BLASTX nr result
ID: Rehmannia29_contig00005462
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia29_contig00005462 (1363 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|PKU64612.1| integrator complex subunit 11 [Dendrobium catenatum] 598 0.0 gb|PKU79361.1| integrator complex subunit 11 [Dendrobium catenatum] 595 0.0 gb|PKA52309.1| integrator complex subunit 11 [Apostasia shenzhen... 586 0.0 gb|KYP34423.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanu... 590 0.0 gb|PKU74657.1| integrator complex subunit 11 [Dendrobium catenatum] 560 0.0 gb|AQK62700.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 558 0.0 gb|AQK92256.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 556 0.0 gb|AQK97087.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 558 0.0 gb|AQK46390.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 558 0.0 gb|AQK52011.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 558 0.0 gb|ONM11203.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 557 0.0 gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] 557 0.0 gb|AQK92235.1| Retrovirus-related Pol polyprotein LINE-1 [Zea ma... 556 0.0 gb|AQK92238.1| Retrovirus-related Pol polyprotein LINE-1 [Zea ma... 556 0.0 gb|ONM60488.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 557 0.0 gb|ONL97201.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 553 0.0 gb|AQK92237.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 556 0.0 gb|AQK47447.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 554 0.0 gb|AQK68857.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 550 0.0 gb|ONM02098.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 556 0.0 >gb|PKU64612.1| integrator complex subunit 11 [Dendrobium catenatum] Length = 477 Score = 598 bits (1541), Expect = 0.0 Identities = 277/436 (63%), Positives = 349/436 (80%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR S+LIPI+KNKGD Q+C NYRGIKL+ HT+KLWERVIE R+R +T++ NQFGFMPG Sbjct: 44 EWRMSVLIPIFKNKGDAQDCTNYRGIKLMCHTLKLWERVIEHRLRRDTNVSQNQFGFMPG 103 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAIHL R L E+Y K+DLHM+FIDLEKAYD+V R+++WRVLEK+G+ AYI I Sbjct: 104 RSTMEAIHLFRGLMEKYRGNKEDLHMIFIDLEKAYDKVPREVLWRVLEKKGVNNAYIQII 163 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY G TC++T G++ FP ++GLHQGSALSPYLF L++D +T+HLQ +P CMLFA Sbjct: 164 KDMYAGAITCVQTQGGLTKYFPISVGLHQGSALSPYLFALVMDVLTRHLQDDVPWCMLFA 223 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DDI+L+D+TREGV KLE+WR LESKGF +SR+KTEYMEC+FS N+ +E V + Sbjct: 224 DDILLVDKTREGVEGKLELWRSTLESKGFRLSRSKTEYMECNFSSNS-PSEGIVTLGDQV 282 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 ++ + F+YLGSI++ +GEI+ D+ RIQ GW KWR+AS +LCDR +PLKLKGKFYK + Sbjct: 283 INKSTRFRYLGSIVQSDGEIDGDIISRIQVGWLKWRNASGLLCDRNVPLKLKGKFYKMVV 342 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW K +H K+ VAEMRMLRWM G T DRIRNEHIR KVGVAP+++KIR Sbjct: 343 RPAMLYGAECWPLKEKHNNKLSVAEMRMLRWMSGFTLRDRIRNEHIREKVGVAPVEDKIR 402 Query: 1083 ETRLRWFGHVYRRPLDAPVRRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMA 1262 E+RLRWFGH+ RRP D PVRR+E + LT IK+GRGRPKKTW E I++D+ L++NEN+A Sbjct: 403 ESRLRWFGHIKRRPFDDPVRRVEVLD-LTYIKKGRGRPKKTWLENIRNDLSLLDLNENLA 461 Query: 1263 YDRKRWRDMIRTADPT 1310 ++R +WR I ADPT Sbjct: 462 FNRTQWRKRIHVADPT 477 >gb|PKU79361.1| integrator complex subunit 11 [Dendrobium catenatum] Length = 477 Score = 595 bits (1534), Expect = 0.0 Identities = 272/436 (62%), Positives = 351/436 (80%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR S+LIPI+KNKGD+Q+CANYRGIKL+ HT+KLWERV+E R+R +T++ NQFGFMPG Sbjct: 44 EWRMSVLIPIFKNKGDVQDCANYRGIKLMCHTLKLWERVMEHRLRRDTNVSQNQFGFMPG 103 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAIHL+R L E+Y E K+DLHM+FIDLEKAYD+V R+++WRVLEK+G+ AYI I Sbjct: 104 RSTMEAIHLLRGLMEKYRENKEDLHMIFIDLEKAYDKVPREVLWRVLEKKGVNNAYIQII 163 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY G TC++T G++ FP ++GLHQGSALSPYLF L++D +T+HLQ+ +P CMLFA Sbjct: 164 KDMYAGAITCVQTQGGLTKYFPISVGLHQGSALSPYLFALVMDVLTRHLQEDVPWCMLFA 223 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DDI+L+D+TREGV KLE+WR LESKGF +SR+KT+YMEC+FS +NR E V + Sbjct: 224 DDILLVDKTREGVEGKLELWRSTLESKGFRLSRSKTKYMECNFS-SNRPTEGIVTLGDQV 282 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 ++ + F+YLGSI++ +GEI+ D+ RIQ GW KWR+AS +LCDR +PLKLKGKFYK + Sbjct: 283 INKSTRFRYLGSIVQSDGEIDGDIISRIQVGWLKWRNASGLLCDRNVPLKLKGKFYKMVV 342 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAM+YGAECW K +H K+ V EMRMLRWM G T D+IRNEHI KVGVAP+++KIR Sbjct: 343 RPAMIYGAECWPLKEKHNTKLSVTEMRMLRWMSGFTLRDKIRNEHIHEKVGVAPVEDKIR 402 Query: 1083 ETRLRWFGHVYRRPLDAPVRRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMA 1262 E+RLRWFGH+ RRP D PVRR+E + LT IK+GRGRPKKTW E I++D+ L++N+N+ Sbjct: 403 ESRLRWFGHIKRRPFDDPVRRVEVLD-LTYIKKGRGRPKKTWLENIRNDLSLLDLNKNLT 461 Query: 1263 YDRKRWRDMIRTADPT 1310 ++R +WR I ADPT Sbjct: 462 FNRTQWRKRIHVADPT 477 >gb|PKA52309.1| integrator complex subunit 11 [Apostasia shenzhenica] Length = 513 Score = 586 bits (1511), Expect = 0.0 Identities = 271/436 (62%), Positives = 349/436 (80%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWRKSIL+PIYKNKGD+QN ANYRGIKL+SHT+KLWERVIE R+R+ T + +NQFGFMPG Sbjct: 79 EWRKSILVPIYKNKGDVQNYANYRGIKLMSHTLKLWERVIEQRLRHNTKVSENQFGFMPG 138 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RSTIEAIHL+R L E++ ERK++LH+VFIDLEKAYD+V+R+++WRVLEK+ I AYI I Sbjct: 139 RSTIEAIHLLRSLIEKFKERKENLHLVFIDLEKAYDKVSREVLWRVLEKKEICTAYIQVI 198 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY+G T +RT G++ +FP T+GLHQGS+LSPYLF LI++ +T H+Q +P CMLFA Sbjct: 199 KDMYEGAVTSVRTQGGLTKDFPITVGLHQGSSLSPYLFALIMEVMTGHIQDEVPWCMLFA 258 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DDIVLI++T+EG AKLE+WR ALESKG +SR+KTEYMEC FS+ V I Sbjct: 259 DDIVLIEKTKEGAKAKLELWRNALESKGLHLSRSKTEYMECTFSQERNTYIGDVTIGDQI 318 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V ++ F+YLGSII+ +GEI+ DV RIQAGW KWR+AS +LCDRKI K+KGKFYK + Sbjct: 319 VKKSERFRYLGSIIQNDGEIDNDVISRIQAGWVKWRNASGVLCDRKISSKIKGKFYKNIV 378 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 R AM+YGAECW K +H K+ V EMRMLRWMCG+TR DR+RNE+IR KVGVAPI++K+R Sbjct: 379 RQAMIYGAECWPAKKKHTNKINVTEMRMLRWMCGYTRKDRMRNEYIRKKVGVAPIEDKLR 438 Query: 1083 ETRLRWFGHVYRRPLDAPVRRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMA 1262 E+RLRWF H+ RRP++APVR++E + ++RG+GRPKKTW+E I+ D+ YL +++N+ Sbjct: 439 ESRLRWFEHLNRRPIEAPVRKIELLD-FAHVQRGKGRPKKTWQETIRSDLSYLNLDKNLV 497 Query: 1263 YDRKRWRDMIRTADPT 1310 DR +W+ I A+PT Sbjct: 498 TDRAQWKQRIHVANPT 513 >gb|KYP34423.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan] Length = 819 Score = 590 bits (1522), Expect = 0.0 Identities = 278/436 (63%), Positives = 342/436 (78%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S LIPIYKNKGDIQ+CANYRGIKL+SHTMKLWERVIE R+R ET + +NQFGFMPG Sbjct: 385 EWRRSTLIPIYKNKGDIQDCANYRGIKLMSHTMKLWERVIERRLRQETQVTENQFGFMPG 444 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI+L+RRL EQY +++DLHMVF+DLEKAYDRV R ++W LEK+G++IAYI AI Sbjct: 445 RSTMEAIYLLRRLMEQYRTQQKDLHMVFVDLEKAYDRVPRQVLWEALEKKGVRIAYIRAI 504 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY+G T +RT +G+S +FP TIGLHQGS LSPYLF L++D +T+H+Q+ +P CMLFA Sbjct: 505 KDMYEGAKTSVRTQSGVSEDFPITIGLHQGSTLSPYLFTLVMDALTEHVQEPVPRCMLFA 564 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DDIVL ++RE +N K+E WR+ALE G ISR+KTEYMEC FS N +VKI Sbjct: 565 DDIVLTGDSREEINEKIERWRQALEEHGLRISRSKTEYMECKFSMRNTRATQEVKIGEQA 624 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 ++ FKYLGSI++++ E+ DV HRIQAGW KWR AS +LCD+K+PLKLKGKFY+TA+ Sbjct: 625 ITKVPRFKYLGSIVQQDAELEGDVHHRIQAGWMKWRRASGVLCDKKVPLKLKGKFYRTAV 684 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPA+LYG ECWA K +HE K+ VAEMRMLRWMCGHT DRIRNE IR VGVA I EK+ Sbjct: 685 RPAILYGTECWAAKGKHENKLHVAEMRMLRWMCGHTIKDRIRNECIRESVGVALIVEKLV 744 Query: 1083 ETRLRWFGHVYRRPLDAPVRRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMA 1262 E+RLRWFGHV+RRP DAPVRR++ E+ +R RGRP+KT E + DM ++ M Sbjct: 745 ESRLRWFGHVWRRPADAPVRRVDEMEATVGARR-RGRPRKTIGETVLKDMEINALSREMI 803 Query: 1263 YDRKRWRDMIRTADPT 1310 YDR WR +I ADPT Sbjct: 804 YDRSLWRRLIHIADPT 819 >gb|PKU74657.1| integrator complex subunit 11 [Dendrobium catenatum] Length = 447 Score = 560 bits (1444), Expect = 0.0 Identities = 261/400 (65%), Positives = 326/400 (81%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR S+LIPI+KNKGD Q+CANYRGIKL+ HT+KLWERV+E R+R +T++ NQFGFMPG Sbjct: 44 EWRMSMLIPIFKNKGDAQDCANYRGIKLMCHTLKLWERVMEHRLRRDTNVSQNQFGFMPG 103 