BLASTX nr result

ID: Rehmannia29_contig00006143 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00006143
         (736 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit ...    52   1e-09
gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygro...    53   2e-08
ref|XP_019171018.1| PREDICTED: uncharacterized protein LOC109166...    46   3e-06
ref|XP_019153897.1| PREDICTED: uncharacterized protein LOC109150...    44   7e-06

>gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit B-like [Dorcoceras
           hygrometricum]
          Length = 161

 Score = 52.4 bits (124), Expect(2) = 1e-09
 Identities = 24/51 (47%), Positives = 37/51 (72%)
 Frame = -3

Query: 164 GDRIQGTVRRFQIDQFKKILKEGRVYAIRDFIVANQTDKYKATTTKHKIFF 12
           GDRI  +V++  +D+ + ILK+G ++AI++ IVA    KYK TT+K+KI F
Sbjct: 35  GDRIHASVKKPVLDKVRHILKDGHLFAIKNIIVAENRMKYKTTTSKYKINF 85



 Score = 38.9 bits (89), Expect(2) = 1e-09
 Identities = 19/34 (55%), Positives = 25/34 (73%)
 Frame = -1

Query: 334 QWVVKLRLIHKYEKPAYNDKNQIQSLECVFNDIE 233
           QW +KLRL+  YE PAY +K+   +LECVF+D E
Sbjct: 2   QWALKLRLVRCYELPAY-EKSGDFTLECVFHDKE 34


>gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygrometricum]
          Length = 250

 Score = 52.8 bits (125), Expect(2) = 2e-08
 Identities = 25/51 (49%), Positives = 36/51 (70%)
 Frame = -3

Query: 164 GDRIQGTVRRFQIDQFKKILKEGRVYAIRDFIVANQTDKYKATTTKHKIFF 12
           GDRI  +V++  +D+ K ILKEG ++AI++ IVA    KYK T +K+KI F
Sbjct: 35  GDRIHASVKKPVLDRVKPILKEGHLFAIKNIIVAENRMKYKTTASKYKINF 85



 Score = 34.7 bits (78), Expect(2) = 2e-08
 Identities = 18/34 (52%), Positives = 22/34 (64%)
 Frame = -1

Query: 334 QWVVKLRLIHKYEKPAYNDKNQIQSLECVFNDIE 233
           QW +KLRL+  YE  AY  KN   +LECV +D E
Sbjct: 2   QWTLKLRLVRCYELAAYG-KNGDFTLECVLHDKE 34


>ref|XP_019171018.1| PREDICTED: uncharacterized protein LOC109166548 [Ipomoea nil]
          Length = 335

 Score = 46.2 bits (108), Expect(2) = 3e-06
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = -3

Query: 164 GDRIQGTVRRFQIDQFKKILKEGRVYAIRDFIVANQTDKYKATTTKHKIFF 12
           G  + G + +  ++QF K+LKEG+VYAI+DF V +   +YK T   + I F
Sbjct: 51  GTYVHGNISKDCVEQFSKLLKEGKVYAIKDFAVISHYYQYKTTDHTYMIRF 101



 Score = 33.5 bits (75), Expect(2) = 3e-06
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -1

Query: 355 DLNVTKTQWVVKLRLIHKYEKPAYNDKNQIQSLECVFNDIE 233
           DL ++  +  ++LRL+  Y  P   +   I+S EC+F+D E
Sbjct: 10  DLGISTYKKAIRLRLVRTYNVPEGRNSEAIKSQECLFHDSE 50


>ref|XP_019153897.1| PREDICTED: uncharacterized protein LOC109150424 [Ipomoea nil]
          Length = 512

 Score = 43.9 bits (102), Expect(2) = 7e-06
 Identities = 20/51 (39%), Positives = 32/51 (62%)
 Frame = -3

Query: 164 GDRIQGTVRRFQIDQFKKILKEGRVYAIRDFIVANQTDKYKATTTKHKIFF 12
           G  I G + +  ++++ K+LKEG+VYAI+DF V +   +YK T   + I F
Sbjct: 52  GTYIHGNIPKECVEKYSKLLKEGKVYAIKDFAVISHYYQYKTTDHSYMIRF 102



 Score = 34.7 bits (78), Expect(2) = 7e-06
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -1

Query: 382 MATMITLICDLNVTKTQWVVKLRLIHKYEKP-AYNDKNQIQSLECVFNDIE 233
           MA +  L  D+ ++  +  ++LRLI  Y  P   N  + I+S ECVF+D E
Sbjct: 1   MAPVFILGKDIKLSTYKKAIRLRLIRTYTVPEGRNSSDSIKSQECVFHDFE 51


Top