BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00006264
         (850 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN02731.1| Poly(A)-specific exoribonuclease PARN [Handroanth...   242   2e-70
ref|XP_011093738.1| CRM-domain containing factor CFM3, chloropla...   238   7e-69
ref|XP_012846341.1| PREDICTED: chloroplastic group IIA intron sp...   177   8e-47
ref|XP_022888243.1| CRM-domain containing factor CFM3, chloropla...   162   1e-42
ref|XP_022888241.1| CRM-domain containing factor CFM3, chloropla...   162   2e-42
ref|XP_022888242.1| CRM-domain containing factor CFM3, chloropla...   162   3e-42
ref|XP_022888240.1| CRM-domain containing factor CFM3, chloropla...   162   2e-41
ref|XP_022888239.1| CRM-domain containing factor CFM3, chloropla...   162   2e-41
ref|XP_019249130.1| PREDICTED: CRM-domain containing factor CFM3...   106   5e-22
gb|OIS99894.1| crm-domain containing factor cfm3, chloroplasticm...   106   6e-22
ref|XP_016479483.1| PREDICTED: CRM-domain containing factor CFM3...   103   6e-21
ref|XP_018626791.1| PREDICTED: CRM-domain containing factor CFM3...   103   6e-21
ref|XP_009602352.1| PREDICTED: CRM-domain containing factor CFM3...   103   6e-21
ref|XP_018626790.1| PREDICTED: CRM-domain containing factor CFM3...   103   6e-21
ref|XP_016479482.1| PREDICTED: CRM-domain containing factor CFM3...   103   6e-21
ref|XP_016477563.1| PREDICTED: CRM-domain containing factor CFM3...   101   2e-20
ref|XP_009799178.1| PREDICTED: chloroplastic group IIA intron sp...   101   3e-20
gb|OVA05797.1| RNA-binding [Macleaya cordata]                          91   7e-17
ref|XP_022147610.1| CRM-domain containing factor CFM3, chloropla...    85   9e-15
ref|XP_019173427.1| PREDICTED: CRM-domain containing factor CFM3...    82   7e-14

>gb|PIN02731.1| Poly(A)-specific exoribonuclease PARN [Handroanthus impetiginosus]
          Length = 864

 Score =  242 bits (618), Expect = 2e-70
 Identities = 135/250 (54%), Positives = 162/250 (64%), Gaps = 10/250 (4%)
 Frame = +1

Query: 130 KFHPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLK 309
           KFH +THSL G+G RK +ISC  QTV++D E Q+ TNL KK RKPRPSFLEQVQNKWS+K
Sbjct: 27  KFHSQTHSLHGYGIRKLRISCSSQTVQLDNEAQNKTNLVKK-RKPRPSFLEQVQNKWSVK 85

Query: 310 TPSLRQNFPWQEQENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTLA 489
           TPSLR+NFPWQEQ +GDTN++FQ Q+                           K KSTLA
Sbjct: 86  TPSLRENFPWQEQGSGDTNEEFQIQSEKESEPNSSVSEPVSSP---------VKTKSTLA 136

Query: 490 PWVHGNEPRKKVFNSKGSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVK---------KK 642
           PWVHGN+PRK +F+S+G+ K QE VHQ +   +      + Q S+DLVK         +K
Sbjct: 137 PWVHGNKPRKNLFSSEGTRKFQENVHQKDQALDGFHEHFLDQVSEDLVKGVVLDGTSEEK 196

Query: 643 IGEFDEIPIGLPEKNENLGVDKSKN-VTSMEDLSISYRVASSVKCSAGADDLKRLPWERK 819
            GEFD+IPIGLPEKN+ LG D+ KN VT ME  S  Y      KCSA A+D KRLPWE K
Sbjct: 197 CGEFDKIPIGLPEKNDLLGNDEGKNDVTFMEGSSTIYPEVIGKKCSADANDSKRLPWEGK 256

