTQEDMPWTLEGITPDII 451

Query: 545  VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
            VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 452  VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 511

Query: 365  MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 186
            MYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG
Sbjct: 512  MYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 571

Query: 185  EMERD 171
            EMERD
Sbjct: 572  EMERD 576


>emb|CAD92665.1| RNA polymerase II, partial [Erythranthe guttata]
          Length = 629

 Score =  492 bits (1266), Expect = e-169
 Identities = 242/246 (98%), Positives = 243/246 (98%), Gaps = 1/246 (0%)
 Frame = -1

Query: 905  YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQA-ARYTKRDHSTSLRHSETGMVD 729
            YDKLDDDGLAPPGTRVSGEDVIIGKTTPI PDEAQGQA ARYTKRDHSTSLRHSETGMVD
Sbjct: 337  YDKLDDDGLAPPGTRVSGEDVIIGKTTPITPDEAQGQANARYTKRDHSTSLRHSETGMVD 396

Query: 728  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDI 549
            QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGI PDI
Sbjct: 397  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGINPDI 456

Query: 548  IVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 369
            IVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E
Sbjct: 457  IVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYE 516

Query: 368  TMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 189
            TMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 517  TMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 576

Query: 188  GEMERD 171
            GEMERD
Sbjct: 577  GEMERD 582


>gb|PIN19739.1| DNA-directed RNA polymerase [Handroanthus impetiginosus]
          Length = 515

 Score =  486 bits (1251), Expect = e-168
 Identities = 233/245 (95%), Positives = 242/245 (98%)
 Frame = -1

Query: 905 YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
           YDKLDDDGLAPPGTRV+GEDVIIGKTTPI+PD+ QGQAARYTKRDHSTSLRHSE G+VDQ
Sbjct: 176 YDKLDDDGLAPPGTRVAGEDVIIGKTTPISPDDVQGQAARYTKRDHSTSLRHSENGIVDQ 235

Query: 725 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
           VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 236 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDII 295

Query: 545 VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
           VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 296 VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 355

Query: 365 MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 186
           MYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG
Sbjct: 356 MYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 415

Query: 185 EMERD 171
           EMERD
Sbjct: 416 EMERD 420



 Score =  106 bits (264), Expect = 5e-22
 Identities = 49/51 (96%), Positives = 51/51 (100%)
 Frame = -3

Query: 153 CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAP 1
           CERCGLIAIANLKKNSFECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAP
Sbjct: 447 CERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAP 497


>gb|ACN34912.1| unknown [Zea mays]
          Length = 362

 Score =  478 bits (1230), Expect = e-167
 Identities = 230/245 (93%), Positives = 240/245 (97%)
 Frame = -1

Query: 905 YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
           YDKLDDDGLAPPGTRVSGEDVIIGKT+PI  D+AQGQA+RY+KRDHST+LRHSE+GMVDQ
Sbjct: 25  YDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQASRYSKRDHSTALRHSESGMVDQ 84

Query: 725 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
           VLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 85  VLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDII 144

Query: 545 VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
           VNPHAIPSRMTIGQLIEC+MGKVAA MGKEGDATPFTDVTVDNISKALHKC YQMRGFET
Sbjct: 145 VNPHAIPSRMTIGQLIECIMGKVAAQMGKEGDATPFTDVTVDNISKALHKCNYQMRGFET 204

Query: 365 MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 186
           MYNGHTGRKLT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG
Sbjct: 205 MYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 264

Query: 185 EMERD 171
           EMERD
Sbjct: 265 EMERD 269



 Score =  107 bits (267), Expect = 5e-23
 Identities = 49/51 (96%), Positives = 51/51 (100%)
 Frame = -3

Query: 153 CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAP 1
           CE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAP
Sbjct: 296 CEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAP 346


>emb|CAD88980.1| DNA-directed RNA polymerase subunit B, partial [Vicia sativa]
          Length = 401

