BLASTX nr result
ID: Rehmannia29_contig00005321
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00005321
(569 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011094632.1| RNA polymerase sigma factor sigF, chloroplas... 241 2e-74
ref|XP_011094631.1| RNA polymerase sigma factor sigF, chloroplas... 241 8e-74
gb|PIN23381.1| hypothetical protein CDL12_03889 [Handroanthus im... 234 3e-71
gb|ONI03025.1| hypothetical protein PRUPE_6G234100 [Prunus persica] 230 4e-71
ref|XP_020422239.1| RNA polymerase sigma factor sigF, chloroplas... 230 1e-69
ref|XP_020422238.1| RNA polymerase sigma factor sigF, chloroplas... 230 1e-69
ref|XP_008243975.1| PREDICTED: RNA polymerase sigma factor sigF,... 230 1e-69
ref|XP_021827463.1| RNA polymerase sigma factor sigF, chloroplas... 229 2e-69
ref|XP_021827462.1| RNA polymerase sigma factor sigF, chloroplas... 229 4e-69
ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF,... 228 5e-69
ref|XP_012840944.1| PREDICTED: RNA polymerase sigma factor sigF,... 228 1e-68
ref|XP_012840943.1| PREDICTED: RNA polymerase sigma factor sigF,... 228 1e-68
ref|XP_009376812.1| PREDICTED: RNA polymerase sigma factor sigF,... 227 3e-68
gb|KZV34129.1| RNA polymerase sigma factor sigF, chloroplastic [... 224 4e-68
ref|XP_017184461.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 228 5e-68
ref|XP_009376811.1| PREDICTED: RNA polymerase sigma factor sigF,... 227 7e-68
emb|CDP06761.1| unnamed protein product [Coffea canephora] 224 2e-67
ref|XP_024189014.1| RNA polymerase sigma factor sigF, chloroplas... 223 3e-67
ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF,... 223 3e-67
ref|XP_024189013.1| RNA polymerase sigma factor sigF, chloroplas... 223 5e-67
>ref|XP_011094632.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Sesamum
indicum]
ref|XP_011094633.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Sesamum
indicum]
Length = 496
Score = 241 bits (615), Expect = 2e-74
Identities = 117/131 (89%), Positives = 124/131 (94%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
ELM+LQE++SRL+ QFSREPTLVEWA AAG SC LQSQ+HCG+SSR KLI ANFRMVVH
Sbjct: 211 ELMRLQEMKSRLKVQFSREPTLVEWAAAAGISCQALQSQIHCGDSSRQKLICANFRMVVH 270
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGLSLQDLLQEGSMGLM+SVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT
Sbjct: 271 IAKQYQGRGLSLQDLLQEGSMGLMRSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 330
Query: 535 IRLPENVYSLL 567
IRLPENVYSLL
Sbjct: 331 IRLPENVYSLL 341
>ref|XP_011094631.1| RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Sesamum
indicum]
Length = 561
Score = 241 bits (615), Expect = 8e-74
Identities = 117/131 (89%), Positives = 124/131 (94%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
ELM+LQE++SRL+ QFSREPTLVEWA AAG SC LQSQ+HCG+SSR KLI ANFRMVVH
Sbjct: 276 ELMRLQEMKSRLKVQFSREPTLVEWAAAAGISCQALQSQIHCGDSSRQKLICANFRMVVH 335
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGLSLQDLLQEGSMGLM+SVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT
Sbjct: 336 IAKQYQGRGLSLQDLLQEGSMGLMRSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 395
Query: 535 IRLPENVYSLL 567
IRLPENVYSLL
Sbjct: 396 IRLPENVYSLL 406
>gb|PIN23381.1| hypothetical protein CDL12_03889 [Handroanthus impetiginosus]
Length = 547
Score = 234 bits (597), Expect = 3e-71
Identities = 113/131 (86%), Positives = 122/131 (93%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
ELMKLQEVRS L+TQF REPTLVEWA A G SC L+SQ+HCGNSSR+KLIYANFRMVVH
Sbjct: 262 ELMKLQEVRSCLQTQFCREPTLVEWAAAIGISCQALRSQIHCGNSSREKLIYANFRMVVH 321
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRG+SLQDLLQEGSMGLM+SVEKFKPQAGCRFATYAYWWIRQSIRKALF++SRT
Sbjct: 322 IAKQYQGRGVSLQDLLQEGSMGLMRSVEKFKPQAGCRFATYAYWWIRQSIRKALFRYSRT 381
Query: 535 IRLPENVYSLL 567
IRLPEN+Y L
Sbjct: 382 IRLPENMYGHL 392
>gb|ONI03025.1| hypothetical protein PRUPE_6G234100 [Prunus persica]
Length = 422