Query: 820 INEEFVKENK 849
           I+  FVKE K
Sbjct: 257 IDGGFVKEEK 266


>ref|XP_011093738.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
           [Sesamum indicum]
          Length = 887

 Score =  238 bits (608), Expect = 7e-69
 Identities = 130/253 (51%), Positives = 162/253 (64%), Gaps = 17/253 (6%)
 Frame = +1

Query: 142 KTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPSL 321
           +T SL+ F  RK +ISCCQ+TV+++ ET+      KKKRKPRPSFLEQVQ+KWS++TP L
Sbjct: 31  QTRSLQSFRPRKLRISCCQKTVQLENETKQKAYPVKKKRKPRPSFLEQVQSKWSIRTPPL 90

Query: 322 RQNFPWQEQENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTLAPWVH 501
           R+NFPWQE+E+G TNQ+F+AQ                              KS LAPWVH
Sbjct: 91  RENFPWQEEESGGTNQEFEAQRSVFSRDVSSEEESEKSSCVSEPERSQRINKSILAPWVH 150

Query: 502 GNEPRKKVFNSKGSIKSQEKVHQ--------TEHLQNEEPMVSVIQGSDDLVK------- 636
           GN  RK VFNS+GS   QE VH          EH  NE+P+VSV+ G +DLVK       
Sbjct: 151 GN-GRKNVFNSEGSRNIQENVHPKDDGLHGIQEHWPNEDPLVSVVVGYEDLVKEVTENGR 209

Query: 637 --KKIGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVASSVKCSAGADDLKRLPW 810
             +++GEFD+IPIGL EKNE LG ++S++  +MEDLS      SS KCS  A+DL RLPW
Sbjct: 210 SEEEVGEFDDIPIGLSEKNEILGNEESEDFAAMEDLSTISLEISSEKCSNDANDLMRLPW 269

Query: 811 ERKINEEFVKENK 849
           ERKI+EEFVKE K
Sbjct: 270 ERKIDEEFVKEEK 282


>ref|XP_012846341.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Erythranthe guttata]
 gb|EYU29891.1| hypothetical protein MIMGU_mgv1a001353mg [Erythranthe guttata]
          Length = 835

 Score =  177 bits (449), Expect = 8e-47
 Identities = 106/242 (43%), Positives = 136/242 (56%), Gaps = 2/242 (0%)
 Frame = +1

Query: 130 KFHPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLK 309
           KF+P+T SL      +  I+CCQQTV++D ET H   L KKKRKPRPSF+EQ+QNKWSLK
Sbjct: 28  KFNPRTRSLNS----RKIINCCQQTVQLDNETLHTITLVKKKRKPRPSFVEQIQNKWSLK 83

Query: 310 TPSLRQNFPWQEQENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXH--TKIKST 483
           TPSLR+NFPWQE++     ++F+AQT                             K KS 
Sbjct: 84  TPSLRENFPWQEEQ-----EEFRAQTTPFSQNVSSAKEIEVSVSVSERVVVTHVKKPKSI 138

Query: 484 LAPWVHGNEPRKKVFNSKGSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVKKKIGEFDEI 663
           LAPWVHGNE R+++  S+GS K+QE V   +        V    G  D   +K  EFDE 
Sbjct: 139 LAPWVHGNESRRELPVSEGSTKNQENVRTEKEFLVSPVRVLAEYGKSD---EKFIEFDET 195

Query: 664 PIGLPEKNENLGVDKSKNVTSMEDLSISYRVASSVKCSAGADDLKRLPWERKINEEFVKE 843
           PI L EKN             +E+ + + R A+ +K S   D L RLPWERK +EEFVK+
Sbjct: 196 PIRLTEKN-----------AVVENSATTDRTATRIKPSVNGDGLNRLPWERKNDEEFVKK 244

Query: 844 NK 849
           +K
Sbjct: 245 DK 246


>ref|XP_022888243.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
           isoform X3 [Olea europaea var. sylvestris]
          Length = 523

