BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00003909
         (480 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondr...   105   4e-26
gb|PON97528.1| Ribonuclease H [Trema orientalis]                       99   1e-22
gb|PON53282.1| Ribonuclease H-like domain containing protein, pa...    95   2e-22
gb|PON85873.1| Ribonuclease H [Trema orientalis]                       99   8e-22
gb|PON60250.1| Ribonuclease H-like domain containing protein, pa...    87   1e-18
gb|PON37013.1| Ribonuclease H, partial [Trema orientalis]              87   1e-18
gb|POO02039.1| Ribonuclease H, partial [Trema orientalis]              86   7e-17
gb|PRQ57777.1| putative ribonuclease H-like domain-containing pr...    81   5e-16
gb|PRQ23719.1| putative ribonuclease H-like domain-containing pr...    81   5e-16
gb|PON58619.1| Ribonuclease H-like domain containing protein [Pa...    79   9e-16
gb|PON43417.1| Ribonuclease H, partial [Parasponia andersonii]         80   1e-15
gb|PON47283.1| Ribonuclease H, partial [Parasponia andersonii]         80   2e-15
ref|XP_019430046.1| PREDICTED: uncharacterized protein LOC109337...    77   2e-15
gb|PON97562.1| Ribonuclease H-like domain containing protein [Tr...    81   3e-15
ref|XP_011465738.1| PREDICTED: uncharacterized protein LOC105351...    79   2e-14
gb|PON76913.1| Ribonuclease H-like domain containing protein [Pa...    75   2e-14
gb|PRQ42584.1| putative ribonuclease H-like domain-containing pr...    72   2e-13
gb|PRQ42881.1| putative ribonuclease H-like domain, reverse tran...    77   2e-13
ref|XP_019423006.1| PREDICTED: uncharacterized protein LOC109332...    76   4e-13
ref|XP_024190007.1| uncharacterized protein LOC112193973 [Rosa c...    76   4e-13

>ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondrion) [Salvia
           miltiorrhiza]
 gb|AGU16584.1| hypothetical protein Salmi_Mp055 (mitochondrion) [Salvia
           miltiorrhiza]
          Length = 119

 Score =  105 bits (261), Expect = 4e-26
 Identities = 49/101 (48%), Positives = 68/101 (67%)
 Frame = +2

Query: 17  ITFLQGDYNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREG 196
           I F +G ++ LW+ESDS+Y+V LLR +S  VPW H + W YTLHL+ QM+ VV+HIFREG
Sbjct: 18  IAFSKG-WHSLWIESDSIYVVSLLRSRSMIVPWNHRNRWLYTLHLIRQMNIVVTHIFREG 76

Query: 197 NQAADILSKSSQVDTWWGSPPTSIIQSLTQDYVGQSNYRFV 319
           N  AD L+ ++    WW S P  I  ++ +D  G S +RF+
Sbjct: 77  NHVADALANAAGDLKWWNSMPDFISSAVYRDIAGVSFFRFI 117


>gb|PON97528.1| Ribonuclease H [Trema orientalis]
          Length = 196

 Score = 98.6 bits (244), Expect = 1e-22
 Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 3/96 (3%)
 Frame = +2

Query: 38  YNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADIL 217
           +  LWLE DS+Y+V LLR +S+ VPWR  S W   +  +S+M+F VSHIFREGN  ADIL
Sbjct: 100 WTNLWLECDSLYLVTLLRTRSSYVPWRWKSSWLRCIERISKMNFRVSHIFREGNGVADIL 159

Query: 218 SK---SSQVDTWWGSPPTSIIQSLTQDYVGQSNYRF 316
           +    S Q  TWW S P+ I  +  +DY+G+S +RF
Sbjct: 160 ASRATSFQTSTWWHSTPSFIQDAFAKDYMGRSAFRF 195


>gb|PON53282.1| Ribonuclease H-like domain containing protein, partial [Trema
           orientalis]
          Length = 111

 Score = 95.1 bits (235), Expect = 2e-22
 Identities = 47/96 (48%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
 Frame = +2

Query: 38  YNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADIL 217
           +  LWLE DS Y+V LLR +S  VPWR    W   +  +S M+F VSHIFREGN  ADIL
Sbjct: 15  WTNLWLECDSSYLVTLLRARSPSVPWRWKPAWLRCIDRISNMNFHVSHIFREGNTVADIL 74

Query: 218 SK---SSQVDTWWGSPPTSIIQSLTQDYVGQSNYRF 316
           +    S Q  TWW S P+ I  + + D++GQS +RF
Sbjct: 75  ASRATSFQTSTWWHSTPSFIQDAFSTDFMGQSAFRF 110


