BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00005375
         (2069 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011086680.1| RNA polymerase sigma factor sigB [Sesamum in...   795   0.0  
gb|PIN25165.1| hypothetical protein CDL12_02108 [Handroanthus im...   773   0.0  
ref|XP_012849681.1| PREDICTED: RNA polymerase sigma factor sigB ...   695   0.0  
ref|XP_022859059.1| RNA polymerase sigma factor sigB-like [Olea ...   669   0.0  
ref|XP_022896521.1| RNA polymerase sigma factor sigB-like [Olea ...   659   0.0  
ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-...   625   0.0  
ref|XP_019224549.1| PREDICTED: RNA polymerase sigma factor sigB-...   620   0.0  
ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-...   619   0.0  
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ...   616   0.0  
ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB ...   616   0.0  
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB ...   614   0.0  
ref|XP_015061066.1| PREDICTED: RNA polymerase sigma factor sigB ...   613   0.0  
ref|XP_017977747.1| PREDICTED: RNA polymerase sigma factor sigB ...   611   0.0  
ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB ...   609   0.0  
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB ...   610   0.0  
ref|XP_021283422.1| RNA polymerase sigma factor sigB [Herrania u...   608   0.0  
ref|XP_010097670.1| RNA polymerase sigma factor sigB [Morus nota...   606   0.0  
ref|XP_017977746.1| PREDICTED: RNA polymerase sigma factor sigB ...   605   0.0  
ref|XP_023885428.1| RNA polymerase sigma factor sigB [Quercus su...   604   0.0  
gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]        604   0.0  

>ref|XP_011086680.1| RNA polymerase sigma factor sigB [Sesamum indicum]
          Length = 613

 Score =  795 bits (2054), Expect = 0.0
 Identities = 427/591 (72%), Positives = 452/591 (76%)
 Frame = +2

Query: 2    SHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXXMLEFEELKLSPLEAIPNSVPADRXX 181
            SH  V SSK+R + +FRTQCI              +L+FE+L+LS LEAIPN VPADR  
Sbjct: 23   SHTSVYSSKSREATSFRTQCILSTTPPPTLTATTTVLDFEKLQLSSLEAIPNQVPADRSW 82

Query: 182  XXXXXXXXXXMLDLEKLPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSX 361
                      MLDLE LPSLDAHPI+ A NKP  YVGA  PPSEV LGAN D ETLLTS 
Sbjct: 83   STPTSSAKTAMLDLEGLPSLDAHPITTAANKPWTYVGAIAPPSEVTLGANLDTETLLTSE 142

Query: 362  XXXXXXXXXXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAH 541
                                      MMVSHHK TK +S+ TG+  +V+T + EK+QLAH
Sbjct: 143  EAVIAAAASEALALAKAAVKVAKDAAMMVSHHKPTKSNSSATGMFADVNTPIFEKNQLAH 202

Query: 542  LAERVVVREPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTX 721
            LAERV +R+ KVAE+GLGE  PA+  L ESDDVEPSAEELEFLEAQL+KSIAVRSKRQT 
Sbjct: 203  LAERVDIRDAKVAEVGLGENYPAAHSLTESDDVEPSAEELEFLEAQLSKSIAVRSKRQTE 262

Query: 722  XXXXXXXXXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQ 901
                          NI                QDVDY+DP                 EEQ
Sbjct: 263  RRARRTRAAEKAAANIVSVKSGSSSRKKRSAVQDVDYSDPLRYLRGTTSSSRLLTASEEQ 322

Query: 902  VLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKS 1081
            VLS GIQVLLKLERLQ ELT+R GG PTF+QWAAAAGVD +TLRKQINYGILCKDKMIKS
Sbjct: 323  VLSSGIQVLLKLERLQMELTQRYGGQPTFAQWAAAAGVDQKTLRKQINYGILCKDKMIKS 382

Query: 1082 NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS 1261
            NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS
Sbjct: 383  NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS 442

Query: 1262 LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPK 1441
            LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR PDDEEVAEATGLSMKRLSAVMLTPK
Sbjct: 443  LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVMLTPK 502

Query: 1442 APRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWR 1621
            APRSLDQKIGINQDLKPSDVIADPEAET+EDLLIKQFMKQDLAKVLDSLNPREKQVV WR
Sbjct: 503  APRSLDQKIGINQDLKPSDVIADPEAETAEDLLIKQFMKQDLAKVLDSLNPREKQVVIWR 562

Query: 1622 FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMP 1774
            FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMP
Sbjct: 563  FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMP 613


>gb|PIN25165.1| hypothetical protein CDL12_02108 [Handroanthus impetiginosus]
          Length = 611

 Score =  773 bits (1995), Expect = 0.0
 Identities = 419/591 (70%), Positives = 449/591 (75%)
 Frame = +2

Query: 2    SHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXXMLEFEELKLSPLEAIPNSVPADRXX 181
            S+  V SSK+R +INFRTQCI              +LE+E+L+LSPLEAIPNSVP  R  
Sbjct: 23   SNPSVFSSKSREAINFRTQCILSTTSPPTLTAATTVLEYEKLQLSPLEAIPNSVPPGRSW 82

Query: 182  XXXXXXXXXXMLDLEKLPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSX 361
                      +L LEKLPSLD HPI IA +KP  YVGA GPPSEVNL  N DKE+L+TS 
Sbjct: 83   TKPTSTANSSVLHLEKLPSLDTHPIPIAASKPWTYVGAVGPPSEVNLSTNLDKESLITSE 142

Query: 362  XXXXXXXXXXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAH 541
                                      MMVSHHKS KP S T  IL +VDTS+ EKSQLA 
Sbjct: 143  EAVISAAASEALALAKAAVKVAKDAAMMVSHHKSIKPGSRTRRILSDVDTSIFEKSQLAD 202

Query: 542  LAERVVVREPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTX 721
              +RVV   PK AEIGLGE  PAS PL+ESDDVEPSA+ELEFLEAQL+KSIAVRSKRQT 
Sbjct: 203  PVQRVV-GGPKAAEIGLGEKYPASYPLSESDDVEPSAKELEFLEAQLSKSIAVRSKRQTE 261

Query: 722  XXXXXXXXXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQ 901
                          N+                Q+VDY+DP                 EEQ
Sbjct: 262  RKARRTRAAEKAAANVVSVKSGSSRKKRSAV-QEVDYSDPLRYLRGTTSSSRLLTSSEEQ 320

Query: 902  VLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKS 1081
            VLSEGIQVLLKLERLQEEL +RCGG PTF+QWAAAA VD +TLRKQINYG LCKDKMIKS
Sbjct: 321  VLSEGIQVLLKLERLQEELKQRCGGQPTFAQWAAAACVDQKTLRKQINYGTLCKDKMIKS 380

Query: 1082 NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS 1261
            NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKS
Sbjct: 381  NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKS 440

Query: 1262 LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPK 1441
            LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVA+ATGLSMKRLSAVMLTPK
Sbjct: 441  LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAQATGLSMKRLSAVMLTPK 500

Query: 1442 APRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWR 1621
            APRSLDQK+GINQDLKPS+VIADP+AETSEDLLIKQFMKQDLAKVLDSL+PREKQV+KWR
Sbjct: 501  APRSLDQKVGINQDLKPSEVIADPDAETSEDLLIKQFMKQDLAKVLDSLSPREKQVIKWR 560

Query: 1622 FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMP 1774
            FGLEDGRMKTLQEIGE MGVSRERIRQIESCAFRKLKNKKRTKHL QYV P
Sbjct: 561  FGLEDGRMKTLQEIGEAMGVSRERIRQIESCAFRKLKNKKRTKHLLQYVTP 611


>ref|XP_012849681.1| PREDICTED: RNA polymerase sigma factor sigB [Erythranthe guttata]
 gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Erythranthe guttata]
          Length = 589

 Score =  695 bits (1793), Expect = 0.0
 Identities = 395/588 (67%), Positives = 429/588 (72%), Gaps = 2/588 (0%)
 Frame = +2

Query: 14   VNSSKNRVSINFRTQCIXXXXXXXXXXXXXX-MLEFEELKLSPLEAIPNSVPADRXXXXX 190
            V+SSK+R SINFRTQC+               +LEFE+L+LSPLE IPNS+PADR     
Sbjct: 27   VHSSKSRESINFRTQCVLSTTSPPPTMAATTTLLEFEKLQLSPLETIPNSLPADRSWTTP 86

Query: 191  XXXXXXXMLDLEKLPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXX 370
                   +LDL+KL SL      +A NK L YVG+ GPPSE+NLGAN DKE L+TS    
Sbjct: 87   RAKTS--LLDLDKLTSLP-----VASNKTLTYVGSVGPPSEINLGANLDKEALITSDEAV 139

Query: 371  XXXXXXXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAE 550
                                   MMVS H+STKPD+ +     EVDTS          AE
Sbjct: 140  ITAAASEALALAKAAVKVAKDAAMMVSLHRSTKPDTKS---FLEVDTS----------AE 186

Query: 551  RVVVREPKVAEIGLGEINPASDPLAESDDVE-PSAEELEFLEAQLTKSIAVRSKRQTXXX 727
            RVVVRE   AEIG GE +     L ESDD E PSAEELE L+ QL+ SIAVRSKRQ    
Sbjct: 187  RVVVRE---AEIGSGEND--DHVLGESDDSEEPSAEELELLDLQLSSSIAVRSKRQIERK 241

Query: 728  XXXXXXXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQVL 907
                        N+                Q+VDY+DP                 EEQVL
Sbjct: 242  VRRGRAAEKAAANVVSVKSGSSKKKRSPV-QEVDYSDPLRYLRATTSSTRLLTASEEQVL 300

Query: 908  SEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNI 1087
            SEGIQVLLKLERLQ EL ER GG P++SQWAAAAGVD +TLR+QINYGILCKDKMIKSNI
Sbjct: 301  SEGIQVLLKLERLQVELIERFGGEPSYSQWAAAAGVDQKTLREQINYGILCKDKMIKSNI 360

Query: 1088 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLS 1267
            RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLS
Sbjct: 361  RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLS 420

Query: 1268 DQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAP 1447
            DQSRTIRLPFHMVEATYRVKEARKQLYSENGR+P+DEEVAEATGLSMKRLSAVMLTPK P
Sbjct: 421  DQSRTIRLPFHMVEATYRVKEARKQLYSENGRVPNDEEVAEATGLSMKRLSAVMLTPKPP 480

Query: 1448 RSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFG 1627
            RSLDQKIG+NQDLKPS+VI+DPEAETSE+LLIKQFMKQDLA VLDSLNPREKQVVKWRFG
Sbjct: 481  RSLDQKIGVNQDLKPSEVISDPEAETSEELLIKQFMKQDLADVLDSLNPREKQVVKWRFG 540

Query: 1628 LEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 1771
            +EDGRMKTLQEIGELMGVSRER+RQIESCAFRKLKNKKRTK LQQYVM
Sbjct: 541  IEDGRMKTLQEIGELMGVSRERVRQIESCAFRKLKNKKRTKQLQQYVM 588


>ref|XP_022859059.1| RNA polymerase sigma factor sigB-like [Olea europaea var. sylvestris]
          Length = 598

 Score =  669 bits (1725), Expect = 0.0
 Identities = 376/591 (63%), Positives = 417/591 (70%)
 Frame = +2

Query: 2    SHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXXMLEFEELKLSPLEAIPNSVPADRXX 181
            +H   + SK+R  I F+T+CI              +LE E+L+L  LEA+ NSVPADR  
Sbjct: 23   NHTATHPSKSRDPIYFQTKCILSTATAT-------ILELEKLQLPSLEAMSNSVPADRSW 75

Query: 182  XXXXXXXXXXMLDLEKLPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSX 361
                         L KLPS D H  SIA N+P  Y+GA GPP+E N  A    ETLLTS 
Sbjct: 76   KPTGTTSVLEFEKL-KLPSFDVHSNSIAANRPWTYIGADGPPTEANFQATLATETLLTSE 134

Query: 362  XXXXXXXXXXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAH 541
                                       MV +  +T    TT     EVD S +EK+QLA+
Sbjct: 135  EAVVVVVAAEALALAKAAVKVAKDAAKMVGNRTATSDCKTT-----EVDNSFMEKNQLAY 189

Query: 542  LAERVVVREPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTX 721
             AERV  RE KV EIGLGE + AS  L ESD VEPS EELE LEAQL+KSIAVRSKRQT 
Sbjct: 190  FAERVDARESKVTEIGLGENDSASYLLKESD-VEPSHEELELLEAQLSKSIAVRSKRQTE 248

Query: 722  XXXXXXXXXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQ 901
                          NI                QD+DY+DP                 EEQ
Sbjct: 249  RKAKRARAAQKAAANIVSVKSGSTSRKKRVL-QDIDYSDPLRYLRGTTSSSRLLTAAEEQ 307

Query: 902  VLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKS 1081
              S GIQ LLKLERLQEEL ER G   TF+QWAAAAGVD +TLR+++NYGI+CKDKMIKS
Sbjct: 308  KFSSGIQDLLKLERLQEELRERYGDQLTFAQWAAAAGVDQKTLRERLNYGIICKDKMIKS 367

Query: 1082 NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS 1261
            NIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKS
Sbjct: 368  NIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKS 427

Query: 1262 LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPK 1441
            LSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR PDD+EVAEATGLSMKRLS+V+L PK
Sbjct: 428  LSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPDDDEVAEATGLSMKRLSSVLLIPK 487

Query: 1442 APRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWR 1621
            APRSLDQKIGINQDLKPS+VIADPEAETSED+L+K+FMKQDLAKVLD+LN REKQV++WR
Sbjct: 488  APRSLDQKIGINQDLKPSEVIADPEAETSEDVLMKEFMKQDLAKVLDTLNLREKQVIRWR 547