 Score =  162 bits (410), Expect = 1e-42
 Identities = 100/258 (38%), Positives = 137/258 (53%), Gaps = 19/258 (7%)
 Frame = +1

Query: 133 FHPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKT 312
           FH + H    F  +K KISC +         QH TN  KKKRKPRPSF+E++Q+KWSLK 
Sbjct: 27  FHSQPHCSNRFRGQKLKISCTKSV-------QHETNPVKKKRKPRPSFIEKIQDKWSLKI 79

Query: 313 PSLRQNFPWQE--QENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTL 486
           PSLR+ FPW+E  QE+ D+ Q ++                             ++ KS L
Sbjct: 80  PSLREKFPWEEHKQESDDSIQDYEEHLLPLSEGVVTVTVSEDNTSGDSSASSSSRNKSIL 139

Query: 487 APWVHGNEPRKKVFNSKGSIKSQEKVHQ--------TEHLQNEEPMVSVIQGSDDLVK-- 636
           APWVHGN+PRK + +S+ + K QE+ +         +EH +N+E   SV++ S DL+K  
Sbjct: 140 APWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDLIKGV 199

Query: 637 -------KKIGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVASSVKCSAGADDL 795
                  +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S    D 
Sbjct: 200 KLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDDVSDS 259

Query: 796 KRLPWERKINEEFVKENK 849
            RLPW+R  NE+ VKE K
Sbjct: 260 MRLPWQRGTNEDPVKEEK 277


>ref|XP_022888241.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
           isoform X1 [Olea europaea var. sylvestris]
          Length = 558

 Score =  162 bits (410), Expect = 2e-42
 Identities = 100/258 (38%), Positives = 137/258 (53%), Gaps = 19/258 (7%)
 Frame = +1

Query: 133 FHPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKT 312
           FH + H    F  +K KISC +         QH TN  KKKRKPRPSF+E++Q+KWSLK 
Sbjct: 27  FHSQPHCSNRFRGQKLKISCTKSV-------QHETNPVKKKRKPRPSFIEKIQDKWSLKI 79

Query: 313 PSLRQNFPWQE--QENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTL 486
           PSLR+ FPW+E  QE+ D+ Q ++                             ++ KS L
Sbjct: 80  PSLREKFPWEEHKQESDDSIQDYEEHLLPLSEGVVTVTVSEDNTSGDSSASSSSRNKSIL 139

Query: 487 APWVHGNEPRKKVFNSKGSIKSQEKVHQ--------TEHLQNEEPMVSVIQGSDDLVK-- 636
           APWVHGN+PRK + +S+ + K QE+ +         +EH +N+E   SV++ S DL+K  
Sbjct: 140 APWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDLIKGV 199

Query: 637 -------KKIGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVASSVKCSAGADDL 795
                  +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S    D 
Sbjct: 200 KLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDDVSDS 259

Query: 796 KRLPWERKINEEFVKENK 849
            RLPW+R  NE+ VKE K
Sbjct: 260 MRLPWQRGTNEDPVKEEK 277


>ref|XP_022888242.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
           isoform X2 [Olea europaea var. sylvestris]
          Length = 558

 Score =  162 bits (409), Expect = 3e-42
 Identities = 100/258 (38%), Positives = 137/258 (53%), Gaps = 19/258 (7%)
 Frame = +1

Query: 133 FHPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKT 312
           FH + H    F  +K KISC +         QH TN  KKKRKPRPSF+E++Q+KWSLK 
Sbjct: 27  FHSQPHFSNRFRGQKLKISCTKSV-------QHETNPVKKKRKPRPSFIEKIQDKWSLKI 79

Query: 313 PSLRQNFPWQE--QENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTL 486
           PSLR+ FPW+E  QE+ D+ Q ++                             ++ KS L
Sbjct: 80  PSLREKFPWEEHKQESDDSIQDYEEHLLPLSEGVVTVTVSEDNTSGDSSASSSSRNKSIL 139

