BLASTX nr result
ID: Rehmannia29_contig00003870
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00003870
(437 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012829497.1| PREDICTED: sm-like protein LSM3A [Erythranth... 137 2e-39
ref|XP_022854862.1| sm-like protein LSM3A isoform X2 [Olea europ... 137 3e-39
ref|XP_012839233.1| PREDICTED: sm-like protein LSM3A [Erythranth... 137 3e-39
ref|XP_020083900.1| sm-like protein LSM3A [Ananas comosus] >gi|1... 135 1e-38
gb|EYU17441.1| hypothetical protein MIMGU_mgv1a015297mg [Erythra... 137 2e-38
ref|XP_011074758.1| sm-like protein LSM3A [Sesamum indicum] 135 2e-38
gb|PIM99001.1| Small nuclear ribonucleoprotein (snRNP) LSM3 [Han... 134 2e-38
ref|XP_011101520.1| sm-like protein LSM3A [Sesamum indicum] 134 2e-38
emb|CDP11392.1| unnamed protein product [Coffea canephora] 134 3e-38
gb|KHN15430.1| U6 snRNA-associated Sm-like protein LSm3 [Glycine... 134 3e-38
ref|XP_009402631.1| PREDICTED: sm-like protein LSM3B [Musa acumi... 134 3e-38
ref|XP_019465241.1| PREDICTED: sm-like protein LSM3B [Lupinus an... 134 5e-38
ref|XP_022773387.1| sm-like protein LSM3B [Durio zibethinus] 134 5e-38
gb|AFK35032.1| unknown [Lotus japonicus] >gi|388511495|gb|AFK438... 134 5e-38
ref|XP_004290522.1| PREDICTED: sm-like protein LSM3B [Fragaria v... 134 5e-38
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin... 134 5e-38
ref|XP_003607812.1| u6 snRNA-associated-like-Smprotein [Medicago... 134 5e-38
ref|XP_004513701.1| PREDICTED: sm-like protein LSM3A [Cicer arie... 134 5e-38
dbj|GAU51075.1| hypothetical protein TSUD_291110 [Trifolium subt... 134 6e-38
ref|XP_019199850.1| PREDICTED: sm-like protein LSM3B [Ipomoea nil] 133 7e-38
>ref|XP_012829497.1| PREDICTED: sm-like protein LSM3A [Erythranthe guttata]
Length = 97
Score = 137 bits (345), Expect = 2e-39
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = -3
Query: 435 HDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVIL 256
HDRELRGKLHAYDQHLNMILGDVEEIIT+VEIDDETYEEIVRTTKRTVPFLFVRGDGVIL
Sbjct: 30 HDRELRGKLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTKRTVPFLFVRGDGVIL 89
Query: 255 VSPPLRTA 232
VSPPLRTA
Sbjct: 90 VSPPLRTA 97
>ref|XP_022854862.1| sm-like protein LSM3A isoform X2 [Olea europaea var. sylvestris]
ref|XP_022894278.1| sm-like protein LSM3A [Olea europaea var. sylvestris]
Length = 97
Score = 137 bits (344), Expect = 3e-39
Identities = 66/68 (97%), Positives = 68/68 (100%)
Frame = -3
Query: 435 HDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVIL 256
HDRELRGKLHAYDQHLNMILGDVEEI+TSVEIDDETYEEIVRTT+RTVPFLFVRGDGVIL
Sbjct: 30 HDRELRGKLHAYDQHLNMILGDVEEIVTSVEIDDETYEEIVRTTRRTVPFLFVRGDGVIL 89
Query: 255 VSPPLRTA 232
VSPPLRTA
Sbjct: 90 VSPPLRTA 97
>ref|XP_012839233.1| PREDICTED: sm-like protein LSM3A [Erythranthe guttata]
ref|XP_012839234.1| PREDICTED: sm-like protein LSM3A [Erythranthe guttata]
gb|EYU36853.1| hypothetical protein MIMGU_mgv1a017018mg [Erythranthe guttata]
gb|EYU36854.1| hypothetical protein MIMGU_mgv1a017018mg [Erythranthe guttata]
Length = 97
Score = 137 bits (344), Expect = 3e-39
Identities = 66/68 (97%), Positives = 68/68 (100%)
Frame = -3
Query: 435 HDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVIL 256
HDRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVIL
Sbjct: 30 HDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVIL 89
Query: 255 VSPPLRTA 232
VSPPLRTA
Sbjct: 90 VSPPLRTA 97
