BLASTX nr result
ID: Rehmannia29_contig00004634
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00004634
(734 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY28254.1| DNA-directed RNA polymerase family protein isofor... 472 e-160
gb|KDP20966.1| hypothetical protein JCGZ_21437 [Jatropha curcas] 469 e-158
ref|XP_022874083.1| DNA-directed RNA polymerase II subunit RPB2-... 471 e-157
gb|KJB68625.1| hypothetical protein B456_010G255400 [Gossypium r... 472 e-157
gb|AAZ08459.1| RNA polymerase II second largest subunit, partial... 469 e-157
gb|KDO44202.1| hypothetical protein CISIN_1g000996mg [Citrus sin... 465 e-157
gb|KRH37432.1| hypothetical protein GLYMA_09G066000 [Glycine max] 466 e-156
ref|XP_012830376.1| PREDICTED: DNA-directed RNA polymerase II su... 474 e-156
ref|XP_022723358.1| DNA-directed RNA polymerase II subunit RPB2 ... 472 e-156
ref|XP_021902259.1| DNA-directed RNA polymerase II subunit RPB2,... 469 e-156
gb|PNY09668.1| DNA-directed RNA polymerase ii subunit rpb2-like ... 457 e-156
gb|KZV51965.1| DNA-directed RNA polymerase II subunit [Dorcocera... 473 e-156
gb|PPD66175.1| hypothetical protein GOBAR_DD36945 [Gossypium bar... 472 e-156
gb|PPD95676.1| hypothetical protein GOBAR_DD07285 [Gossypium bar... 472 e-156
ref|XP_011096303.1| DNA-directed RNA polymerase II subunit RPB2 ... 473 e-156
gb|AAY85200.1| RNA polymerase II second largest subunit, partial... 466 e-156
ref|XP_022723357.1| DNA-directed RNA polymerase II subunit RPB2 ... 472 e-156
ref|XP_021294485.1| DNA-directed RNA polymerase II subunit RPB2 ... 472 e-156
ref|XP_016751986.1| PREDICTED: DNA-directed RNA polymerase II su... 472 e-156
ref|XP_012449722.1| PREDICTED: DNA-directed RNA polymerase II su... 472 e-156
>gb|EOY28254.1| DNA-directed RNA polymerase family protein isoform 2 [Theobroma
cacao]
Length = 809
Score = 472 bits (1215), Expect = e-160
Identities = 234/244 (95%), Positives = 236/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 51 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 110
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 111 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 170
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVG+H
Sbjct: 171 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVH 230
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
RNPDMLV+T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 231 RNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 290
Query: 721 DIQA 732
DI A
Sbjct: 291 DIHA 294
>gb|KDP20966.1| hypothetical protein JCGZ_21437 [Jatropha curcas]
Length = 841
Score = 469 bits (1207), Expect = e-158
Identities = 233/244 (95%), Positives = 235/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLT+DVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 51 GPLLGGLFRMLFRKLTKDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 110
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 111 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 170
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 171 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 230
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
R+PDMLV T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 231 RDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 290
Query: 721 DIQA 732
DI A
Sbjct: 291 DIHA 294
>ref|XP_022874083.1| DNA-directed RNA polymerase II subunit RPB2-like [Olea europaea var.
sylvestris]
Length = 972
Score = 471 bits (1212), Expect = e-157
Identities = 234/244 (95%), Positives = 236/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 400 GPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 459
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 460 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 519
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 520 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 579
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
R+PDMLV T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 580 RDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 639
Query: 721 DIQA 732
DIQA
Sbjct: 640 DIQA 643
>gb|KJB68625.1| hypothetical protein B456_010G255400 [Gossypium raimondii]
Length = 1021
Score = 472 bits (1215), Expect = e-157
Identities = 234/244 (95%), Positives = 236/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 401 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 460
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 461 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 520
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVG+H
Sbjct: 521 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVH 580
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
RNPDMLV+T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 581 RNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 640
Query: 721 DIQA 732
DI A
Sbjct: 641 DIHA 644
>gb|AAZ08459.1| RNA polymerase II second largest subunit, partial [Astilbe sp.
Yoshikawa s.n.]