Query: 487 APWVHGNEPRKKVFNSKGSIKSQEKVHQ--------TEHLQNEEPMVSVIQGSDDLVK-- 636
           APWVHGN+PRK + +S+ + K QE+ +         +EH +N+E   SV++ S DL+K  
Sbjct: 140 APWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDLIKGV 199

Query: 637 -------KKIGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVASSVKCSAGADDL 795
                  +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S    D 
Sbjct: 200 KLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDDVSDS 259

Query: 796 KRLPWERKINEEFVKENK 849
            RLPW+R  NE+ VKE K
Sbjct: 260 MRLPWQRGTNEDPVKEEK 277


>ref|XP_022888240.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
           [Olea europaea var. sylvestris]
          Length = 891

 Score =  162 bits (410), Expect = 2e-41
 Identities = 100/258 (38%), Positives = 137/258 (53%), Gaps = 19/258 (7%)
 Frame = +1

Query: 133 FHPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKT 312
           FH + H    F  +K KISC +         QH TN  KKKRKPRPSF+E++Q+KWSLK 
Sbjct: 27  FHSQPHCSNRFRGQKLKISCTKSV-------QHETNPVKKKRKPRPSFIEKIQDKWSLKI 79

Query: 313 PSLRQNFPWQE--QENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTL 486
           PSLR+ FPW+E  QE+ D+ Q ++                             ++ KS L
Sbjct: 80  PSLREKFPWEEHKQESDDSIQDYEEHLLPLSEGVVTVTVSEDNTSGDSSASSSSRNKSIL 139

Query: 487 APWVHGNEPRKKVFNSKGSIKSQEKVHQ--------TEHLQNEEPMVSVIQGSDDLVK-- 636
           APWVHGN+PRK + +S+ + K QE+ +         +EH +N+E   SV++ S DL+K  
Sbjct: 140 APWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDLIKGV 199

Query: 637 -------KKIGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVASSVKCSAGADDL 795
                  +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S    D 
Sbjct: 200 KLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDDVSDS 259

Query: 796 KRLPWERKINEEFVKENK 849
            RLPW+R  NE+ VKE K
Sbjct: 260 MRLPWQRGTNEDPVKEEK 277


>ref|XP_022888239.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
           [Olea europaea var. sylvestris]
          Length = 891

 Score =  162 bits (410), Expect = 2e-41
 Identities = 100/258 (38%), Positives = 137/258 (53%), Gaps = 19/258 (7%)
 Frame = +1

Query: 133 FHPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKT 312
           FH + H    F  +K KISC +         QH TN  KKKRKPRPSF+E++Q+KWSLK 
Sbjct: 27  FHSQPHCSNRFRGQKLKISCTKSV-------QHETNPVKKKRKPRPSFIEKIQDKWSLKI 79

Query: 313 PSLRQNFPWQE--QENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTL 486
           PSLR+ FPW+E  QE+ D+ Q ++                             ++ KS L
Sbjct: 80  PSLREKFPWEEHKQESDDSIQDYEEHLLPLSEGVVTVTVSEDNTSGDSSASSSSRNKSIL 139

Query: 487 APWVHGNEPRKKVFNSKGSIKSQEKVHQ--------TEHLQNEEPMVSVIQGSDDLVK-- 636
           APWVHGN+PRK + +S+ + K QE+ +         +EH +N+E   SV++ S DL+K  
Sbjct: 140 APWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDLIKGV 199

Query: 637 -------KKIGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVASSVKCSAGADDL 795
                  +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S    D 
Sbjct: 200 KLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDDVSDS 259

Query: 796 KRLPWERKINEEFVKENK 849
            RLPW+R  NE+ VKE K
Sbjct: 260 MRLPWQRGTNEDPVKEEK 277


>ref|XP_019249130.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial [Nicotiana attenuata]
          Length = 832