Score = 230 bits (587), Expect = 4e-71
Identities = 108/131 (82%), Positives = 121/131 (92%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
+L KL+EV+SRL+TQF REPTL+EWAEA G SC +L+SQ+ G SSR+KLIYAN RMVVH
Sbjct: 137 DLFKLEEVKSRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVH 196
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGL LQDL+QEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ++RKA+FQHSRT
Sbjct: 197 IAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRT 256
Query: 535 IRLPENVYSLL 567
IRLPENVYSLL
Sbjct: 257 IRLPENVYSLL 267
>ref|XP_020422239.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Prunus
persica]
gb|ONI03022.1| hypothetical protein PRUPE_6G234100 [Prunus persica]
Length = 568
Score = 230 bits (587), Expect = 1e-69
Identities = 108/131 (82%), Positives = 121/131 (92%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
+L KL+EV+SRL+TQF REPTL+EWAEA G SC +L+SQ+ G SSR+KLIYAN RMVVH
Sbjct: 283 DLFKLEEVKSRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVH 342
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGL LQDL+QEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ++RKA+FQHSRT
Sbjct: 343 IAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRT 402
Query: 535 IRLPENVYSLL 567
IRLPENVYSLL
Sbjct: 403 IRLPENVYSLL 413
>ref|XP_020422238.1| RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Prunus
persica]
gb|ONI03024.1| hypothetical protein PRUPE_6G234100 [Prunus persica]
Length = 573
Score = 230 bits (587), Expect = 1e-69
Identities = 108/131 (82%), Positives = 121/131 (92%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
+L KL+EV+SRL+TQF REPTL+EWAEA G SC +L+SQ+ G SSR+KLIYAN RMVVH
Sbjct: 288 DLFKLEEVKSRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVH 347
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGL LQDL+QEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ++RKA+FQHSRT
Sbjct: 348 IAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRT 407
Query: 535 IRLPENVYSLL 567
IRLPENVYSLL
Sbjct: 408 IRLPENVYSLL 418
>ref|XP_008243975.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Prunus
mume]
Length = 573
Score = 230 bits (587), Expect = 1e-69
Identities = 108/131 (82%), Positives = 121/131 (92%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
+L KL+EV+SRL+TQF REPTL+EWAEA G SC +L+SQ+ G SSR+KLIYAN RMVVH
Sbjct: 288 DLFKLEEVKSRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVH 347
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGL LQDL+QEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ++RKA+FQHSRT
Sbjct: 348 IAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRT 407
Query: 535 IRLPENVYSLL 567
IRLPENVYSLL
Sbjct: 408 IRLPENVYSLL 418
>ref|XP_021827463.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Prunus
avium]
Length = 539
Score = 229 bits (584), Expect = 2e-69
Identities = 107/131 (81%), Positives = 121/131 (92%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
+L KL+EV++RL+TQF REPTL+EWAEA G SC +L+SQ+ G SSR+KLIYAN RMVVH
Sbjct: 254 DLFKLEEVKTRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVH 313
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGL LQDL+QEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ++RKA+FQHSRT
Sbjct: 314 IAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRT 373
Query: 535 IRLPENVYSLL 567
IRLPENVYSLL
Sbjct: 374 IRLPENVYSLL 384
>ref|XP_021827462.1| RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Prunus
avium]
Length = 573
Score = 229 bits (584), Expect = 4e-69
Identities = 107/131 (81%), Positives = 121/131 (92%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
+L KL+EV++RL+TQF REPTL+EWAEA G SC +L+SQ+ G SSR+KLIYAN RMVVH
Sbjct: 288 DLFKLEEVKTRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVH 347
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGL LQDL+QEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ++RKA+FQHSRT