Query: 1622 FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMP 1774
            FGL DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNK+RTKHLQQYVMP
Sbjct: 548  FGLGDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYVMP 598


>ref|XP_022896521.1| RNA polymerase sigma factor sigB-like [Olea europaea var. sylvestris]
          Length = 601

 Score =  659 bits (1700), Expect = 0.0
 Identities = 369/591 (62%), Positives = 420/591 (71%)
 Frame = +2

Query: 2    SHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXXMLEFEELKLSPLEAIPNSVPADRXX 181
            +H+  + +K+R  I FRTQCI              +LE E+L+L  LE I NSVPADR  
Sbjct: 23   NHSSTHPAKSRDPIYFRTQCILSTATTT-------VLELEKLQLPSLEVISNSVPADRSS 75

Query: 182  XXXXXXXXXXMLDLEKLPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSX 361
                       LD  KLPSLD H  SIA N+   Y+ A  PP+E NL A    ETL+T  
Sbjct: 76   KPTRSAVLD--LDKLKLPSLDVHSNSIAANRTWTYIEAVCPPTEANLQATLATETLITIE 133

Query: 362  XXXXXXXXXXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAH 541
                                      MMV +  +   D  TT I+PEVD  ++E++QLA+
Sbjct: 134  EAVVAAAAAEALALAKAAVKVAKDAAMMVCNRTAMMSDCETTEIMPEVDNLLLERNQLAN 193

Query: 542  LAERVVVREPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTX 721
             +ERV  RE KV  +GLGE + AS  L ESD VEPS EELE L+AQL++SIAVRSKRQ  
Sbjct: 194  FSERVNGRESKVT-VGLGENHSASFLLTESD-VEPSHEELELLKAQLSRSIAVRSKRQIE 251

Query: 722  XXXXXXXXXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQ 901
                          N+                QD+DY+DP                 EEQ
Sbjct: 252  RKARRTRAAQKAAANVVCVKSGSTSRKKGVL-QDIDYSDPLRYLRGTTSSSKLLTAAEEQ 310

Query: 902  VLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKS 1081
             LS GIQ LLKLERLQ+ELTER G   TF+QWAAAA VD +TLR+++NYGILCKDKMIKS
Sbjct: 311  KLSVGIQDLLKLERLQKELTERYGDQFTFAQWAAAASVDQKTLRERLNYGILCKDKMIKS 370

Query: 1082 NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS 1261
            NIRLVISIAK YQG GMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKS
Sbjct: 371  NIRLVISIAKYYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKS 430

Query: 1262 LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPK 1441
            LSDQSRTIRLPFHMVEATY+VKEARKQL++ENGR PD+EEVAEATGLSMKRL+AV+ TPK
Sbjct: 431  LSDQSRTIRLPFHMVEATYKVKEARKQLFNENGRQPDNEEVAEATGLSMKRLNAVLFTPK 490

Query: 1442 APRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWR 1621
            APRSLDQKIGINQ+LKPS++IADPEAET+EDLLIK+FMKQDLAKVLD+LNPREKQV++WR
Sbjct: 491  APRSLDQKIGINQNLKPSEIIADPEAETAEDLLIKEFMKQDLAKVLDTLNPREKQVIRWR 550

Query: 1622 FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMP 1774
            FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV+P
Sbjct: 551  FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVIP 601


>ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
            sylvestris]
 ref|XP_016439073.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana tabacum]
          Length = 629

 Score =  625 bits (1613), Expect = 0.0
 Identities = 346/590 (58%), Positives = 400/590 (67%), Gaps = 5/590 (0%)
 Frame = +2

Query: 14   VNSSKNRVSINFRTQCIXXXXXXXXXXXXXXMLEFEELKLSPLEAIPNSVPADRXXXXXX 193
            +  SK R  I+ RTQCI              +L+ E+LKL  +E + +SV A+R      
Sbjct: 39   IQLSKGRDHIHLRTQCILATTSAATSTATSTVLDIEKLKLPSIEILSSSVAAERSWKPPS 98

Query: 194  XXXXXXMLDLE--KLPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXX 367
                  +LD+   KL S +A+P S+A ++P  Y GA GPP+E N  +    E L+TS   
Sbjct: 99   TATSA-VLDIPRLKLLSFEANPDSVAPDRPWTYTGAVGPPTEANTKSALATENLVTSDEA 157

Query: 368  XXXXXXXXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLA 547
                                    ++V H+     D    G L E  T+  E   LA  +
Sbjct: 158  VVAAAAAEAVALAKAALKFAKDAVLLVGHNNLKNSDDAGRGTLSEARTTPFESVPLAQPS 217

Query: 548  ERVVVR---EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQT 718
            E   VR   E K +E+   E +   D L +SDD+EPS EELE L++QL+  IAV+S RQT
Sbjct: 218  ETGRVRVGAEFKGSEMKWSESSLFEDSLTDSDDLEPSPEELEILQSQLSNVIAVKSTRQT 277

Query: 719  XXXXXXXXXXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEE 898
                           N+                Q+VDY+DP                 EE
Sbjct: 278  ERKARRGRAAERAAANVVSVKSGSTSRKKRTSVQEVDYSDPLRYLRGTTGSSRLLTASEE 337

Query: 899  QVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIK 1078
            Q LS GIQ LLKLERL++EL  RCGG PT +QWAAAAGV+ +TLRK++NYGILCKDKMIK
Sbjct: 338  QELSRGIQDLLKLERLEQELAARCGGQPTIAQWAAAAGVEQKTLRKRLNYGILCKDKMIK 397

Query: 1079 SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK 1258
            SNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDA KGFKFSTYAHWWIKQAVRK
Sbjct: 398  SNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDAAKGFKFSTYAHWWIKQAVRK 457

Query: 1259 SLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTP 1438
            SLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGRLP+DEEVAEATGLSMKRL+AVMLTP
Sbjct: 458  SLSDQSRTIRLPFHMVEATYRVKEARKQLFTENGRLPNDEEVAEATGLSMKRLTAVMLTP 517

Query: 1439 KAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKW 1618
            KAPRSLDQKIG NQ LKPS+VIADPEAETSE++L+KQFM+QDL KVLD+LNPREKQVVKW
Sbjct: 518  KAPRSLDQKIGFNQSLKPSEVIADPEAETSEEMLMKQFMRQDLEKVLDTLNPREKQVVKW 577

Query: 1619 RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 1768
            RFGL DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK LQQY+
Sbjct: 578  RFGLADGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 627


>ref|XP_019224549.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
            attenuata]
 gb|OIT33290.1| rna polymerase sigma factor sigb [Nicotiana attenuata]
          Length = 641

 Score =  620 bits (1598), Expect = 0.0
 Identities = 344/590 (58%), Positives = 400/590 (67%), Gaps = 5/590 (0%)
 Frame = +2

Query: 14   VNSSKNRVSINFRTQCIXXXXXXXXXXXXXXMLEFEELKLSPLEAIPNSVPADRXXXXXX 193
            +  SK R  I+ RTQCI              +L  E+LKL  +E + +SV  +R      
Sbjct: 51   IQLSKGRDHIHLRTQCILATTSAATSTATSTVLNIEKLKLPSIEILSSSVAVERSWKPPS 110