 Score =  106 bits (264), Expect = 5e-22
 Identities = 78/232 (33%), Positives = 108/232 (46%), Gaps = 7/232 (3%)
 Frame = +1

Query: 139 PKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPS 318
           PK  SL    A+  +I C  QT+  D E Q  TN  KKK+KPRPSFLEQVQNKWS+KT S
Sbjct: 33  PKIQSLHNLRAKNIRIYCSSQTIHSDKENQ--TNQTKKKQKPRPSFLEQVQNKWSVKTTS 90

Query: 319 LRQNFPWQE------QENGDTNQQFQ-AQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIK 477
           LR+ FPWQE      +E  + + QF  A+T                          ++IK
Sbjct: 91  LREKFPWQELNSVSIEEVAEQDLQFSVAKTEENPVVNDSVSSG-------------SRIK 137

Query: 478 STLAPWVHGNEPRKKVFNSKGSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVKKKIGEFD 657
            +LAPWVHGN+P+          KSQ    +  + +N     ++I  S +  +  + E  
Sbjct: 138 VSLAPWVHGNQPK----------KSQLVSFEARNFENNADESNIIGKSLEHCENNVSEEL 187

Query: 658 EIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVASSVKCSAGADDLKRLPWE 813
           ++  G  EK+  L            +  + +R  SS K S       RLPW+
Sbjct: 188 DVKSGKDEKDIKL---------ESRETMVLHRYESSSKSSV------RLPWQ 224


>gb|OIS99894.1| crm-domain containing factor cfm3, chloroplasticmitochondrial
           [Nicotiana attenuata]
          Length = 1166

 Score =  106 bits (264), Expect = 6e-22
 Identities = 78/232 (33%), Positives = 108/232 (46%), Gaps = 7/232 (3%)
 Frame = +1

Query: 139 PKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPS 318
           PK  SL    A+  +I C  QT+  D E Q  TN  KKK+KPRPSFLEQVQNKWS+KT S
Sbjct: 367 PKIQSLHNLRAKNIRIYCSSQTIHSDKENQ--TNQTKKKQKPRPSFLEQVQNKWSVKTTS 424

Query: 319 LRQNFPWQE------QENGDTNQQFQ-AQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIK 477
           LR+ FPWQE      +E  + + QF  A+T                          ++IK
Sbjct: 425 LREKFPWQELNSVSIEEVAEQDLQFSVAKTEENPVVNDSVSSG-------------SRIK 471

Query: 478 STLAPWVHGNEPRKKVFNSKGSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVKKKIGEFD 657
            +LAPWVHGN+P+          KSQ    +  + +N     ++I  S +  +  + E  
Sbjct: 472 VSLAPWVHGNQPK----------KSQLVSFEARNFENNADESNIIGKSLEHCENNVSEEL 521

Query: 658 EIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVASSVKCSAGADDLKRLPWE 813
           ++  G  EK+  L            +  + +R  SS K S       RLPW+
Sbjct: 522 DVKSGKDEKDIKL---------ESRETMVLHRYESSSKSSV------RLPWQ 558


>ref|XP_016479483.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial-like isoform X2 [Nicotiana
           tabacum]
          Length = 830

 Score =  103 bits (256), Expect = 6e-21
 Identities = 61/139 (43%), Positives = 77/139 (55%), Gaps = 7/139 (5%)
 Frame = +1

Query: 139 PKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPS 318
           PK  SL  F A+  +I C  QT+  D E Q  TN +KKK+KPRPSFLEQVQNKWS+KT S
Sbjct: 33  PKIQSLHNFRAKNIRIYCSSQTIHSDKENQ--TNQSKKKQKPRPSFLEQVQNKWSVKTTS 90

Query: 319 LRQNFPWQE------QENGDTNQQFQ-AQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIK 477
           LR+ FPWQE      +E  + + QF  A+T                          ++IK
Sbjct: 91  LREKFPWQELNSVSIEEVAEQDLQFSVAKTEENPVVNESVSSG-------------SRIK 137