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAIHL+R L E+Y E K+DLHM+FIDLEKAYD+V R+++WRVLEK+G+ AYI I Sbjct: 104 RSTMEAIHLLRGLMEKYRENKEDLHMIFIDLEKAYDKVPREVLWRVLEKKGVNNAYIQII 163 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY G TC++T G++ FP ++GLHQGSALSPYLF L++D +T+HLQ +P CMLFA Sbjct: 164 KDMYAGAITCVQTQGGLTKYFPISVGLHQGSALSPYLFALVMDVLTRHLQDDVPWCMLFA 223 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DDI+L+D+TREGV KLE+WR LESKGF +SR+KTEYMEC+FS +NR E V + Sbjct: 224 DDILLVDKTREGVEGKLELWRSTLESKGFRLSRSKTEYMECNFS-SNRPTEGIVTLGDQV 282 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 ++ + F+YLGSI++ +GEI+ D+ RIQ GW KWR+AS +LCDR +PLKLKGKFYK + Sbjct: 283 INKSTRFRYLGSIVQSDGEIDGDIISRIQVGWLKWRNASGLLCDRNVPLKLKGKFYKMVV 342 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW K +H K+RVAEMRMLRWM G T DRIRNEHIR KVGVAP+++KIR Sbjct: 343 RPAMLYGAECWPLKEKHNTKLRVAEMRMLRWMSGFTLRDRIRNEHIREKVGVAPVEDKIR 402 Query: 1083 ETRLRWFGHVYRRPLDAPVRRLEGRESLTQIKRGRGRPKK 1202 E+RLRWFGH+ RRP D PVRR+E + LT +K+GRGRPKK Sbjct: 403 ESRLRWFGHIKRRPSDDPVRRVEVLD-LTCVKKGRGRPKK 441 >gb|AQK62700.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 436 Score = 558 bits (1439), Expect = 0.0 Identities = 263/440 (59%), Positives = 338/440 (76%), Gaps = 5/440 (1%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWERVIE R+R TS+ NQFGFMPG Sbjct: 4 EWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPG 63 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V R +MW LEK + YI+ I Sbjct: 64 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 123 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY + T +RT G + +FP IGLHQGSALSPYLF L+IDE+T+ +Q +P CMLFA Sbjct: 124 KDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFA 183 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DD+VLI+E+R GV+ KLE+WR+ LE+KGF +SR+KTEYM+C FS + V +DG Sbjct: 184 DDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMG-YEDGDVSLDGQV 242 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V +F+YLGS++++ G+I++DV+HRI+AGW KWR A+ +LCD ++P KLKGKFY+TAI Sbjct: 243 VPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPRKLKGKFYRTAI 302 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW TK H Q++ VAEMRMLRW+CGHTR DR+RN+ IR +VGVAPI+EK+ Sbjct: 303 RPAMLYGAECWPTKRRHVQQLSVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLM 362 Query: 1083 ETRLRWFGHVYRRPLDAPV-----RRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEI 1247 + RLRWFGH+ RRP +APV RR E +KRGRGRP TW EA+K D+ I Sbjct: 363 QHRLRWFGHIQRRPEEAPVHIGIIRRPE------NVKRGRGRPTLTWTEAVKRDLKEWNI 416 Query: 1248 NENMAYDRKRWRDMIRTADP 1307 ++ +A DRK W+ I +P Sbjct: 417 DKELAADRKGWKCAIHVPEP 436 >gb|AQK92256.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 476 Score = 556 bits (1433), Expect = 0.0 Identities = 263/440 (59%), Positives = 339/440 (77%), Gaps = 5/440 (1%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWERVIE R+R TS+ NQFGFMPG Sbjct: 44 EWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPG 103 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V R +MW LEK + YI+ I Sbjct: 104 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 163 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY + T +RT G + +FP IGLHQGSALSPYLF L+IDE+T+ +Q IP CMLFA Sbjct: 164 KDMYSNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFA 223 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DD+VLI+E+R GV+ KLE+WR+ LE+KGF +SR+KTEYM+C FS + V +DG Sbjct: 224 DDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMG-YEDGDVSLDGQV 282 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V +F+YLGS+++++G+I++DV+HRI+AGW KWR A+ +LCD ++P KLKGKFY+TAI Sbjct: 283 VPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTAI 342 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW TK H Q++ VAEMRMLRW+CGHTR DR+RN+ IR +VGVAPI+EK+ Sbjct: 343 RPAMLYGAECWPTKRRHVQQLCVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLM 402 Query: 1083 ETRLRWFGHVYRRPLDAPV-----RRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEI 1247 + RLRWFGH+ RR +APV RR E +KRGRGRP TW EA+K D+ +I Sbjct: 403 QHRLRWFGHIQRRSDEAPVHIGIIRRPE------NVKRGRGRPTLTWTEAVKRDLKEWKI 456 Query: 1248 NENMAYDRKRWRDMIRTADP 1307 ++ +A DRK W+ I +P Sbjct: 457 DKELAVDRKGWKCAIHVPEP 476 >gb|AQK97087.