 Score =  479 bits (1233), Expect = e-167
 Identities = 230/245 (93%), Positives = 241/245 (98%)
 Frame = -1

Query: 905 YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
           Y+KLDDDGLAPPGTRVSGEDVIIGKTTP++ +EAQGQAARY+KRDHS SLRHSE G+VDQ
Sbjct: 118 YEKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEAQGQAARYSKRDHSISLRHSENGIVDQ 177

Query: 725 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
           VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 178 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDII 237

Query: 545 VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
           VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 238 VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 297

Query: 365 MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 186
           MYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG
Sbjct: 298 MYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 357

Query: 185 EMERD 171
           EMERD
Sbjct: 358 EMERD 362


>emb|CAD92461.1| RNA polymerase II, partial [Valeriana officinalis]
          Length = 364

 Score =  474 bits (1220), Expect = e-166
 Identities = 229/239 (95%), Positives = 236/239 (98%)
 Frame = -1

Query: 905 YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
           YDKLDDDGLAP GTRVSGEDVIIGKTTPIA D+AQGQA+RYT+RDHSTSLRHSETGMVDQ
Sbjct: 126 YDKLDDDGLAPAGTRVSGEDVIIGKTTPIAQDDAQGQASRYTRRDHSTSLRHSETGMVDQ 185

Query: 725 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
           VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 186 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDII 245

Query: 545 VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
           VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 246 VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 305

Query: 365 MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 189
           MYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 306 MYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 364


>gb|AQK64165.1| DNA-directed RNA polymerase II subunit 2 [Zea mays]
          Length = 513

 Score =  478 bits (1230), Expect = e-165
 Identities = 230/245 (93%), Positives = 240/245 (97%)
 Frame = -1

Query: 905 YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
           YDKLDDDGLAPPGTRVSGEDVIIGKT+PI  D+AQGQA+RY+KRDHST+LRHSE+GMVDQ
Sbjct: 176 YDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQASRYSKRDHSTALRHSESGMVDQ 235

Query: 725 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
           VLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 236 VLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDII 295

Query: 545 VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
           VNPHAIPSRMTIGQLIEC+MGKVAA MGKEGDATPFTDVTVDNISKALHKC YQMRGFET
Sbjct: 296 VNPHAIPSRMTIGQLIECIMGKVAAQMGKEGDATPFTDVTVDNISKALHKCNYQMRGFET 355

Query: 365 MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 186
           MYNGHTGRKLT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG
Sbjct: 356 MYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 415

Query: 185 EMERD 171
           EMERD
Sbjct: 416 EMERD 420



 Score =  107 bits (267), Expect = 2e-22
 Identities = 49/51 (96%), Positives = 51/51 (100%)
 Frame = -3

Query: 153 CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAP 1
           CE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAP
Sbjct: 447 CEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAP 497


>gb|PNT39532.1| hypothetical protein POPTR_004G043200v3 [Populus trichocarpa]
          Length = 726

 Score =  485 bits (1249), Expect = e-165
 Identities = 234/245 (95%), Positives = 242/245 (98%)
 Frame = -1

Query: 905  YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
            YDKLDDDGLAPPGTRVSGEDVIIGKTTPIA +EAQGQ+ARYT+RDHS SLRHSETGMVDQ
Sbjct: 387  YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGMVDQ 446

Query: 725  VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
            VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 447  VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDII 506

Query: 545  VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
            VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 507  VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 566

Query: 365  MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 186
            MYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG
Sbjct: 567  MYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 626

Query: 185  EMERD 171
            EMERD
Sbjct: 627  EMERD 631



 Score =  108 bits (270), Expect = 1e-22
 Identities = 50/51 (98%), Positives = 51/51 (100%)
 Frame = -3

Query: 153 CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAP 1
           CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAP
Sbjct: 658 CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAP 708