Query: 478 STLAPWVHGNEPRKKVFNS 534
             LAPWVHGN+P+K   +S
Sbjct: 138 VNLAPWVHGNQPKKSQLDS 156


>ref|XP_018626791.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial isoform X3 [Nicotiana
           tomentosiformis]
          Length = 830

 Score =  103 bits (256), Expect = 6e-21
 Identities = 61/139 (43%), Positives = 77/139 (55%), Gaps = 7/139 (5%)
 Frame = +1

Query: 139 PKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPS 318
           PK  SL  F A+  +I C  QT+  D E Q  TN +KKK+KPRPSFLEQVQNKWS+KT S
Sbjct: 33  PKIQSLHNFRAKNIRIYCSSQTIHSDKENQ--TNQSKKKQKPRPSFLEQVQNKWSVKTTS 90

Query: 319 LRQNFPWQE------QENGDTNQQFQ-AQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIK 477
           LR+ FPWQE      +E  + + QF  A+T                          ++IK
Sbjct: 91  LREKFPWQELNSVSIEEVAEQDLQFSVAKTEENPVVNESVSSG-------------SRIK 137

Query: 478 STLAPWVHGNEPRKKVFNS 534
             LAPWVHGN+P+K   +S
Sbjct: 138 VNLAPWVHGNQPKKSQLDS 156


>ref|XP_009602352.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial isoform X2 [Nicotiana
           tomentosiformis]
          Length = 832

 Score =  103 bits (256), Expect = 6e-21
 Identities = 61/139 (43%), Positives = 77/139 (55%), Gaps = 7/139 (5%)
 Frame = +1

Query: 139 PKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPS 318
           PK  SL  F A+  +I C  QT+  D E Q  TN +KKK+KPRPSFLEQVQNKWS+KT S
Sbjct: 33  PKIQSLHNFRAKNIRIYCSSQTIHSDKENQ--TNQSKKKQKPRPSFLEQVQNKWSVKTTS 90

Query: 319 LRQNFPWQE------QENGDTNQQFQ-AQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIK 477
           LR+ FPWQE      +E  + + QF  A+T                          ++IK
Sbjct: 91  LREKFPWQELNSVSIEEVAEQDLQFSVAKTEENPVVNESVSSG-------------SRIK 137

Query: 478 STLAPWVHGNEPRKKVFNS 534
             LAPWVHGN+P+K   +S
Sbjct: 138 VNLAPWVHGNQPKKSQLDS 156


>ref|XP_018626790.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial isoform X1 [Nicotiana
           tomentosiformis]
          Length = 840

 Score =  103 bits (256), Expect = 6e-21
 Identities = 61/139 (43%), Positives = 77/139 (55%), Gaps = 7/139 (5%)
 Frame = +1

Query: 139 PKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPS 318
           PK  SL  F A+  +I C  QT+  D E Q  TN +KKK+KPRPSFLEQVQNKWS+KT S
Sbjct: 33  PKIQSLHNFRAKNIRIYCSSQTIHSDKENQ--TNQSKKKQKPRPSFLEQVQNKWSVKTTS 90

Query: 319 LRQNFPWQE------QENGDTNQQFQ-AQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIK 477
           LR+ FPWQE      +E  + + QF  A+T                          ++IK
Sbjct: 91  LREKFPWQELNSVSIEEVAEQDLQFSVAKTEENPVVNESVSSG-------------SRIK 137

Query: 478 STLAPWVHGNEPRKKVFNS 534
             LAPWVHGN+P+K   +S
Sbjct: 138 VNLAPWVHGNQPKKSQLDS 156


>ref|XP_016479482.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial-like isoform X1 [Nicotiana
           tabacum]
          Length = 840

 Score =  103 bits (256), Expect = 6e-21
 Identities = 61/139 (43%), Positives = 77/139 (55%), Gaps = 7/139 (5%)
 Frame = +1