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 557 Score = 558 bits (1439), Expect = 0.0 Identities = 263/440 (59%), Positives = 338/440 (76%), Gaps = 5/440 (1%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWERVIE R+R TS+ NQFGFMPG Sbjct: 125 EWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPG 184 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V R +MW LEK + YI+ I Sbjct: 185 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 244 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY + T +RT G + +FP IGLHQGSALSPYLF L+IDE+T+ +Q +P CMLFA Sbjct: 245 KDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFA 304 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DD+VLI+E+R GV+ KLE+WR+ LE+KGF +SR+KTEYM+C FS + V +DG Sbjct: 305 DDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMG-YEDGDVSLDGQV 363 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V +F+YLGS++++ G+I++DV+HRI+AGW KWR A+ +LCD ++P KLKGKFY+TAI Sbjct: 364 VPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPRKLKGKFYRTAI 423 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW TK H Q++ VAEMRMLRW+CGHTR DR+RN+ IR +VGVAPI+EK+ Sbjct: 424 RPAMLYGAECWPTKRRHVQQLSVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLM 483 Query: 1083 ETRLRWFGHVYRRPLDAPV-----RRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEI 1247 + RLRWFGH+ RRP +APV RR E +KRGRGRP TW EA+K D+ I Sbjct: 484 QHRLRWFGHIQRRPEEAPVHIGIIRRPE------NVKRGRGRPTLTWTEAVKRDLKEWNI 537 Query: 1248 NENMAYDRKRWRDMIRTADP 1307 ++ +A DRK W+ I +P Sbjct: 538 DKELAADRKGWKCAIHVPEP 557 >gb|AQK46390.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 557 Score = 558 bits (1439), Expect = 0.0 Identities = 264/440 (60%), Positives = 339/440 (77%), Gaps = 5/440 (1%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWERVIE R+R TS+ NQFGFMPG Sbjct: 125 EWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKLTSVTQNQFGFMPG 184 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V R +MW LEK + YI+ I Sbjct: 185 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 244 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY + T +RT G + +FP IGLHQGSALSPYLF L+IDE+T+ +Q IP CMLFA Sbjct: 245 KDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFA 304 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DD+VLI+E+R GV+ KLE+WR+ LE+KGF +SR+KTEYM+C FS + V +DG Sbjct: 305 DDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMG-YEDGDVSLDGQV 363 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V +F+YLGS+++++G+I++DV+HRI+AGW KWR A+ +LCD ++P KLKGKFY+TAI Sbjct: 364 VPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTAI 423 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW TK H Q++ VAEMRMLRW+CGHTR DR+RN+ IR +VGVAPI+EK+ Sbjct: 424 RPAMLYGAECWPTKRRHVQQLCVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLM 483 Query: 1083 ETRLRWFGHVYRRPLDAPV-----RRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEI 1247 + RLRWFGH+ RRP +APV RR E +KRGRGRP TW EA+K D+ I Sbjct: 484 QHRLRWFGHIQRRPEEAPVHIGIIRRPE------NVKRGRGRPTLTWTEAVKRDLKEWNI 537 Query: 1248 NENMAYDRKRWRDMIRTADP 1307 ++ +A DRK W+ I +P Sbjct: 538 DKELAVDRKGWKCAIHVPEP 557 >gb|AQK52011.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 557 Score = 558 bits (1437), Expect = 0.0 Identities = 263/440 (59%), Positives = 338/440 (76%), Gaps = 5/440 (1%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWERVIE R+R TS+ NQFGFMPG Sbjct: 125 EWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPG 184 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V R +MW LEK + YI+ I Sbjct: 185 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 244 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY + T +RT G + +FP IGLHQGSALSPYLF L+IDE+T+ +Q +P CMLFA Sbjct: 245 KDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFA 304 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DD+VLI+E+R GV+ KLE+WR+ LE+KGF +SR+KTEYM+C FS + V +DG Sbjct: 305 DDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMG-YEDGDVSLDGQV 363 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V +F+YLGS++++ G+I++DV+HRI+AGW KWR A+ +LCD ++P KLKGKFY+TAI Sbjct: 364 VPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPHKLKGKFYRTAI 423 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW TK H Q++ VAEMRMLRW+CGHTR DR+RN+ IR +VGVAPI+EK+ Sbjct: 424 RPAMLYGAECWPTKRRHVQQLSVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLM 483 Query: 1083 ETRLRWFGHVYRRPLDAPV-----RRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEI 1247 + RLRWFGH+ RRP +APV RR E +KRGRGRP TW EA+K D+ I Sbjct: 484 QHRLRWFGHIQRRPEEAPVHIGIIRRPE------NVKRGRGRPTLTWTEAVKRDLNEWNI 537 Query: 1248 NENMAYDRKRWRDMIRTADP 1307 ++ +A DRK W+ I +P Sbjct: 538 DKELAADRKGWKCAIHVPEP 557 >gb|ONM11203.