Sbjct: 348 IAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRT 407
Query: 535 IRLPENVYSLL 567
IRLPENVYSLL
Sbjct: 408 IRLPENVYSLL 418
>ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic
[Fragaria vesca subsp. vesca]
Length = 554
Score = 228 bits (582), Expect = 5e-69
Identities = 106/131 (80%), Positives = 121/131 (92%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
++ KL+ V+SRL++QF REPTL+EWAEA G SC +LQSQ+ CG SSR+KLIY+N RMVVH
Sbjct: 269 DVFKLEAVKSRLQSQFGREPTLIEWAEAVGISCQMLQSQLRCGTSSREKLIYSNLRMVVH 328
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGL LQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWW+RQ+IRKA+FQHSRT
Sbjct: 329 IAKQYQGRGLGLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWVRQTIRKAIFQHSRT 388
Query: 535 IRLPENVYSLL 567
IRLPENVY+LL
Sbjct: 389 IRLPENVYTLL 399
>ref|XP_012840944.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Erythranthe guttata]
Length = 558
Score = 228 bits (580), Expect = 1e-68
Identities = 112/131 (85%), Positives = 120/131 (91%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
ELMKLQEVRSRL+TQFSREPTLVEWA A G S LQ QV+CGN SR+KLIYANFR+VV+
Sbjct: 273 ELMKLQEVRSRLQTQFSREPTLVEWAAAVGISTQALQFQVNCGNFSREKLIYANFRLVVY 332
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGL+LQDLLQ GSMGLMKSVEKFKP GCRFATYAYWWIRQSIRK+LFQHSRT
Sbjct: 333 IAKQYQGRGLNLQDLLQLGSMGLMKSVEKFKPLVGCRFATYAYWWIRQSIRKSLFQHSRT 392
Query: 535 IRLPENVYSLL 567
IRLPENVY+LL
Sbjct: 393 IRLPENVYTLL 403
>ref|XP_012840943.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Erythranthe guttata]
gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Erythranthe guttata]
Length = 559
Score = 228 bits (580), Expect = 1e-68
Identities = 112/131 (85%), Positives = 120/131 (91%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
ELMKLQEVRSRL+TQFSREPTLVEWA A G S LQ QV+CGN SR+KLIYANFR+VV+
Sbjct: 274 ELMKLQEVRSRLQTQFSREPTLVEWAAAVGISTQALQFQVNCGNFSREKLIYANFRLVVY 333
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGL+LQDLLQ GSMGLMKSVEKFKP GCRFATYAYWWIRQSIRK+LFQHSRT
Sbjct: 334 IAKQYQGRGLNLQDLLQLGSMGLMKSVEKFKPLVGCRFATYAYWWIRQSIRKSLFQHSRT 393
Query: 535 IRLPENVYSLL 567
IRLPENVY+LL
Sbjct: 394 IRLPENVYTLL 404
>ref|XP_009376812.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Pyrus x bretschneideri]
Length = 573
Score = 227 bits (578), Expect = 3e-68
Identities = 106/131 (80%), Positives = 121/131 (92%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
+L KL+EV++RL++QF REPTLVEWAEA G SC +L+SQ+ G SSR+KLIYAN RMVVH
Sbjct: 288 DLFKLEEVKNRLQSQFGREPTLVEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVH 347
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGL LQDL+QEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ++RKA+FQHSRT
Sbjct: 348 IAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRT 407
Query: 535 IRLPENVYSLL 567
IRLPENVY+LL
Sbjct: 408 IRLPENVYTLL 418
>gb|KZV34129.1| RNA polymerase sigma factor sigF, chloroplastic [Dorcoceras
hygrometricum]
Length = 492
Score = 224 bits (572), Expect = 4e-68
Identities = 105/131 (80%), Positives = 119/131 (90%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
ELMKLQEVR+ L TQFSREPT+VEWA A G S L+S++HCGNSSR++LIYANFR+VVH
Sbjct: 207 ELMKLQEVRNMLRTQFSREPTVVEWAAAIGISSQALRSELHCGNSSRERLIYANFRLVVH 266
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
+AKQYQGRGL+ DLLQEGS+GLM+SVEKFKPQ GCRFATYAYWW+RQ+IRKALFQHSRT
Sbjct: 267 VAKQYQGRGLNFPDLLQEGSIGLMRSVEKFKPQVGCRFATYAYWWVRQAIRKALFQHSRT 326
Query: 535 IRLPENVYSLL 567
IRLPENVY LL
Sbjct: 327 IRLPENVYGLL 337
>ref|XP_017184461.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase sigma factor sigF,
chloroplastic-like [Malus domestica]
Length = 645
Score = 228 bits (581), Expect = 5e-68
Identities = 107/131 (81%), Positives = 121/131 (92%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
+L KL+EV+SRL++QF REPTLVEWAEA G SC +L+SQ+ G SSR+KLIYAN RMVVH