Length = 951
Score = 469 bits (1208), Expect = e-157
Identities = 233/244 (95%), Positives = 235/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 297 GPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 356
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 357 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 416
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIP+ATKIFVNGCWVGIH
Sbjct: 417 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPEATKIFVNGCWVGIH 476
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
R+PDMLV T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 477 RDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 536
Query: 721 DIQA 732
DIQA
Sbjct: 537 DIQA 540
>gb|KDO44202.1| hypothetical protein CISIN_1g000996mg [Citrus sinensis]
Length = 842
Score = 465 bits (1197), Expect = e-157
Identities = 231/244 (94%), Positives = 235/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 51 GPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 110
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 111 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 170
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 171 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 230
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
R+P+MLV T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKK+
Sbjct: 231 RDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKR 290
Query: 721 DIQA 732
DI A
Sbjct: 291 DIIA 294
>gb|KRH37432.1| hypothetical protein GLYMA_09G066000 [Glycine max]
Length = 889
Score = 466 bits (1199), Expect = e-156
Identities = 231/244 (94%), Positives = 234/244 (95%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 101 GPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 160
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 161 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 220
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCW+GIH
Sbjct: 221 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIH 280
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
R+PDMLV T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKK
Sbjct: 281 RDPDMLVRTLKKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKK 340
Query: 721 DIQA 732
DI A
Sbjct: 341 DIHA 344
>ref|XP_012830376.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Erythranthe
guttata]
gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Erythranthe guttata]
Length = 1197
Score = 474 bits (1220), Expect = e-156
Identities = 236/244 (96%), Positives = 236/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 406 GPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 465
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 466 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 525
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 526 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 585
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
RNPDMLVST VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 586 RNPDMLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 645
Query: 721 DIQA 732
DIQA
Sbjct: 646 DIQA 649
>ref|XP_022723358.1| DNA-directed RNA polymerase II subunit RPB2 isoform X2 [Durio
zibethinus]
Length = 1131
Score = 472 bits (1215), Expect = e-156
Identities = 234/244 (95%), Positives = 236/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 401 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 460
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 461 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 520
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVG+H
Sbjct: 521 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVH 580
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
RNPDMLV+T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 581 RNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 640
Query: 721 DIQA 732
DI A
Sbjct: 641 DIHA 644
>ref|XP_021902259.1| DNA-directed RNA polymerase II subunit RPB2, partial [Carica papaya]
Length = 1018
Score = 469 bits (1207), Expect = e-156
Identities = 233/244 (95%), Positives = 235/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 401 GPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 460
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 461 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 520
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 521 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 580
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
R+PDMLV T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 581 RDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 640
Query: 721 DIQA 732
DI A
Sbjct: 641 DIHA 644
>gb|PNY09668.1| DNA-directed RNA polymerase ii subunit rpb2-like protein, partial
[Trifolium pratense]
Length = 628
Score = 457 bits (1175), Expect = e-156
Identities = 226/238 (94%), Positives = 229/238 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 391 GPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 450
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 451 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 510
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCW+GIH
Sbjct: 511 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIH 570
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIK 714
R+PDMLV T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIK
Sbjct: 571 RDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIK 628
>gb|KZV51965.1| DNA-directed RNA polymerase II subunit [Dorcoceras hygrometricum]
Length = 1194
Score = 473 bits (1218), Expect = e-156
Identities = 235/244 (96%), Positives = 237/244 (97%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 404 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 463
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 464 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 523
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQ+TKIFVNGCWVGIH
Sbjct: 524 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIH 583
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
RNPDMLVST VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI+KK
Sbjct: 584 RNPDMLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRKK 643
Query: 721 DIQA 732
DIQA
Sbjct: 644 DIQA 647
>gb|PPD66175.1| hypothetical protein GOBAR_DD36945 [Gossypium barbadense]
Length = 1161
Score = 472 bits (1215), Expect = e-156
Identities = 234/244 (95%), Positives = 236/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 401 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 460
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 461 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 520
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVG+H
