BLASTX nr result
ID: Rehmannia29_contig00002855
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00002855
(965 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011097440.1| THO complex subunit 4D isoform X2 [Sesamum i... 79 5e-13
ref|XP_011097442.1| THO complex subunit 4D isoform X4 [Sesamum i... 78 5e-13
gb|PIM97885.1| RRM motif-containing protein [Handroanthus impeti... 78 9e-13
ref|XP_011097441.1| THO complex subunit 4D isoform X3 [Sesamum i... 77 2e-12
ref|XP_020554293.1| THO complex subunit 4D isoform X5 [Sesamum i... 76 2e-12
ref|XP_012845095.1| PREDICTED: THO complex subunit 4D [Erythrant... 77 2e-12
gb|KVI03114.1| Nucleotide-binding, alpha-beta plait [Cynara card... 75 4e-12
emb|CDP01629.1| unnamed protein product [Coffea canephora] 75 6e-12
ref|XP_022879682.1| THO complex subunit 4D-like isoform X2 [Olea... 74 1e-11
ref|XP_022893738.1| THO complex subunit 4D-like [Olea europaea v... 75 1e-11
ref|XP_022879681.1| THO complex subunit 4D-like isoform X1 [Olea... 74 1e-11
ref|XP_022894713.1| THO complex subunit 4D-like [Olea europaea v... 73 4e-11
gb|AAT08172.1| Hin19, partial [Nicotiana tabacum] 72 5e-11
ref|XP_019185424.1| PREDICTED: THO complex subunit 4D [Ipomoea nil] 72 1e-10
ref|XP_015058414.1| PREDICTED: THO complex subunit 4D [Solanum p... 70 4e-10
ref|XP_004250178.1| PREDICTED: THO complex subunit 4D [Solanum l... 70 4e-10
ref|XP_010553890.1| PREDICTED: THO complex subunit 4D-like [Tare... 70 5e-10
ref|XP_006364627.1| PREDICTED: THO complex subunit 4D [Solanum t... 70 5e-10
ref|XP_022846852.1| THO complex subunit 4D-like [Olea europaea v... 69 8e-10
ref|XP_016572541.1| PREDICTED: THO complex subunit 4D isoform X1... 69 1e-09
>ref|XP_011097440.1| THO complex subunit 4D isoform X2 [Sesamum indicum]
ref|XP_020554292.1| THO complex subunit 4D isoform X2 [Sesamum indicum]
Length = 275
Score = 78.6 bits (192), Expect = 5e-13
Identities = 36/45 (80%), Positives = 42/45 (93%)
Frame = +1
Query: 829 FCLHQSIRRTKNLPWQNGLFEDSLKAAGLSGLDAGTKLYISNLDV 963
+ + +SIRRTKNLPWQNGLFEDSLKAAGLSGL+ GT+LYISNL+V
Sbjct: 61 YTIAKSIRRTKNLPWQNGLFEDSLKAAGLSGLETGTRLYISNLEV 105
>ref|XP_011097442.1| THO complex subunit 4D isoform X4 [Sesamum indicum]
Length = 235
Score = 77.8 bits (190), Expect = 5e-13
Identities = 38/46 (82%), Positives = 42/46 (91%), Gaps = 3/46 (6%)
Frame = +1
Query: 835 LHQ---SIRRTKNLPWQNGLFEDSLKAAGLSGLDAGTKLYISNLDV 963
+HQ SIRRTKNLPWQNGLFEDSLKAAGLSGL+ GT+LYISNL+V
Sbjct: 20 IHQVSMSIRRTKNLPWQNGLFEDSLKAAGLSGLETGTRLYISNLEV 65
>gb|PIM97885.1| RRM motif-containing protein [Handroanthus impetiginosus]
Length = 274
Score = 77.8 bits (190), Expect = 9e-13
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +1
Query: 829 FCLHQSIRRTKNLPWQNGLFEDSLKAAGLSGLDAGTKLYISNLD 960