Query: 139 PKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPS 318
           PK  SL  F A+  +I C  QT+  D E Q  TN +KKK+KPRPSFLEQVQNKWS+KT S
Sbjct: 33  PKIQSLHNFRAKNIRIYCSSQTIHSDKENQ--TNQSKKKQKPRPSFLEQVQNKWSVKTTS 90

Query: 319 LRQNFPWQE------QENGDTNQQFQ-AQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIK 477
           LR+ FPWQE      +E  + + QF  A+T                          ++IK
Sbjct: 91  LREKFPWQELNSVSIEEVAEQDLQFSVAKTEENPVVNESVSSG-------------SRIK 137

Query: 478 STLAPWVHGNEPRKKVFNS 534
             LAPWVHGN+P+K   +S
Sbjct: 138 VNLAPWVHGNQPKKSQLDS 156


>ref|XP_016477563.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial-like, partial [Nicotiana
           tabacum]
          Length = 505

 Score =  101 bits (251), Expect = 2e-20
 Identities = 60/175 (34%), Positives = 87/175 (49%)
 Frame = +1

Query: 139 PKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPS 318
           PK  SL+ F A+  +I C  QT+  D E Q  TN  KKK+KPRPSFLEQVQ+KWS+KT S
Sbjct: 33  PKIQSLQNFRAKSIRIYCSSQTIHSDKENQ--TNQTKKKQKPRPSFLEQVQDKWSVKTTS 90

Query: 319 LRQNFPWQEQENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTLAPWV 498
           LR+ FPWQE  +    +  +                             ++IK  LAPWV
Sbjct: 91  LREKFPWQELNSVSIEEVAEQDLLSSVSKTEENPVVNESVSSG------SRIKVNLAPWV 144

Query: 499 HGNEPRKKVFNSKGSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVKKKIGEFDEI 663
           HGN+P+K   +S  +   ++  +   ++  E  + S     D  ++ K+    E+
Sbjct: 145 HGNQPKKSQLDSFEARNFEKNANWENNVSEELDIESGKDEKDIKLETKVSHRYEV 199


>ref|XP_009799178.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Nicotiana sylvestris]
          Length = 827

 Score =  101 bits (251), Expect = 3e-20
 Identities = 60/175 (34%), Positives = 87/175 (49%)
 Frame = +1

Query: 139 PKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPS 318
           PK  SL+ F A+  +I C  QT+  D E Q  TN  KKK+KPRPSFLEQVQ+KWS+KT S
Sbjct: 33  PKIQSLQNFRAKSIRIYCSSQTIHSDKENQ--TNQTKKKQKPRPSFLEQVQDKWSVKTTS 90

Query: 319 LRQNFPWQEQENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTLAPWV 498
           LR+ FPWQE  +    +  +                             ++IK  LAPWV
Sbjct: 91  LREKFPWQELNSVSIEEVAEQDLLSSVSKTEENPVVNESVSSG------SRIKVNLAPWV 144

Query: 499 HGNEPRKKVFNSKGSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVKKKIGEFDEI 663
           HGN+P+K   +S  +   ++  +   ++  E  + S     D  ++ K+    E+
Sbjct: 145 HGNQPKKSQLDSFEARNFEKNANWENNVSEELDIESGKDEKDIKLETKVSHRYEV 199


>gb|OVA05797.1| RNA-binding [Macleaya cordata]
          Length = 903

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 74/232 (31%), Positives = 107/232 (46%), Gaps = 13/232 (5%)
 Frame = +1

Query: 193 CQQTVEVDTETQHNTNLA----KKKRKPRPSFLEQVQNKWSLKTPSLRQNFPWQEQENGD 360
           C QT+ V++E    T +     KKKRK RPSF EQV+++WSLK  S R  FPWQEQE  +
Sbjct: 49  CYQTIRVESEVPQKTKVTSKTPKKKRKLRPSFYEQVRDRWSLKNHSQRLKFPWQEQEEQE 108

