BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00005633
         (667 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011073037.1| uncharacterized protein LOC105158097 [Sesamu...   104   2e-42
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei...   107   3e-40
gb|KZV30316.1| hypothetical protein F511_28209 [Dorcoceras hygro...   129   1e-33
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro...    86   4e-31
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...    80   8e-30
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo...    81   3e-27
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    77   6e-27
gb|PNX96445.1| copia LTR rider [Trifolium pratense]                    81   6e-27
gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo...    76   2e-26
ref|XP_020547423.1| uncharacterized protein LOC110011566 [Sesamu...   108   4e-26
gb|KZV34961.1| hypothetical protein F511_04935 [Dorcoceras hygro...   112   5e-26
gb|AAK29467.1| polyprotein-like [Solanum chilense]                     80   6e-26
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         79   1e-25
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]          79   1e-25
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]                         79   1e-25
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      79   2e-25
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]             79   2e-25
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                   75   5e-25
gb|KYP36890.1| Retrovirus-related Pol polyprotein from transposo...    78   5e-25
gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo...    75   7e-25

>ref|XP_011073037.1| uncharacterized protein LOC105158097 [Sesamum indicum]
          Length = 472

 Score =  104 bits (260), Expect(2) = 2e-42
 Identities = 52/96 (54%), Positives = 71/96 (73%)
 Frame = -1

Query: 310 WGKGLMKILKGNLVIFKAVKRRNLYVCTAELESSLQNSVNAVCGSENDKTDLWHKRLGHM 131
           WGKGLMKI+KG+LV+FKA ++RNLY+CTA  + ++  SV +VC    D T LWHKRLGH+
Sbjct: 384 WGKGLMKIMKGSLVVFKAERKRNLYICTASYD-NIAASV-SVC----DLTSLWHKRLGHI 437

Query: 130 SAKGLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKV 23
           S KGL+ L+++G    DK+  + FCD CV+GK  +V
Sbjct: 438 SQKGLDFLKRDGVL-NDKIDKLDFCDECVMGKQHRV 472



 Score = 96.7 bits (239), Expect(2) = 2e-42
 Identities = 53/109 (48%), Positives = 72/109 (66%)
 Frame = -2

Query: 642 NQNFKQNEHANMASTSENVPDVFMVYENCADVNSVRSNSVCETEWLVDSGCTFHMTPFKR 463
           ++N+   E  +  S   N  +VF+VYE     NSV +  +   EWL+DSGCTFHM+PFK 
Sbjct: 264 DRNYDDKEKVSNVSIESN-GEVFVVYE----ANSVSTFDM--HEWLIDSGCTFHMSPFKD 316

Query: 462 LFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHVPD 316
           +F+N K    G VS+AN+K+C I G+GD+ L FD GY + LKNVR+VPD
Sbjct: 317 IFTNLKYEHAGFVSMANEKKCEIKGLGDISLCFD-GYKMLLKNVRYVPD 364


>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Erythranthe guttata]
          Length = 598

 Score =  107 bits (267), Expect(2) = 3e-40
 Identities = 52/99 (52%), Positives = 68/99 (68%)
 Frame = -1

Query: 310 WGKGLMKILKGNLVIFKAVKRRNLYVCTAELESSLQNSVNAVCGSENDKTDLWHKRLGHM 131
           WG G M I+KG+  +FKA++  N+YVC+AE  +S+    N V   +ND ++LWHK LGHM
Sbjct: 101 WGDGCMNIMKGSRYLFKALRMGNMYVCSAESSASM----NVV---QNDLSELWHKGLGHM 153

Query: 130 SAKGLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFP 14
           S K L IL KN YFG DK+S +  CDSC+LGK + V FP
Sbjct: 154 SNKWLSILHKNQYFGNDKVSSVTLCDSCILGKQTHVLFP 192



 Score = 86.7 bits (213), Expect(2) = 3e-40
 Identities = 44/79 (55%), Positives = 58/79 (73%)
 Frame = -2

Query: 555 ADVNSVRSNSVCETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDV 376
           A VNSV + S+ E EWL+DS C++HMTP + +FS+Y ++ +  V+LA+     + GIG V
Sbjct: 3   ASVNSVLA-SLSENEWLLDSACSYHMTPRREVFSDYVQMKNCGVTLADGTMIVVNGIGTV 61