Query: 194  XXXXXXMLDLE--KLPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXX 367
                  +LD+   KL S +A+P S+A ++P  Y GA GPP+E N  +    E L+TS   
Sbjct: 111  TATSA-VLDIPRLKLLSFEANPDSVAPDRPWTYTGAVGPPTEANTKSALATENLVTSDEA 169

Query: 368  XXXXXXXXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLA 547
                                    ++VS +     D    G L E  T+  E   LA  +
Sbjct: 170  VVAAAAAEAVALAKAALKFAKDAVLLVSQNNLNNSDDAGRGTLSEARTTPFESVPLAQPS 229

Query: 548  E--RVVV-REPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQT 718
            E  RV V  E K +E+   + +   D L +SDD+EPS EELE L++QL+  IAV+S RQT
Sbjct: 230  ETGRVGVGAEFKGSEMKWSKSSLFEDSLTDSDDLEPSPEELEILQSQLSNVIAVKSTRQT 289

Query: 719  XXXXXXXXXXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEE 898
                           N+                Q+VDY+DP                 EE
Sbjct: 290  ERKARRGRAAERAAANVVSVKSGSTSRKKRTSVQEVDYSDPLRYLRGTTGSSRLLTASEE 349

Query: 899  QVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIK 1078
            Q LS GIQ LLKLERL++EL ERCGG PT +QWAAAAGV+ +TLRK++NYGILCKDKMIK
Sbjct: 350  QELSRGIQDLLKLERLEQELAERCGGQPTIAQWAAAAGVEQKTLRKRLNYGILCKDKMIK 409

Query: 1079 SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK 1258
            SN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDA KGFKFSTYAHWWIKQAVRK
Sbjct: 410  SNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDAAKGFKFSTYAHWWIKQAVRK 469

Query: 1259 SLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTP 1438
            SLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGRLP+DEE+AEATGLSMKRL+AVMLTP
Sbjct: 470  SLSDQSRTIRLPFHMVEATYRVKEARKQLFTENGRLPNDEELAEATGLSMKRLTAVMLTP 529

Query: 1439 KAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKW 1618
            KAPRSLDQKIG NQ LKPS+VIADPEAETSE++L+KQFM+QDL KVLD+LNPREKQVVKW
Sbjct: 530  KAPRSLDQKIGFNQSLKPSEVIADPEAETSEEMLMKQFMRQDLEKVLDTLNPREKQVVKW 589

Query: 1619 RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 1768
            RFGL DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK LQQY+
Sbjct: 590  RFGLADGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 639


>ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
            tomentosiformis]
 ref|XP_016487692.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana tabacum]
          Length = 641

 Score =  619 bits (1595), Expect = 0.0
 Identities = 342/590 (57%), Positives = 400/590 (67%), Gaps = 5/590 (0%)
 Frame = +2

Query: 14   VNSSKNRVSINFRTQCIXXXXXXXXXXXXXXMLEFEELKLSPLEAIPNSVPADRXXXXXX 193
            +  SK R  I+ RTQCI              +L+ E+LKL  +E + +SV A+R      
Sbjct: 51   IQLSKGRDHIHLRTQCILATTSAATSTATSTVLDIEKLKLPSIEILSSSVAAERSWKPPS 110

Query: 194  XXXXXXMLDLE--KLPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXX 367
                  +LD+   KL S +A+P S+A ++P  Y G  GPP+E N  +    E L+TS   
Sbjct: 111  TATSA-VLDIPRLKLLSFEANPDSVAPDRPWTYTGPVGPPTEANTKSVLATENLVTSDEA 169

Query: 368  XXXXXXXXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLA 547
                                    ++V H+     D    G L E  T+  E   LA  +
Sbjct: 170  VVAAAAAEAVALAKAALKFAKDVVLLVGHNNLKNSDDAGRGTLSEARTTPFESVHLAQPS 229

Query: 548  E--RVVV-REPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQT 718
            E  RV V  E K +E+   E +   D L +SDD++PS EELE L++QL+  IAV+S RQT
Sbjct: 230  ETGRVGVGAEFKGSEMKWSESSLLEDSLTDSDDLDPSPEELEILQSQLSNVIAVKSTRQT 289

Query: 719  XXXXXXXXXXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEE 898
                           N+                Q+VDY+DP                 EE
Sbjct: 290  ERKARRGRAAERAAANVVSVKSGSTSRKKRTSVQEVDYSDPLRYLRGTTGSSRLLTASEE 349

Query: 899  QVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIK 1078
            Q LS GIQ  LKLERL++EL +RCGG PT +QWAAAAGV+ +TLRK++NYGILCKDKMIK
Sbjct: 350  QELSRGIQDQLKLERLEQELADRCGGQPTIAQWAAAAGVEQKTLRKRLNYGILCKDKMIK 409

Query: 1079 SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK 1258
            SN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDA KGFKFSTYAHWWIKQAVRK
Sbjct: 410  SNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDAAKGFKFSTYAHWWIKQAVRK 469

Query: 1259 SLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTP 1438
            SLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGRLP+DEEVAEATGLSMKRL+AVMLTP
Sbjct: 470  SLSDQSRTIRLPFHMVEATYRVKEARKQLFTENGRLPNDEEVAEATGLSMKRLTAVMLTP 529

Query: 1439 KAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKW 1618
            KAPRSLDQKIG NQ LKPS+VIADPEAETSE++L+KQFM+QDL +VLD+LNPREKQVVKW
Sbjct: 530  KAPRSLDQKIGFNQSLKPSEVIADPEAETSEEMLMKQFMRQDLERVLDTLNPREKQVVKW 589

Query: 1619 RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 1768
            RFGL DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK LQQY+
Sbjct: 590  RFGLADGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 639


>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
            grandis]
 gb|KCW76739.1| hypothetical protein EUGRSUZ_D01094 [Eucalyptus grandis]
          Length = 588

 Score =  616 bits (1589), Expect = 0.0
 Identities = 333/522 (63%), Positives = 377/522 (72%), Gaps = 2/522 (0%)
 Frame = +2

Query: 212  MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 385
            +LD+EKL  PSL+    S   N+P  Y GA GPP+EVNLGA    ETLLTS         
Sbjct: 67   VLDMEKLRLPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIAAAA 126

Query: 386  XXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 565
                              +M+ +  S+  D+    +     TS+ + ++L  L    ++ 
Sbjct: 127  SEAVTLAKAALKSAKHAALMIRNESSSNIDNKLE-LSSRTSTSLSKHAELLELEHSNILT 185

Query: 566  EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 745
            E    E GL E N       +S+D+EP+ EEL+ L+ QL KSIAVRS+RQT         
Sbjct: 186  ELMEPEGGLREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERA 245

Query: 746  XXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQVLSEGIQV 925
                  N+                Q+VDY+DP                 EE  LSEGIQ 
Sbjct: 246  AEKAAANVVSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQD 305