+ + +S RR KNLPWQNGLFEDSLKAAGLSGL+AGTKLYISNLD
Sbjct: 61 YTIAKSFRRAKNLPWQNGLFEDSLKAAGLSGLEAGTKLYISNLD 104
>ref|XP_011097441.1| THO complex subunit 4D isoform X3 [Sesamum indicum]
Length = 266
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/44 (79%), Positives = 41/44 (93%)
Frame = +1
Query: 829 FCLHQSIRRTKNLPWQNGLFEDSLKAAGLSGLDAGTKLYISNLD 960
+ + +SIRRTKNLPWQNGLFEDSLKAAGLSGL+ GT+LYISNL+
Sbjct: 61 YTIAKSIRRTKNLPWQNGLFEDSLKAAGLSGLETGTRLYISNLE 104
>ref|XP_020554293.1| THO complex subunit 4D isoform X5 [Sesamum indicum]
Length = 226
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/45 (82%), Positives = 41/45 (91%), Gaps = 3/45 (6%)
Frame = +1
Query: 835 LHQ---SIRRTKNLPWQNGLFEDSLKAAGLSGLDAGTKLYISNLD 960
+HQ SIRRTKNLPWQNGLFEDSLKAAGLSGL+ GT+LYISNL+
Sbjct: 20 IHQVSMSIRRTKNLPWQNGLFEDSLKAAGLSGLETGTRLYISNLE 64
>ref|XP_012845095.1| PREDICTED: THO complex subunit 4D [Erythranthe guttata]
gb|EYU30902.1| hypothetical protein MIMGU_mgv1a011416mg [Erythranthe guttata]
Length = 282
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = +1
Query: 841 QSIRRTKNLPWQNGLFEDSLKAAGLSGLDAGTKLYISNLDV 963
+S RRTKNLPWQNGLFED LKAAGLSGLDAGTKL ISNLDV
Sbjct: 70 KSFRRTKNLPWQNGLFEDGLKAAGLSGLDAGTKLSISNLDV 110
>gb|KVI03114.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 229
Score = 75.1 bits (183), Expect = 4e-12
Identities = 37/64 (57%), Positives = 42/64 (65%)
Frame = +1
Query: 772 IFFWSCADITFSPSRCMFWFCLHQSIRRTKNLPWQNGLFEDSLKAAGLSGLDAGTKLYIS 951
+ W AD+ P F C HQS RR KNLPWQ L E+SLKAAGL GLD G KLY+S
Sbjct: 7 LILWYYADMYLYPPGS-FLVCSHQSFRRPKNLPWQRDLLEESLKAAGLPGLDNGAKLYVS 65
Query: 952 NLDV 963
NLD+
Sbjct: 66 NLDI 69
>emb|CDP01629.1| unnamed protein product [Coffea canephora]
Length = 268
Score = 75.5 bits (184), Expect = 6e-12
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +1
Query: 844 SIRRTKNLPWQNGLFEDSLKAAGLSGLDAGTKLYISNLDV 963
S RRTKNLPWQ+GLFE+SLKAAGLSGLD GTKLY+SNLDV
Sbjct: 53 SFRRTKNLPWQSGLFEESLKAAGLSGLDNGTKLYVSNLDV 92
>ref|XP_022879682.1| THO complex subunit 4D-like isoform X2 [Olea europaea var.
sylvestris]
Length = 250
Score = 74.3 bits (181), Expect = 1e-11
Identities = 34/45 (75%), Positives = 39/45 (86%)
Frame = +1
Query: 829 FCLHQSIRRTKNLPWQNGLFEDSLKAAGLSGLDAGTKLYISNLDV 963
+ + +S RRTKNLPWQNGLFEDSL+ AGLSGL GTKLY+SNLDV
Sbjct: 60 YTIAKSFRRTKNLPWQNGLFEDSLRVAGLSGLANGTKLYVSNLDV 104
>ref|XP_022893738.1| THO complex subunit 4D-like [Olea europaea var. sylvestris]
Length = 278
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +1
Query: 829 FCLHQSIRRTKNLPWQNGLFEDSLKAAGLSGLDAGTKLYISNLDV 963
+ + +S+RRTKNLPWQNGLFED LKAAGLSGL+ GTKL+IS+LD+
Sbjct: 60 YTIAKSVRRTKNLPWQNGLFEDGLKAAGLSGLENGTKLFISHLDI 104
>ref|XP_022879681.1| THO complex subunit 4D-like isoform X1 [Olea europaea var.