Sbjct: 521 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVH 580
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
RNPDMLV+T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 581 RNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 640
Query: 721 DIQA 732
DI A
Sbjct: 641 DIHA 644
>gb|PPD95676.1| hypothetical protein GOBAR_DD07285 [Gossypium barbadense]
Length = 1167
Score = 472 bits (1215), Expect = e-156
Identities = 234/244 (95%), Positives = 236/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 401 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 460
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 461 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 520
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVG+H
Sbjct: 521 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVH 580
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
RNPDMLV+T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 581 RNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 640
Query: 721 DIQA 732
DI A
Sbjct: 641 DIHA 644
>ref|XP_011096303.1| DNA-directed RNA polymerase II subunit RPB2 [Sesamum indicum]
Length = 1193
Score = 473 bits (1216), Expect = e-156
Identities = 235/244 (96%), Positives = 237/244 (97%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 403 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 462
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 463 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 522
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENF+EISPAVIPQATKIFVNGCWVGIH
Sbjct: 523 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFKEISPAVIPQATKIFVNGCWVGIH 582
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
RNPDMLVST VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 583 RNPDMLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 642
Query: 721 DIQA 732
DI+A
Sbjct: 643 DIRA 646
>gb|AAY85200.1| RNA polymerase II second largest subunit, partial [Coriaria
sarmentosa]
Length = 952
Score = 466 bits (1199), Expect = e-156
Identities = 231/244 (94%), Positives = 233/244 (95%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 297 GPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 356
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 357 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 416
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH
Sbjct: 417 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 476
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
R PDMLV T VDVNTEVGVVRDIRL+ELRIYTDYGRCSRPLFIVEKQRLLI+KK
Sbjct: 477 REPDMLVKTLRRLRRRVDVNTEVGVVRDIRLRELRIYTDYGRCSRPLFIVEKQRLLIRKK 536
Query: 721 DIQA 732
DI A
Sbjct: 537 DIHA 540
>ref|XP_022723357.1| DNA-directed RNA polymerase II subunit RPB2 isoform X1 [Durio
zibethinus]
Length = 1189
Score = 472 bits (1215), Expect = e-156
Identities = 234/244 (95%), Positives = 236/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 401 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 460
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 461 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 520
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVG+H
Sbjct: 521 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVH 580
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
RNPDMLV+T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 581 RNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 640
Query: 721 DIQA 732
DI A
Sbjct: 641 DIHA 644
>ref|XP_021294485.1| DNA-directed RNA polymerase II subunit RPB2 [Herrania umbratica]
Length = 1189
Score = 472 bits (1215), Expect = e-156
Identities = 234/244 (95%), Positives = 236/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 401 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 460
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 461 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 520
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVG+H
Sbjct: 521 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVH 580
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
RNPDMLV+T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 581 RNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 640
Query: 721 DIQA 732
DI A
Sbjct: 641 DIHA 644
>ref|XP_016751986.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
hirsutum]
ref|XP_016751987.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
hirsutum]
ref|XP_016751988.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
hirsutum]
Length = 1189
Score = 472 bits (1215), Expect = e-156
Identities = 234/244 (95%), Positives = 236/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 401 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 460
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 461 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 520
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVG+H
Sbjct: 521 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVH 580
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
RNPDMLV+T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 581 RNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 640
Query: 721 DIQA 732
DI A
Sbjct: 641 DIHA 644
>ref|XP_012449722.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
raimondii]
ref|XP_012449723.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
raimondii]
ref|XP_017641873.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
arboreum]
ref|XP_017641874.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
arboreum]
gb|KHG27061.1| DNA-directed RNA polymerase II subunit RPB2 [Gossypium arboreum]
gb|KJB68623.1| hypothetical protein B456_010G255400 [Gossypium raimondii]
gb|KJB68624.1| hypothetical protein B456_010G255400 [Gossypium raimondii]
gb|PPS13790.1| hypothetical protein GOBAR_AA06752 [Gossypium barbadense]
Length = 1189
Score = 472 bits (1215), Expect = e-156
Identities = 234/244 (95%), Positives = 236/244 (96%)
Frame = +1
Query: 1 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 180
GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA
Sbjct: 401 GPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQA 460
Query: 181 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 360
NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG
Sbjct: 461 NAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEG 520
Query: 361 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIH 540
QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVG+H
Sbjct: 521 QACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVH 580
Query: 541 RNPDMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 720
RNPDMLV+T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK
Sbjct: 581 RNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKK 640
Query: 721 DIQA 732
DI A
Sbjct: 641 DIHA 644