Query: 375 CLKFDSGYVLTLKNVRHVP 319
           CLKF SG VLTLKNVRHVP
Sbjct: 62  CLKFVSGSVLTLKNVRHVP 80


>gb|KZV30316.1| hypothetical protein F511_28209 [Dorcoceras hygrometricum]
          Length = 207

 Score =  129 bits (324), Expect = 1e-33
 Identities = 63/99 (63%), Positives = 75/99 (75%)
 Frame = -1

Query: 310 WGKGLMKILKGNLVIFKAVKRRNLYVCTAELESSLQNSVNAVCGSENDKTDLWHKRLGHM 131
           WG G MKI+KG+LV+FKAVK  NLYVC A    S + SVN+V   +ND TDLWH+ LGHM
Sbjct: 19  WGNGCMKIIKGSLVLFKAVKLNNLYVCHANSVCS-KASVNSV---QNDVTDLWHRILGHM 74

Query: 130 SAKGLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFP 14
           S++GLEIL K G FG DKLSC+PFCDSC+ GK  +V FP
Sbjct: 75  SSRGLEILHKQGCFGTDKLSCVPFCDSCIYGKQHRVNFP 113


>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
          Length = 1309

 Score = 85.5 bits (210), Expect(2) = 4e-31
 Identities = 45/99 (45%), Positives = 60/99 (60%)
 Frame = -1

Query: 301 GLMKILKGNLVIFKAVKRRNLYVCTAELESSLQNSVNAVCGSENDKTDLWHKRLGHMSAK 122
           G MK++KG+L + +  +   LY+  A   S++  S NA  G  N K  LWH RLGH+S K
Sbjct: 370 GTMKVIKGSLTVMRGSQDNGLYILEA---STVTGSSNAAVGGAN-KARLWHLRLGHVSEK 425

Query: 121 GLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFPVSS 5
           GL  L K    G+DK+  + FCD CVLGK S+V+F  SS
Sbjct: 426 GLVELSKQNLLGRDKVDDLSFCDECVLGKCSRVRFKRSS 464



 Score = 77.8 bits (190), Expect(2) = 4e-31
 Identities = 41/117 (35%), Positives = 63/117 (53%)
 Frame = -2

Query: 666 RECPNKRGNQNFKQNEHANMASTSENVPDVFMVYENCADVNSVRSNSVCETEWLVDSGCT 487
           ++CP++R     ++ +  + A  S+        YE+   +   R+N   +  W++DSGC+
Sbjct: 240 KDCPDRRARNPERRKDPGDAAVVSDG-------YESAEVLVVSRTNK--QDCWVMDSGCS 290

Query: 486 FHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHVPD 316
           FHM P K  F N  E   G V L N ++C ++GIG V LK   G V T+  VR+VPD
Sbjct: 291 FHMCPIKSWFQNLVEEESGHVLLGNNRECKVMGIGSVLLKMHDGCVRTITEVRYVPD 347


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score = 80.5 bits (197), Expect(2) = 8e-30
 Identities = 37/76 (48%), Positives = 49/76 (64%)
 Frame = -2

Query: 543 SVRSNSVCETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKF 364
           SV S+   +TEW++DSGCTFHM P+K LF+  + V  G V + N  QC I GIG + +K 
Sbjct: 276 SVSSDKRSKTEWILDSGCTFHMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKT 335

Query: 363 DSGYVLTLKNVRHVPD 316
             G + TL NVR +PD
Sbjct: 336 HDGTIKTLSNVRFIPD 351



 Score = 78.6 bits (192), Expect(2) = 8e-30
 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
 Frame = -1

Query: 301 GLMKILKGNLVIFKAVKRRNLYVCTAELESSLQNSVNAVCGSENDK--TDLWHKRLGHMS 128
           G++K+ KG +V+ KA +  +LY+    L+ S+     AV  S +DK  T LWH RLGHMS
Sbjct: 374 GVLKVSKGAIVLLKANRIGSLYI----LQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMS 429

Query: 127 AKGLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFPVSS 5
            KG+ +L K G  G   +  + FC+ CV GK  +V F  ++
Sbjct: 430 EKGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTAT 470


>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 609

 Score = 80.9 bits (198), Expect(2) = 3e-27
 Identities = 37/96 (38%), Positives = 58/96 (60%)
 Frame = -1