>gb|PON85873.1| Ribonuclease H [Trema orientalis]
          Length = 302

 Score = 98.6 bits (244), Expect = 8e-22
 Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 3/96 (3%)
 Frame = +2

Query: 38  YNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADIL 217
           +  LWLE DS+Y+V LLR +S+ VPWR  S W   +  +S+M+F VSHIFREGN  ADIL
Sbjct: 206 WTNLWLECDSLYLVTLLRTRSSYVPWRWKSSWLRCIERISKMNFRVSHIFREGNGVADIL 265

Query: 218 SK---SSQVDTWWGSPPTSIIQSLTQDYVGQSNYRF 316
           +    S Q  TWW S P+ I  +  +DY+G+S +RF
Sbjct: 266 ASRATSFQTSTWWHSTPSFIQDAFAKDYMGRSAFRF 301


>gb|PON60250.1| Ribonuclease H-like domain containing protein, partial [Parasponia
           andersonii]
          Length = 137

 Score = 86.7 bits (213), Expect = 1e-18
 Identities = 43/96 (44%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
 Frame = +2

Query: 38  YNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADIL 217
           +N LWLESD  Y+V +L+  S  VPWR    W   L L+S++ F VSH+F EGN   DIL
Sbjct: 41  WNNLWLESDLAYLVLILKSHSLSVPWRWRPSWMRCLRLISKIHFHVSHVFCEGNVVVDIL 100

Query: 218 ---SKSSQVDTWWGSPPTSIIQSLTQDYVGQSNYRF 316
              + S Q  TWW + P+ I   + +DY G   YRF
Sbjct: 101 VSRATSIQAPTWWHTAPSFIHDVIKKDYSGLCGYRF 136


>gb|PON37013.1| Ribonuclease H, partial [Trema orientalis]
          Length = 179

 Score = 87.4 bits (215), Expect = 1e-18
 Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
 Frame = +2

Query: 38  YNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADIL 217
           +  LWLESDS Y+V LL+  S  VPWR    W   +  +S+M+F VSHIFREGN  A +L
Sbjct: 83  WKNLWLESDSSYLVTLLKAHSPSVPWRWKPSWLRCIDRISKMNFHVSHIFREGNSVAVLL 142

Query: 218 SK---SSQVDTWWGSPPTSIIQSLTQDYVGQSNYRF 316
           +    S Q  TWW   P+ I ++  +DY G+ N+ F
Sbjct: 143 ASGATSIQAPTWWHHTPSFIQEAFYKDYSGRCNFHF 178


>gb|POO02039.1| Ribonuclease H, partial [Trema orientalis]
          Length = 362

 Score = 86.3 bits (212), Expect = 7e-17
 Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
 Frame = +2

Query: 38  YNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADI- 214
           +  LWLE DS Y+V LLR++S  VPWR    W   +  +S+M+F VSHIFREGN  ADI 
Sbjct: 247 WTNLWLECDSTYLVTLLRERSPSVPWRWKPSWLRCMERISRMNFRVSHIFREGNAVADIS 306

Query: 215 --LSKSSQVDTWWGSPPTSIIQSLTQDYV 295
              + S Q  TWW S P+ I  + ++DY+
Sbjct: 307 ASRASSFQTSTWWHSIPSFIQNAFSKDYM 335


>gb|PRQ57777.1| putative ribonuclease H-like domain-containing protein [Rosa
           chinensis]
          Length = 182

 Score = 80.9 bits (198), Expect = 5e-16
 Identities = 44/97 (45%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
 Frame = +2

Query: 35  DYNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADI 214
           D+  +WLE DS  ++  LR     VPWR    W   LH +SQM F  SHIFREGNQAAD 
Sbjct: 86  DWKYVWLEVDSSLILIFLRFPHL-VPWRLRVQWSNCLHRISQMHFKSSHIFREGNQAADA 144

Query: 215 LSK---SSQVDTWWGSPPTSIIQSLTQDYVGQSNYRF 316
           L+    SS   TWW S P  ++    +D++G  N+RF
Sbjct: 145 LANYGASSDGFTWWDSTPDFMMSHCNRDHLGLPNFRF 181


>gb|PRQ23719.1| putative ribonuclease H-like domain-containing protein [Rosa
           chinensis]
          Length = 182

 Score = 80.9 bits (198), Expect = 5e-16
 Identities = 44/97 (45%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
 Frame = +2

Query: 35  DYNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADI 214
           D+  +WLE DS  ++  LR     VPWR    W   LH +SQM F  SHIFREGNQAAD 
Sbjct: 86  DWKYVWLEVDSSLILIFLRFPHL-VPWRLRVQWSNCLHRISQMHFKSSHIFREGNQAADA 144