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 557 Score = 557 bits (1436), Expect = 0.0 Identities = 262/440 (59%), Positives = 338/440 (76%), Gaps = 5/440 (1%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWERVIE R+R TS+ NQFGFMPG Sbjct: 125 EWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPG 184 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V R +MW LEK + YI+ + Sbjct: 185 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLM 244 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY + T +RT G + +FP IGLHQGSALSPYLF L+IDE+T+ +Q +P CMLFA Sbjct: 245 KDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFA 304 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DD+VLI+E+R GV+ KLE+WR+ LE+KGF +SR+KTEYM+C FS + V +DG Sbjct: 305 DDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMG-YEDGDVSLDGQV 363 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V +F+YLGS++++ G+I++DV+HRI+AGW KWR A+ +LCD ++P KLKGKFY+TAI Sbjct: 364 VPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPRKLKGKFYRTAI 423 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW TK H Q++ VAEMRMLRW+CGHTR DR+RN+ IR +VGVAPI+EK+ Sbjct: 424 RPAMLYGAECWPTKRRHVQQLSVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLM 483 Query: 1083 ETRLRWFGHVYRRPLDAPV-----RRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEI 1247 + RLRWFGH+ RRP +APV RR E +KRGRGRP TW EA+K D+ I Sbjct: 484 QHRLRWFGHIQRRPEEAPVHIGIIRRPE------NVKRGRGRPTLTWTEAVKRDLKEWNI 537 Query: 1248 NENMAYDRKRWRDMIRTADP 1307 ++ +A DRK W+ I +P Sbjct: 538 DKELAADRKGWKCAIHVPEP 557 >gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] Length = 562 Score = 557 bits (1436), Expect = 0.0 Identities = 265/404 (65%), Positives = 326/404 (80%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWRKS L+PIYKNKGDIQ+C NYRGIKL++HTMKLWERVIE +R ET + +NQFGFM G Sbjct: 109 EWRKSTLVPIYKNKGDIQSCENYRGIKLMTHTMKLWERVIERGLRKETQVTENQFGFMSG 168 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RS EAI+L+RR+ E+Y K+DLHMVFIDLEKAYDRV R+++W+VLEK ++IAYI AI Sbjct: 169 RSITEAIYLLRRMMERYRSNKRDLHMVFIDLEKAYDRVPREVLWKVLEKMRVRIAYIRAI 228 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMYDG TT ++T G++ EFP IGLHQGS+LSPYLF ++++ +T+H+Q+ +P C+LFA Sbjct: 229 KDMYDGATTSVKTQGGVTEEFPIGIGLHQGSSLSPYLFTIVLEVLTEHIQEPVPWCILFA 288 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DDIVL+ E RE +N KLE+W+EALE G ISR+KTEYMEC FS N +V+I + Sbjct: 289 DDIVLMGELREDLNKKLELWKEALEVYGLRISRSKTEYMECKFSLRRENTNIEVEIGENI 348 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 + KSFKYLG II++NGEI +DV HRIQAGW+KWRSAS +CD+K+PLKLKGKFY+TAI Sbjct: 349 LRKVKSFKYLGCIIQDNGEIEQDVNHRIQAGWSKWRSASGFICDKKVPLKLKGKFYRTAI 408 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYG EC A K EHE K+ VAE++MLRWM GHTRLD+IRNE IR +VGVAPI EKI Sbjct: 409 RPAMLYGTECCAAKGEHEHKLSVAEVKMLRWMSGHTRLDKIRNEDIRERVGVAPIVEKIV 468 Query: 1083 ETRLRWFGHVYRRPLDAPVRRLEGRESLTQIKRGRGRPKKTWKE 1214 E+RLRWFGHV RRP++ PVRR++ E Q +GRGRPKKT E Sbjct: 469 ESRLRWFGHVRRRPIEHPVRRVDEMED-GQRAKGRGRPKKTIHE 511 >gb|AQK92235.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] gb|AQK92242.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] gb|AQK92249.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] gb|AQK92250.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] gb|AQK92262.