>ref|XP_020083900.1| sm-like protein LSM3A [Ananas comosus]
gb|OAY70168.1| Sm-like protein LSM3B [Ananas comosus]
gb|OAY72633.1| Sm-like protein LSM3B [Ananas comosus]
Length = 97
Score = 135 bits (340), Expect = 1e-38
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = -3
Query: 435 HDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVIL 256
HDRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTT+RT+PFLFVRGDGVIL
Sbjct: 30 HDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTIPFLFVRGDGVIL 89
Query: 255 VSPPLRTA 232
VSPPLRTA
Sbjct: 90 VSPPLRTA 97
>gb|EYU17441.1| hypothetical protein MIMGU_mgv1a015297mg [Erythranthe guttata]
Length = 162
Score = 137 bits (345), Expect = 2e-38
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = -3
Query: 435 HDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVIL 256
HDRELRGKLHAYDQHLNMILGDVEEIIT+VEIDDETYEEIVRTTKRTVPFLFVRGDGVIL
Sbjct: 95 HDRELRGKLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTKRTVPFLFVRGDGVIL 154
Query: 255 VSPPLRTA 232
VSPPLRTA
Sbjct: 155 VSPPLRTA 162
>ref|XP_011074758.1| sm-like protein LSM3A [Sesamum indicum]
Length = 98
Score = 135 bits (339), Expect = 2e-38
Identities = 65/68 (95%), Positives = 68/68 (100%)
Frame = -3
Query: 435 HDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVIL 256
HDRELRGKLHAYDQHLNMILGDVEEIIT++EIDDETYEEIVRTT+RTVPFLFVRGDGVIL
Sbjct: 30 HDRELRGKLHAYDQHLNMILGDVEEIITTMEIDDETYEEIVRTTRRTVPFLFVRGDGVIL 89
Query: 255 VSPPLRTA 232
VSPPLRTA
Sbjct: 90 VSPPLRTA 97
>gb|PIM99001.1| Small nuclear ribonucleoprotein (snRNP) LSM3 [Handroanthus
impetiginosus]
Length = 97
Score = 134 bits (338), Expect = 2e-38
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = -3
Query: 435 HDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVIL 256
HDRELRGKLHAYDQHLNMILGDVEEI+T++EIDDETYEEIVRTT+RTVPFLFVRGDGVIL
Sbjct: 30 HDRELRGKLHAYDQHLNMILGDVEEIVTTMEIDDETYEEIVRTTRRTVPFLFVRGDGVIL 89
Query: 255 VSPPLRTA 232
VSPPLRTA
Sbjct: 90 VSPPLRTA 97
>ref|XP_011101520.1| sm-like protein LSM3A [Sesamum indicum]
Length = 97
Score = 134 bits (338), Expect = 2e-38
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = -3
Query: 435 HDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVIL 256
HDRELRGKLHAYDQHLNMILGDVEEI+T++EIDDETYEEIVRTT+RTVPFLFVRGDGVIL
Sbjct: 30 HDRELRGKLHAYDQHLNMILGDVEEIVTTLEIDDETYEEIVRTTRRTVPFLFVRGDGVIL 89
Query: 255 VSPPLRTA 232
VSPPLRTA
Sbjct: 90 VSPPLRTA 97
>emb|CDP11392.1| unnamed protein product [Coffea canephora]
Length = 98
Score = 134 bits (338), Expect = 3e-38
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = -3
Query: 435 HDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVIL 256
HDRELRGKLHAYDQHLNMILGDVEE++T+VEIDDETYEEIVRTTKR VPFLFVRGDGVIL
Sbjct: 31 HDRELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETYEEIVRTTKRNVPFLFVRGDGVIL 90
Query: 255 VSPPLRTA 232
VSPPLRTA
Sbjct: 91 VSPPLRTA 98
>gb|KHN15430.1| U6 snRNA-associated Sm-like protein LSm3 [Glycine soja]
gb|KRH70311.1| hypothetical protein GLYMA_02G082300 [Glycine max]
Length = 97
Score = 134 bits (337), Expect = 3e-38
Identities = 66/67 (98%), Positives = 67/67 (100%)
Frame = -3
Query: 432 DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 253
DRELRGKLHAYDQHLNMILGDVEEIIT+VEIDDETYEEIVRTTKRTVPFLFVRGDGVILV
Sbjct: 31 DRELRGKLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 90
Query: 252 SPPLRTA 232
SPPLRTA
Sbjct: 91 SPPLRTA 97
>ref|XP_009402631.1| PREDICTED: sm-like protein LSM3B [Musa acuminata subsp.