Query: 301 GLMKILKGNLVIFKAVKRRNLYVCTAELESSLQNSVNAVCGSENDKTDLWHKRLGHMSAK 122
           G+M+I KG+ V+ + +K+ NLY+      + +  SV+       D T LWH RLGHMS +
Sbjct: 301 GVMEISKGSTVVIRGIKKGNLYMLQGST-NLISESVSVADKHTPDLTHLWHMRLGHMSER 359

Query: 121 GLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFP 14
           G+ +L+K    G   +  + FC+ CV+GKH ++KFP
Sbjct: 360 GMMVLRKQKLLGDHTVKELKFCEHCVVGKHHRIKFP 395



 Score = 69.7 bits (169), Expect(2) = 3e-27
 Identities = 34/117 (29%), Positives = 59/117 (50%)
 Frame = -2

Query: 666 RECPNKRGNQNFKQNEHANMASTSENVPDVFMVYENCADVNSVRSNSVCETEWLVDSGCT 487
           ++CP KR  ++       + +  +E V  +   +++ A+            +W++DSGC+
Sbjct: 174 KDCPKKRNQKSVAVAAQEDSSFENELVLSIVDNHQHSAE------------QWVLDSGCS 221

Query: 486 FHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHVPD 316
           +HM P +  F  Y++   G V + N   C  +GIG + +K   G + TL  VRHVPD
Sbjct: 222 YHMCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMHDGVIRTLTEVRHVPD 278


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease
 emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
          Length = 1328

 Score = 76.6 bits (187), Expect(2) = 6e-27
 Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
 Frame = -2

Query: 666 RECPNKR---GNQNFKQNEH--ANMASTSENVPDVFMVYENCADVNSVRSNSVCETEWLV 502
           R+CPN R   G  + ++N+   A M   ++NV       E C  ++        E+EW+V
Sbjct: 243 RDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGP------ESEWVV 296

Query: 501 DSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHV 322
           D+  + H TP + LF  Y     G+V + N     I GIGD+C+K + G  L LK+VRHV
Sbjct: 297 DTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHV 356

Query: 321 PD 316
           PD
Sbjct: 357 PD 358



 Score = 72.8 bits (177), Expect(2) = 6e-27
 Identities = 41/96 (42%), Positives = 53/96 (55%)
 Frame = -1

Query: 292 KILKGNLVIFKAVKRRNLYVCTAELESSLQNSVNAVCGSENDKTDLWHKRLGHMSAKGLE 113
           ++ KG+LVI K V R  LY   AE+    Q  +NA    +    DLWHKR+GHMS KGL+
Sbjct: 384 RLTKGSLVIAKGVARGTLYRTNAEI---CQGELNAA--QDEISVDLWHKRMGHMSEKGLQ 438

Query: 112 ILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFPVSS 5
           IL K       K + +  CD C+ GK  +V F  SS
Sbjct: 439 ILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSS 474


>gb|PNX96445.1| copia LTR rider [Trifolium pratense]
          Length = 1318

 Score = 80.9 bits (198), Expect(2) = 6e-27
 Identities = 39/100 (39%), Positives = 58/100 (58%)
 Frame = -1

Query: 316 FXWGKGLMKILKGNLVIFKAVKRRNLYVCTAELESSLQNSVNAVCGSENDKTDLWHKRLG 137
           F   K +++++KG+  + + VK++ LY   AE+ S    S N V      KT++WH RLG
Sbjct: 364 FQGEKSILRVMKGSKEVLRGVKKQGLYTLEAEVVSG---STNVVSTKPLSKTEIWHMRLG 420

Query: 136 HMSAKGLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKF 17
           H+S +GL  L K    G DK+  + FC+ CV GK  +VKF
Sbjct: 421 HVSERGLVELGKQNLLGGDKIEKLKFCEPCVFGKSCRVKF 460



 Score = 68.6 bits (166), Expect(2) = 6e-27
 Identities = 35/75 (46%), Positives = 43/75 (57%)
 Frame = -2

Query: 540 VRSNSVCETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFD 361
           V S+S    EW++DSGCT+HMTP K LF    +   GSV L N K C I G+G V  K  
Sbjct: 272 VVSSSDSRKEWIMDSGCTWHMTPNKDLFEELCDQDGGSVLLGNNKACKIAGVGSVRFKLH 331