Query: 215 LSK---SSQVDTWWGSPPTSIIQSLTQDYVGQSNYRF 316
           L+    SS   TWW S P  ++    +D++G  N+RF
Sbjct: 145 LANYGASSDGFTWWDSTPDFMMSHCNRDHLGLPNFRF 181


>gb|PON58619.1| Ribonuclease H-like domain containing protein [Parasponia
           andersonii]
          Length = 133

 Score = 79.0 bits (193), Expect = 9e-16
 Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
 Frame = +2

Query: 38  YNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADIL 217
           +  LW +SDS Y++ LLR+ S  VPW     W + +  +S+M+F VSHI+ EGN  ADIL
Sbjct: 44  WKHLWFKSDSSYLITLLREHSLFVPWSWKPSWLHCIDRISKMNFYVSHIYWEGNPVADIL 103

Query: 218 SK---SSQVDTWWGSPPTSIIQSLTQDYVG 298
           +    + Q  TWW + P+ I ++ ++DY G
Sbjct: 104 ASRVTNIQAPTWWHNTPSFIHKAFSKDYSG 133


>gb|PON43417.1| Ribonuclease H, partial [Parasponia andersonii]
          Length = 213

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
 Frame = +2

Query: 38  YNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADIL 217
           +  LWLESDS Y+V LLR +S  +PW     W   +  +S+M+F VS+IFREGN  ADIL
Sbjct: 118 WKHLWLESDSSYLVTLLRARSPSIPWHWKPSWLCYIDRISKMNFHVSYIFREGNPVADIL 177

Query: 218 SK---SSQVDTWWGSPPTSIIQSLTQDYVGQSNYRF 316
           +    S Q  TWW +  +S  ++ ++D  G+S +RF
Sbjct: 178 ASRATSIQAPTWWYNTLSS-HEAFSKDCSGRSTFRF 212


>gb|PON47283.1| Ribonuclease H, partial [Parasponia andersonii]
          Length = 204

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
 Frame = +2

Query: 38  YNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADIL 217
           +  LWLE+DSVY+V LL  +S  VP+R  S W  TL  ++ M FVV+HI+REGN+  D L
Sbjct: 109 WKHLWLENDSVYIVSLLLARSLKVPFRWKSTWCRTLRYITNMKFVVTHIYREGNRHTDSL 168

Query: 218 SK---SSQVDTWWGSPPTSIIQSLTQDYVGQSNYRF 316
           S    S     WW S  TS    +  DY+ + NYRF
Sbjct: 169 SSRIPSFVSPIWWWS-ATSFSFFVNDDYIAKFNYRF 203


>ref|XP_019430046.1| PREDICTED: uncharacterized protein LOC109337520, partial [Lupinus
           angustifolius]
          Length = 119

 Score = 77.4 bits (189), Expect = 2e-15
 Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
 Frame = +2

Query: 38  YNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADIL 217
           +N +WL+ +S  +V++   KS  VPW+  + W      LS M+F VSHI+REGN  AD L
Sbjct: 22  WNSIWLKCNSSLVVDIFNGKSK-VPWKLQARWTICKIHLSSMNFKVSHIYREGNACADSL 80

Query: 218 SK---SSQVDTWWGSPPTSIIQSLTQDYVGQSNYRFV 319
           +K   SS   TWW S PT I     ++++G  NYRF+
Sbjct: 81  AKFGISSNTYTWWNSIPTFIHSHFYRNWLGLPNYRFL 117


>gb|PON97562.1| Ribonuclease H-like domain containing protein [Trema orientalis]
          Length = 290

 Score = 80.9 bits (198), Expect = 3e-15
 Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
 Frame = +2

Query: 14  SITFLQGDYNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFRE 193
           SI F+ G +++ W+ESDS Y+V LL+ +S  VPW H + W + LH++  +   VSHI+RE
Sbjct: 189 SIAFVCG-WHRFWIESDSTYVVGLLKSRSKLVPWNHRNRWLHVLHMVHSIQIYVSHIYRE 247

Query: 194 GNQAADILSKSSQVDT-WWGSPPTSIIQSLTQDYVGQSNYRF 316
            NQ  D L+  +  D  WW   P  I   + +D+ G   Y F
Sbjct: 248 RNQVVDSLAFVTLEDNQWWSYAPDFIKSLVFRDFYGLDYYHF 289


>ref|XP_011465738.1| PREDICTED: uncharacterized protein LOC105351869 [Fragaria vesca
           subsp. vesca]
          Length = 348

 Score = 79.3 bits (194), Expect = 2e-14
 Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
 Frame = +2

Query: 47  LWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADILSK- 223
           LWLESDSV +V     +S   PW     W   L ++ QM+F  SHIFREGN  AD ++  
Sbjct: 255 LWLESDSVSVVACFSSRSFSPPWNLRVRWNNCLSIIRQMNFRYSHIFREGNMVADKMANL 314