>gb|AJS14109.1| RNA polymerase II second largest subunit, partial [Heisteria
           concinna]
          Length = 485

 Score =  476 bits (1226), Expect = e-165
 Identities = 230/239 (96%), Positives = 237/239 (99%)
 Frame = -1

Query: 905 YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
           YDKLDDDGLAPPGTRVSGEDVIIGKTTPIA DEAQGQAARYT+RDHSTSLRHSETG+VDQ
Sbjct: 247 YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDEAQGQAARYTRRDHSTSLRHSETGIVDQ 306

Query: 725 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
           VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 307 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDII 366

Query: 545 VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
           VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 367 VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 426

Query: 365 MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 189
           MYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 427 MYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 485


>gb|AAS86826.1| RNA polymerase II second largest subunit, partial [Antirrhinum majus]
          Length = 575

 Score =  479 bits (1233), Expect = e-165
 Identities = 231/239 (96%), Positives = 237/239 (99%)
 Frame = -1

Query: 905  YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
            YDKLDDDGLAPPGTR SGEDVIIGKTTPI+PD+AQGQAARYTKRDHSTSLRHSETGMVDQ
Sbjct: 337  YDKLDDDGLAPPGTRCSGEDVIIGKTTPISPDDAQGQAARYTKRDHSTSLRHSETGMVDQ 396

Query: 725  VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
            VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 397  VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGISPDII 456

Query: 545  VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
            VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 457  VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 516

Query: 365  MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 189
            MYNGHTGR+L+SMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 517  MYNGHTGRRLSSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 575


>gb|KDO44202.1| hypothetical protein CISIN_1g000996mg [Citrus sinensis]
          Length = 842

 Score =  488 bits (1256), Expect = e-164
 Identities = 237/253 (93%), Positives = 244/253 (96%)
 Frame = -1

Query: 905  YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
            YDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ DEAQGQA+RYT+RDHS SLRHSETGMVDQ
Sbjct: 502  YDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQASRYTRRDHSISLRHSETGMVDQ 561

Query: 725  VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
            VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 562  VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDII 621

Query: 545  VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
            VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 622  VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 681

Query: 365  MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 186
            MYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG
Sbjct: 682  MYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 741

Query: 185  EMERDXXXXXXAS 147
            EMERD      AS
Sbjct: 742  EMERDCMIAHGAS 754



 Score =  106 bits (265), Expect = 6e-22
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = -3

Query: 153 CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAP 1
           CE CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAP
Sbjct: 773 CEHCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAP 823


>gb|AJS14105.1| RNA polymerase II second largest subunit, partial [Diogoa zenkeri]
          Length = 436

 Score =  473 bits (1216), Expect = e-164
 Identities = 227/239 (94%), Positives = 237/239 (99%)
 Frame = -1

Query: 905 YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
           YDKLDDDGLAPPGTRVSGEDVIIGKT+P+A DE+QGQA+RY+KRDHSTSLRHSETG+VDQ
Sbjct: 198 YDKLDDDGLAPPGTRVSGEDVIIGKTSPMAQDESQGQASRYSKRDHSTSLRHSETGIVDQ 257

Query: 725 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
           VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 258 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDII 317

Query: 545 VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
           VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 318 VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 377

Query: 365 MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 189
           MYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 378 MYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 436


>gb|KFK41237.1| hypothetical protein AALP_AA2G103600, partial [Arabis alpina]
          Length = 718

 Score =  482 bits (1241), Expect = e-164
 Identities = 232/245 (94%), Positives = 240/245 (97%)
 Frame = -1

Query: 905  YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
            Y+KLDDDGLAPPGTRVSGEDVIIGKTTPI+ DEAQGQA+RYT+RDHS SLRHSETGMVDQ
Sbjct: 383  YEKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQASRYTRRDHSISLRHSETGMVDQ 442

Query: 725  VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
            VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EG+ PDII
Sbjct: 443  VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGVTPDII 502