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 576 Score = 556 bits (1433), Expect = 0.0 Identities = 263/440 (59%), Positives = 339/440 (77%), Gaps = 5/440 (1%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWERVIE R+R TS+ NQFGFMPG Sbjct: 144 EWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPG 203 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V R +MW LEK + YI+ I Sbjct: 204 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 263 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY + T +RT G + +FP IGLHQGSALSPYLF L+IDE+T+ +Q IP CMLFA Sbjct: 264 KDMYSNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFA 323 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DD+VLI+E+R GV+ KLE+WR+ LE+KGF +SR+KTEYM+C FS + V +DG Sbjct: 324 DDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMG-YEDGDVSLDGQV 382 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V +F+YLGS+++++G+I++DV+HRI+AGW KWR A+ +LCD ++P KLKGKFY+TAI Sbjct: 383 VPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTAI 442 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW TK H Q++ VAEMRMLRW+CGHTR DR+RN+ IR +VGVAPI+EK+ Sbjct: 443 RPAMLYGAECWPTKRRHVQQLCVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLM 502 Query: 1083 ETRLRWFGHVYRRPLDAPV-----RRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEI 1247 + RLRWFGH+ RR +APV RR E +KRGRGRP TW EA+K D+ +I Sbjct: 503 QHRLRWFGHIQRRSDEAPVHIGIIRRPE------NVKRGRGRPTLTWTEAVKRDLKEWKI 556 Query: 1248 NENMAYDRKRWRDMIRTADP 1307 ++ +A DRK W+ I +P Sbjct: 557 DKELAVDRKGWKCAIHVPEP 576 >gb|AQK92238.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] gb|AQK92243.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] gb|AQK92246.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] gb|AQK92251.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] gb|AQK92259.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] gb|AQK92260.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] gb|AQK92261.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 591 Score = 556 bits (1433), Expect = 0.0 Identities = 263/440 (59%), Positives = 339/440 (77%), Gaps = 5/440 (1%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWERVIE R+R TS+ NQFGFMPG Sbjct: 159 EWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPG 218 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V R +MW LEK + YI+ I Sbjct: 219 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 278 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY + T +RT G + +FP IGLHQGSALSPYLF L+IDE+T+ +Q IP CMLFA Sbjct: 279 KDMYSNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFA 338 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DD+VLI+E+R GV+ KLE+WR+ LE+KGF +SR+KTEYM+C FS + V +DG Sbjct: 339 DDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMG-YEDGDVSLDGQV 397 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V +F+YLGS+++++G+I++DV+HRI+AGW KWR A+ +LCD ++P KLKGKFY+TAI Sbjct: 398 VPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTAI 457 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW TK H Q++ VAEMRMLRW+CGHTR DR+RN+ IR +VGVAPI+EK+ Sbjct: 458 RPAMLYGAECWPTKRRHVQQLCVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLM 517 Query: 1083 ETRLRWFGHVYRRPLDAPV-----RRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEI 1247 + RLRWFGH+ RR +APV RR E +KRGRGRP TW EA+K D+ +I Sbjct: 518 QHRLRWFGHIQRRSDEAPVHIGIIRRPE------NVKRGRGRPTLTWTEAVKRDLKEWKI 571 Query: 1248 NENMAYDRKRWRDMIRTADP 1307 ++ +A DRK W+ I +P Sbjct: 572 DKELAVDRKGWKCAIHVPEP 591 >gb|ONM60488.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 638 Score = 557 bits (1436), Expect = 0.0 Identities = 262/440 (59%), Positives = 338/440 (76%), Gaps = 5/440 (1%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWERVIE R+R TS+ NQFGFMPG Sbjct: 206 EWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPG 265 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V R +MW LEK + YI+ I Sbjct: 266 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 325 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY + T +RT G + +FP IGLHQGSALSPYLF L+IDE+T+ +Q +P CMLFA Sbjct: 326 KDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFA 385 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DD+VLI+E+R GV+ KLE+WR+ LE+KGF +SR+KTEYM+C FS + V +DG Sbjct: 386 DDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMG-YEDGDVSLDGQV 444 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V +F+YLGS++++ G+I++DV+HRI+AGW KWR A+ +LCD ++P KLKGKFY+TAI Sbjct: 445 VPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPRKLKGKFYRTAI 504 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW TK H Q++ VAEMRMLRW+CGHTR DR+RN+ IR +VGVAPI+EK+ Sbjct: 505 RPAMLYGAECWPTKRRHVQQLSVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLM 564 Query: 1083 ETRLRWFGHVYRRPLDAPV-----RRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEI 1247 + RLRWFGH+ RRP +APV RR E +KRGRGRP TW E++K D+ I Sbjct: 565 QHRLRWFGHIQRRPEEAPVHIGIIRRPE------NVKRGRGRPTLTWTESVKRDLKEWNI 618 Query: 1248 NENMAYDRKRWRDMIRTADP 1307 ++ +A DRK W+ I +P Sbjct: 619 DKELAADRKGWKCAIHVPEP 638 >gb|ONL97201.