Query: 224 --SSQVDTWWGSPPTSIIQSLTQDYVGQSNYRF 316
             S+   TW+ +PPT +   L  DY+G  NYRF
Sbjct: 315 GLSNASFTWYDNPPTELHGFLQADYLGIPNYRF 347


>gb|PON76913.1| Ribonuclease H-like domain containing protein [Parasponia
           andersonii]
          Length = 107

 Score = 74.7 bits (182), Expect = 2e-14
 Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = +2

Query: 38  YNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDF-VVSHIFREGNQAADI 214
           ++ L ++SDS Y + LL   S  VPW  LS W   LHLLS M F V+ H FREGNQ A  
Sbjct: 12  WSSLLIKSDSTYSLNLLSSHSETVPWCWLSRWLNCLHLLSSMQFQVLLHTFREGNQVAYC 71

Query: 215 LSKSSQVD-TWWGSPPTSIIQSLTQDYVGQSNYRF 316
           L+ ++ +D  WW   P  +   ++ D+ G   YRF
Sbjct: 72  LASTASMDFFWWNCCPDFLFSFVSIDFFGPGYYRF 106


>gb|PRQ42584.1| putative ribonuclease H-like domain-containing protein [Rosa
           chinensis]
          Length = 110

 Score = 72.4 bits (176), Expect = 2e-13
 Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
 Frame = +2

Query: 35  DYNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADI 214
           D+  +WLE DS  +++ LR  S  VPW+    W   L  +SQM+F  SHIFREGN  AD 
Sbjct: 14  DWKHVWLEVDSSLILDFLRSPSL-VPWQLRVQWNNCLFRISQMNFHSSHIFREGNHVADA 72

Query: 215 LSK---SSQVDTWWGSPPTSIIQSLTQDYVGQSNYR 313
           L+    SS    WW + P+ I  +  +D +G   YR
Sbjct: 73  LANYGTSSTDFVWWDTTPSFIASNCNEDRLGIPKYR 108


>gb|PRQ42881.1| putative ribonuclease H-like domain, reverse transcriptase
           zinc-binding domain-containing protein [Rosa chinensis]
          Length = 401

 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
 Frame = +2

Query: 5   CGP-SITFLQGDYNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSH 181
           C P  + F +G +  LWLESDS+ ++  L   S   PW     W+  L  + QM F  +H
Sbjct: 241 CQPLEVAFTRG-WTTLWLESDSISVLACLSSNSFSPPWDLRVRWQNCLKNIQQMQFRRTH 299

Query: 182 IFREGNQAADILSK---SSQVDTWWGSPPTSIIQSLTQDYVGQSNYRF 316
           IFREGN AAD ++    S    TW+ SPP  + + L  D++G  NYRF
Sbjct: 300 IFREGNAAADKMANLGVSKHSFTWYPSPPAELHRYLQADFLGLPNYRF 347


>ref|XP_019423006.1| PREDICTED: uncharacterized protein LOC109332480 [Lupinus
            angustifolius]
          Length = 1103

 Score = 76.3 bits (186), Expect = 4e-13
 Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
 Frame = +2

Query: 38   YNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREGNQAADIL 217
            +  LWLESDS  +V++ +  S   PW+  + W    H L  M+F ++HI+REGN  AD L
Sbjct: 1006 WRNLWLESDSTMVVDIFKNNSLP-PWKLFTAWNNCKHQLQSMNFHITHIYREGNSCADKL 1064

Query: 218  SK---SSQVDTWWGSPPTSIIQSLTQDYVGQSNYRF 316
            +    SSQ +T W S P  I +  +++ +G  NYRF
Sbjct: 1065 ASYGISSQENTIWNSAPLFIYEEFSRNRLGLPNYRF 1100


>ref|XP_024190007.1| uncharacterized protein LOC112193973 [Rosa chinensis]
          Length = 1248

 Score = 76.3 bits (186), Expect = 4e-13
 Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
 Frame = +2

Query: 17   ITFLQGDYNQLWLESDSVYMVELLRKKSTGVPWRHLSMWRYTLHLLSQMDFVVSHIFREG 196
            + F +G +  LWLESDS+ ++  L   S   PW     W+  L  + QM F  SHIFREG
Sbjct: 1144 VAFTRG-WTTLWLESDSISVLASLSSNSFSPPWDLRVRWQNCLKNIQQMQFRRSHIFREG 1202

Query: 197  NQAADILSK---SSQVDTWWGSPPTSIIQSLTQDYVGQSNYRF 316
            N AAD ++    S    TW+ SPP  + + L  D++G  NYRF
Sbjct: 1203 NVAADKMANLGVSKHSFTWYPSPPAELHRYLQADFLGLPNYRF 1245