Query: 926  LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 1105
            LLKLERLQ ELTERCGG P F+QWAAAAGVD +TLRK++NYG LCKDKMIKSNIRLVISI
Sbjct: 306  LLKLERLQVELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISI 365

Query: 1106 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 1285
            AKNYQGAGMNLQDLVQEGCRGLVRG EKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 366  AKNYQGAGMNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 425

Query: 1286 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 1465
            RLPFHMVEATYRVKEARKQLYSENGR PD+EEVAEATGLSMKRL+AV++TPKAPRSLDQK
Sbjct: 426  RLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQK 485

Query: 1466 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 1645
            IGINQ+LKPS+VIADP AETSED+L+KQFM+QDL KVLD+LNPREKQVV+WRFGLEDGRM
Sbjct: 486  IGINQNLKPSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRM 545

Query: 1646 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 1771
            KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV+
Sbjct: 546  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVL 587


>ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Eucalyptus
            grandis]
          Length = 601

 Score =  616 bits (1589), Expect = 0.0
 Identities = 333/522 (63%), Positives = 377/522 (72%), Gaps = 2/522 (0%)
 Frame = +2

Query: 212  MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 385
            +LD+EKL  PSL+    S   N+P  Y GA GPP+EVNLGA    ETLLTS         
Sbjct: 80   VLDMEKLRLPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIAAAA 139

Query: 386  XXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 565
                              +M+ +  S+  D+    +     TS+ + ++L  L    ++ 
Sbjct: 140  SEAVTLAKAALKSAKHAALMIRNESSSNIDNKLE-LSSRTSTSLSKHAELLELEHSNILT 198

Query: 566  EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 745
            E    E GL E N       +S+D+EP+ EEL+ L+ QL KSIAVRS+RQT         
Sbjct: 199  ELMEPEGGLREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERA 258

Query: 746  XXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQVLSEGIQV 925
                  N+                Q+VDY+DP                 EE  LSEGIQ 
Sbjct: 259  AEKAAANVVSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQD 318

Query: 926  LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 1105
            LLKLERLQ ELTERCGG P F+QWAAAAGVD +TLRK++NYG LCKDKMIKSNIRLVISI
Sbjct: 319  LLKLERLQVELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISI 378

Query: 1106 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 1285
            AKNYQGAGMNLQDLVQEGCRGLVRG EKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 379  AKNYQGAGMNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 438

Query: 1286 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 1465
            RLPFHMVEATYRVKEARKQLYSENGR PD+EEVAEATGLSMKRL+AV++TPKAPRSLDQK
Sbjct: 439  RLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQK 498

Query: 1466 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 1645
            IGINQ+LKPS+VIADP AETSED+L+KQFM+QDL KVLD+LNPREKQVV+WRFGLEDGRM
Sbjct: 499  IGINQNLKPSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRM 558

Query: 1646 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 1771
            KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV+
Sbjct: 559  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVL 600


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB [Solanum lycopersicum]
          Length = 613

 Score =  614 bits (1583), Expect = 0.0
 Identities = 343/589 (58%), Positives = 393/589 (66%), Gaps = 4/589 (0%)
 Frame = +2

Query: 14   VNSSKNRVSINFRTQCIXXXXXXXXXXXXXXMLEFEELKLSPLEAIPNSVPADRXXXXXX 193
            +  SK+R SI+ RTQCI              +L  E+L+L  +E + NSV A+R      
Sbjct: 27   IQLSKSRDSIHLRTQCILSTTSAVTSTATSTVLGIEKLQLPSIEILSNSVAAERSWKSPS 86

Query: 194  XXXXXXM-LDLEKLPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXX 370
                    +   KLPS +A+P S+A ++P  Y GA GPP+E    AN   E  L S    
Sbjct: 87   AATTTVPGIQKLKLPSFEANPDSVAPDRPWTYTGAVGPPAE----ANTKPEDSLASEEAI 142

Query: 371  XXXXXXXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAE 550
                                   M+V ++     D+   G L E  T+  E   LA   E
Sbjct: 143  VAAAAAEAVALAKAALKGAQDAVMLVGYNNLKDSDNVGRGTLSEARTAPFESVHLAQPGE 202

Query: 551  RV---VVREPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTX 721
                 V  E   +E+     +   D L +SDD+EPS EELE L++QL+  IAV+S RQT 
Sbjct: 203  TRGVGVCAELNGSEMKWTGSSLFRDTLTDSDDLEPSHEELEILQSQLSNVIAVKSNRQTE 262

Query: 722  XXXXXXXXXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQ 901
                          N+                QDVDY+DP                 EEQ
Sbjct: 263  RKARRAKAVERAAANVVSVKSGSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEEQ 322

Query: 902  VLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKS 1081
             LS GIQ LLKLERLQ ELTERCGG PTF+QWAAAAGVD  TLRK++NYGILCKDKMIKS
Sbjct: 323  ELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIKS 382

Query: 1082 NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS 1261
            N+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS
Sbjct: 383  NVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS 442

Query: 1262 LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPK 1441
            LSDQSRTIRLPFHMVEATYRVKEARKQL +ENGR P+D EVAEATGLSMKRL+AVMLTPK
Sbjct: 443  LSDQSRTIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEATGLSMKRLAAVMLTPK 502

Query: 1442 APRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWR 1621
            APRSLDQK+G N+ LKPS+V+ADP+AETSE++L KQFM+QDL KVLD+LNPREKQVV+WR
Sbjct: 503  APRSLDQKVGFNESLKPSEVLADPDAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRWR 562

Query: 1622 FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 1768
            FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK LQQY+
Sbjct: 563  FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 611


>ref|XP_015061066.1| PREDICTED: RNA polymerase sigma factor sigB [Solanum pennellii]
          Length = 613

 Score =  613 bits (1581), Expect = 0.0
 Identities = 343/590 (58%), Positives = 396/590 (67%), Gaps = 5/590 (0%)
 Frame = +2

Query: 14   VNSSKNRVSINFRTQCIXXXXXXXXXXXXXXMLEFEELKLSPLEAIPNSVPADRXXXXXX 193
            +  SK+R +I+ RTQCI              +L  E+L+L  +E + NSV A+R      
Sbjct: 27   IQLSKSRDNIHLRTQCILSTTSAVTSTATSTVLGIEKLQLPSIEILSNSVAAERSWKSTS 86

Query: 194  XXXXXXMLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXX 367
                  + D++KL  PS +A+P S+A ++P  Y GA GPP+E    AN   E  L S   
Sbjct: 87   AATTT-VPDIQKLKLPSFEANPDSVAPDRPWTYTGAVGPPAE----ANTKPEDSLASEEA 141

Query: 368  XXXXXXXXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLA 547
                                    M+V ++     D+   G L E  T+  E   LA   
Sbjct: 142  IVAAAAAEAVALAKAALKGAQDAVMLVGYNNLKDSDNVGRGTLSEARTAPFESVHLAQPG 201