Query: 360 SGYVLTLKNVRHVPD 316
              +  L  VR+VPD
Sbjct: 332 DESIRLLTEVRYVPD 346


>gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 448

 Score = 75.9 bits (185), Expect(2) = 2e-26
 Identities = 37/96 (38%), Positives = 56/96 (58%)
 Frame = -1

Query: 301 GLMKILKGNLVIFKAVKRRNLYVCTAELESSLQNSVNAVCGSENDKTDLWHKRLGHMSAK 122
           G+M+I +G+ V+ +  K+ NLY+      SS+  SV+    +  D T LWH RLGHMS +
Sbjct: 140 GVMEIKRGSTVVMRGFKKGNLYMLQGST-SSISESVSVAEKNIPDLTYLWHMRLGHMSER 198

Query: 121 GLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFP 14
           G+ IL +    G   +  + FC+ CV GK  ++KFP
Sbjct: 199 GMMILSRQQLLGNHTVKELRFCEHCVFGKQHRIKFP 234



 Score = 71.6 bits (174), Expect(2) = 2e-26
 Identities = 38/116 (32%), Positives = 58/116 (50%)
 Frame = -2

Query: 663 ECPNKRGNQNFKQNEHANMASTSENVPDVFMVYENCADVNSVRSNSVCETEWLVDSGCTF 484
           +CP K+           N   T+  V +     +N   ++ V ++     +W++DSGC++
Sbjct: 13  DCPKKK-----------NQKPTAVTVQESTSSSDNELVLSIVDNHQQSADQWVLDSGCSY 61

Query: 483 HMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHVPD 316
           HM P +  F  Y+E L G V + N   C  VGIG + L+   G + TL  VRHVPD
Sbjct: 62  HMCPNRSWFLTYEERLGGRVFMGNDMPCKTVGIGTIQLRMHDGVIRTLTEVRHVPD 117


>ref|XP_020547423.1| uncharacterized protein LOC110011566 [Sesamum indicum]
          Length = 161

 Score =  108 bits (270), Expect = 4e-26
 Identities = 54/100 (54%), Positives = 68/100 (68%)
 Frame = -1

Query: 310 WGKGLMKILKGNLVIFKAVKRRNLYVCTAELESSLQNSVNAVCGSENDKTDLWHKRLGHM 131
           WGKGLMK++KG+L++F   +RRNLY+CT     S  N +  V   E DKT LWHKRLGH+
Sbjct: 49  WGKGLMKVMKGSLIVFIVERRRNLYMCTV----SYDNIIAFV--PECDKTTLWHKRLGHI 102

Query: 130 SAKGLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFPV 11
           S KGL++L++ G     K   + FCD CVLGKH KV FPV
Sbjct: 103 SLKGLDVLKREGIL-NGKFEKLDFCDDCVLGKHHKVHFPV 141


>gb|KZV34961.1| hypothetical protein F511_04935 [Dorcoceras hygrometricum]
          Length = 345

 Score =  112 bits (281), Expect = 5e-26
 Identities = 56/98 (57%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
 Frame = -1

Query: 295 MKILKGNLVIFKAVKRRNLYVCTAE--LESSLQNSVNAVCGSENDKTDLWHKRLGHMSAK 122
           MKILKG+LV+FKA +  NLYVC A    +    NS+      ++D T+LWH RLGHMS+K
Sbjct: 1   MKILKGSLVLFKADRLNNLYVCNANPICDKICVNSI------KSDMTNLWHNRLGHMSSK 54

Query: 121 GLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFPVS 8
           GLE L K G FG DKLSCMPFC+SCV GK  +V FP +
Sbjct: 55  GLETLHKQGCFGNDKLSCMPFCESCVYGKQHRVSFPTA 92


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 80.1 bits (196), Expect(2) = 6e-26
 Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
 Frame = -2

Query: 666 RECPN-KRGN-QNFKQNEHANMASTSENVPDVFMVY---ENCADVNSVRSNSVCETEWLV 502
           R+CPN KRG  ++  Q    N A+  +N  DV ++    E C  +         E+EW+V
Sbjct: 244 RDCPNPKRGKGESSGQKNDDNTAAMVQNNDDVVLLINEEEECMHLAGT------ESEWVV 297

