BLASTX nr result

ID: Rehmannia29_contig00004070 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00004070
         (422 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AKV71979.1| MYB-related protein [Rehmannia glutinosa]               79   8e-15

>gb|AKV71979.1| MYB-related protein [Rehmannia glutinosa]
          Length = 260

 Score = 78.6 bits (192), Expect = 8e-15
 Identities = 44/70 (62%), Positives = 44/70 (62%)
 Frame = +1

Query: 1   VNNSSAMLVHQVPVVPMSTSSTMFDLNLNQQVMXXXXXXXXXXXXXXXXXXXXXXXXXXF 180
           VNNSSAMLVHQVPVVPMSTSSTMFDLNLNQQVM                          F
Sbjct: 191 VNNSSAMLVHQVPVVPMSTSSTMFDLNLNQQVMLEPSPLSLRLSLSSGQEPSSSQVISSF 250

Query: 181 KNGDNIISVA 210
           KNGDNIISVA
Sbjct: 251 KNGDNIISVA 260


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