malaccensis]
Length = 97
Score = 134 bits (337), Expect = 3e-38
Identities = 66/67 (98%), Positives = 67/67 (100%)
Frame = -3
Query: 432 DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 253
DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTT+RTVPFLFVRGDGVILV
Sbjct: 31 DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTRRTVPFLFVRGDGVILV 90
Query: 252 SPPLRTA 232
SPPLRTA
Sbjct: 91 SPPLRTA 97
>ref|XP_019465241.1| PREDICTED: sm-like protein LSM3B [Lupinus angustifolius]
gb|OIV98878.1| hypothetical protein TanjilG_21709 [Lupinus angustifolius]
Length = 96
Score = 134 bits (336), Expect = 5e-38
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = -3
Query: 432 DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 253
DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVILV
Sbjct: 30 DRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 89
Query: 252 SPPLRTA 232
SPPLRTA
Sbjct: 90 SPPLRTA 96
>ref|XP_022773387.1| sm-like protein LSM3B [Durio zibethinus]
Length = 97
Score = 134 bits (336), Expect = 5e-38
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = -3
Query: 432 DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 253
DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVILV
Sbjct: 31 DRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 90
Query: 252 SPPLRTA 232
SPPLRTA
Sbjct: 91 SPPLRTA 97
>gb|AFK35032.1| unknown [Lotus japonicus]
gb|AFK43809.1| unknown [Lotus japonicus]
Length = 97
Score = 134 bits (336), Expect = 5e-38
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = -3
Query: 432 DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 253
DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVILV
Sbjct: 31 DRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 90
Query: 252 SPPLRTA 232
SPPLRTA
Sbjct: 91 SPPLRTA 97
>ref|XP_004290522.1| PREDICTED: sm-like protein LSM3B [Fragaria vesca subsp. vesca]
ref|XP_024162124.1| sm-like protein LSM3B [Rosa chinensis]
gb|PRQ24723.1| putative sm-like protein Lsm3 [Rosa chinensis]
Length = 97
Score = 134 bits (336), Expect = 5e-38
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = -3
Query: 432 DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 253
DRELRGKLHAYDQHLNMILGDVEEI+TSVEIDDETYEEIVRTTKRTVP+LFVRGDGVILV
Sbjct: 31 DRELRGKLHAYDQHLNMILGDVEEIVTSVEIDDETYEEIVRTTKRTVPYLFVRGDGVILV 90
Query: 252 SPPLRTA 232
SPPLRTA
Sbjct: 91 SPPLRTA 97
>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
ref|XP_014506299.1| sm-like protein LSM3A [Vigna radiata var. radiata]
ref|XP_017438868.1| PREDICTED: sm-like protein LSM3A [Vigna angularis]
ref|XP_020238104.1| sm-like protein LSM3A [Cajanus cajan]
gb|ACU13588.1| unknown [Glycine max]
gb|KHN41267.1| U6 snRNA-associated Sm-like protein LSm3 [Glycine soja]
gb|KOM55421.1| hypothetical protein LR48_Vigan10g131300 [Vigna angularis]
gb|KRH08702.1| hypothetical protein GLYMA_16G167900 [Glycine max]
dbj|BAU02053.1| hypothetical protein VIGAN_11146700 [Vigna angularis var.
angularis]
gb|KYP43948.1| U6 snRNA-associated Sm-like protein LSm3 [Cajanus cajan]
gb|PON76226.1| LSM domain/archaea-type [Parasponia andersonii]
gb|PON83050.1| LSM domain/archaea-type [Trema orientalis]
Length = 97
Score = 134 bits (336), Expect = 5e-38
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = -3
Query: 432 DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 253
DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVILV
Sbjct: 31 DRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 90
Query: 252 SPPLRTA 232
SPPLRTA
Sbjct: 91 SPPLRTA 97
>ref|XP_003607812.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
gb|AES90009.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
Length = 98
Score = 134 bits (336), Expect = 5e-38
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = -3
Query: 432 DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 253
DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVILV
Sbjct: 32 DRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 91
Query: 252 SPPLRTA 232
SPPLRTA
Sbjct: 92 SPPLRTA 98
>ref|XP_004513701.1| PREDICTED: sm-like protein LSM3A [Cicer arietinum]
Length = 98
Score = 134 bits (336), Expect = 5e-38
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = -3
Query: 432 DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 253
DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVILV
Sbjct: 32 DRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 91
Query: 252 SPPLRTA 232
SPPLRTA
Sbjct: 92 SPPLRTA 98
>dbj|GAU51075.1| hypothetical protein TSUD_291110 [Trifolium subterraneum]
Length = 101
Score = 134 bits (336), Expect = 6e-38
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = -3
Query: 432 DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 253
DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGVILV
Sbjct: 32 DRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 91
Query: 252 SPPLRTA 232
SPPLRTA
Sbjct: 92 SPPLRTA 98
>ref|XP_019199850.1| PREDICTED: sm-like protein LSM3B [Ipomoea nil]
Length = 97
Score = 133 bits (335), Expect = 7e-38
Identities = 64/67 (95%), Positives = 67/67 (100%)
Frame = -3
Query: 432 DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGVILV 253
DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRT+PFLFVRGDGVILV
Sbjct: 31 DRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTIPFLFVRGDGVILV 90
Query: 252 SPPLRTA 232
SPPLRTA
Sbjct: 91 SPPLRTA 97