Query: 501 DSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHV 322
           D+  ++H TP + LF  Y    +G+V + N     I GIGD+C K + G  L LK+VRHV
Sbjct: 298 DTAASYHATPVRDLFCRYVAGDYGNVKMGNTSYSKIAGIGDICFKTNVGCTLVLKDVRHV 357

Query: 321 PD 316
           PD
Sbjct: 358 PD 359



 Score = 65.9 bits (159), Expect(2) = 6e-26
 Identities = 39/96 (40%), Positives = 51/96 (53%)
 Frame = -1

Query: 292 KILKGNLVIFKAVKRRNLYVCTAELESSLQNSVNAVCGSENDKTDLWHKRLGHMSAKGLE 113
           ++ KG LVI K V R  LY   AE+    Q  +NA    E +  DLWHKR+GH S KGL+
Sbjct: 385 RLTKGALVIAKGVARGTLYRTNAEI---CQGELNAA--HEENSADLWHKRMGHTSEKGLQ 439

Query: 112 ILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFPVSS 5
           IL K       K + +  C+  + GK  +V F  SS
Sbjct: 440 ILSKKSLISFTKGTTIKPCNYWLFGKQHRVSFQTSS 475


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 79.3 bits (194), Expect(2) = 1e-25
 Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
 Frame = -1

Query: 307 GKGLMKILKGNLVIFKA-VKRRNLYVCTAELESSLQNSVNAVCGS--ENDKTDLWHKRLG 137
           G G++K+ KG+LV+ KA +K  NLY       +++  +V  V  S   +D T+LWH RLG
Sbjct: 385 GDGILKVTKGSLVVMKASIKSANLYHLQG---TTILGNVATVSDSLSNSDATNLWHMRLG 441

Query: 136 HMSAKGLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFPVSS 5
           HMS  GL  L K G      +S + FC+ C+ GKH +VKF  S+
Sbjct: 442 HMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTST 485



 Score = 65.9 bits (159), Expect(2) = 1e-25
 Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
 Frame = -2

Query: 630 KQNEHANMASTSENVPD--VFMVYENCADVNSVRSNSVCETEWLVDSGCTFHMTPFKRLF 457
           K+ E    A  ++   D  + + Y  CA  +          +W++D+ CT+HM P +  F
Sbjct: 267 KKEEEGKAAVVTDEKSDAELLVAYAGCAQTSD---------QWILDTACTYHMCPNRDWF 317

Query: 456 SNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHVPD 316
           + Y+ V  G+V + +   C + GIG V +K   G + TL +VRH+P+
Sbjct: 318 ATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPN 364


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score = 79.3 bits (194), Expect(2) = 1e-25
 Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
 Frame = -1

Query: 307 GKGLMKILKGNLVIFKA-VKRRNLYVCTAELESSLQNSVNAVCGS--ENDKTDLWHKRLG 137
           G G++K+ KG+LV+ KA +K  NLY       +++  +V AV  S   +D T+LWH RLG
Sbjct: 217 GDGILKVTKGSLVVMKADIKSANLYHLRG---TTILGNVAAVSDSLSNSDATNLWHMRLG 273

Query: 136 HMSAKGLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFPVSS 5
           HMS  GL  L K G      +  + FC+ C+ GKH +VKF  S+
Sbjct: 274 HMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTST 317



 Score = 65.5 bits (158), Expect(2) = 1e-25
 Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
 Frame = -2

Query: 630 KQNEHANMASTSENVPD--VFMVYENCADVNSVRSNSVCETEWLVDSGCTFHMTPFKRLF 457
           K+ E    A  ++   D  + + Y  CA  +          +W++D+ CT+HM P +  F
Sbjct: 99  KKEEEGKAAVVTDEKSDAELLVAYAGCAQTSD---------QWILDTACTYHMCPNRDWF 149

Query: 456 SNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHVPD 316
           + Y+ V  G+V + +   C + GIG V +K   G + TL +VRH+P+
Sbjct: 150 ATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPN 196


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]
          Length = 944

 Score = 79.3 bits (194), Expect(2) = 1e-25
 Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
 Frame = -1

Query: 307 GKGLMKILKGNLVIFKA-VKRRNLYVCTAELESSLQNSVNAVCGS--ENDKTDLWHKRLG 137
           G G++K+ KG+LV+ KA +K  NLY       +++  +V AV  S   +D T+LWH RLG
Sbjct: 217 GDGILKVTKGSLVVMKADIKSANLYHLRG---TTILGNVAAVSDSLSNSDATNLWHMRLG 273