Query: 545  VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
            VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 
Sbjct: 503  VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFER 562

Query: 365  MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 186
            MYNGHTGR LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG
Sbjct: 563  MYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 622

Query: 185  EMERD 171
            EMERD
Sbjct: 623  EMERD 627



 Score =  106 bits (265), Expect = 6e-22
 Identities = 50/51 (98%), Positives = 50/51 (98%)
 Frame = -3

Query: 153 CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAP 1
           CE CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAP
Sbjct: 654 CEVCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAP 704


>gb|KDP20966.1| hypothetical protein JCGZ_21437 [Jatropha curcas]
          Length = 841

 Score =  485 bits (1249), Expect = e-163
 Identities = 234/245 (95%), Positives = 242/245 (98%)
 Frame = -1

Query: 905  YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
            YDKLDDDGLAPPGTRVSGEDVIIGKTTPIA +EAQGQ+ARYT+RDHS SLRHSETG+VDQ
Sbjct: 502  YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQ 561

Query: 725  VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
            VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 562  VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDII 621

Query: 545  VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
            VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 622  VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 681

Query: 365  MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 186
            MYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG
Sbjct: 682  MYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 741

Query: 185  EMERD 171
            EMERD
Sbjct: 742  EMERD 746



 Score =  108 bits (270), Expect = 1e-22
 Identities = 50/51 (98%), Positives = 51/51 (100%)
 Frame = -3

Query: 153 CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAP 1
           CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAP
Sbjct: 773 CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAP 823


>dbj|GAU30945.1| hypothetical protein TSUD_143930 [Trifolium subterraneum]
          Length = 364

 Score =  468 bits (1205), Expect = e-163
 Identities = 223/245 (91%), Positives = 238/245 (97%)
 Frame = -1

Query: 905 YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
           YDKLDDDGLAPPGTRVS EDVIIGKT+P++ ++AQGQAARY++RDHSTSLRHSETGMVDQ
Sbjct: 25  YDKLDDDGLAPPGTRVSAEDVIIGKTSPLSQEDAQGQAARYSRRDHSTSLRHSETGMVDQ 84

Query: 725 VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
           VLLTTN DGL+FVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 85  VLLTTNTDGLKFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDII 144

Query: 545 VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
           VNPHAIPSRMTIGQLIEC+MGK AA MGKEGDATPFTDVTVDNISK+LHKCGYQMRGFET
Sbjct: 145 VNPHAIPSRMTIGQLIECIMGKFAAQMGKEGDATPFTDVTVDNISKSLHKCGYQMRGFET 204

Query: 365 MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFG 186
           MYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGP+QILTRQPA GRSRDGGLRFG
Sbjct: 205 MYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPMQILTRQPAHGRSRDGGLRFG 264

Query: 185 EMERD 171
           EMERD
Sbjct: 265 EMERD 269



 Score = 97.4 bits (241), Expect = 2e-19
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = -3

Query: 153 CERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAP 1
           CE CG +AIANLK  SFECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAP
Sbjct: 296 CEHCGFVAIANLKYTSFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAP 346


>gb|AJS14113.1| RNA polymerase II second largest subunit, partial [Maburea trinervis]
          Length = 569

 Score =  476 bits (1224), Expect = e-163
 Identities = 229/239 (95%), Positives = 237/239 (99%)
 Frame = -1

Query: 905  YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGMVDQ 726
            YDKLDDDGLAPPGTRVSGEDVIIGKTTPIA DE+QGQA+RYT+RDHSTSLRHSETG+VDQ
Sbjct: 331  YDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDESQGQASRYTRRDHSTSLRHSETGIVDQ 390

Query: 725  VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDII 546
            VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDII
Sbjct: 391  VLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDII 450

Query: 545  VNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 366
            VNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET
Sbjct: 451  VNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFET 510

Query: 365  MYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 189
            MYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 511  MYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 569