Sbjct: 360 DLFKLEEVKSRLQSQFGREPTLVEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVH 419
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGL LQDL+QEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ++RKA+FQHSRT
Sbjct: 420 IAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRT 479
Query: 535 IRLPENVYSLL 567
IRLPENVY+LL
Sbjct: 480 IRLPENVYTLL 490
>ref|XP_009376811.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Pyrus x bretschneideri]
Length = 610
Score = 227 bits (578), Expect = 7e-68
Identities = 106/131 (80%), Positives = 121/131 (92%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
+L KL+EV++RL++QF REPTLVEWAEA G SC +L+SQ+ G SSR+KLIYAN RMVVH
Sbjct: 325 DLFKLEEVKNRLQSQFGREPTLVEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVH 384
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGL LQDL+QEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ++RKA+FQHSRT
Sbjct: 385 IAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRT 444
Query: 535 IRLPENVYSLL 567
IRLPENVY+LL
Sbjct: 445 IRLPENVYTLL 455
>emb|CDP06761.1| unnamed protein product [Coffea canephora]
Length = 556
Score = 224 bits (572), Expect = 2e-67
Identities = 105/129 (81%), Positives = 119/129 (92%)
Frame = +1
Query: 181 MKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIA 360
MK +EV+SRL++QF+REPTLVEWAEAAG SC LQ+Q+H GN SR+KLIYAN RMVVHIA
Sbjct: 273 MKQEEVKSRLQSQFNREPTLVEWAEAAGLSCRALQTQLHSGNRSREKLIYANHRMVVHIA 332
Query: 361 KQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIR 540
+QY GRGLSLQDLLQEGSMGLM+S+EKFKPQ GCRFATYAYWWIRQ+IRKA+FQHSRTIR
Sbjct: 333 RQYMGRGLSLQDLLQEGSMGLMRSIEKFKPQVGCRFATYAYWWIRQAIRKAIFQHSRTIR 392
Query: 541 LPENVYSLL 567
LP+NVY LL
Sbjct: 393 LPDNVYGLL 401
>ref|XP_024189014.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Rosa
chinensis]
Length = 528
Score = 223 bits (569), Expect = 3e-67
Identities = 105/131 (80%), Positives = 120/131 (91%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
++ +L+ V+SRL++Q+ REPTLVEWAEA G SC +LQSQ+ G SSR+KLIYAN RMVVH
Sbjct: 243 DVFELEAVKSRLQSQYGREPTLVEWAEAVGISCQMLQSQLRSGTSSREKLIYANLRMVVH 302
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGL LQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWW+RQ+IRKA+FQHSRT
Sbjct: 303 IAKQYQGRGLGLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWVRQTIRKAIFQHSRT 362
Query: 535 IRLPENVYSLL 567
IRLPENVY+LL
Sbjct: 363 IRLPENVYTLL 373
>ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X4 [Nelumbo nucifera]
Length = 525
Score = 223 bits (568), Expect = 3e-67
Identities = 104/131 (79%), Positives = 122/131 (93%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
EL++L+EV+ RL++QF REPTLVEWAEA G +C LQS +H GNSSR+K+IYANFR+VVH
Sbjct: 241 ELIRLEEVKQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSGNSSREKIIYANFRLVVH 300
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
+AK YQG+GL+LQDLLQEGSMGLMKS+EKFKPQAGCRFATYAYWWIRQ+IRKA+FQ+SRT
Sbjct: 301 VAKHYQGQGLNLQDLLQEGSMGLMKSLEKFKPQAGCRFATYAYWWIRQAIRKAIFQNSRT 360
Query: 535 IRLPENVYSLL 567
IRLPENVYSLL
Sbjct: 361 IRLPENVYSLL 371
>ref|XP_024189013.1| RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Rosa
chinensis]
gb|PRQ43585.1| putative RNA polymerase sigma-70 like domain, RNA polymerase sigma
factor, SigB/C/D/F, plastid [Rosa chinensis]
Length = 555
Score = 223 bits (569), Expect = 5e-67
Identities = 105/131 (80%), Positives = 120/131 (91%)
Frame = +1
Query: 175 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 354
++ +L+ V+SRL++Q+ REPTLVEWAEA G SC +LQSQ+ G SSR+KLIYAN RMVVH
Sbjct: 270 DVFELEAVKSRLQSQYGREPTLVEWAEAVGISCQMLQSQLRSGTSSREKLIYANLRMVVH 329
Query: 355 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 534
IAKQYQGRGL LQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWW+RQ+IRKA+FQHSRT
Sbjct: 330 IAKQYQGRGLGLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWVRQTIRKAIFQHSRT 389
Query: 535 IRLPENVYSLL 567
IRLPENVY+LL
Sbjct: 390 IRLPENVYTLL 400