Query: 548  ERV---VVREPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQT 718
            E     V  E   +E+     +   D L +SDD+EPS EELE L++QL+  IAV+S RQT
Sbjct: 202  ETRGVGVCAELNGSEMKWTGSSLFRDTLTDSDDLEPSHEELEILQSQLSNVIAVKSNRQT 261

Query: 719  XXXXXXXXXXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEE 898
                           N+                QDVDY+DP                 EE
Sbjct: 262  ERKARRAKAVERAAANVVSVKSGSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEE 321

Query: 899  QVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIK 1078
            Q LS GIQ LLKLERLQ ELTERCGG PTF+QWAAAAGVD  TLRK++NYGILCKDKMIK
Sbjct: 322  QELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIK 381

Query: 1079 SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK 1258
            SN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK
Sbjct: 382  SNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK 441

Query: 1259 SLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTP 1438
            SLSDQSRTIRLPFHMVEATYRVKEARKQL +ENGR P+D EVAEATGLSMKRL+AVMLTP
Sbjct: 442  SLSDQSRTIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEATGLSMKRLAAVMLTP 501

Query: 1439 KAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKW 1618
            KAPRSLDQK+G N+ LKPS+V+ADP+AETSE++L KQFM+QDL KVLD+LNPREKQVV+W
Sbjct: 502  KAPRSLDQKVGFNESLKPSEVLADPDAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRW 561

Query: 1619 RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 1768
            RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK LQQY+
Sbjct: 562  RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 611


>ref|XP_017977747.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Theobroma
            cacao]
          Length = 579

 Score =  611 bits (1575), Expect = 0.0
 Identities = 330/523 (63%), Positives = 381/523 (72%), Gaps = 3/523 (0%)
 Frame = +2

Query: 212  MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 385
            +LD+EKL  PS +AHP S+A ++P  Y+GA GPPSE +LGA    + LLTS         
Sbjct: 55   VLDVEKLRLPSFEAHPNSVAVDRPWTYIGATGPPSEASLGATLATDNLLTSDEAIIAAAA 114

Query: 386  XXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERV-VV 562
                              +M  ++   K +  + G+    D S   K  L   AER  ++
Sbjct: 115  AEAVALARAAVKVAKDAALMAENYNYAKTEMKS-GVSFATD-SFTSKWALFTEAERAGII 172

Query: 563  REPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXX 742
             +    E  + E +   +   ESD++EP+ EELE LE QL++SIAVRS+RQT        
Sbjct: 173  GDSPTDESEMEEDDSEQNSTTESDELEPTNEELERLEEQLSRSIAVRSRRQTERKAKRTR 232

Query: 743  XXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQVLSEGIQ 922
                   N+                QDVDY+DP                 EE  LSEGIQ
Sbjct: 233  AAEKAAANVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQ 292

Query: 923  VLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVIS 1102
             LLKLERLQEEL ERCGG PTF+QWAAAAGVD +TLR ++NYG+ CKDKMIKSNIRLVIS
Sbjct: 293  DLLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVIS 352

Query: 1103 IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRT 1282
            IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 353  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 412

Query: 1283 IRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQ 1462
            IRLPFHMVEATYRVKEARKQLYSENGR PD+EEVAEATGLSMKRL+AV+LTPKAPRSLDQ
Sbjct: 413  IRLPFHMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQ 472

Query: 1463 KIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGR 1642
            KIGINQ+LKPS+VIADPEAET+ED+LIKQFM++DL KVLDSL+ RE+QV++WRFG+EDGR
Sbjct: 473  KIGINQNLKPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGR 532

Query: 1643 MKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 1771
            MKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY++
Sbjct: 533  MKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLL 575


>ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB [Ziziphus jujuba]
          Length = 573

 Score =  609 bits (1571), Expect = 0.0
 Identities = 329/525 (62%), Positives = 386/525 (73%), Gaps = 5/525 (0%)
 Frame = +2

Query: 212  MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 385
            +L+LEKL  PSLDA+  S+  N+P  Y GA GPP++ NL A    ETLLTS         
Sbjct: 52   VLNLEKLRLPSLDANSDSVTANRPWTYTGAIGPPAKANLEATLATETLLTSEEAVIAAAA 111

Query: 386  XXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 565
                              ++++++  T+ +ST+    PE D   ++  Q     + V + 
Sbjct: 112  AEAVTLAKAAVKVAKDATLLINNNPCTRAESTSL-FSPEDDALHLKWPQHMKTGQPVRLG 170

Query: 566  E---PKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXX 736
            +   PK A++    +  A   + E+DD+EP+ EELE L++QL+  IAVRS+RQT      
Sbjct: 171  DSMGPKTAQLDDYSMQCA---IKEADDLEPTHEELELLQSQLSNGIAVRSRRQTERKARR 227

Query: 737  XXXXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQVLSEG 916
                      +                QD+D++DP                 EE  LSEG
Sbjct: 228  TRAAEKAAATVVSVKSGSTVRKKRASLQDIDHSDPLRYLRATTSTSRLLTATEEIELSEG 287

Query: 917  IQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLV 1096
            IQ LLKLE+LQEELTERCG  PTF+QWAAAAGVD +TLR++INYGILCKDKMIKSNIRLV
Sbjct: 288  IQDLLKLEKLQEELTERCGSQPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNIRLV 347

Query: 1097 ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQS 1276
            ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 348  ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 407

Query: 1277 RTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSL 1456
            RTIRLPFHMVEATYRVKEARKQLYS+NGR PDDEEVAEATGLSMKRL+AV+LTPKAPRSL
Sbjct: 408  RTIRLPFHMVEATYRVKEARKQLYSKNGRHPDDEEVAEATGLSMKRLAAVLLTPKAPRSL 467

Query: 1457 DQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLED 1636
            +QKIGINQ+LKPS+VIADP+AETSED+LI++FMKQDL KVLDSLNPREKQV++WRFG+ED
Sbjct: 468  EQKIGINQNLKPSEVIADPDAETSEDVLIRKFMKQDLDKVLDSLNPREKQVIRWRFGMED 527

Query: 1637 GRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 1771
            GRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY++
Sbjct: 528  GRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLV 572


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB [Solanum tuberosum]
          Length = 613

 Score =  610 bits (1573), Expect = 0.0
 Identities = 344/590 (58%), Positives = 395/590 (66%), Gaps = 5/590 (0%)
 Frame = +2

Query: 14   VNSSKNRVSINFRTQCIXXXXXXXXXXXXXXMLEFEELKLSPLEAIPNSVPADRXXXXXX 193
            +  SK+R  I+ RTQCI              +L  E+L+L  +E + NSV A+R      
Sbjct: 27   IQLSKSRDHIHLRTQCILSTTSAVTSTATSTVLGIEKLQLPSIEILSNSVAAERSWKSPS 86

Query: 194  XXXXXXMLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXX 367
                  + D++KL  PS +A+P S+A ++P  Y GA GPP+E    AN   E  L S   
Sbjct: 87   AATTT-VPDIQKLKLPSFEANPDSVAPDRPWTYTGAVGPPAE----ANTKPENSLASEEA 141

