BLASTX nr result

ID: Rehmannia29_contig00004894 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00004894
         (439 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65163.1| hypothetical protein VITISV_002453 [Vitis vinifera]    56   2e-06
ref|XP_010652208.1| PREDICTED: early nodulin-75 [Vitis vinifera]       56   2e-06
emb|CBI36890.3| unnamed protein product, partial [Vitis vinifera]      56   2e-06

>emb|CAN65163.1| hypothetical protein VITISV_002453 [Vitis vinifera]
          Length = 382

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 38/90 (42%), Positives = 46/90 (51%)
 Frame = +3

Query: 6   VEMPK*IYNIGFVPKVFVEMPK*MNNTGFVSRCLLKCPSE*TI*NFVPTVFVEMPK*MNN 185
           VE PK  YN G+VPK  VE PK   N G+V +  ++ P       +VP   VE PK   N
Sbjct: 135 VEKPKPEYNNGYVPKPEVEKPKPEYNNGYVPKPEVEKPKPEYNNRYVPKPEVEKPKPEYN 194

Query: 186 IGFVPKVFVEMPK*MNIIGFVPNVFVGMPK 275
            G+VPK   E PK     G+VP   V  PK
Sbjct: 195 NGYVPKPETEKPKPEYNNGYVPKPEVEKPK 224


>ref|XP_010652208.1| PREDICTED: early nodulin-75 [Vitis vinifera]
          Length = 382

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 38/90 (42%), Positives = 46/90 (51%)
 Frame = +3

Query: 6   VEMPK*IYNIGFVPKVFVEMPK*MNNTGFVSRCLLKCPSE*TI*NFVPTVFVEMPK*MNN 185
           VE PK  YN G+VPK  VE PK   N G+V +  ++ P       +VP   VE PK   N
Sbjct: 135 VEKPKPEYNNGYVPKPEVEKPKPEYNNGYVPKPEVEKPKPEYNNRYVPKPEVEKPKPEYN 194

Query: 186 IGFVPKVFVEMPK*MNIIGFVPNVFVGMPK 275
            G+VPK   E PK     G+VP   V  PK
Sbjct: 195 NGYVPKPETEKPKPEYNNGYVPKPEVEKPK 224


>emb|CBI36890.3| unnamed protein product, partial [Vitis vinifera]
          Length = 408

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 38/90 (42%), Positives = 46/90 (51%)
 Frame = +3

Query: 6   VEMPK*IYNIGFVPKVFVEMPK*MNNTGFVSRCLLKCPSE*TI*NFVPTVFVEMPK*MNN 185
           VE PK  YN G+VPK  VE PK   N G+V +  ++ P       +VP   VE PK   N
Sbjct: 161 VEKPKPEYNNGYVPKPEVEKPKPEYNNGYVPKPEVEKPKPEYNNRYVPKPEVEKPKPEYN 220

Query: 186 IGFVPKVFVEMPK*MNIIGFVPNVFVGMPK 275
            G+VPK   E PK     G+VP   V  PK
Sbjct: 221 NGYVPKPETEKPKPEYNNGYVPKPEVEKPK 250


Top