BLASTX nr result

ID: Rehmannia29_contig00005320 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00005320
         (612 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011072693.1| pumilio homolog 23 isoform X2 [Sesamum indic...    92   5e-18
ref|XP_011072692.1| pumilio homolog 23 isoform X1 [Sesamum indicum]    92   5e-18
gb|PIN13745.1| putative RNA-binding protein [Handroanthus impeti...    88   1e-16
gb|EYU21269.1| hypothetical protein MIMGU_mgv1a002768mg [Erythra...    80   9e-14
ref|XP_012856533.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homo...    80   1e-13

>ref|XP_011072693.1| pumilio homolog 23 isoform X2 [Sesamum indicum]
 ref|XP_011072694.1| pumilio homolog 23 isoform X2 [Sesamum indicum]
          Length = 748

 Score = 92.0 bits (227), Expect = 5e-18
 Identities = 49/96 (51%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
 Frame = +1

Query: 4   TGSPFLAHQGSTRLKKSGNKQVPDGRRFSKDDD-NFFKSNSKKHKLEKASSSTKNSNDGE 180
           +GSPFLAHQGS   KK+GNKQVP+GR F +D   + F+S SK+HK+EK S S+KN+NDGE
Sbjct: 653 SGSPFLAHQGSGGPKKTGNKQVPEGREFPRDVGYDSFQSKSKRHKVEKTSISSKNNNDGE 712

Query: 181 ILHDEKLSTTKNEXXXXXXXXXXXXXXXXXXAGITD 288
            LH +K S+ KNE                  AGI+D
Sbjct: 713 TLHGDKSSSIKNEKKRRRKDGLSNSLDKKLKAGISD 748


>ref|XP_011072692.1| pumilio homolog 23 isoform X1 [Sesamum indicum]
          Length = 789

 Score = 92.0 bits (227), Expect = 5e-18
 Identities = 49/96 (51%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
 Frame = +1

Query: 4   TGSPFLAHQGSTRLKKSGNKQVPDGRRFSKDDD-NFFKSNSKKHKLEKASSSTKNSNDGE 180
           +GSPFLAHQGS   KK+GNKQVP+GR F +D   + F+S SK+HK+EK S S+KN+NDGE
Sbjct: 694 SGSPFLAHQGSGGPKKTGNKQVPEGREFPRDVGYDSFQSKSKRHKVEKTSISSKNNNDGE 753

Query: 181 ILHDEKLSTTKNEXXXXXXXXXXXXXXXXXXAGITD 288
            LH +K S+ KNE                  AGI+D
Sbjct: 754 TLHGDKSSSIKNEKKRRRKDGLSNSLDKKLKAGISD 789


>gb|PIN13745.1| putative RNA-binding protein [Handroanthus impetiginosus]
          Length = 794

 Score = 88.2 bits (217), Expect = 1e-16
 Identities = 49/75 (65%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
 Frame = +1

Query: 1   NTGSPFLAHQG-STRLKKSGNKQVPDGRRFSKD-DDNFFKSNSKKHKLEKASSSTKNSND 174
           + G+PFLAHQG ST+ KKS NKQ P+ R F KD DDN FKS SK+ K EKASSSTK +ND
Sbjct: 698 SNGTPFLAHQGRSTKPKKSRNKQSPESRGFHKDVDDNSFKSKSKERKTEKASSSTKTTND 757

Query: 175 GEILHDEKLSTTKNE 219
           GEI+  EKLST   E
Sbjct: 758 GEIVLGEKLSTHTTE 772


>gb|EYU21269.1| hypothetical protein MIMGU_mgv1a002768mg [Erythranthe guttata]
          Length = 639

 Score = 79.7 bits (195), Expect = 9e-14
 Identities = 43/70 (61%), Positives = 51/70 (72%)
 Frame = +1

Query: 10  SPFLAHQGSTRLKKSGNKQVPDGRRFSKDDDNFFKSNSKKHKLEKASSSTKNSNDGEILH 189
           SPFLAHQG    KKSGNK VP+GR F+KDD+N   S SK+HK  K  +ST+N+N GEI H
Sbjct: 553 SPFLAHQGKP--KKSGNKHVPEGRGFAKDDENL--SKSKRHKTGKTGNSTENNNGGEI-H 607

Query: 190 DEKLSTTKNE 219
           DEK ST K +
Sbjct: 608 DEKSSTVKEK 617


>ref|XP_012856533.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 23 [Erythranthe
           guttata]
          Length = 784

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 43/70 (61%), Positives = 51/70 (72%)
 Frame = +1

Query: 10  SPFLAHQGSTRLKKSGNKQVPDGRRFSKDDDNFFKSNSKKHKLEKASSSTKNSNDGEILH 189
           SPFLAHQG    KKSGNK VP+GR F+KDD+N   S SK+HK  K  +ST+N+N GEI H
Sbjct: 698 SPFLAHQGKP--KKSGNKHVPEGRGFAKDDENL--SKSKRHKTGKTGNSTENNNGGEI-H 752

Query: 190 DEKLSTTKNE 219
           DEK ST K +
Sbjct: 753 DEKSSTVKEK 762


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