Query: 368  XXXXXXXXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLA 547
                                    M+V ++     D+   G L E  T+  E   LA   
Sbjct: 142  IVAAAAAEAVALAKAALKGAQDAVMLVGYNNLNDSDNVGRGTLSEARTAPFESVHLAQPG 201

Query: 548  E--RV-VVREPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQT 718
            E  RV V  E   +E+     +   + L +SDD+EPS EELE L++QL+  IAV+S RQT
Sbjct: 202  ETRRVGVCAELNGSEMKWTGSSLFRETLTDSDDLEPSPEELEILQSQLSNVIAVKSNRQT 261

Query: 719  XXXXXXXXXXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEE 898
                           N+                QDVDY+DP                 EE
Sbjct: 262  ERKAKRAKSVEKAAANVVTVKSGSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEE 321

Query: 899  QVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIK 1078
            Q LS GIQ LLKLERLQ ELTERCGG PTF+QWAAAAGVD  TLRK++NYGILCKDKMIK
Sbjct: 322  QELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIK 381

Query: 1079 SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK 1258
            SN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK
Sbjct: 382  SNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK 441

Query: 1259 SLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTP 1438
            SLSDQSR IRLPFHMVEATYRVKEARKQL +ENGR P+D EVAEA GLSMKRL+AVMLTP
Sbjct: 442  SLSDQSRMIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEAAGLSMKRLAAVMLTP 501

Query: 1439 KAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKW 1618
            KAPRSLDQKIG N+ LKPS+V+ADPEAETSE++L KQFM+QDL KVLD+LNPREKQVV+W
Sbjct: 502  KAPRSLDQKIGFNESLKPSEVLADPEAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRW 561

Query: 1619 RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 1768
            RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK LQQY+
Sbjct: 562  RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 611


>ref|XP_021283422.1| RNA polymerase sigma factor sigB [Herrania umbratica]
          Length = 579

 Score =  608 bits (1569), Expect = 0.0
 Identities = 326/523 (62%), Positives = 379/523 (72%), Gaps = 3/523 (0%)
 Frame = +2

Query: 212  MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 385
            +LD+EKL  PS +AHP S+A ++P  Y+GA GPPSE +L A    E LLTS         
Sbjct: 55   VLDVEKLRLPSFEAHPNSVAADRPWTYIGATGPPSEASLAATLATENLLTSDEAVIAAAA 114

Query: 386  XXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERV-VV 562
                              +M  ++   K +  + G+    DT    K  L   AER  ++
Sbjct: 115  AESVALARAAVKVAKDAALMAKNYNYAKTEMKS-GVSSATDT-FTSKWALFTEAERAGII 172

Query: 563  REPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXX 742
             +    E  + E +   +   ESD++EP+ EELE LE QL++SI VRS+RQT        
Sbjct: 173  GDSPTDESEMEEDDSEQNATTESDELEPTNEELELLEEQLSRSIIVRSRRQTERKAKRTR 232

Query: 743  XXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQVLSEGIQ 922
                   N+                QDVDY+DP                 EE  LSEGIQ
Sbjct: 233  AAEKAAVNVVSVKSGSTNRKKRGALQDVDYSDPLHYLRVTTSTSRLLTANEELELSEGIQ 292

Query: 923  VLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVIS 1102
             LLKLERLQEEL ERCGG PTF+QWAAAAGVD +TLR ++NYG+LCKDKMIKSNIRLVIS
Sbjct: 293  DLLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVLCKDKMIKSNIRLVIS 352

Query: 1103 IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRT 1282
            IAKNYQGAGMNLQDLVQEGCRGL+RGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 353  IAKNYQGAGMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 412

Query: 1283 IRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQ 1462
            IRLPFHMVEATYRV+EARK LYSENGR PD+EEVA+ATGLSMKRL+AV+LTPKAPRSLDQ
Sbjct: 413  IRLPFHMVEATYRVREARKHLYSENGRHPDNEEVAKATGLSMKRLTAVLLTPKAPRSLDQ 472

Query: 1463 KIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGR 1642
            KIGINQ+LKPS+VIADPEAET+ED+LIKQFM++DL KVLDSL+ RE+QV++WRFG+EDGR
Sbjct: 473  KIGINQNLKPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGR 532

Query: 1643 MKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 1771
            MKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY++
Sbjct: 533  MKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLL 575


>ref|XP_010097670.1| RNA polymerase sigma factor sigB [Morus notabilis]
 gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score =  606 bits (1562), Expect = 0.0
 Identities = 329/522 (63%), Positives = 379/522 (72%), Gaps = 2/522 (0%)
 Frame = +2

Query: 212  MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 385
            +L +EKL  PSLDA+  S+  N+P  Y GA GPP E N  A    ETLLTS         
Sbjct: 61   VLSVEKLRFPSLDANSESVTSNRPWTYTGATGPPVEANFEATLATETLLTSEEAVIAAAA 120

Query: 386  XXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 565
                              ++V    ST+ +S +      + +S     + A  A RV  R
Sbjct: 121  AEAVTLAKAAVKVAKDAALLV--RPSTRAESIS------LVSSEARNIKTAQAASRV--R 170

Query: 566  EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 745
            +   AE+ L E +P  D   ES+D++P+ EEL  L+ QL+KSIAVRS+RQ+         
Sbjct: 171  DSLRAEMALIEDHPPKDAAKESNDLQPTNEELRILQEQLSKSIAVRSRRQSERKAKRDRA 230

Query: 746  XXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQVLSEGIQV 925
                  N+                QDVD++DP                 EE  LSEGIQ 
Sbjct: 231  AEKAAANVVAVKSGSNSRKKRASVQDVDHSDPLRYLRSTTSTSRLLTATEEIELSEGIQD 290

Query: 926  LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 1105
            LLKLE+LQEEL ERCGGPPTF+QWAAAAGVD +TLR++INYGILCKDKMIKSN+RLVISI
Sbjct: 291  LLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNVRLVISI 350

Query: 1106 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 1285
            AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 351  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 410

Query: 1286 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 1465
            RLPFHMVEATYRVKEARKQLYSENGR P+DEEVAEATGLSMKRL+AV+LTPKAPRSL+QK
Sbjct: 411  RLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQK 470

Query: 1466 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 1645
            IGINQ+LKPS++IADP+AET ED+L +QFMKQDL KVLDSLN REKQV++WRFG++DGRM
Sbjct: 471  IGINQNLKPSEIIADPDAETLEDVLTRQFMKQDLDKVLDSLNQREKQVIRWRFGMDDGRM 530

Query: 1646 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 1771
            KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY++
Sbjct: 531  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLI 572


>ref|XP_017977746.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Theobroma
            cacao]
          Length = 586

 Score =  605 bits (1561), Expect = 0.0
 Identities = 331/530 (62%), Positives = 382/530 (72%), Gaps = 10/530 (1%)
 Frame = +2

