BLASTX nr result
ID: Rehmannia29_contig00004036
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00004036
(612 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIM99566.1| RNA polymerase II transcription mediator [Handroa... 83 9e-15
gb|KZV57645.1| mediator of RNA polymerase II transcription subun... 73 2e-11
gb|PIN22837.1| RNA polymerase II transcription mediator [Handroa... 71 9e-11
ref|XP_011092394.1| mediator of RNA polymerase II transcription ... 71 1e-10
ref|XP_011092371.1| mediator of RNA polymerase II transcription ... 71 1e-10
gb|OMP00404.1| Mediator complex, subunit Med12 [Corchorus olitor... 70 2e-10
gb|OMO78777.1| Mediator complex, subunit Med12 [Corchorus capsul... 70 2e-10
ref|XP_022859138.1| mediator of RNA polymerase II transcription ... 69 7e-10
ref|XP_022757340.1| mediator of RNA polymerase II transcription ... 68 1e-09
ref|XP_022895907.1| mediator of RNA polymerase II transcription ... 68 1e-09
gb|KVH91124.1| Mediator complex, subunit Med12 [Cynara carduncul... 68 1e-09
gb|EOX95958.1| Mediator of RNA polymerase II transcription subun... 68 1e-09
ref|XP_007051802.2| PREDICTED: mediator of RNA polymerase II tra... 68 1e-09
gb|EOX95959.1| Mediator of RNA polymerase II transcription subun... 68 1e-09
gb|EOX95957.1| Mediator of RNA polymerase II transcription subun... 68 1e-09
gb|PPD66397.1| hypothetical protein GOBAR_DD36722 [Gossypium bar... 66 4e-09
gb|KJB38933.1| hypothetical protein B456_007G099500 [Gossypium r... 66 4e-09
gb|PPD90270.1| hypothetical protein GOBAR_DD12773 [Gossypium bar... 66 4e-09
ref|XP_007135071.1| hypothetical protein PHAVU_010G099000g [Phas... 66 4e-09
gb|KJB38926.1| hypothetical protein B456_007G099500 [Gossypium r... 66 4e-09
>gb|PIM99566.1| RNA polymerase II transcription mediator [Handroanthus
impetiginosus]
Length = 2219
Score = 82.8 bits (203), Expect = 9e-15
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYHAGNCTSAVN++AIGGIQARDTSRAESPAVPPN+SLN
Sbjct: 1 MQRYHAGNCTSAVNNNAIGGIQARDTSRAESPAVPPNYSLN 41
>gb|KZV57645.1| mediator of RNA polymerase II transcription subunit 12-like
[Dorcoceras hygrometricum]
Length = 2226
Score = 73.2 bits (178), Expect = 2e-11
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYH+G+CTSAVN SAI GIQAR+TSRA+S AVPPNFSLN
Sbjct: 1 MQRYHSGSCTSAVNSSAISGIQARETSRADSSAVPPNFSLN 41
>gb|PIN22837.1| RNA polymerase II transcription mediator [Handroanthus
impetiginosus]
Length = 2189
Score = 71.2 bits (173), Expect = 9e-11
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYHAGNCTSAVN+SAI GIQ RDTSRA+S +P NFSLN
Sbjct: 1 MQRYHAGNCTSAVNNSAITGIQGRDTSRADSSTIPSNFSLN 41
>ref|XP_011092394.1| mediator of RNA polymerase II transcription subunit 12 isoform X2
[Sesamum indicum]
Length = 2191
Score = 70.9 bits (172), Expect = 1e-10
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYHAG+CTSAVN+SAI GIQARDTSRA+ AV PNFSLN
Sbjct: 1 MQRYHAGSCTSAVNNSAITGIQARDTSRADPSAVSPNFSLN 41
>ref|XP_011092371.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Sesamum indicum]
ref|XP_011092379.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Sesamum indicum]
ref|XP_011092387.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Sesamum indicum]
Length = 2221
Score = 70.9 bits (172), Expect = 1e-10
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYHAG+CTSAVN+SAI GIQARDTSRA+ AV PNFSLN
Sbjct: 1 MQRYHAGSCTSAVNNSAITGIQARDTSRADPSAVSPNFSLN 41
>gb|OMP00404.1| Mediator complex, subunit Med12 [Corchorus olitorius]
Length = 2189
Score = 70.1 bits (170), Expect = 2e-10
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYH NCTSAVN+SAIGG ARDTSRA+S +PPNFSLN
Sbjct: 1 MQRYHPANCTSAVNNSAIGGASARDTSRADSSTLPPNFSLN 41
>gb|OMO78777.1| Mediator complex, subunit Med12 [Corchorus capsularis]
Length = 2258
Score = 70.1 bits (170), Expect = 2e-10
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYH NCTSAVN+SAIGG ARDTSRA+S +PPNFSLN
Sbjct: 1 MQRYHPANCTSAVNNSAIGGASARDTSRADSSTLPPNFSLN 41
>ref|XP_022859138.1| mediator of RNA polymerase II transcription subunit 12-like [Olea
europaea var. sylvestris]
Length = 2274
Score = 68.6 bits (166), Expect = 7e-10