Query: 136 HMSAKGLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFPVSS 5
           HMS  GL  L K G      +  + FC+ C+ GKH +VKF  S+
Sbjct: 274 HMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTST 317



 Score = 65.5 bits (158), Expect(2) = 1e-25
 Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
 Frame = -2

Query: 630 KQNEHANMASTSENVPD--VFMVYENCADVNSVRSNSVCETEWLVDSGCTFHMTPFKRLF 457
           K+ E    A  ++   D  + + Y  CA  +          +W++D+ CT+HM P +  F
Sbjct: 99  KKEEEGKAAVVTDEKSDAELLVAYAGCAQTSD---------QWILDTACTYHMCPNRDWF 149

Query: 456 SNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHVPD 316
           + Y+ V  G+V + +   C + GIG V +K   G + TL +VRH+P+
Sbjct: 150 ATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPN 196


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 79.0 bits (193), Expect(2) = 2e-25
 Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
 Frame = -1

Query: 307 GKGLMKILKGNLVIFKA-VKRRNLYVCTAELESSLQNSVNAVCGS--ENDKTDLWHKRLG 137
           G G++K+ KG+LV+ KA +K  NLY       +++  +V AV  S   +D T+LWH RLG
Sbjct: 294 GDGILKVTKGSLVVMKADIKYANLYHLRG---TTILGNVAAVSDSLSNSDATNLWHMRLG 350

Query: 136 HMSAKGLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFPVSS 5
           HMS  GL  L K G      +  + FC+ C+ GKH +VKF  S+
Sbjct: 351 HMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTST 394



 Score = 65.5 bits (158), Expect(2) = 2e-25
 Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
 Frame = -2

Query: 630 KQNEHANMASTSENVPD--VFMVYENCADVNSVRSNSVCETEWLVDSGCTFHMTPFKRLF 457
           K+ E    A  ++   D  + + Y  CA  +          +W++D+ CT+HM P +  F
Sbjct: 176 KKEEEGKAAVVTDEKSDAELLVAYAGCAQTSD---------QWILDTACTYHMCPNRDWF 226

Query: 456 SNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHVPD 316
           + Y+ V  G+V + +   C + GIG V +K   G + TL +VRH+P+
Sbjct: 227 ATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPN 273


>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
          Length = 778

 Score = 78.6 bits (192), Expect(2) = 2e-25
 Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
 Frame = -1

Query: 307 GKGLMKILKGNLVIFKA-VKRRNLYVCTAELESSLQNSVNAVCGS--ENDKTDLWHKRLG 137
           G G++K+ KG+LV+ KA +K  NLY       +++  +V AV  S   +D T+LWH RLG
Sbjct: 351 GDGILKVTKGSLVVMKADIKSANLYHLRG---TTILGNVAAVSDSLSNSDATNLWHMRLG 407

Query: 136 HMSAKGLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFPVSS 5
           HMS  GL  L K G      +  + FC+ C+ GKH +VKF  S+
Sbjct: 408 HMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGKHKRVKFNTST 451



 Score = 65.9 bits (159), Expect(2) = 2e-25
 Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
 Frame = -2

Query: 630 KQNEHANMASTSENVPD--VFMVYENCADVNSVRSNSVCETEWLVDSGCTFHMTPFKRLF 457
           K+ E    A  ++   D  + + Y  CA  +          +W++D+ CT+HM P +  F
Sbjct: 233 KKEEEGKAAVVTDEKSDAELLVAYVGCAQTSD---------QWILDTACTYHMCPNRDWF 283

Query: 456 SNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHVPD 316
           + Y+ V  G+V + +   C + GIG V +K   G + TL +VRH+P+
Sbjct: 284 ATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPN 330


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score = 75.5 bits (184), Expect(2) = 5e-25
 Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
 Frame = -1

Query: 301 GLMKILKGNLVIFKAVK-RRNLYVCTAELESSLQNSVNAVCGSENDKTDLWHKRLGHMSA 125
           G++K++KG+LV+ KA K   NLY+   +       SV    GS+ + T +WH+RLGHMS 
Sbjct: 378 GILKVVKGSLVVMKAKKVAANLYMLLGDTWQMADASV--AVGSQEETTMMWHRRLGHMSE 435