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 557 Score = 553 bits (1425), Expect = 0.0 Identities = 261/440 (59%), Positives = 336/440 (76%), Gaps = 5/440 (1%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWERVIE R+R TS+ NQFGFMPG Sbjct: 125 EWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPG 184 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V R +MW LEK + YI+ I Sbjct: 185 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 244 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY + T +RT G + +FP IGLHQGSALSPYLF L+IDE+T+ +Q +P CMLFA Sbjct: 245 KDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFA 304 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DD+VLI+E+R GV+ KLE+WR+ LE+KGF +SR+KTEYM+C FS + V +DG Sbjct: 305 DDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMG-YEDGDVSLDGQV 363 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V +F+YLGS++++ G+I++DV+HRI+ GW KWR A+ +LCD ++P KLKGKFY+TAI Sbjct: 364 VPKKDTFRYLGSMLQKEGDIDEDVSHRIKVGWLKWRQAAGVLCDPRVPRKLKGKFYRTAI 423 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW TK H Q++ VAEMRML W+CGHTR DR+RN+ IR +VGVAPI+EK+ Sbjct: 424 RPAMLYGAECWPTKRRHVQQLSVAEMRMLCWICGHTRRDRVRNDDIRERVGVAPIEEKLM 483 Query: 1083 ETRLRWFGHVYRRPLDAPV-----RRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEI 1247 + RLRWFGH+ RRP +APV RR E +KRGRGRP TW EA+K D+ I Sbjct: 484 QHRLRWFGHIQRRPEEAPVHIGIIRRPE------NVKRGRGRPTLTWTEAVKRDLKEWNI 537 Query: 1248 NENMAYDRKRWRDMIRTADP 1307 ++ +A DRK W+ I +P Sbjct: 538 DKELAADRKGWKCAIHVPEP 557 >gb|AQK92237.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 712 Score = 556 bits (1433), Expect = 0.0 Identities = 263/440 (59%), Positives = 339/440 (77%), Gaps = 5/440 (1%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWERVIE R+R TS+ NQFGFMPG Sbjct: 280 EWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPG 339 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V R +MW LEK + YI+ I Sbjct: 340 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 399 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY + T +RT G + +FP IGLHQGSALSPYLF L+IDE+T+ +Q IP CMLFA Sbjct: 400 KDMYSNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFA 459 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DD+VLI+E+R GV+ KLE+WR+ LE+KGF +SR+KTEYM+C FS + V +DG Sbjct: 460 DDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMG-YEDGDVSLDGQV 518 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V +F+YLGS+++++G+I++DV+HRI+AGW KWR A+ +LCD ++P KLKGKFY+TAI Sbjct: 519 VPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTAI 578 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW TK H Q++ VAEMRMLRW+CGHTR DR+RN+ IR +VGVAPI+EK+ Sbjct: 579 RPAMLYGAECWPTKRRHVQQLCVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLM 638 Query: 1083 ETRLRWFGHVYRRPLDAPV-----RRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEI 1247 + RLRWFGH+ RR +APV RR E +KRGRGRP TW EA+K D+ +I Sbjct: 639 QHRLRWFGHIQRRSDEAPVHIGIIRRPE------NVKRGRGRPTLTWTEAVKRDLKEWKI 692 Query: 1248 NENMAYDRKRWRDMIRTADP 1307 ++ +A DRK W+ I +P Sbjct: 693 DKELAVDRKGWKCAIHVPEP 712 >gb|AQK47447.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 657 Score = 554 bits (1427), Expect = 0.0 Identities = 262/440 (59%), Positives = 337/440 (76%), Gaps = 5/440 (1%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWERVIE R+R TS+ NQFGFMPG Sbjct: 225 EWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPG 284 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V R +MW LEK + YI+ I Sbjct: 285 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 344 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY + T +RT G + +FP IGLHQGSALSPYLF L+IDE+T+ +Q +P CMLFA Sbjct: 345 KDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFA 404 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DD+VLI+E+R GV+ KLE+WR+ LE+KGF +SR+KTEYM+C FS + V +DG Sbjct: 405 DDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMG-YEDGDVSLDGQV 463 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V +F+YLGS++++ G+I++DV+HRI+AGW KWR A+ +LCD ++P KLKGKFY+TAI Sbjct: 464 VPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPRKLKGKFYRTAI 523 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW TK H Q++ VAEMRMLRW+ GHTR DR+RN+ IR +VGVAPI+EK+ Sbjct: 524 RPAMLYGAECWPTKRRHVQQLSVAEMRMLRWIGGHTRRDRVRNDDIRERVGVAPIEEKLM 583 Query: 1083 ETRLRWFGHVYRRPLDAPV-----RRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEI 1247 + RLRWFGH+ RRP +APV RR E +KRGRGRP TW EA+K D+ I Sbjct: 584 QHRLRWFGHIQRRPEEAPVHIGIIRRPE------NVKRGRGRPTLTWTEAVKRDLKEWNI 637 Query: 1248 NENMAYDRKRWRDMIRTADP 1307 ++ +A DRK W+ I +P Sbjct: 638 DKELAADRKGWKCAIHVPEP 657 >gb|AQK68857.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 557 Score = 550 bits (1416), Expect = 0.0 Identities = 260/440 (59%), Positives = 336/440 (76%), Gaps = 5/440 (1%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S L+ I+KNKGD+Q+C NYRGIKL+SHTMKLWERVIE R+R TS+ NQFGFMPG Sbjct: 125 EWRRSTLVSIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPG 184 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V R +MW LEK + YI+ I Sbjct: 185 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVSTKYINLI 244 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY + T +RT G + +FP IGLHQGSALSPYLF L+IDE+T+ +Q I CMLFA Sbjct: 245 KDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDILWCMLFA 304 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DD+VLI+E+R GV+ KLE+WR+ LE+KGF +SR+KTEYM+C FS + V +DG Sbjct: 305 DDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMG-YEDGDVSLDGQV 363 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V +F+YLGS++++ G+I++DV+HRI+AGW KW+ A+ +LCD ++P KLKGKFY+TAI Sbjct: 364 VPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWQQAAGVLCDPRVPHKLKGKFYRTAI 423 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW+TK H Q++ VAEM MLRW+CGHTR DR+RN+ IR +VGVAPI+EK+ Sbjct: 424 RPAMLYGAECWSTKRRHVQQLSVAEMCMLRWLCGHTRRDRVRNDDIRERVGVAPIEEKLM 483 Query: 1083 ETRLRWFGHVYRRPLDAPV-----RRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEI 1247 + RLRWFGH+ RRP +APV RR E +KRGRGRP TW EA+K D+ L I Sbjct: 484 QHRLRWFGHIQRRPEEAPVHIGIIRRPE------NVKRGRGRPTLTWTEAVKRDLKELNI 537 Query: 1248 NENMAYDRKRWRDMIRTADP 1307 ++ + DRK W+ I +P Sbjct: 538 DKELVVDRKGWKCAIHMPEP 557 >gb|ONM02098.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 742 Score = 556 bits (1432), Expect = 0.0 Identities = 262/440 (59%), Positives = 337/440 (76%), Gaps = 5/440 (1%) Frame = +3 Query: 3 EWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPG 182 EWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWERVIE R+R TS+ NQFGFMPG Sbjct: 310 EWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPG 369 Query: 183 RSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAI 362 RST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V R +MW LEK + YI+ I Sbjct: 370 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 429 Query: 363 KDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFA 542 KDMY + T +RT G + +FP IGLHQGSALSPYLF L+IDE+T+ +Q +P CMLFA Sbjct: 430 KDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFA 489 Query: 543 DDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHE 722 DD+VLI+E+R GV+ KLE+WR+ LE+KGF +SR+KTEYM+C FS + V +DG Sbjct: 490 DDVVLIEESRSGVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMG-YEDGDVSLDGQV 548 Query: 723 VSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAI 902 V +F+YLGS++++ G+I++DV+HRI+AGW KWR A+ +LCD ++P KLK KFY+TAI Sbjct: 549 VPKKDTFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHRVPRKLKDKFYRTAI 608 Query: 903 RPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIR 1082 RPAMLYGAECW TK H Q++ VAEMRMLRW+CGHTR DR+RN+ IR +VGVAPI+EK+ Sbjct: 609 RPAMLYGAECWPTKRRHVQQLSVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLM 668 Query: 1083 ETRLRWFGHVYRRPLDAPV-----RRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEI 1247 + RLRWFGH+ RRP +APV RR E +KRGRGRP TW EA+K D+ I Sbjct: 669 QHRLRWFGHIQRRPEEAPVHIGIIRRPE------NVKRGRGRPTLTWTEAVKRDLKEWNI 722 Query: 1248 NENMAYDRKRWRDMIRTADP 1307 ++ +A DRK W+ I +P Sbjct: 723 DKELAADRKGWKCAIHVPEP 742