Identities = 34/43 (79%), Positives = 37/43 (86%), Gaps = 2/43 (4%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPP--NFSLN 6
MQRYHAG+CTSAVN+ +IGGI ARDTSRAES VPP NFSLN
Sbjct: 1 MQRYHAGSCTSAVNNGSIGGIPARDTSRAESSVVPPPANFSLN 43
>ref|XP_022757340.1| mediator of RNA polymerase II transcription subunit 12-like isoform
X1 [Durio zibethinus]
ref|XP_022757341.1| mediator of RNA polymerase II transcription subunit 12-like isoform
X1 [Durio zibethinus]
Length = 2249
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/41 (73%), Positives = 37/41 (90%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYHA +CTSAVN+SAIGG ARDT+RA++ ++PPNFSLN
Sbjct: 1 MQRYHAASCTSAVNNSAIGGASARDTARADASSLPPNFSLN 41
>ref|XP_022895907.1| mediator of RNA polymerase II transcription subunit 12-like [Olea
europaea var. sylvestris]
Length = 2211
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/43 (79%), Positives = 36/43 (83%), Gaps = 2/43 (4%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAV--PPNFSLN 6
MQRYHAG C SAVN+ +IGGI ARDTSRAES AV PPNFSLN
Sbjct: 1 MQRYHAGGCNSAVNNGSIGGIPARDTSRAESSAVLPPPNFSLN 43
>gb|KVH91124.1| Mediator complex, subunit Med12 [Cynara cardunculus var. scolymus]
Length = 2236
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = -2
Query: 131 EMQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
EMQRYHA NCTSAVN+SA+GG RDTSRAES A+P NF LN
Sbjct: 46 EMQRYHATNCTSAVNNSAVGGSLGRDTSRAESSALPANFPLN 87
>gb|EOX95958.1| Mediator of RNA polymerase II transcription subunit 12 isoform 2
[Theobroma cacao]
Length = 2237
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYHA +CTSAVN+S IGG ARDT+RA+S ++PPNFSLN
Sbjct: 1 MQRYHAASCTSAVNNSGIGGASARDTARADSSSLPPNFSLN 41
>ref|XP_007051802.2| PREDICTED: mediator of RNA polymerase II transcription subunit 12
[Theobroma cacao]
ref|XP_017980839.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
[Theobroma cacao]
Length = 2257
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYHA +CTSAVN+S IGG ARDT+RA+S ++PPNFSLN
Sbjct: 1 MQRYHAASCTSAVNNSGIGGASARDTARADSSSLPPNFSLN 41
>gb|EOX95959.1| Mediator of RNA polymerase II transcription subunit 12 isoform 3
[Theobroma cacao]
Length = 2257
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYHA +CTSAVN+S IGG ARDT+RA+S ++PPNFSLN
Sbjct: 1 MQRYHAASCTSAVNNSGIGGASARDTARADSSSLPPNFSLN 41
>gb|EOX95957.1| Mediator of RNA polymerase II transcription subunit 12 isoform 1
[Theobroma cacao]
Length = 2261
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYHA +CTSAVN+S IGG ARDT+RA+S ++PPNFSLN
Sbjct: 1 MQRYHAASCTSAVNNSGIGGASARDTARADSSSLPPNFSLN 41
>gb|PPD66397.1| hypothetical protein GOBAR_DD36722 [Gossypium barbadense]
Length = 1811
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYHA +CTSAVN+SAIGG RDT RA+S ++PPNFSLN
Sbjct: 1 MQRYHAPSCTSAVNNSAIGGASVRDTPRADSSSLPPNFSLN 41
>gb|KJB38933.1| hypothetical protein B456_007G099500 [Gossypium raimondii]
Length = 2110
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYHA +CTSAVN+SAIGG RDT RA+S ++PPNFSLN
Sbjct: 1 MQRYHAPSCTSAVNNSAIGGASVRDTPRADSSSLPPNFSLN 41
>gb|PPD90270.1| hypothetical protein GOBAR_DD12773 [Gossypium barbadense]
Length = 2197
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYHA +CTSAVN+SAIGG RDT RA+S ++PPNFSLN
Sbjct: 1 MQRYHAPSCTSAVNNSAIGGASVRDTPRADSSSLPPNFSLN 41
>ref|XP_007135071.1| hypothetical protein PHAVU_010G099000g [Phaseolus vulgaris]
gb|ESW07065.1| hypothetical protein PHAVU_010G099000g [Phaseolus vulgaris]
Length = 2215
Score = 66.2 bits (160), Expect = 4e-09
Identities = 29/41 (70%), Positives = 37/41 (90%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYHAG+CTSAVN+SAIGG ARDT R++SP++P NFS++
Sbjct: 1 MQRYHAGSCTSAVNNSAIGGPSARDTGRSDSPSLPANFSVS 41
>gb|KJB38926.1| hypothetical protein B456_007G099500 [Gossypium raimondii]
gb|KJB38927.1| hypothetical protein B456_007G099500 [Gossypium raimondii]
gb|KJB38932.1| hypothetical protein B456_007G099500 [Gossypium raimondii]
Length = 2220
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -2
Query: 128 MQRYHAGNCTSAVNHSAIGGIQARDTSRAESPAVPPNFSLN 6
MQRYHA +CTSAVN+SAIGG RDT RA+S ++PPNFSLN
Sbjct: 1 MQRYHAPSCTSAVNNSAIGGASVRDTPRADSSSLPPNFSLN 41