BLASTX nr result

ID: Rehmannia29_contig00004678 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00004678
         (790 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011090002.1| uncharacterized protein At4g22758-like [Sesa...    44   1e-07
ref|XP_024158428.1| uncharacterized protein LOC112165947 [Rosa c...    45   1e-06
ref|XP_004294037.1| PREDICTED: uncharacterized protein LOC101299...    43   2e-06

>ref|XP_011090002.1| uncharacterized protein At4g22758-like [Sesamum indicum]
          Length = 193

 Score = 43.5 bits (101), Expect(2) = 1e-07
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = -2

Query: 501 LDRSEKLMELGSRNFFLCPK 442
           LDR EKLMELGSRNFFLCPK
Sbjct: 137 LDREEKLMELGSRNFFLCPK 156



 Score = 41.2 bits (95), Expect(2) = 1e-07
 Identities = 23/37 (62%), Positives = 23/37 (62%)
 Frame = -3

Query: 434 ESGGXXXXXXXALNCSKEADKAIKKGLIWLKFMDCLL 324
           ESGG         NCSKEA  A KKGL WLKFMD LL
Sbjct: 161 ESGGAAVTS----NCSKEAGPATKKGLPWLKFMDFLL 193


>ref|XP_024158428.1| uncharacterized protein LOC112165947 [Rosa chinensis]
 gb|PRQ33233.1| hypothetical protein RchiOBHm_Chr5g0055301 [Rosa chinensis]
          Length = 203

 Score = 45.1 bits (105), Expect(2) = 1e-06
 Identities = 24/41 (58%), Positives = 25/41 (60%)
 Frame = -2

Query: 501 LDRSEKLMELGSRNFFLCPKXXGKWWRSYNGGGGFKLFEGS 379
           LDR EKLMELGSRNFFLCPK         + GGG     GS
Sbjct: 142 LDREEKLMELGSRNFFLCPKKSAA--DGGSSGGGITTSSGS 180



 Score = 36.2 bits (82), Expect(2) = 1e-06
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -3

Query: 395 NCSKEADKAIKKGLIWLKFMDCLL 324
           +CSK+ +KA K G  WLKFMD LL
Sbjct: 180 SCSKQVEKASKTGFSWLKFMDSLL 203


>ref|XP_004294037.1| PREDICTED: uncharacterized protein LOC101299937 [Fragaria vesca
           subsp. vesca]
          Length = 200

 Score = 42.7 bits (99), Expect(2) = 2e-06
 Identities = 21/32 (65%), Positives = 21/32 (65%)
 Frame = -2

Query: 501 LDRSEKLMELGSRNFFLCPKXXGKWWRSYNGG 406
           LDR EKLM LGSRNFFLCPK       S  GG
Sbjct: 139 LDREEKLMTLGSRNFFLCPKKSAVDGESCGGG 170



 Score = 37.7 bits (86), Expect(2) = 2e-06
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = -3

Query: 395 NCSKEADKAIKKGLIWLKFMDCLL 324
           +CSK+A+KA K G  WLKFMD LL
Sbjct: 177 SCSKQAEKASKTGFSWLKFMDSLL 200


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