Query: 361 TNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTLAPWVHGNEPRKKVFNSK- 537
             Q+ Q Q                          +  I    APWVH ++PR+  F S+ 
Sbjct: 109 QEQE-QEQEEKEENQQLSPTFNSLEEKEVNFDLGNRVIS---APWVHRSKPREPHFKSET 164

Query: 538 -----GSIKSQEKVHQTEHLQNEEPMV--SVIQGSDDLVKKKIGEFDEIPIGL-PEKNEN 693
                  I  +E   + E+L+N + +V  S     ++     I   D   IGL  EK  +
Sbjct: 165 KITKNSCIDGEEVSERKENLKNSKRVVNNSNRSSEENEFLGSIVNIDASQIGLAEEKLMD 224

Query: 694 LGVDKSKNVTSMEDLSISYRVASSVKCSAGADDLKRLPWERKINEEFVKENK 849
            G D +  ++  E  S S     +   S+G++D  +LPWE+K   E V  +K
Sbjct: 225 FGDDFNDIISLDEYSSRSDENVDTFVGSSGSNDSVKLPWEKKSTIESVDGHK 276


>ref|XP_022147610.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
           [Momordica charantia]
          Length = 859

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 64/242 (26%), Positives = 101/242 (41%), Gaps = 14/242 (5%)
 Frame = +1

Query: 136 HPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNL---AKKKRKPRPSFLEQVQNKWSL 306
           H +  S   F   + KISC    ++VDTE      +    KKKRKPRPSFLEQ++NKWS+
Sbjct: 34  HSEIQSSIVFTPSRFKISCSNNAIQVDTEPPRRIRVDFEVKKKRKPRPSFLEQIRNKWSI 93

Query: 307 KTPSLRQNFPWQEQ-ENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKST 483
           K  S R  FPWQ+Q +  +  ++ + +                           +  +  
Sbjct: 94  KPTSSRDKFPWQQQKQRREPPEEEEEEVIEQVGSESSVLEREPRNDATPAVRVASTTRGI 153

Query: 484 LAPWVHGNEPRKKVFN-----SKGSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVKKKIG 648
            APWVHG++ R   F+      KG + ++   +    ++N +              +  G
Sbjct: 154 SAPWVHGSQSRDLQFDFNRETPKGEVFNEICENSANGVRNFDASTKSFDDGPCRGGESNG 213

Query: 649 EF----DEIPIGLPEKNENLGVDKSKNVTSMEDLSI-SYRVASSVKCSAGADDLKRLPWE 813
           E     DEI +   E  E +   +   + ++E+ S  S     SV       D   LPW+
Sbjct: 214 EIGESTDEILVEFSEDEEEINPVRLNVLPAIEERSASSENFVQSVSSGNDCSDPVDLPWK 273

Query: 814 RK 819
           R+
Sbjct: 274 RE 275


>ref|XP_019173427.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial [Ipomoea nil]
          Length = 891

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
 Frame = +1

Query: 145 THSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPSLR 324
           THS   F   + K+ C Q T    T T       +KKRKPRPSFLE++Q KWS+K  S R
Sbjct: 26  THSPTSFRTLRFKLYCSQTTHSEITYTTPT----RKKRKPRPSFLEKIQEKWSVKPTSPR 81

Query: 325 QNFPWQEQENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTLAPWVHG 504
           +NFPWQEQ++ +T ++  ++                          +++I+  L PW HG
Sbjct: 82  KNFPWQEQKSEETVKEI-SEPGLQCFANGTEHEEEKVEVSDSVSSSNSRIEVKLPPWAHG 140

Query: 505 NEPRKKVFNSKGSI---KSQEKVHQTEHLQN 588
             PR+ +F+S   I     +E ++ +E  +N
Sbjct: 141 ALPREHLFSSDARILQDTEEESINVSETFEN 171