Query: 124 KGLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFPVSS 5
           +GL++L +       K   +PFC+ CV+ K  ++KF  S+
Sbjct: 436 RGLKVLAERNLIPGLKSVSLPFCEHCVISKQHRLKFAKST 475



 Score = 67.4 bits (163), Expect(2) = 5e-25
 Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
 Frame = -2

Query: 636 NFKQNEHANMASTSENV-----PDVFMVYENCADVNSVRSNSVCETEWLVDSGCTFHMTP 472
           N K  E ++ ASTS+        D  ++Y   A V++   N + +  W+VDSG T+HMTP
Sbjct: 246 NKKSGEKSSEASTSQGCVASTSDDGEVLYSEAA-VSTKGKNRLTDV-WIVDSGATWHMTP 303

Query: 471 FKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHVPD 316
            +  F  Y+ V  G+V + N     IVGIG V +K   G + TL+ VRHV +
Sbjct: 304 RRDWFCTYEPVSEGNVFMGNDHALEIVGIGTVKIKMYDGTIRTLQEVRHVKE 355


>gb|KYP36890.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 230

 Score = 77.8 bits (190), Expect(2) = 5e-25
 Identities = 36/96 (37%), Positives = 55/96 (57%)
 Frame = -1

Query: 301 GLMKILKGNLVIFKAVKRRNLYVCTAELESSLQNSVNAVCGSENDKTDLWHKRLGHMSAK 122
           G+M+I KG+ ++ + +K+ NLY+      + +  SV+       D T LWH RLGHMS +
Sbjct: 88  GVMEISKGSTIVIRGIKKGNLYMLQGST-NLISESVSVADKHTPDLTHLWHMRLGHMSER 146

Query: 121 GLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFP 14
           G+ +L K        +  + FC+ CV GKH K+KFP
Sbjct: 147 GMMVLSKQKLLEDHTVKELKFCEHCVFGKHHKIKFP 182



 Score = 65.1 bits (157), Expect(2) = 5e-25
 Identities = 26/65 (40%), Positives = 40/65 (61%)
 Frame = -2

Query: 510 WLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNV 331
           W++DSGC++HM P +  F  Y++   G V + N  +C  +GIG + +K   G + TL  V
Sbjct: 1   WVLDSGCSYHMCPNRSWFLTYEKKYGGDVFMGNDMECKTIGIGTIQIKMHDGVIKTLTEV 60

Query: 330 RHVPD 316
           RHVP+
Sbjct: 61  RHVPN 65


>gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 593

 Score = 74.7 bits (182), Expect(2) = 7e-25
 Identities = 35/96 (36%), Positives = 55/96 (57%)
 Frame = -1

Query: 301 GLMKILKGNLVIFKAVKRRNLYVCTAELESSLQNSVNAVCGSENDKTDLWHKRLGHMSAK 122
           G+M+I KG+ ++ + +K+ NLY+      + +  S++       D T LWH RLGHMS +
Sbjct: 353 GVMEINKGSTIVIRGIKKGNLYMLQGST-NLISESISVADKHTLDLTRLWHMRLGHMSER 411

Query: 121 GLEILQKNGYFGKDKLSCMPFCDSCVLGKHSKVKFP 14
           G+ +L K        +  + FC+ CVLGKH + KFP
Sbjct: 412 GMMVLSKQKLLRDHTVKELKFCEHCVLGKHHRSKFP 447



 Score = 67.8 bits (164), Expect(2) = 7e-25
 Identities = 35/117 (29%), Positives = 60/117 (51%)
 Frame = -2

Query: 666 RECPNKRGNQNFKQNEHANMASTSENVPDVFMVYENCADVNSVRSNSVCETEWLVDSGCT 487
           ++CP KR       N+ + + +  E+       +EN   ++ V ++     +W++DSGC+
Sbjct: 226 KDCPKKR-------NQKSVVVAAQEDSS-----FENELVLSIVDNHQHFVEQWVLDSGCS 273

Query: 486 FHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHVPD 316
           +HM P +  F  Y++   G V + N   C  + IG + +K   G + TL  VRHVPD
Sbjct: 274 YHMCPNRSWFLTYEKKFGGDVFMGNDMACKTISIGTIQIKMHDGVIRTLTEVRHVPD 330