sylvestris]
Length = 268
Score = 74.3 bits (181), Expect = 1e-11
Identities = 34/45 (75%), Positives = 39/45 (86%)
Frame = +1
Query: 829 FCLHQSIRRTKNLPWQNGLFEDSLKAAGLSGLDAGTKLYISNLDV 963
+ + +S RRTKNLPWQNGLFEDSL+ AGLSGL GTKLY+SNLDV
Sbjct: 60 YTIAKSFRRTKNLPWQNGLFEDSLRVAGLSGLANGTKLYVSNLDV 104
>ref|XP_022894713.1| THO complex subunit 4D-like [Olea europaea var. sylvestris]
Length = 270
Score = 73.2 bits (178), Expect = 4e-11
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +1
Query: 841 QSIRRTKNLPWQNGLFEDSLKAAGLSGLDAGTKLYISNLDV 963
+S RRTKNLPWQNGLFED L+AAGLSGL GTKLY+SNLD+
Sbjct: 64 KSFRRTKNLPWQNGLFEDGLRAAGLSGLANGTKLYVSNLDI 104
>gb|AAT08172.1| Hin19, partial [Nicotiana tabacum]
Length = 219
Score = 72.0 bits (175), Expect = 5e-11
Identities = 36/49 (73%), Positives = 42/49 (85%), Gaps = 3/49 (6%)
Frame = +1
Query: 826 WFCLHQSIRRTKNLPWQ--NGLFEDSLKAAGL-SGLDAGTKLYISNLDV 963
W C QS RRTKNLPWQ NGLFEDSL+AAG+ SGL++GTK+Y+SNLDV
Sbjct: 1 WACSLQSSRRTKNLPWQNGNGLFEDSLRAAGISSGLESGTKVYVSNLDV 49
>ref|XP_019185424.1| PREDICTED: THO complex subunit 4D [Ipomoea nil]
Length = 271
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/42 (80%), Positives = 40/42 (95%), Gaps = 1/42 (2%)
Frame = +1
Query: 841 QSIRRTKNLPWQNGLFEDSLKAAGL-SGLDAGTKLYISNLDV 963
+S RRTKNLPWQNGLFEDSL+AAGL SGL++G+KLY+SNLDV
Sbjct: 65 KSFRRTKNLPWQNGLFEDSLRAAGLSSGLESGSKLYVSNLDV 106
>ref|XP_015058414.1| PREDICTED: THO complex subunit 4D [Solanum pennellii]
Length = 282
Score = 70.5 bits (171), Expect = 4e-10
Identities = 33/46 (71%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = +1
Query: 829 FCLHQSIRRTKNLPWQNGLFEDSLKAAGLSG-LDAGTKLYISNLDV 963
+ + ++ RRTKNLPWQNGLFEDSL+AAGLS L++GTKLY+SNLDV
Sbjct: 66 YTIAKTFRRTKNLPWQNGLFEDSLRAAGLSSVLESGTKLYVSNLDV 111
>ref|XP_004250178.1| PREDICTED: THO complex subunit 4D [Solanum lycopersicum]
Length = 283
Score = 70.5 bits (171), Expect = 4e-10
Identities = 33/46 (71%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = +1
Query: 829 FCLHQSIRRTKNLPWQNGLFEDSLKAAGLSG-LDAGTKLYISNLDV 963
+ + ++ RRTKNLPWQNGLFEDSL+AAGLS L++GTKLY+SNLDV
Sbjct: 66 YTIAKTFRRTKNLPWQNGLFEDSLRAAGLSSVLESGTKLYVSNLDV 111
>ref|XP_010553890.1| PREDICTED: THO complex subunit 4D-like [Tarenaya hassleriana]
ref|XP_010553891.1| PREDICTED: THO complex subunit 4D-like [Tarenaya hassleriana]
Length = 277
Score = 70.1 bits (170), Expect = 5e-10
Identities = 29/44 (65%), Positives = 40/44 (90%)
Frame = +1
Query: 829 FCLHQSIRRTKNLPWQNGLFEDSLKAAGLSGLDAGTKLYISNLD 960
F +++S+RR +NLPWQN LFE+SL+AAG+SG+D GT+LYI+NLD
Sbjct: 60 FSINKSVRRVRNLPWQNDLFEESLRAAGVSGVDVGTRLYITNLD 103
>ref|XP_006364627.1| PREDICTED: THO complex subunit 4D [Solanum tuberosum]
ref|XP_006364628.1| PREDICTED: THO complex subunit 4D [Solanum tuberosum]
Length = 282
Score = 70.1 bits (170), Expect = 5e-10
Identities = 32/46 (69%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = +1
Query: 829 FCLHQSIRRTKNLPWQNGLFEDSLKAAGLSG-LDAGTKLYISNLDV 963
+ + ++ RRTKNLPWQNGLFEDSL+AAGLS L++GTKLY+SNLD+
Sbjct: 66 YTIAKTFRRTKNLPWQNGLFEDSLRAAGLSSVLESGTKLYVSNLDI 111
>ref|XP_022846852.1| THO complex subunit 4D-like [Olea europaea var. sylvestris]
Length = 271
Score = 69.3 bits (168), Expect = 8e-10
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +1
Query: 829 FCLHQSIRRTKNLPWQNGLFEDSLKAAGLSGLDAGTKLYISNLDV 963
+ + +S+RRT LPWQNGLFED LKAAG SGL+ GTK++ISNLD+
Sbjct: 60 YTIAKSVRRTNYLPWQNGLFEDGLKAAGFSGLENGTKIFISNLDI 104
>ref|XP_016572541.1| PREDICTED: THO complex subunit 4D isoform X1 [Capsicum annuum]
Length = 280
Score = 68.9 bits (167), Expect = 1e-09
Identities = 32/45 (71%), Positives = 40/45 (88%), Gaps = 1/45 (2%)
Frame = +1
Query: 829 FCLHQSIRRTKNLPWQNGLFEDSLKAAGLSG-LDAGTKLYISNLD 960
+ + ++ RRTKNLPWQNGLFEDSL+AAGLS L++GTKLY+SNLD
Sbjct: 66 YTIAKTFRRTKNLPWQNGLFEDSLRAAGLSSVLESGTKLYVSNLD 110