BLASTX nr result
ID: Rehmannia29_contig00005412
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00005412
(889 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 67 2e-08
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a... 65 4e-08
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 65 4e-08
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 65 4e-08
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 65 4e-08
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 65 4e-08
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 65 4e-08
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 65 4e-08
gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus] 65 4e-08
gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica m... 65 4e-08
gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica m... 65 4e-08
gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica m... 65 4e-08
gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica m... 65 4e-08
gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus] 65 4e-08
emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica ... 65 4e-08
dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica ... 65 4e-08
dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica ... 65 4e-08
gb|AVL84357.1| RNA-dependent RNA polymerase [Plantago asiatica m... 65 4e-08
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] >gi|... 64 1e-07
gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica m... 64 1e-07
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 66.6 bits (161), Expect = 2e-08
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG E
Sbjct: 1301 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDE 1336
>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 644 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 679
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1348
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1348
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1348
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1348
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1348
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1348
>gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1348
>gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1348
>gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1348
>gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1348
>gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
gb|AMY62708.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1348
>gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1348
>emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1348
>dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1320 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1355
>dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAISNV+ANYSLDA+LAYSLG +
Sbjct: 1320 LELAKAQKKAGVKDAISNVVANYSLDARLAYSLGDD 1355
>gb|AVL84357.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1388
Score = 65.5 bits (158), Expect = 4e-08
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1321 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDD 1356
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase
emb|CAA79761.1| 156K-protein [Plantago asiatica mosaic virus]
Length = 1385
Score = 64.3 bits (155), Expect = 1e-07
Identities = 31/36 (86%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQKKAGV+DAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1318 LELAKAQKKAGVRDAITNVVANYSLDAKLAYSLGDD 1353
>gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 64.3 bits (155), Expect = 1e-07
Identities = 31/36 (86%), Positives = 35/36 (97%)
Frame = +3
Query: 3 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGGE 110
LELAKAQ+KAGVKDAI+NV+ANYSLDAKLAYSLG +
Sbjct: 1320 LELAKAQRKAGVKDAIANVVANYSLDAKLAYSLGDD 1355