Query: 212  MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNL-------GANFDKETLLTSXX 364
            +LD+EKL  PS +AHP S+A ++P  Y+GA GPPSEV+L       GA    + LLTS  
Sbjct: 55   VLDVEKLRLPSFEAHPNSVAVDRPWTYIGATGPPSEVSLLRLRASLGATLATDNLLTSDE 114

Query: 365  XXXXXXXXXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHL 544
                                     +M  ++   K +  + G+    D S   K  L   
Sbjct: 115  AIIAAAAAEAVALARAAVKVAKDAALMAENYNYAKTEMKS-GVSFATD-SFTSKWALFTE 172

Query: 545  AERV-VVREPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTX 721
            AER  ++ +    E  + E +   +   ESD++EP+ EELE LE QL++SIAVRS+RQT 
Sbjct: 173  AERAGIIGDSPTDESEMEEDDSEQNSTTESDELEPTNEELERLEEQLSRSIAVRSRRQTE 232

Query: 722  XXXXXXXXXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQ 901
                          N+                QDVDY+DP                 EE 
Sbjct: 233  RKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEEL 292

Query: 902  VLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKS 1081
             LSEGIQ LLKLERLQEEL ERCGG PTF+QWAAAAGVD +TLR ++NYG+ CKDKMIKS
Sbjct: 293  ELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKS 352

Query: 1082 NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS 1261
            NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKS
Sbjct: 353  NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKS 412

Query: 1262 LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPK 1441
            LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR PD+EEVAEATGLSMKRL+AV+LTPK
Sbjct: 413  LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPK 472

Query: 1442 APRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWR 1621
            APRSLDQKIGINQ+LKPS+VIADPEAET+ED+LIKQFM++DL KVLDSL+ RE+QV++WR
Sbjct: 473  APRSLDQKIGINQNLKPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWR 532

Query: 1622 FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 1771
            FG+EDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY++
Sbjct: 533  FGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLL 582


>ref|XP_023885428.1| RNA polymerase sigma factor sigB [Quercus suber]
          Length = 585

 Score =  604 bits (1558), Expect = 0.0
 Identities = 327/523 (62%), Positives = 378/523 (72%), Gaps = 2/523 (0%)
 Frame = +2

Query: 212  MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 385
            +L++EKL  PSL+ +  S+ EN+P  Y GA  PP+EV   A    ETLLTS         
Sbjct: 65   LLNMEKLRLPSLETNSDSVTENRPWTYTGATRPPAEVKFEATLATETLLTSEEAVIAAAA 124

Query: 386  XXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 565
                              +MV +  S K DS +  I PE D    +  QL    +R    
Sbjct: 125  AEAVTLAKAALKVAKDAALMVKNSDSAKADSVSL-ISPEADALHFKWVQLMK-TDRAGTV 182

Query: 566  EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 745
            +   AE G+ E +       ESDDVEP+ EELE L+ QL+KS AVRS+RQT         
Sbjct: 183  DLVEAEAGVLEDHSEQYVAEESDDVEPTREELEALQEQLSKSKAVRSRRQTERKARRARA 242

Query: 746  XXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQVLSEGIQV 925
                  N+                QDVDY DP                 EE  LSEGIQ 
Sbjct: 243  ADKAAANVVSVKPGSTSRKKRASLQDVDYYDPLRYLRATTSSSKLLTATEELELSEGIQD 302

Query: 926  LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 1105
            +LKLE+LQEELTERCGG PTF+QWAAAAGVD +TLR+++NYGI CKD+MIKSNIRLVISI
Sbjct: 303  MLKLEKLQEELTERCGGQPTFAQWAAAAGVDSKTLRQRLNYGIQCKDRMIKSNIRLVISI 362

Query: 1106 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 1285
            AKNYQG GMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQ+VRKSLSDQSRTI
Sbjct: 363  AKNYQGVGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQSVRKSLSDQSRTI 422

Query: 1286 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 1465
            RLPFHMVEATYRVKEARKQLYSENGR PDD+EVAEATGL+MKRL++V+LTPKAPRSLDQK
Sbjct: 423  RLPFHMVEATYRVKEARKQLYSENGRHPDDKEVAEATGLTMKRLTSVLLTPKAPRSLDQK 482

Query: 1466 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 1645
            IGINQ+LKPS++I+DPEAET+E+LL+KQFMKQDL KVLDSLNPREKQV++WRFG++DGRM
Sbjct: 483  IGINQNLKPSEIISDPEAETAEELLLKQFMKQDLEKVLDSLNPREKQVIRWRFGMDDGRM 542

Query: 1646 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMP 1774
            KTLQEIGE MGVSRERIRQIESCAFRKLKNKKRTK+L+QY++P
Sbjct: 543  KTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTKNLRQYLLP 585


>gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
          Length = 623

 Score =  604 bits (1558), Expect = 0.0
 Identities = 330/531 (62%), Positives = 381/531 (71%), Gaps = 11/531 (2%)
 Frame = +2

Query: 212  MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 385
            +LD+EKL  PS +AHP S+A ++P  Y+GA GPPSE +LGA    + LLTS         
Sbjct: 91   VLDVEKLRLPSFEAHPNSVAVDRPWTYIGATGPPSEASLGATLATDNLLTSDEAVIAAAA 150

Query: 386  XXXXXXXXXXXXXXXXXXMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERV-VV 562
                              +M  ++   K +  + G+    D S   K  L   AER  ++
Sbjct: 151  AEAVALARAAVKVAKDAALMAENYNYAKTEMKS-GVSFATD-SFTSKWALFTEAERAGII 208

Query: 563  REPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXX 742
             +    E  + E +   +   ESD++EP+ EELE LE QL++SIAVRS+RQT        
Sbjct: 209  GDSPTDESEMEEDDSEQNSTTESDELEPTNEELEHLEEQLSRSIAVRSRRQTERKAKRTR 268

Query: 743  XXXXXXXNIXXXXXXXXXXXXXXXXQDVDYNDPXXXXXXXXXXXXXXXXXEEQVLSEGIQ 922
                   N+                QDVDY+DP                 EE  LSEGIQ
Sbjct: 269  AAEKAAANVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQ 328

Query: 923  VLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVIS 1102
             LLKLERLQEEL ERCGG PTF+QWAAAAGVD +TLR ++NYG+ CKDKMIKSNIRLVIS
Sbjct: 329  DLLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVIS 388

Query: 1103 IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRT 1282
            IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 389  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 448

Query: 1283 IRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQ 1462
            IRLPFHMVEATYRVKEARKQLYSENGR PD+EEVAEATGLSMKRL+AV+LTPKAPRSLDQ
Sbjct: 449  IRLPFHMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQ 508

Query: 1463 KIGINQDLKPS--------DVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKW 1618
            KIGINQ+LKPS        +VIADPEAET+ED+LIKQFM++DL KVLDSL+ RE+QV++W
Sbjct: 509  KIGINQNLKPSVCPVSSLAEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRW 568

Query: 1619 RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 1771
            RFG+EDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY++
Sbjct: 569  RFGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLL 619